ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart24b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 204 bits (103), Expect = 2e-49 Identities = 151/167 (90%) Strand = Plus / Plus Query: 182 ggcggcgtcggatccgtcgatcctcgcctacgacgacttcgtcgccgacgccttcggccg 241 |||||||||||||||| ||||| | ||||||||||| |||||||||| ||| ||||||| Sbjct: 112351 ggcggcgtcggatccggcgatcgtggcctacgacgagttcgtcgccggggccgtcggccg 112410 Query: 242 cctcaacgccgcggcggagaagatcggcgggaaggtgctcgaggccaccagcgtcctcgc 301 ||||| ||||||||| ||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 112411 cctcaccgccgcggccgagaagatcggagggaaggtgctcgacgccaccaaggtcctcgc 112470 Query: 302 cgaggccttcgccatcgccaaggacctcctcgtccaggccaagcagc 348 ||||||||||||| || ||||||||| |||||||||||||||||||| Sbjct: 112471 cgaggccttcgccgtctccaaggaccgcctcgtccaggccaagcagc 112517 Score = 127 bits (64), Expect = 4e-26 Identities = 130/152 (85%) Strand = Plus / Plus Query: 353 gaaacctgcgtcaatggctaatgctcaggatttcttcaagcctctaaatgatactattgc 412 ||||||||| ||||||||| |||| || || ||||| ||||| || |||||| |||||| Sbjct: 113000 gaaacctgcatcaatggctgatgcacaagacttctttaagccgctgaatgatgttattgc 113059 Query: 413 gaaagcaaccgctatgacggaaggaaggaggcccgactattttaatcatatgaagagtgt 472 |||||||| || ||||| |||||||||||||| |||||||| || ||||| |||||||| Sbjct: 113060 gaaagcaattgcgatgactgaaggaaggaggcctgactatttcaaccatatcaagagtgt 113119 Query: 473 tgccgacagtctcgctgccctggcttgggttg 504 ||||||||||||| |||| |||| ||||||| Sbjct: 113120 tgccgacagtctcactgctttggcgtgggttg 113151 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 77 cgccatggagaaggcgctcgtcgagcggctcgaggccgcggtggcgcgcctcgaggccg 135 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 112225 cgccatggagaaggcgctcgtggagcggctggaggcggcggtggcgcgcctcgaggccg 112283
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 151/167 (90%) Strand = Plus / Minus Query: 182 ggcggcgtcggatccgtcgatcctcgcctacgacgacttcgtcgccgacgccttcggccg 241 |||||||||||||||| ||||| | ||||||||||| |||||||||| ||| ||||||| Sbjct: 29026940 ggcggcgtcggatccggcgatcgtggcctacgacgagttcgtcgccggggccgtcggccg 29026881 Query: 242 cctcaacgccgcggcggagaagatcggcgggaaggtgctcgaggccaccagcgtcctcgc 301 ||||| ||||||||| ||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 29026880 cctcaccgccgcggccgagaagatcggagggaaggtgctcgacgccaccaaggtcctcgc 29026821 Query: 302 cgaggccttcgccatcgccaaggacctcctcgtccaggccaagcagc 348 ||||||||||||| || ||||||||| |||||||||||||||||||| Sbjct: 29026820 cgaggccttcgccgtctccaaggaccgcctcgtccaggccaagcagc 29026774 Score = 127 bits (64), Expect = 4e-26 Identities = 130/152 (85%) Strand = Plus / Minus Query: 353 gaaacctgcgtcaatggctaatgctcaggatttcttcaagcctctaaatgatactattgc 412 ||||||||| ||||||||| |||| || || ||||| ||||| || |||||| |||||| Sbjct: 29026291 gaaacctgcatcaatggctgatgcacaagacttctttaagccgctgaatgatgttattgc 29026232 Query: 413 gaaagcaaccgctatgacggaaggaaggaggcccgactattttaatcatatgaagagtgt 472 |||||||| || ||||| |||||||||||||| |||||||| || ||||| |||||||| Sbjct: 29026231 gaaagcaattgcgatgactgaaggaaggaggcctgactatttcaaccatatcaagagtgt 29026172 Query: 473 tgccgacagtctcgctgccctggcttgggttg 504 ||||||||||||| |||| |||| ||||||| Sbjct: 29026171 tgccgacagtctcactgctttggcgtgggttg 29026140 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 77 cgccatggagaaggcgctcgtcgagcggctcgaggccgcggtggcgcgcctcgaggccg 135 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 29027066 cgccatggagaaggcgctcgtggagcggctggaggcggcggtggcgcgcctcgaggccg 29027008
