ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
2dbj|AP005634.3| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
3dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
4dbj|AK105442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
5dbj|AK072803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
6gb|BT018949.1| Zea mays clone Contig108.F mRNA sequence 54 4e-04
7gb|AY281356.1| Uncultured Acidobacteria bacterium clone 41b15 ge... 48 0.028
8gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosom... 48 0.028
9gb|BT017968.1| Zea mays clone EL01N0523G07.c mRNA sequence 46 0.11
10gb|AC121589.3| Mus musculus BAC clone RP23-281G14 from chromosom... 46 0.11
11gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosom... 44 0.43
12gb|BC008545.1| Mus musculus WD repeat domain 23, mRNA (cDNA clon... 44 0.43
13ref|NM_133734.2| Mus musculus WD repeat domain 23 (Wdr23), mRNA 44 0.43
14emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chr... 44 0.43
15gb|BC021305.1| Mus musculus WD repeat domain 23, mRNA (cDNA clon... 44 0.43
16gb|AC098736.4| Mus musculus BAC clone RP23-122B3 from 1, complet... 44 0.43
17gb|BC037001.1| Mus musculus WD repeat domain 23, mRNA (cDNA clon... 44 0.43
18dbj|AK152395.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.43
19dbj|AK150183.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.43
20dbj|AK158784.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 44 0.43
21dbj|AK170657.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.43
22dbj|AK033540.1| Mus musculus adult male colon cDNA, RIKEN full-l... 44 0.43
23emb|BX813336.4| Mouse DNA sequence from clone RP23-207B5 on chro... 44 0.43
24dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
25gb|AC155840.8| Mus musculus 6 BAC RP24-223C8 (Roswell Park Cance... 44 0.43
26dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
27emb|BX465216.5| Mouse DNA sequence from clone RP23-282I18 on chr... 44 0.43
28gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome... 44 0.43
29gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complet... 44 0.43
30gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, com... 44 0.43
31gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosom... 42 1.7
32ref|XM_880642.1| PREDICTED: Bos taurus similar to CDK5 regulator... 42 1.7
33ref|XM_880617.1| PREDICTED: Bos taurus similar to CDK5 regulator... 42 1.7
34ref|XM_880572.1| PREDICTED: Bos taurus similar to CDK5 regulator... 42 1.7
35ref|XM_867616.1| PREDICTED: Bos taurus similar to CDK5 regulator... 42 1.7
36gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, comp... 42 1.7
37gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, com... 42 1.7
38gb|AC124580.5| Mus musculus BAC clone RP23-114G7 from chromosome... 42 1.7
39gb|AC098798.4| Homo sapiens chromosome 4 clone RP11-579K7, compl... 42 1.7
40gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, compl... 42 1.7
41gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, com... 42 1.7
42gb|AC164572.4| Mus musculus 6 BAC RP24-89J17 (Roswell Park Cance... 42 1.7
43gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosom... 42 1.7
44emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in... 42 1.7
45dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
46emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in ... 42 1.7
47emb|AL954720.14| Mouse DNA sequence from clone RP23-58C21 on chr... 42 1.7
48gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, compl... 42 1.7
49gb|AC155326.8| Mus musculus 6 BAC RP24-72P18 (Roswell Park Cance... 42 1.7
50gb|AC162441.11| Mus musculus chromosome 1, clone RP23-2E23, comp... 42 1.7
51gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, compl... 40 6.7
52ref|XM_477207.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
53ref|NM_186191.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
54gb|AY803087.1| Sus scrofa chromosome 17 clone pkmCon13, mRNA seq... 40 6.7
55gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 6.7
56gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, comp... 40 6.7
57gb|AC146879.2| Otolemur garnettii clone CH256-29L3, complete seq... 40 6.7
58ref|XM_417464.1| PREDICTED: Gallus gallus similar to CDK5 regula... 40 6.7
59ref|XM_614891.2| PREDICTED: Bos taurus similar to Huntingtin-int... 40 6.7
60gb|AC154670.2| Mus musculus BAC clone RP24-293L9 from chromosome... 40 6.7
61gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, co... 40 6.7
62gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome... 40 6.7
63gb|AC118281.4| Homo sapiens BAC clone RP11-1244E8 from 4, comple... 40 6.7
64gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome... 40 6.7
65gb|AC018360.16| Homo sapiens 3 BAC RP11-67D16 (Roswell Park Canc... 40 6.7
66gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, comple... 40 6.7
67gb|AC121865.2| Mus musculus BAC clone RP24-112O1 from 8, complet... 40 6.7
68gb|AC116578.3| Mus musculus BAC clone RP23-264P8 from 9, complet... 40 6.7
69gb|AC114987.10| Mus musculus chromosome 3, clone RP23-81D7, comp... 40 6.7
70gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, c... 40 6.7
71gb|AC158913.4| Mus musculus chromosome 5, clone RP24-268J3, comp... 40 6.7
72gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.7
73emb|AL354749.6| Human DNA sequence from clone RP11-156D10 on chr... 40 6.7
74emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.7
75emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 40 6.7
76emb|AL021127.2|MMCMX137 Mus musculus chromosome X contigA; putat... 40 6.7
77dbj|AK141560.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 6.7
78gb|AC099685.2| Homo sapiens chromosome 8, clone RP11-87N16, comp... 40 6.7
79gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, comp... 40 6.7
80dbj|AK157082.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.7
81gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, compl... 40 6.7
82gb|BC036726.1| Mus musculus paraneoplastic antigen MA3, mRNA (cD... 40 6.7
83gb|S47405.1| glycine-rich protein {clone atGRP-1} [Arabidopsis t... 40 6.7
84gb|AC151769.3| Mus musculus BAC clone RP24-375O19 from chromosom... 40 6.7
85gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, co... 40 6.7
86emb|BX813330.7| Mouse DNA sequence from clone RP23-11C16 on chro... 40 6.7
87gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O... 40 6.7
88dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
89gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I1... 40 6.7
90gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome... 40 6.7
91gb|AC152939.2| Mus musculus BAC clone RP23-312I2 from chromosome... 40 6.7
92gb|AC069146.6| Homo sapiens BAC clone RP11-39B6 from 2, complete... 40 6.7
93dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
94dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
95dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
96dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
97dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
98gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Pa... 40 6.7
99dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
100gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, com... 40 6.7
101gb|AC154526.2| Mus musculus BAC clone RP24-69I14 from 16, comple... 40 6.7
102gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, co... 40 6.7
103gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, comp... 40 6.7
104dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 6.7
105gb|AC149607.6| Mus musculus BAC clone RP23-455C13 from chromosom... 40 6.7
106ref|NM_153169.1| Mus musculus paraneoplastic antigen MA3 (Pnma3)... 40 6.7
107gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complet... 40 6.7
108gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, compl... 40 6.7
109emb|AL136329.1|MM303011 Mus musculus chromosome X, clone RP21-30... 40 6.7
110emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chro... 40 6.7
111gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 40 6.7
112dbj|AP000071.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 6.7 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 342    gtatcaacaatgtcagatcctggtaaggatagcaatatgcagcagct 388
              ||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 438279 gtatcaacaatgtcagatcctggaagggatagcaacatgcagcagct 438325



