ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22b06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB206815.1| Hordeum vulgare IDI4 mRNA for putative asparate aminotransferase, complete cds Length = 1401 Score = 1239 bits (625), Expect = 0.0 Identities = 634/637 (99%) Strand = Plus / Plus Query: 1 aaagaatcagtatgcaagaggatatggtgtgcctgaattgaattcagctgttgctgagag 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 268 aaagaatcagtatgcaagaggatatggtgtgcctgaattgaactcagctgttgctgagag 327 Query: 61 atttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 atttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctgg 387 Query: 121 gtgcacagaagcaatagctgcaacaatattgggtctgatcaaccctggggatgaagtcat 180 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 388 gtgcacagaagcaatagctgcaacgatattgggtctgatcaaccctggggatgaagtcat 447 Query: 181 actgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 actgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgt 507 Query: 241 caaagccattacacttcgccctccggactttgcagtccctcttgaagagctaaaggctgc 300 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 caaagccattacactccgccctccggactttgcagtccctcttgaagagctaaaggctgc 567 Query: 301 agtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 agtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaat 627 Query: 361 gttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaatgacgtgttgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 gttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaatgacgtgttgct 687 Query: 421 ctttgccgatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 ctttgccgatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttc 747 Query: 481 tattcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctcctt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 tattcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctcctt 807 Query: 541 gaccggatggaagatcggctgggcgatagcaccaccgcacctgacatggggcgtaaggca 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 gaccggatggaagatcggctgggcgatagcaccaccgcacctgacatggggcgtaaggca 867 Query: 601 ggcacactccttcctcacattcgccacctccacgccg 637 ||||||||||||||||||||||||||||||||||||| Sbjct: 868 ggcacactccttcctcacattcgccacctccacgccg 904
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 613 bits (309), Expect = e-172 Identities = 540/617 (87%) Strand = Plus / Plus Query: 2 aagaatcagtatgcaagaggatatggtgtgcctgaattgaattcagctgttgctgagaga 61 ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||| ||| Sbjct: 16972596 aagaatcagtacgcaagaggatatggtgtgcctgaactgaactcagctattgctgaaaga 16972655 Query: 62 tttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctggg 121 || || |||||||| ||| |||| ||||||| || |||||||||||||| |||||||| Sbjct: 16972656 ttcctgaaggacagcggactgcaagtcgatccggagaaggaagttactgtcacatctgga 16972715 Query: 122 tgcacagaagcaatagctgcaacaatattgggtctgatcaaccctggggatgaagtcata 181 ||||||||||| |||||||||||||| || ||||| || || || || |||||||| ||| Sbjct: 16972716 tgcacagaagctatagctgcaacaattttaggtctaattaatccaggcgatgaagtgata 16972775 Query: 182 ctgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgtc 241 |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || || Sbjct: 16972776 ttgtttgctccattctatgattcatatgaggctaccctgtcaatggctggtgccaacgta 16972835 Query: 242 aaagccattacacttcgccctccggactttgcagtccctcttgaagagctaaaggctgca 301 ||||||||||| || || ||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 16972836 aaagccattactctccgtcctccagatttttcagtccctcttgaagagctaaaggctgca 16972895 Query: 302 gtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaatg 361 ||||||||||| |||||||| || ||||| || || || ||||| ||||| ||||||||| Sbjct: 16972896 gtctcgaagaacaccagagctattatgataaacaccccgcacaatcctactgggaaaatg 16972955 Query: 362 ttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaatgacgtgttgctc 421 || |||||||| ||||||||||| ||||| |||||||||||||||||| ||| |||| Sbjct: 16972956 tttacaagggaagaacttgagtttattgccactctctgcaaggaaaatgatgtgctgctt 