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 151/167 (90%) Strand = Plus / Minus Query: 182 ggcggcgtcggatccgtcgatcctcgcctacgacgacttcgtcgccgacgccttcggccg 241 |||||||||||||||| ||||| | ||||||||||| |||||||||| ||| ||||||| Sbjct: 29118362 ggcggcgtcggatccggcgatcgtggcctacgacgagttcgtcgccggggccgtcggccg 29118303 Query: 242 cctcaacgccgcggcggagaagatcggcgggaaggtgctcgaggccaccagcgtcctcgc 301 ||||| ||||||||| ||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 29118302 cctcaccgccgcggccgagaagatcggagggaaggtgctcgacgccaccaaggtcctcgc 29118243 Query: 302 cgaggccttcgccatcgccaaggacctcctcgtccaggccaagcagc 348 ||||||||||||| || ||||||||| |||||||||||||||||||| Sbjct: 29118242 cgaggccttcgccgtctccaaggaccgcctcgtccaggccaagcagc 29118196 Score = 127 bits (64), Expect = 4e-26 Identities = 130/152 (85%) Strand = Plus / Minus Query: 353 gaaacctgcgtcaatggctaatgctcaggatttcttcaagcctctaaatgatactattgc 412 ||||||||| ||||||||| |||| || || ||||| ||||| || |||||| |||||| Sbjct: 29117713 gaaacctgcatcaatggctgatgcacaagacttctttaagccgctgaatgatgttattgc 29117654 Query: 413 gaaagcaaccgctatgacggaaggaaggaggcccgactattttaatcatatgaagagtgt 472 |||||||| || ||||| |||||||||||||| |||||||| || ||||| |||||||| Sbjct: 29117653 gaaagcaattgcgatgactgaaggaaggaggcctgactatttcaaccatatcaagagtgt 29117594 Query: 473 tgccgacagtctcgctgccctggcttgggttg 504 ||||||||||||| |||| |||| ||||||| Sbjct: 29117593 tgccgacagtctcactgctttggcgtgggttg 29117562 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 77 cgccatggagaaggcgctcgtcgagcggctcgaggccgcggtggcgcgcctcgaggccg 135 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 29118488 cgccatggagaaggcgctcgtggagcggctggaggcggcggtggcgcgcctcgaggccg 29118430
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 cgacttcgtcgccgacgccttcg 237 ||||||||||||||||||||||| Sbjct: 242914 cgacttcgtcgccgacgccttcg 242936
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 127 tcgaggccgtcgccgcgtcgggggcctcggc 157 ||||||||||||||||| |||||||| |||| Sbjct: 3581785 tcgaggccgtcgccgcgacgggggccccggc 3581755
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 cgacttcgtcgccgacgccttcg 237 ||||||||||||||||||||||| Sbjct: 808966 cgacttcgtcgccgacgccttcg 808944
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 aggcgctcgtcgagcggctcga 109 |||||||||||||||||||||| Sbjct: 2862693 aggcgctcgtcgagcggctcga 2862672 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcgctcgtcgagcggctcg 108 |||||||||||||||||||| Sbjct: 3089667 ggcgctcgtcgagcggctcg 3089648
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 aggcgctcgtcgagcggctcga 109 |||||||||||||||||||||| Sbjct: 245607 aggcgctcgtcgagcggctcga 245628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tcgaggccgtcgccgcgtcg 146 |||||||||||||||||||| Sbjct: 291057 tcgaggccgtcgccgcgtcg 291038 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggcgctcgtcgagcggctcg 108 |||||||||||||||||||| Sbjct: 144417 ggcgctcgtcgagcggctcg 144436
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 aggcgctcgtcgagcggctcga 109 |||||||||||||||||||||| Sbjct: 22901 aggcgctcgtcgagcggctcga 22922 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggcgctcgtcgagcggctcg 108 |||||||||||||||||||| Sbjct: 3996032 ggcgctcgtcgagcggctcg 3996051 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tcgaggccgtcgccgcgtcg 146 |||||||||||||||||||| Sbjct: 68348 tcgaggccgtcgccgcgtcg 68329
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 gcgcgcctcgaggccgtcgccg 141 |||||||||||||||||||||| Sbjct: 20921038 gcgcgcctcgaggccgtcgccg 20921059 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tcctcgccgaggccttcgcc 314 |||||||||||||||||||| Sbjct: 1735345 tcctcgccgaggccttcgcc 1735364
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 ctacgacgacttcgtcgccgac 230 |||||||||||||||||||||| Sbjct: 2622789 ctacgacgacttcgtcgccgac 2622810 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ccgcggtggcgcgcctcgaggccgtcgcc 140 ||||||||||||||| ||| ||||||||| Sbjct: 1032977 ccgcggtggcgcgccgcgacgccgtcgcc 1032949