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 96       ctcctcctccctttcccctctcccc 120
                ||||||||||| |||||||||||||
Sbjct: 11016303 ctcctcctccccttcccctctcccc 11016279



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 96       ctcctcctccctttcccctctcccc 120
                ||||||||||| |||||||||||||
Sbjct: 11015806 ctcctcctccccttcccctctcccc 11015782



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      ctcctccctttcccctctcc 118
               ||||||||||||||||||||
Sbjct: 3669936 ctcctccctttcccctctcc 3669955
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>dbj|AP005634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0584D02
          Length = 147234

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 342   gtatcaacaatgtcagatcctggtaaggatagcaatatgcagcagct 388
             ||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 17050 gtatcaacaatgtcagatcctggaagggatagcaacatgcagcagct 17096
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>dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0006G10
          Length = 156293

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 342   gtatcaacaatgtcagatcctggtaaggatagcaatatgcagcagct 388
             ||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 62639 gtatcaacaatgtcagatcctggaagggatagcaacatgcagcagct 62685
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>dbj|AK105442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-A07, full
            insert sequence
          Length = 2400

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                           
Query: 342  gtatcaacaatgtcagatcctggtaaggatagcaatatgcagcagct 388
            ||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 1617 gtatcaacaatgtcagatcctggaagggatagcaacatgcagcagct 1663
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>dbj|AK072803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139J24, full
           insert sequence
          Length = 988

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 342 gtatcaacaatgtcagatcctggtaaggatagcaatatgcagcagct 388
           ||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 125 gtatcaacaatgtcagatcctggaagggatagcaacatgcagcagct 171
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>gb|BT018949.1| Zea mays clone Contig108.F mRNA sequence
          Length = 993

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 369 gatagcaatatgcagcagctagtcctaatggcaccaccggcaagggtttctggtggtga 427
           |||||||| ||||||||||||||||  || |||||||| | || || ||||||||||||
Sbjct: 185 gatagcaacatgcagcagctagtccctatagcaccaccaggaaaggcttctggtggtga 243