16973015 Query: 422 tttgccgatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttct 481 ||||| |||||||||||||||||| | || |||||||| ||||| ||||||||||||||| Sbjct: 16973016 tttgctgatgaggtctacgacaagttagcttttgaggcagatcatatatcaatggcttct 16973075 Query: 482 attcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctccttg 541 |||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | Sbjct: 16973076 attcctggcatgtatgagaggaccgtgaccatgaactctcttgggaagacattctctctt 16973135 Query: 542 accggatggaagatcggctgggcgatagcaccaccgcacctgacatggggcgtaaggcag 601 || |||||||||||||| ||||| || ||||| || |||||||||||||| ||||||||| Sbjct: 16973136 acaggatggaagatcggttgggcaatcgcaccgccacacctgacatggggtgtaaggcag 16973195 Query: 602 gcacactccttcctcac 618 |||||||| |||||||| Sbjct: 16973196 gcacactcattcctcac 16973212
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 613 bits (309), Expect = e-172 Identities = 540/617 (87%) Strand = Plus / Plus Query: 2 aagaatcagtatgcaagaggatatggtgtgcctgaattgaattcagctgttgctgagaga 61 ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||| ||| Sbjct: 102409 aagaatcagtacgcaagaggatatggtgtgcctgaactgaactcagctattgctgaaaga 102468 Query: 62 tttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctggg 121 || || |||||||| ||| |||| ||||||| || |||||||||||||| |||||||| Sbjct: 102469 ttcctgaaggacagcggactgcaagtcgatccggagaaggaagttactgtcacatctgga 102528 Query: 122 tgcacagaagcaatagctgcaacaatattgggtctgatcaaccctggggatgaagtcata 181 ||||||||||| |||||||||||||| || ||||| || || || || |||||||| ||| Sbjct: 102529 tgcacagaagctatagctgcaacaattttaggtctaattaatccaggcgatgaagtgata 102588 Query: 182 ctgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgtc 241 |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || || Sbjct: 102589 ttgtttgctccattctatgattcatatgaggctaccctgtcaatggctggtgccaacgta 102648 Query: 242 aaagccattacacttcgccctccggactttgcagtccctcttgaagagctaaaggctgca 301 ||||||||||| || || ||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 102649 aaagccattactctccgtcctccagatttttcagtccctcttgaagagctaaaggctgca 102708 Query: 302 gtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaatg 361 ||||||||||| |||||||| || ||||| || || || ||||| ||||| ||||||||| Sbjct: 102709 gtctcgaagaacaccagagctattatgataaacaccccgcacaatcctactgggaaaatg 102768 Query: 362 ttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaatgacgtgttgctc 421 || |||||||| ||||||||||| ||||| |||||||||||||||||| ||| |||| Sbjct: 102769 tttacaagggaagaacttgagtttattgccactctctgcaaggaaaatgatgtgctgctt 102828 Query: 422 tttgccgatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttct 481 ||||| |||||||||||||||||| | || |||||||| ||||| ||||||||||||||| Sbjct: 102829 tttgctgatgaggtctacgacaagttagcttttgaggcagatcatatatcaatggcttct 102888 Query: 482 attcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctccttg 541 |||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | Sbjct: 102889 attcctggcatgtatgagaggaccgtgaccatgaactctcttgggaagacattctctctt 102948 Query: 542 accggatggaagatcggctgggcgatagcaccaccgcacctgacatggggcgtaaggcag 601 || |||||||||||||| ||||| || ||||| || |||||||||||||| ||||||||| Sbjct: 102949 acaggatggaagatcggttgggcaatcgcaccgccacacctgacatggggtgtaaggcag 103008 Query: 602 gcacactccttcctcac 618 |||||||| |||||||| Sbjct: 103009 gcacactcattcctcac 103025
>dbj|AK120288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050C15, full insert sequence Length = 1790 Score = 613 bits (309), Expect = e-172 Identities = 540/617 (87%) Strand = Plus / Plus Query: 2 aagaatcagtatgcaagaggatatggtgtgcctgaattgaattcagctgttgctgagaga 61 ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||| ||| Sbjct: 491 aagaatcagtacgcaagaggatatggtgtgcctgaactgaactcagctattgctgaaaga 550 Query: 62 tttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctggg 121 || || |||||||| ||| |||| ||||||| || |||||||||||||| |||||||| Sbjct: 551 ttcctgaaggacagcggactgcaagtcgatccggagaaggaagttactgtcacatctgga 