>gb|AF110185.1|AF110185 Burkholderia pseudomallei strain 1026b DbhB (dbhB), general secretory pathway protein D (gspD), general secretory pathway protein E (gspE), general secretory pathway protein F (gspF), GspC (gspC), general secretory pathway protein G (gspG), general secretory pathway protein H (gspH), general secretory pathway protein I (gspI), general secretory pathway protein J (gspJ), general secretory pathway protein K (gspK), general secretory pathway protein L (gspL), general secretory pathway protein M (gspM), and general secretory pathway protein N (gspN) genes, complete cds; and unknown genes Length = 20302 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 aggcgctcgtcgagcggctcga 109 |||||||||||||||||||||| Sbjct: 18026 aggcgctcgtcgagcggctcga 18047
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 gcgcgcctcgaggccgtcgccg 141 |||||||||||||||||||||| Sbjct: 20847252 gcgcgcctcgaggccgtcgccg 20847273 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tcctcgccgaggccttcgcc 314 |||||||||||||||||||| Sbjct: 1735321 tcctcgccgaggccttcgcc 1735340
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 gcgcgcctcgaggccgtcgccg 141 |||||||||||||||||||||| Sbjct: 6528 gcgcgcctcgaggccgtcgccg 6549
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 gcgcgcctcgaggccgtcgccg 141 |||||||||||||||||||||| Sbjct: 37957 gcgcgcctcgaggccgtcgccg 37936
>ref|XM_466204.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1965 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gccgcggtggcgcgcctcgag 131 ||||||||||||||||||||| Sbjct: 430 gccgcggtggcgcgcctcgag 450
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 gacgacttcgtcgccgacgcc 233 ||||||||||||||||||||| Sbjct: 1397229 gacgacttcgtcgccgacgcc 1397209
>gb|AY344436.1| Unidentified bacterium clone L8-46 16S ribosomal RNA gene, partial sequence Length = 972 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ccttcggccgcctcaacgccgcggc 256 |||||||| |||||||||||||||| Sbjct: 149 ccttcggcggcctcaacgccgcggc 173
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 ttcgtcgccgacgccttcggc 239 ||||||||||||||||||||| Sbjct: 825870 ttcgtcgccgacgccttcggc 825850
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gccgaggccttcgccatcgcc 320 ||||||||||||||||||||| Sbjct: 2401 gccgaggccttcgccatcgcc 2421
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gccgaggccttcgccatcgcc 320 ||||||||||||||||||||| Sbjct: 75841 gccgaggccttcgccatcgcc 75861
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 gccgaggccttcgccatcgcc 320 ||||||||||||||||||||| Sbjct: 296391 gccgaggccttcgccatcgcc 296371
>dbj|AK163237.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020004O10 product:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide, full insert sequence Length = 1212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cctcgcctcgccatggagaag 89 ||||||||||||||||||||| Sbjct: 61 cctcgcctcgccatggagaag 81
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gccgcggtggcgcgcctcgag 131 ||||||||||||||||||||| Sbjct: 21035718 gccgcggtggcgcgcctcgag 21035698
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ctcgtcgagcggctcgaggccgcgg 117 |||| |||||||||||||||||||| Sbjct: 1004358 ctcggcgagcggctcgaggccgcgg 1004334 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcgctcgtcgagcggctcg 108 |||||||||||||||||||| Sbjct: 3696758 ggcgctcgtcgagcggctcg 3696739 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 90 gcgctcgtcgagcggctcgaggccgcggtggc 121 ||||||| || ||||||||||| ||||||||| Sbjct: 3119636 gcgctcgccgcgcggctcgaggacgcggtggc 3119667
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 acgacgacttcgtcgccgacg 231 ||||||||||||||||||||| Sbjct: 3352767 acgacgacttcgtcgccgacg 3352787
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cgacttcgtcgccgacgcctt 235 ||||||||||||||||||||| Sbjct: 1721406 cgacttcgtcgccgacgcctt 1721426
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gccgcggtggcgcgcctcgag 131 ||||||||||||||||||||| Sbjct: 37463 gccgcggtggcgcgcctcgag 37443
>gb|AE010319.1| Methanopyrus kandleri AV19 section 18 of 157 of the complete genome Length = 10699 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgcgacctcgggggcgccct 181 |||||||||||||||||||| Sbjct: 4850 cgcgacctcgggggcgccct 4831