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 438 aaggcttctgttggtgacagtggaaagcagctggt 472
           |||||||||| |||||||||||| ||| |||||||
Sbjct: 227 aaggcttctggtggtgacagtgggaaggagctggt 261
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>gb|AY281356.1| Uncultured Acidobacteria bacterium clone 41b15 genomic sequence
          Length = 35020

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 35   cgccggcacgtcgccggcggggcg 58
            ||||||||||||||||||||||||
Sbjct: 2609 cgccggcacgtcgccggcggggcg 2586
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>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete sequence
          Length = 218059

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 95     cctcctcctccctttcccctctcc 118
              ||||||||||||||||||||||||
Sbjct: 134768 cctcctcctccctttcccctctcc 134745
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>gb|BT017968.1| Zea mays clone EL01N0523G07.c mRNA sequence
          Length = 1084

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 369 gatagcaatatgcagcagctagtcctaatggcaccaccggcaagggtttctggtggtga 427
           ||||| || ||||||||||||||||  || |||||||| | || || ||||||||||||
Sbjct: 333 gatagtaacatgcagcagctagtccctatagcaccaccaggaaaggcttctggtggtga 391
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>gb|AC121589.3| Mus musculus BAC clone RP23-281G14 from chromosome 3, complete sequence
          Length = 215395

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 98     cctcctccctttcccctctcccc 120
              |||||||||||||||||||||||
Sbjct: 103613 cctcctccctttcccctctcccc 103591
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>gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosome 12, complete sequence
          Length = 205080

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 95     cctcctcctccctttcccctctcccc 120
              ||||||||||||||||||| ||||||
Sbjct: 169882 cctcctcctccctttcccccctcccc 169857
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>gb|BC008545.1| Mus musculus WD repeat domain 23, mRNA (cDNA clone MGC:7704
            IMAGE:3497641), complete cds
          Length = 2489

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1760 tgcctcctcctccctttcccct 1781
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>ref|NM_133734.2| Mus musculus WD repeat domain 23 (Wdr23), mRNA
          Length = 2512

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1864 tgcctcctcctccctttcccct 1885
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>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete
            sequence
          Length = 160805

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 3213 tgcctcctcctccctttcccct 3234
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>gb|BC021305.1| Mus musculus WD repeat domain 23, mRNA (cDNA clone IMAGE:4195165),
            with apparent retained intron
          Length = 4462

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 3776 tgcctcctcctccctttcccct 3797
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>gb|AC098736.4| Mus musculus BAC clone RP23-122B3 from 1, complete sequence
          Length = 211208

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 97    tcctcctccctttcccctctccccaa 122
             |||||||||||||| |||||||||||
Sbjct: 89182 tcctcctccctttctcctctccccaa 89157
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>gb|BC037001.1| Mus musculus WD repeat domain 23, mRNA (cDNA clone MGC:46990
            IMAGE:5051353), complete cds
          Length = 2600

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1891 tgcctcctcctccctttcccct 1912
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>dbj|AK152395.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830067O22 product:WD repeat domain 23,
            full insert sequence
          Length = 2567

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1920 tgcctcctcctccctttcccct 1941
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>dbj|AK150183.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530142G06 product:WD repeat domain 23,
            full insert sequence
          Length = 2601

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1954 tgcctcctcctccctttcccct 1975
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>dbj|AK158784.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library,
            clone:K430309P13 product:WD repeat domain 23, full insert
            sequence
          Length = 2594

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1947 tgcctcctcctccctttcccct 1968
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>dbj|AK170657.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630112O18 product:WD
            repeat domain 23, full insert sequence
          Length = 2512

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1865 tgcctcctcctccctttcccct 1886
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>dbj|AK033540.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
            library, clone:9030614D12 product:SIMILAR TO HYPTHETICAL
            PROTEIN PRO2389, full insert sequence
          Length = 2513

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 93   tgcctcctcctccctttcccct 114
            ||||||||||||||||||||||
Sbjct: 1865 tgcctcctcctccctttcccct 1886
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>emb|BX813336.4| Mouse DNA sequence from clone RP23-207B5 on chromosome 2, complete
             sequence
          Length = 142773

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 95    cctcctcctccctttcccctctcccc 120
             ||||||||||||||||||||| ||||
Sbjct: 78433 cctcctcctccctttcccctcccccc 78408
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 95       cctcctcctccctttcccctctcccc 120
                |||||||||||| |||||||||||||
Sbjct: 20652744 cctcctcctccccttcccctctcccc 20652719