610 Query: 122 tgcacagaagcaatagctgcaacaatattgggtctgatcaaccctggggatgaagtcata 181 ||||||||||| |||||||||||||| || ||||| || || || || |||||||| ||| Sbjct: 611 tgcacagaagctatagctgcaacaattttaggtctaattaatccaggcgatgaagtgata 670 Query: 182 ctgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgtc 241 |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || || Sbjct: 671 ttgtttgctccattctatgattcatatgaggctaccctgtcaatggctggtgccaacgta 730 Query: 242 aaagccattacacttcgccctccggactttgcagtccctcttgaagagctaaaggctgca 301 ||||||||||| || || ||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 731 aaagccattactctccgtcctccagatttttcagtccctcttgaagagctaaaggctgca 790 Query: 302 gtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaatg 361 ||||||||||| |||||||| || ||||| || || || ||||| ||||| ||||||||| Sbjct: 791 gtctcgaagaacaccagagctattatgataaacaccccgcacaatcctactgggaaaatg 850 Query: 362 ttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaatgacgtgttgctc 421 || |||||||| ||||||||||| ||||| |||||||||||||||||| ||| |||| Sbjct: 851 tttacaagggaagaacttgagtttattgccactctctgcaaggaaaatgatgtgctgctt 910 Query: 422 tttgccgatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttct 481 ||||| |||||||||||||||||| | || |||||||| ||||| ||||||||||||||| Sbjct: 911 tttgctgatgaggtctacgacaagttagcttttgaggcagatcatatatcaatggcttct 970 Query: 482 attcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctccttg 541 |||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | Sbjct: 971 attcctggcatgtatgagaggaccgtgaccatgaactctcttgggaagacattctctctt 1030 Query: 542 accggatggaagatcggctgggcgatagcaccaccgcacctgacatggggcgtaaggcag 601 || |||||||||||||| ||||| || ||||| || |||||||||||||| ||||||||| Sbjct: 1031 acaggatggaagatcggttgggcaatcgcaccgccacacctgacatggggtgtaaggcag 1090 Query: 602 gcacactccttcctcac 618 |||||||| |||||||| Sbjct: 1091 gcacactcattcctcac 1107
>dbj|AK119212.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E06, full insert sequence Length = 1543 Score = 613 bits (309), Expect = e-172 Identities = 540/617 (87%) Strand = Plus / Plus Query: 2 aagaatcagtatgcaagaggatatggtgtgcctgaattgaattcagctgttgctgagaga 61 ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||| ||| Sbjct: 374 aagaatcagtacgcaagaggatatggtgtgcctgaactgaactcagctattgctgaaaga 433 Query: 62 tttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctggg 121 || || |||||||| ||| |||| ||||||| || |||||||||||||| |||||||| Sbjct: 434 ttcctgaaggacagcggactgcaagtcgatccggagaaggaagttactgtcacatctgga 493 Query: 122 tgcacagaagcaatagctgcaacaatattgggtctgatcaaccctggggatgaagtcata 181 ||||||||||| |||||||||||||| || ||||| || || || || |||||||| ||| Sbjct: 494 tgcacagaagctatagctgcaacaattttaggtctaattaatccaggcgatgaagtgata 553 Query: 182 ctgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgtc 241 |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || || Sbjct: 554 ttgtttgctccattctatgattcatatgaggctaccctgtcaatggctggtgccaacgta 613 Query: 242 aaagccattacacttcgccctccggactttgcagtccctcttgaagagctaaaggctgca 301 ||||||||||| || || ||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 614 aaagccattactctccgtcctccagatttttcagtccctcttgaagagctaaaggctgca 673 Query: 302 gtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaatg 361 ||||||||||| |||||||| || ||||| || || || ||||| ||||| ||||||||| Sbjct: 674 gtctcgaagaacaccagagctattatgataaacaccccgcacaatcctactgggaaaatg 733 Query: 362 ttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaatgacgtgttgctc 421 || |||||||| ||||||||||| ||||| |||||||||||||||||| ||| |||| Sbjct: 734 tttacaagggaagaacttgagtttattgccactctctgcaaggaaaatgatgtgctgctt 793 Query: 422 tttgccgatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttct 481 ||||| |||||||||||||||||| | || |||||||| ||||| ||||||||||||||| Sbjct: 794 tttgctgatgaggtctacgacaagttagcttttgaggcagatcatatatcaatggcttct 853 Query: 482 attcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctccttg 541 |||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | Sbjct: 854 attcctggcatgtatgagaggaccgtgaccatgaactctcttgggaagacattctctctt 913 Query: 542 accggatggaagatcggctgggcgatagcaccaccgcacctgacatggggcgtaaggcag 601 || |||||||||||||| ||||| || ||||| || |||||||||||||| ||||||||| Sbjct: 914 acaggatggaagatcggttgggcaatcgcaccgccacacctgacatggggtgtaaggcag 973 Query: 602 gcacactccttcctcac 618 |||||||| |||||||| Sbjct: 974 gcacactcattcctcac 990