>ref|XM_550453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4057 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 153 ctccctcgcctcgcctcgcc 172
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 314 catcgccaaggacctcctcgtccaggcc 341 |||||||||||| |||||| |||||||| Sbjct: 898707 catcgccaaggaactcctcttccaggcc 898680
>ref|XM_483607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cgtcgagcggctcgaggccg 114 |||||||||||||||||||| Sbjct: 426 cgtcgagcggctcgaggccg 445
>ref|XM_479829.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1370 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcgccctggcggcgtcgga 193 |||||||||||||||||||| Sbjct: 817 ggcgccctggcggcgtcgga 798
>ref|XM_507104.1| PREDICTED Oryza sativa (japonica cultivar-group), B1203H11.11 mRNA Length = 1406 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcgccctggcggcgtcgga 193 |||||||||||||||||||| Sbjct: 816 ggcgccctggcggcgtcgga 797
>gb|AE009237.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 7 of 187 of the complete sequence Length = 13189 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ggccttcgccatcgccaagg 324 |||||||||||||||||||| Sbjct: 11351 ggccttcgccatcgccaagg 11370
>gb|AE008376.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 180 of 187 of the complete sequence Length = 14031 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ggccttcgccatcgccaagg 324 |||||||||||||||||||| Sbjct: 6967 ggccttcgccatcgccaagg 6948
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tcgccatcgccaaggacctc 329 |||||||||||||||||||| Sbjct: 4729010 tcgccatcgccaaggacctc 4728991
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 acgacgacttcgtcgccgac 230 |||||||||||||||||||| Sbjct: 104367 acgacgacttcgtcgccgac 104386
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 tcgaggccgcggtggcgcgc 125 |||||||||||||||||||| Sbjct: 2760054 tcgaggccgcggtggcgcgc 2760073
>gb|AC146592.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0010P23 PCR product, complete sequence Length = 19234 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcgccgacgccttcggccgc 242 |||||||||||||||||||| Sbjct: 12177 tcgccgacgccttcggccgc 12196
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 acgccttcggccgcctcaacgccg 252 |||||||||| ||||||||||||| Sbjct: 386248 acgccttcggacgcctcaacgccg 386225
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 cctacgacgacttcgtcgcc 227 |||||||||||||||||||| Sbjct: 691510 cctacgacgacttcgtcgcc 691491
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 acgccgcggcggagaagatcggcg 270 |||||||||||||| ||||||||| Sbjct: 1381599 acgccgcggcggaggagatcggcg 1381622
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 gacttcgtcgccgacgccttcggc 239 |||||||||||||| ||||||||| Sbjct: 302637 gacttcgtcgccgaagccttcggc 302614
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 gacttcgtcgccgacgccttcggc 239 |||||||||||||| ||||||||| Sbjct: 221523 gacttcgtcgccgaagccttcggc 221500
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tcgccgcgtcgggggcctcg 155 |||||||||||||||||||| Sbjct: 86200 tcgccgcgtcgggggcctcg 86181 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccgacgccttcggccgcctc 245 |||||||||||||||||||| Sbjct: 75273 ccgacgccttcggccgcctc 75292
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccgcctcaacgccgcggcgg 258 |||||||||||||||||||| Sbjct: 70067 ccgcctcaacgccgcggcgg 70048
>emb|AL672112.1|MLO672112 Mesorhizobium loti R7A symbiosis island; segment 1/4 Length = 150050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tcggcatcgcgcgacctcgg 172 |||||||||||||||||||| Sbjct: 72563 tcggcatcgcgcgacctcgg 72544
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gccgacgccttcggccgcct 244 |||||||||||||||||||| Sbjct: 1831114 gccgacgccttcggccgcct 1831133