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 148      cgcagcggcgtgagctcggc 167
                ||||||||||||||||||||
Sbjct: 16116647 cgcagcggcgtgagctcggc 16116666
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>gb|AC155840.8| Mus musculus 6 BAC RP24-223C8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 188181

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 95     cctcctcctccctttcccctctcccc 120
              ||||| ||||||||||||||||||||
Sbjct: 176706 cctccccctccctttcccctctcccc 176681



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 95     cctcctcctccctttcccctctcccc 120
              ||||| ||||||||||||||||||||
Sbjct: 176674 cctccccctccctttcccctctcccc 176649



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 95     cctcctcctccctttcccctctcccc 120
              ||||| ||||||||||||||||||||
Sbjct: 176612 cctccccctccctttcccctctcccc 176587
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>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0427B07
          Length = 172058

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 95    cctcctcctccctttcccctctcccc 120
             |||||||||||| |||||||||||||
Sbjct: 75151 cctcctcctccccttcccctctcccc 75126
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>emb|BX465216.5| Mouse DNA sequence from clone RP23-282I18 on chromosome 4, complete
             sequence
          Length = 97410

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 95    cctcctcctccctttcccctctcccc 120
             ||||||||||||| ||||||||||||
Sbjct: 10442 cctcctcctccctctcccctctcccc 10467



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    cctcctcctccctttcccctctcc 118
             ||||||||||||| ||||||||||
Sbjct: 10466 cctcctcctccctctcccctctcc 10489
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>gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome 14, complete sequence
          Length = 224638

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 93    tgcctcctcctccctttcccct 114
             ||||||||||||||||||||||
Sbjct: 91748 tgcctcctcctccctttcccct 91727
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>gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complete sequence
          Length = 212677

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 95    cctcctcctccctttcccctctcccc 120
             ||||| ||||||||||||||||||||
Sbjct: 72079 cctccccctccctttcccctctcccc 72054
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>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence
          Length = 173511

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 95    cctcctcctccctttcccctctcccc 120
             ||||| ||||||||||||||||||||
Sbjct: 33738 cctccccctccctttcccctctcccc 33763
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>gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosome 8, complete sequence
          Length = 231778

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    ctccctttcccctctccccaa 122
              |||||||||||||||||||||
Sbjct: 184026 ctccctttcccctctccccaa 184006
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>ref|XM_880642.1| PREDICTED: Bos taurus similar to CDK5 regulatory subunit-associated
            protein 1 (CDK5 activator-binding protein C42),
            transcript variant 6 (LOC514086), mRNA
          Length = 2210

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 464  gcagctggtgctggtggaggg 484
            |||||||||||||||||||||
Sbjct: 1793 gcagctggtgctggtggaggg 1813
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>ref|XM_880617.1| PREDICTED: Bos taurus similar to CDK5 regulatory subunit-associated
            protein 1 (CDK5 activator-binding protein C42),
            transcript variant 5 (LOC514086), mRNA
          Length = 1946

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 464  gcagctggtgctggtggaggg 484
            |||||||||||||||||||||
Sbjct: 1529 gcagctggtgctggtggaggg 1549
to top
>ref|XM_880572.1| PREDICTED: Bos taurus similar to CDK5 regulatory subunit-associated
           protein 1 (CDK5 activator-binding protein C42),
           transcript variant 4 (LOC514086), mRNA
          Length = 1297

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 464 gcagctggtgctggtggaggg 484
           |||||||||||||||||||||
Sbjct: 880 gcagctggtgctggtggaggg 900
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>ref|XM_867616.1| PREDICTED: Bos taurus similar to CDK5 regulatory subunit-associated
            protein 1 (CDK5 activator-binding protein C42),
            transcript variant 3 (LOC514086), mRNA
          Length = 2177

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 464  gcagctggtgctggtggaggg 484
            |||||||||||||||||||||
Sbjct: 1760 gcagctggtgctggtggaggg 1780
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>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence
          Length = 253420

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    ctccctttcccctctccccaa 122
              |||||||||||||||||||||
Sbjct: 181810 ctccctttcccctctccccaa 181830
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>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    ctcctccctttcccctctccc 119
             |||||||||||||||||||||
Sbjct: 53087 ctcctccctttcccctctccc 53067
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>gb|AC124580.5| Mus musculus BAC clone RP23-114G7 from chromosome 12, complete sequence
          Length = 176245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     cctcctcctccctttcccctc 115
              |||||||||||||||||||||
Sbjct: 103088 cctcctcctccctttcccctc 103108
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>gb|AC098798.4| Homo sapiens chromosome 4 clone RP11-579K7, complete sequence
          Length = 76445