>gb|AY108976.1| Zea mays PCO084707 mRNA sequence Length = 812 Score = 252 bits (127), Expect = 1e-63 Identities = 337/407 (82%) Strand = Plus / Plus Query: 2 aagaatcagtatgcaagaggatatggtgtgcctgaattgaattcagctgttgctgagaga 61 ||||||||||| |||||||| | ||||||||||||| |||| || ||| | ||||| || Sbjct: 405 aagaatcagtacgcaagagggtttggtgtgcctgaactgaactcggctatcgctgaaagg 464 Query: 62 tttctcaaggacagtggattgcacatcgatcctgataaggaagttactgttacatctggg 121 || || ||||||||||||||||| | || ||||| |||||||| |||||||||||||| Sbjct: 465 ttcctgaaggacagtggattgcaagttgaccctgacaaggaagtcactgttacatctgga 524 Query: 122 tgcacagaagcaatagctgcaacaatattgggtctgatcaaccctggggatgaagtcata 181 ||||| || |||||||||||||| ||| | ||||||||||| ||||| || || || ||| Sbjct: 525 tgcactgaggcaatagctgcaaccatactaggtctgatcaatcctggcgacgaggtgata 584 Query: 182 ctgtttgctccattctatgattcttatgaggctacactgtccatggctggtgcgaatgtc 241 ||||| || |||||||| ||||| || |||||||||||||| ||||| ||||| || || Sbjct: 585 ctgttcgccccattctacgattcatacgaggctacactgtcgatggccggtgccaacgtg 644 Query: 242 aaagccattacacttcgccctccggactttgcagtccctcttgaagagctaaaggctgca 301 || |||||||| || ||| |||| || || || ||||| ||||||||||| |||||||| Sbjct: 645 aaggccattaccctccgcgctccagatttcgcggtcccgcttgaagagctggaggctgca 704 Query: 302 gtctcgaagaataccagagcaataatgattaatacacctcacaaccctaccgggaaaatg 361 ||||| ||| | || | ||| |||||||| || || || |||||||| |||||||||||| Sbjct: 705 gtctccaaggacacgaaagcgataatgataaacacgccgcacaacccaaccgggaaaatg 764 Query: 362 ttcacaagggaggaacttgagttcattgctgatctctgcaaggaaaa 408 ||||| |||||||| || || | ||| || | |||||||||||||| Sbjct: 765 ttcaccagggaggagctcgaatccatcgccgccctctgcaaggaaaa 811
>ref|NM_106416.1| Arabidopsis thaliana 1-aminocyclopropane-1-carboxylate synthase/ transaminase/ transferase, transferring nitrogenous groups AT1G77670 mRNA, complete cds Length = 1539 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 486 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 545 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 546 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 605 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 606 gaagcaacactctctatggctggtgc 631 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Plus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 738 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 797 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 798 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 857 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 858 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 917 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgatagcaccaccgcac 580 ||||| ||||| ||||| || |||||||||||||||||||||||||| || || || || Sbjct: 918 ctgggaaagactttctctttaaccggatggaagatcggctgggcgattgcgccgcctcat 977 Query: 581 ctgacatggggcgtaaggcaggcacactccttcctcacattcgccac 627 ||||| ||||| || | || |||||||| | ||||||||||||||| Sbjct: 978 ctgacttggggagttcgacaagcacactcttacctcacattcgccac 1024