>gb|AE011951.1| Xanthomonas axonopodis pv. citri str. 306, section 329 of 469 of the complete genome Length = 9943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gccgacgccttcggccgcct 244 |||||||||||||||||||| Sbjct: 7124 gccgacgccttcggccgcct 7105
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 cggtggcgcgcctcgaggccgtcgccgc 142 ||||||| |||| ||||||||||||||| Sbjct: 553969 cggtggcccgccgcgaggccgtcgccgc 553942
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 acgacgacttcgtcgccgac 230 |||||||||||||||||||| Sbjct: 103629 acgacgacttcgtcgccgac 103648
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgcctcgaggccgtcgccgc 142 |||||||||||||||||||| Sbjct: 3743159 cgcctcgaggccgtcgccgc 3743140
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcgccgacgccttcggccgc 242 |||||||||||||||||||| Sbjct: 25681967 tcgccgacgccttcggccgc 25681986
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cgtcgagcggctcgaggccg 114 |||||||||||||||||||| Sbjct: 27216292 cgtcgagcggctcgaggccg 27216273 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcgccctggcggcgtcgga 193 |||||||||||||||||||| Sbjct: 1122129 ggcgccctggcggcgtcgga 1122148
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 402876 ctccctcgcctcgcctcgcc 402895
>gb|AF419182.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 713 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 636 ctccctcgcctcgcctcgcc 655
>gb|AF419181.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 711 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 634 ctccctcgcctcgcctcgcc 653
>gb|AF419180.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 713 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 636 ctccctcgcctcgcctcgcc 655
>gb|AF419179.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 714 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 637 ctccctcgcctcgcctcgcc 656
>gb|AF419178.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 635 ctccctcgcctcgcctcgcc 654
>gb|AF419177.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 711 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 634 ctccctcgcctcgcctcgcc 653
>gb|AF419176.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 635 ctccctcgcctcgcctcgcc 654
>gb|AF419175.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 711 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 634 ctccctcgcctcgcctcgcc 653
>gb|AF419174.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 713 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 636 ctccctcgcctcgcctcgcc 655
>gb|AF419173.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 711 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 634 ctccctcgcctcgcctcgcc 653
>gb|AF419172.1| Galium aparine 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 713 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 636 ctccctcgcctcgcctcgcc 655
>gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cgactattttaatcatatga 465 |||||||||||||||||||| Sbjct: 158973 cgactattttaatcatatga 158954
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcgccgacgccttcggccgc 242 |||||||||||||||||||| Sbjct: 528696 tcgccgacgccttcggccgc 528715
>gb|AE004796.1| Pseudomonas aeruginosa PAO1, section 357 of 529 of the complete genome Length = 12098 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cgccgacgccttcggccgcc 243 |||||||||||||||||||| Sbjct: 10444 cgccgacgccttcggccgcc 10463
>gb|AE004603.1| Pseudomonas aeruginosa PAO1, section 164 of 529 of the complete genome Length = 11274 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cgatcctcgcctacgacgac 218 |||||||||||||||||||| Sbjct: 5920 cgatcctcgcctacgacgac 5901
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcgccctggcggcgtcgga 193 |||||||||||||||||||| Sbjct: 35366 ggcgccctggcggcgtcgga 35385
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gccgcggcggagaagatcgg 268 |||||||||||||||||||| Sbjct: 1498913 gccgcggcggagaagatcgg 1498894