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 443   ttctgttggtgacagtggaaagcag 467
             |||||||||||||||||||| ||||
Sbjct: 59338 ttctgttggtgacagtggaaggcag 59314
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>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence
          Length = 247161

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    cctcctccctttcccctctcc 118
             |||||||||||||||||||||
Sbjct: 12819 cctcctccctttcccctctcc 12839
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>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence
          Length = 214196

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    cctcctccctttcccctctcc 118
             |||||||||||||||||||||
Sbjct: 71303 cctcctccctttcccctctcc 71323
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>gb|AC164572.4| Mus musculus 6 BAC RP24-89J17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 221464

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 48674 cctcctcctccctttcccctc 48654



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 48654 cctcctcctccctttcccctc 48634



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 48634 cctcctcctccctttcccctc 48614



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 48597 cctcctcctccctttcccctc 48577
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>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete
             sequence
          Length = 196540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 95    cctcctcctccctttcccctctccc 119
             ||||||||||||| |||||||||||
Sbjct: 92333 cctcctcctccctctcccctctccc 92357
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>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23,
              complete sequence
          Length = 261934

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    cctccctttcccctctcccca 121
              |||||||||||||||||||||
Sbjct: 222548 cctccctttcccctctcccca 222528
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>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1116_C03
          Length = 112383

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 96    ctcctcctccctttcccctctcccc 120
             ||||||||||| |||||||||||||
Sbjct: 42110 ctcctcctccccttcccctctcccc 42086



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 96    ctcctcctccctttcccctctcccc 120
             ||||||||||| |||||||||||||
Sbjct: 41613 ctcctcctccccttcccctctcccc 41589
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>emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in linkage group 23,
             complete sequence
          Length = 142417

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   cctccctttcccctctcccca 121
             |||||||||||||||||||||
Sbjct: 15802 cctccctttcccctctcccca 15782
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>emb|AL954720.14| Mouse DNA sequence from clone RP23-58C21 on chromosome X, complete
             sequence
          Length = 28204

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 95    cctcctcctccctttcccctctccc 119
             |||||||||||| ||||||||||||
Sbjct: 15925 cctcctcctccccttcccctctccc 15949
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>gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, complete sequence
          Length = 192144

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 95    cctcctcctccctttcccctctccc 119
             |||||||||||||||||| ||||||
Sbjct: 37655 cctcctcctccctttcccttctccc 37631
to top
>gb|AC155326.8| Mus musculus 6 BAC RP24-72P18 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 184159

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 80773 cctcctcctccctttcccctc 80793



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 80736 cctcctcctccctttcccctc 80756



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 80716 cctcctcctccctttcccctc 80736



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    cctcctcctccctttcccctc 115
             |||||||||||||||||||||
Sbjct: 80696 cctcctcctccctttcccctc 80716
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>gb|AC162441.11| Mus musculus chromosome 1, clone RP23-2E23, complete sequence
          Length = 225487

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 456   agtggaaagcagctggtgctg 476
             |||||||||||||||||||||
Sbjct: 59882 agtggaaagcagctggtgctg 59862
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>gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, complete sequence
          Length = 229200

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    cctcctcctccctttcccct 114
             ||||||||||||||||||||
Sbjct: 93806 cctcctcctccctttcccct 93825
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>ref|XM_477207.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  ctcctccctttcccctctcc 118
           ||||||||||||||||||||
Sbjct: 50  ctcctccctttcccctctcc 69
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>ref|NM_186191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 291

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  ctcctcctccctttcccctctccc 119
           ||||||||||| ||||||||||||
Sbjct: 166 ctcctcctccccttcccctctccc 143
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>gb|AY803087.1| Sus scrofa chromosome 17 clone pkmCon13, mRNA sequence
          Length = 547

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagctggtgctggtggaggg 484
           ||||||||||||||||||||
Sbjct: 44  cagctggtgctggtggaggg 63
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    aaacaccaccttcctcttgg 257
              ||||||||||||||||||||
Sbjct: 718273 aaacaccaccttcctcttgg 718254
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>gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, complete sequence
          Length = 211735

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   ctcctccctttcccctctcc 118
            ||||||||||||||||||||
Sbjct: 6750 ctcctccctttcccctctcc 6731
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>gb|AC146879.2| Otolemur garnettii clone CH256-29L3, complete sequence
          Length = 166428