>gb|AY074320.1| Arabidopsis thaliana putative aminotransferase (At1g77670) mRNA, complete cds Length = 1477 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 431 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 490 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 491 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 550 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 551 gaagcaacactctctatggctggtgc 576 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Plus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 683 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 742 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 743 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 802 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 803 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 862 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgatagcaccaccgcac 580 ||||| ||||| ||||| || |||||||||||||||||||||||||| || || || || Sbjct: 863 ctgggaaagactttctctttaaccggatggaagatcggctgggcgattgcgccgcctcat 922 Query: 581 ctgacatggggcgtaaggcaggcacactccttcctcacattcgccac 627 ||||| ||||| || | || |||||||| | ||||||||||||||| Sbjct: 923 ctgacttggggagttcgacaagcacactcttacctcacattcgccac 969
>emb|BX817811.1|CNS0ADVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZA04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 381 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 440 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 441 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 500 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 501 gaagcaacactctctatggctggtgc 526 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Plus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 633 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 692 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 693 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 752 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 753 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 812 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgat 567 ||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 813 ctgggaaagactttctctttaaccggatggaagatcggctgggcgat 859
>emb|BX815823.1|CNS0ADB2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1449 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 440 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 499 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 500 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 559 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 560 gaagcaacactctctatggctggtgc 585 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Plus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 692 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 751 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 752 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 811 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 812 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 871 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgatagcaccaccgcac 580 ||||| ||||| ||||| || |||||||||||||||||||||||||| || || || || Sbjct: 872 ctgggaaagactttctctttaaccggatggaagatcggctgggcgattgcgccgcctcat 931 Query: 581 ctgacatggggcgtaaggcaggcacactccttcctcacattcgccac 627 ||||| ||||| || | || |||||||| | ||||||||||||||| Sbjct: 932 ctgacttggggagttcgacaagcacactcttacctcacattcgccac 978
>emb|BX816482.1|CNS0AD3G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1441 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 448 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 507 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 508 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 567 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 568 gaagcaacactctctatggctggtgc 593 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Plus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 700 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 759 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 760 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 819 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 820 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 879 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgatagcaccaccgcac 580 ||||| ||||| ||||| || |||||||||||||||||||||||||| || || || || Sbjct: 880 ctgggaaagactttctctttaaccggatggaagatcggctgggcgattgcgccgcctcat 939 Query: 581 ctgacatggggcgtaaggcaggcacactccttcctcacattcgccac 627 ||||| ||||| || | || |||||||| | ||||||||||||||| Sbjct: 940 ctgacttggggagttcgacaagcacactcttacctcacattcgccac 986