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 112829 ctccctcgcctcgcctcgcc 112848
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cgtcgagcggctcgaggccg 114 |||||||||||||||||||| Sbjct: 117325 cgtcgagcggctcgaggccg 117306
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cgtcgagcggctcgaggccg 114 |||||||||||||||||||| Sbjct: 39495 cgtcgagcggctcgaggccg 39476
>dbj|AK121062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058K01, full insert sequence Length = 3325 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 151 ctccctcgcctcgcctcgcc 170
>dbj|AK104952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D12, full insert sequence Length = 1405 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcgccctggcggcgtcgga 193 |||||||||||||||||||| Sbjct: 816 ggcgccctggcggcgtcgga 797
>dbj|AK072638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132J12, full insert sequence Length = 4058 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctccctcgcctcgcctcgcc 80 |||||||||||||||||||| Sbjct: 153 ctccctcgcctcgcctcgcc 172
>dbj|AK069887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038B06, full insert sequence Length = 1370 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcgccctggcggcgtcgga 193 |||||||||||||||||||| Sbjct: 817 ggcgccctggcggcgtcgga 798
>dbj|AK064725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-G12, full insert sequence Length = 1598 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcgccgacgccttcggccgc 242 |||||||||||||||||||| Sbjct: 302 tcgccgacgccttcggccgc 321
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gccgacgccttcggccgcct 244 |||||||||||||||||||| Sbjct: 1852231 gccgacgccttcggccgcct 1852250
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcgctcgtcgagcggctcg 108 |||||||||||||||||||| Sbjct: 3704963 ggcgctcgtcgagcggctcg 3704944 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcgctcgtcgagcggctcga 109 |||||||||||||||||||| Sbjct: 22725 gcgctcgtcgagcggctcga 22744
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 cgacgccttcggccgcctcaacgc 250 |||||||||||||||| ||||||| Sbjct: 1078381 cgacgccttcggccgcatcaacgc 1078404
>dbj|AB086412.1| Thermus thermophilus putative ycgN, gdhA-1, gdhA-2, orfA, orfB, orfC, orfD, orfE, dhs genes, partial and complete cds Length = 5577 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gccgcggcggagaagatcgg 268 |||||||||||||||||||| Sbjct: 2218 gccgcggcggagaagatcgg 2237
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 cttcgtcgccgacgccttcggccgcctc 245 ||||| ||||| |||||||||||||||| Sbjct: 2325955 cttcgacgccggcgccttcggccgcctc 2325982
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcgccgacgccttcggccgc 242 |||||||||||||||||||| Sbjct: 26000637 tcgccgacgccttcggccgc 26000656
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tcctcgccgaggccttcgcc 314 |||||||||||||||||||| Sbjct: 105139 tcctcgccgaggccttcgcc 105120
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tcctcgccgaggccttcgcc 314 |||||||||||||||||||| Sbjct: 31576 tcctcgccgaggccttcgcc 31557
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gccgcggcggagaagatcgg 268 |||||||||||||||||||| Sbjct: 1173573 gccgcggcggagaagatcgg 1173554
>gb|U33419.1|OVU33419 Orf virus RNA polymerase subunit (ORF-RPA) gene, complete cds Length = 5261 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 acgacgacttcgtcgccgac 230 |||||||||||||||||||| Sbjct: 2631 acgacgacttcgtcgccgac 2650
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tcgccgacgccttcggccgc 242 |||||||||||||||||||| Sbjct: 36162 tcgccgacgccttcggccgc 36143 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,009,839 Number of Sequences: 3902068 Number of extensions: 4009839 Number of successful extensions: 81778 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76062 Number of HSP's gapped (non-prelim): 5716 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