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    aaacaccaccttcctcttgg 257
              ||||||||||||||||||||
Sbjct: 134448 aaacaccaccttcctcttgg 134429
to top
>ref|XM_417464.1| PREDICTED: Gallus gallus similar to CDK5 regulatory subunit
            associated protein 1 isoform a; CDK5 activator-binding
            protein C42-like; chromosome 20 open reading frame 34
            (LOC419292), mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  cagctggtgctggtggaggg 484
            ||||||||||||||||||||
Sbjct: 1447 cagctggtgctggtggaggg 1466
to top
>ref|XM_614891.2| PREDICTED: Bos taurus similar to Huntingtin-interacting protein 14
           (Huntingtin-interacting protein 3)
           (Huntingtin-interacting protein HYPH) (Putative
           NF-kappa-B-activating protein 205) (Putative
           MAPK-activating protein PM11) (LOC541172), mRNA
          Length = 5542

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  gcctcctcctccctttcccc 113
           ||||||||||||||||||||
Sbjct: 850 gcctcctcctccctttcccc 831
to top
>gb|AC154670.2| Mus musculus BAC clone RP24-293L9 from chromosome 14, complete sequence
          Length = 163908

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    tcctcctccctttcccctctcccc 120
             ||||||||||| ||||||||||||
Sbjct: 19266 tcctcctccctctcccctctcccc 19289
to top
>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence
          Length = 175471

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ctcctccctttcccctctcc 118
              ||||||||||||||||||||
Sbjct: 135668 ctcctccctttcccctctcc 135687
to top
>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     cctcctcctccctttcccctctcc 118
              ||||||| ||||||||||||||||
Sbjct: 137310 cctcctcttccctttcccctctcc 137333
to top
>gb|AC118281.4| Homo sapiens BAC clone RP11-1244E8 from 4, complete sequence
          Length = 51095

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 99    ctcctccctttcccctctccccaatcca 126
             ||||||||||| |||||||| |||||||
Sbjct: 40420 ctcctccctttaccctctccgcaatcca 40447
to top
>gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome 17, complete sequence
          Length = 215469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    tcctcctccctttcccctct 116
             ||||||||||||||||||||
Sbjct: 91283 tcctcctccctttcccctct 91264
to top
>gb|AC018360.16| Homo sapiens 3 BAC RP11-67D16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179993

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     ctcctcctccctttcccctc 115
              ||||||||||||||||||||
Sbjct: 166480 ctcctcctccctttcccctc 166461
to top
>gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, complete sequence
          Length = 209230

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     tcctcctccctttcccctctcccc 120
              ||||||||||| ||||||||||||
Sbjct: 162311 tcctcctccctctcccctctcccc 162334
to top
>gb|AC121865.2| Mus musculus BAC clone RP24-112O1 from 8, complete sequence
          Length = 178620

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tcctccctttcccctctccc 119
             ||||||||||||||||||||
Sbjct: 58175 tcctccctttcccctctccc 58156
to top
>gb|AC116578.3| Mus musculus BAC clone RP23-264P8 from 9, complete sequence
          Length = 151722

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  tcctccctttcccctctccc 119
            ||||||||||||||||||||
Sbjct: 7811 tcctccctttcccctctccc 7792
to top
>gb|AC114987.10| Mus musculus chromosome 3, clone RP23-81D7, complete sequence
          Length = 179717

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   cctccctttcccctctcccc 120
             ||||||||||||||||||||
Sbjct: 66868 cctccctttcccctctcccc 66887
to top
>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence
          Length = 190653

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ctcctcctccctttcccctc 115
             ||||||||||||||||||||
Sbjct: 96353 ctcctcctccctttcccctc 96372
to top
>gb|AC158913.4| Mus musculus chromosome 5, clone RP24-268J3, complete sequence
          Length = 152822

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ctcctccctttcccctctcc 118
             ||||||||||||||||||||
Sbjct: 18560 ctcctccctttcccctctcc 18579
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     cagcggcgtgagctcggcgg 169
               ||||||||||||||||||||
Sbjct: 3080799 cagcggcgtgagctcggcgg 3080780
to top
>emb|AL354749.6| Human DNA sequence from clone RP11-156D10 on chromosome 10 Contains part
              of the NRG3 gene for neuregulin 3, complete sequence
          Length = 196000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     ctcctcctccctttcccctctccc 119
              |||||||| |||||||||||||||
Sbjct: 112320 ctcctcctacctttcccctctccc 112297
to top
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   aagcagctggtgctggtgga 481
             ||||||||||||||||||||
Sbjct: 60816 aagcagctggtgctggtgga 60835
to top
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    aagcagctggtgctggtgga 481
              ||||||||||||||||||||
Sbjct: 325738 aagcagctggtgctggtgga 325757
to top
>emb|AL021127.2|MMCMX137 Mus musculus chromosome X contigA; putative Magea9 gene, Caltractin,
              NAD(P) steroid dehydrogenase and Zinc finger protein 185
          Length = 195025