>gb|AC010704.6|AC010704 Arabidopsis thaliana chromosome 1 BAC T5M16 genomic sequence, complete sequence Length = 103353 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Minus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 100475 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 100416 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 100415 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 100356 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 100355 gaagcaacactctctatggctggtgc 100330 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Minus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 100223 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 100164 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 100163 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 100104 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 100103 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 100044 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgatagcaccaccgcac 580 ||||| ||||| ||||| || |||||||||||||||||||||||||| || || || || Sbjct: 100043 ctgggaaagactttctctttaaccggatggaagatcggctgggcgattgcgccgcctcat 99984 Query: 581 ctgacatggggcgtaaggcaggcacactccttcctcacattcgccac 627 ||||| ||||| || | || |||||||| | ||||||||||||||| Sbjct: 99983 ctgacttggggagttcgacaagcacactcttacctcacattcgccac 99937
>gb|AY087416.1| Arabidopsis thaliana clone 35179 mRNA, complete sequence Length = 1539 Score = 123 bits (62), Expect = 8e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 |||||||| || |||||||||||||||||||| ||||||||||| ||||||||| | || Sbjct: 486 gatcctgagaaagaagttactgttacatctggttgcacagaagccatagctgcagctatg 545 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 |||||| | || |||||||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 546 ttgggtttaataaaccctggtgatgaagtcattctctttgcaccgttttatgattcctat 605 Query: 209 gaggctacactgtccatggctggtgc 234 || || ||||| || ||||||||||| Sbjct: 606 gaagcaacactctctatggctggtgc 631 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Plus Query: 341 cacaaccctaccgggaaaatgttcacaagggaggaacttgagttcattgctgatctctgc 400 |||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 738 cacaacccgaccgggaagatgttcactagggaggagcttgaaaccattgcatctctctgc 797 Query: 401 aaggaaaatgacgtgttgctctttgccgatgaggtctacgacaagctggcgtttgaggcg 460 | ||||| || ||| | | || | ||||| || ||||| ||||| |||||||| | Sbjct: 798 attgaaaacgatgtgcttgtgttctcggatgaagtatacgataagcttgcgtttgaaatg 857 Query: 461 gatcacatatcaatggcttctattcctggcatgtatgagaggaccgtcactatgaactcc 520 |||||||| || || |||||| |||| || |||||||| || || || || ||||| ||| Sbjct: 858 gatcacatttctatagcttctcttcccggtatgtatgaaagaactgtgaccatgaattcc 917 Query: 521 ctggggaagacgttctccttgaccggatggaagatcggctgggcgatagcaccaccgcac 580 ||||| ||||| ||||| || |||||||||||||||||||||||||| || || || || Sbjct: 918 ctgggaaagactttctctttaaccggatggaagatcggctgggcgattgcgccgcctcat 977 Query: 581 ctgacatggggcgtaaggcaggcacactccttcctcacattcgccac 627 ||||| ||||| || | || |||||||| | ||||||||||||||| Sbjct: 978 ctgacttggggagttcgacaagcacactcttacctcacattcgccac 1024
>emb|CR538723.1| M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3, complete sequence Length = 106695 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 ||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||| || Sbjct: 97430 gatcctgataacgaaattactgttacatctggttgcacagaagcaatcgctgcaactgta 97371 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 || || | || || || || || || || || ||||||||||| || |||||||||||| Sbjct: 97370 ttaggattaataaatcccggtgaagaggttattctgtttgctcctttttatgattcttat 97311 Query: 209 gaggctacactgtccatggctggtgcgaatgtcaaagccattacacttcgccctcc 264 | || || | |||||||||||||| ||| | ||| |||||| || |||||||| Sbjct: 