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     tcctcctccctttcccctctcccc 120
              ||||| ||||||||||||||||||
Sbjct: 174747 tcctcttccctttcccctctcccc 174724
to top
>dbj|AK141560.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630028E12 product:paraneoplastic antigen
            MA3, full insert sequence
          Length = 2870

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   tcctcctccctttcccctctcccc 120
            ||||| ||||||||||||||||||
Sbjct: 1956 tcctcttccctttcccctctcccc 1979
to top
>gb|AC099685.2| Homo sapiens chromosome 8, clone RP11-87N16, complete sequence
          Length = 182413

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   cttggcaatatttttctgct 272
             ||||||||||||||||||||
Sbjct: 47773 cttggcaatatttttctgct 47792
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>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence
          Length = 214702

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 467   gctggtgctggtggagggtggagg 490
             ||||||| ||||||||||||||||
Sbjct: 99827 gctggtgatggtggagggtggagg 99804
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>dbj|AK157082.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830120D15 product:unclassifiable, full
           insert sequence
          Length = 1252

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 100 tcctccctttcccctctccc 119
           ||||||||||||||||||||
Sbjct: 38  tcctccctttcccctctccc 19
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>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence
          Length = 168843

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   cctttcccctctccccaatc 124
             ||||||||||||||||||||
Sbjct: 52467 cctttcccctctccccaatc 52486
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>gb|BC036726.1| Mus musculus paraneoplastic antigen MA3, mRNA (cDNA clone MGC:40840
            IMAGE:5368858), complete cds
          Length = 3481

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   tcctcctccctttcccctctcccc 120
            ||||| ||||||||||||||||||
Sbjct: 2526 tcctcttccctttcccctctcccc 2549
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>gb|S47405.1| glycine-rich protein {clone atGRP-1} [Arabidopsis thaliana, C24,
           mRNA Partial, 740 nt]
          Length = 740

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 466 agctggtgctggtggagggt 485
           ||||||||||||||||||||
Sbjct: 4   agctggtgctggtggagggt 23
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>gb|AC151769.3| Mus musculus BAC clone RP24-375O19 from chromosome 9, complete sequence
          Length = 186410

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    tcctccctttcccctctccc 119
              ||||||||||||||||||||
Sbjct: 116025 tcctccctttcccctctccc 116006
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>gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, complete sequence
          Length = 210516

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    cctccctttcccctctcccc 120
              ||||||||||||||||||||
Sbjct: 104354 cctccctttcccctctcccc 104335
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>emb|BX813330.7| Mouse DNA sequence from clone RP23-11C16 on chromosome X, complete
             sequence
          Length = 148732

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    tcctcctccctttcccctctcccc 120
             ||||| ||||||||||||||||||
Sbjct: 42991 tcctcttccctttcccctctcccc 43014



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    tcctcctccctttcccctctcccc 120
             ||||| ||||||||||||||||||
Sbjct: 10408 tcctcttccctttcccctctcccc 10385
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>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence
          Length = 211012

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     cctcctcctccctttcccctctcc 118
              |||| |||||||||||||||||||
Sbjct: 128614 cctcttcctccctttcccctctcc 128637
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      ctcctccctttcccctctcc 118
               ||||||||||||||||||||
Sbjct: 7672080 ctcctccctttcccctctcc 7672099



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     ctcctcctccctttcccctctccc 119
              ||||||||||| ||||||||||||
Sbjct: 650328 ctcctcctccccttcccctctccc 650305
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>gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I13 map 3p, complete sequence
          Length = 196044

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     cctcctcctccctttcccctctcc 118
              |||| |||||||||||||||||||
Sbjct: 181619 cctcttcctccctttcccctctcc 181642
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>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence
          Length = 167631

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   cctccctttcccctctcccc 120
             ||||||||||||||||||||
Sbjct: 79804 cctccctttcccctctcccc 79785
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>gb|AC152939.2| Mus musculus BAC clone RP23-312I2 from chromosome 7, complete sequence
          Length = 205980

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tcctccctttcccctctccc 119
              ||||||||||||||||||||
Sbjct: 186946 tcctccctttcccctctccc 186965
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>gb|AC069146.6| Homo sapiens BAC clone RP11-39B6 from 2, complete sequence
          Length = 122770

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   ggtggagggtggaggaaaga 495
             ||||||||||||||||||||
Sbjct: 90844 ggtggagggtggaggaaaga 90863
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>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1123_C12
          Length = 114309

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    ctcctcctccctttcccctctccc 119
             ||||||||||| ||||||||||||
Sbjct: 84830 ctcctcctccccttcccctctccc 84807
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>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0618D11
          Length = 150103

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    cgcagcggcgtgagctcggc 167
              ||||||||||||||||||||
Sbjct: 145376 cgcagcggcgtgagctcggc 145395
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>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0040M10
          Length = 162790

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   cgcagcggcgtgagctcggc 167
             ||||||||||||||||||||
Sbjct: 21440 cgcagcggcgtgagctcggc 21459
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>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0565A07
          Length = 152191

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ctcctccctttcccctctcc 118
             ||||||||||||||||||||
Sbjct: 16169 ctcctccctttcccctctcc 16188
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>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0499G10
          Length = 158375

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ctcctccctttcccctctcc 118
              ||||||||||||||||||||
Sbjct: 155711 ctcctccctttcccctctcc 155730
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>gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 209876

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    cctcctcctccctttcccctctcc 118
             |||| |||||||||||||||||||
Sbjct: 28272 cctcttcctccctttcccctctcc 28249
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>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1695_A02
          Length = 156214

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ctcctccctttcccctctcc 118
             ||||||||||||||||||||
Sbjct: 78197 ctcctccctttcccctctcc 78216
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>gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, complete sequence
          Length = 153206

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ctcctccctttcccctctcc 118
             ||||||||||||||||||||
Sbjct: 28978 ctcctccctttcccctctcc 28997
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>gb|AC154526.2| Mus musculus BAC clone RP24-69I14 from 16, complete sequence
          Length = 219420

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    cctccctttcccctctcccc 120
              ||||||||||||||||||||
Sbjct: 125298 cctccctttcccctctcccc 125279
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>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence
          Length = 218103

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     cctcctcctccctttcccctctcc 118
              |||||||||||||||||| |||||
Sbjct: 169266 cctcctcctccctttcccttctcc 169243
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>gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, complete sequence
          Length = 194387

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tcctccctttcccctctccc 119
             ||||||||||||||||||||
Sbjct: 22264 tcctccctttcccctctccc 22283
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>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence
          Length = 185588

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    cctttcccctctccccaatc 124
              ||||||||||||||||||||
Sbjct: 157823 cctttcccctctccccaatc 157842
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>gb|AC149607.6| Mus musculus BAC clone RP23-455C13 from chromosome 7, complete sequence
          Length = 206284

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    tcctccctttcccctctccc 119
              ||||||||||||||||||||
Sbjct: 121850 tcctccctttcccctctccc 121831
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>ref|NM_153169.1| Mus musculus paraneoplastic antigen MA3 (Pnma3), mRNA
          Length = 3481

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   tcctcctccctttcccctctcccc 120
            ||||| ||||||||||||||||||
Sbjct: 2526 tcctcttccctttcccctctcccc 2549
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>gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complete sequence
          Length = 217329

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 cctccctttcccctctcccc 120
           ||||||||||||||||||||
Sbjct: 112 cctccctttcccctctcccc 93
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>gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, complete sequence
          Length = 229555

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 308    aattctgtctctctggcaaatcct 331
              ||||||||||||||||||| ||||
Sbjct: 144683 aattctgtctctctggcaactcct 144660
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>emb|AL136329.1|MM303011 Mus musculus chromosome X, clone RP21-303O11
          Length = 123835

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    tcctcctccctttcccctctcccc 120
             ||||| ||||||||||||||||||
Sbjct: 64883 tcctcttccctttcccctctcccc 64906



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    tcctcctccctttcccctctcccc 120
             ||||| ||||||||||||||||||
Sbjct: 31021 tcctcttccctttcccctctcccc 30998
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>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete
            sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   tcctcctccctttcccctctcccc 120
            |||| |||||||||||||||||||
Sbjct: 9247 tcctgctccctttcccctctcccc 9270
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>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    cctcctcctccctttcccctctcc 118
             |||| |||||||||||||||||||
Sbjct: 64232 cctcttcctccctttcccctctcc 64255
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>dbj|AP000071.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 7/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   cctttcccctctccccaatc 124
             ||||||||||||||||||||
Sbjct: 77189 cctttcccctctccccaatc 77170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,262,347
Number of Sequences: 3902068
Number of extensions: 5262347
Number of successful extensions: 107960
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107304
Number of HSP's gapped (non-prelim): 656
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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