97310 ggtgccactttatccatggctggtgcaaatataaaaagcattactctgcgccctcc 97255 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 476 gcttctattcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttc 535 |||||| | ||||| |||| |||| |||| || || |||||||| |||||||||| ||| Sbjct: 93407 gcttctttgcctggaatgtttgagcggacggtgacaatgaactcgttggggaagacattc 93348 Query: 536 tccttgaccggatggaagatcggctgggcgatagcaccaccgcacctgacatgggg 591 |||||||| |||||||| ||||||||||| |||||||| || ||| | |||||||| Sbjct: 93347 tccttgactggatggaaaatcggctgggccatagcacctccacacttaacatgggg 93292 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 92 cctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaatattg 151 ||||| |||||| |||||||||| ||||||||||| |||||||| |||||||| | || Sbjct: 93791 cctgaaaaggaaattactgttacgtctgggtgcacggaagcaattgctgcaactgtgtta 93732 Query: 152 ggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttatgag 211 || |||| || || || ||||| || || ||||||| || || |||||||||||||| Sbjct: 93731 ggattgataaatcccggtgatgaggttatcgtgtttgcccctttttatgattcttatgaa 93672 Query: 212 gctacactgtccatggctggtgcgaatgtcaaagccattacacttcgccctccggacttt 271 || || | |||||||||||||| || || |||| ||| || || |||||||| || ||| Sbjct: 93671 gccactttatccatggctggtgcaaaagtaaaaggcatcactctgcgccctccagatttt 93612 Query: 272 gc 273 || Sbjct: 93611 gc 93610 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 92 cctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaatattg 151 |||||||| ||| ||||||||||| |||| |||||||||||||| |||||||| ||| Sbjct: 102689 cctgataaagaaattactgttacaactggttgcacagaagcaatcgctgcaactgcatta 102630 Query: 152 ggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttatgag 211 || | || || || || ||||| || || |||||||||| || ||||||||||||| Sbjct: 102629 ggatttataaatcccggtgatgaggttattttgtttgctcctttttatgattcttatggt 102570 Query: 212 gctacactgtccatggctggtgcga 236 || || | |||||||||||||||| Sbjct: 102569 gccactttatccatggctggtgcga 102545
>emb|CR538722.1| M.truncatula DNA sequence from clone MTH2-11A20 on chromosome 3, complete sequence Length = 118829 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 89 gatcctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaata 148 ||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||| || Sbjct: 17374 gatcctgataacgaaattactgttacatctggttgcacagaagcaatcgctgcaactgta 17315 Query: 149 ttgggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 || || | || || || || || || || || ||||||||||| || |||||||||||| Sbjct: 17314 ttaggattaataaatcccggtgaagaggttattctgtttgctcctttttatgattcttat 17255 Query: 209 gaggctacactgtccatggctggtgcgaatgtcaaagccattacacttcgccctcc 264 | || || | |||||||||||||| ||| | ||| |||||| || |||||||| Sbjct: 17254 ggtgccactttatccatggctggtgcaaatataaaaagcattactctgcgccctcc 17199 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 476 gcttctattcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttc 535 |||||| | ||||| |||| |||| |||| || || |||||||| |||||||||| ||| Sbjct: 13351 gcttctttgcctggaatgtttgagcggacggtgacaatgaactcgttggggaagacattc 13292 Query: 536 tccttgaccggatggaagatcggctgggcgatagcaccaccgcacctgacatgggg 591 |||||||| |||||||| ||||||||||| |||||||| || ||| | |||||||| Sbjct: 13291 tccttgactggatggaaaatcggctgggccatagcacctccacacttaacatgggg 13236 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 92 cctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaatattg 151 ||||| |||||| |||||||||| ||||||||||| |||||||| |||||||| | || Sbjct: 13735 cctgaaaaggaaattactgttacgtctgggtgcacggaagcaattgctgcaactgtgtta 13676 Query: 152 ggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttatgag 211 || |||| || || || ||||| || || ||||||| || || |||||||||||||| Sbjct: 13675 ggattgataaatcccggtgatgaggttatcgtgtttgcccctttttatgattcttatgaa 13616 Query: 212 gctacactgtccatggctggtgcgaatgtcaaagccattacacttcgccctccggacttt 271 || || | |||||||||||||| || || |||| ||| || || |||||||| || ||| Sbjct: 13615 gccactttatccatggctggtgcaaaagtaaaaggcatcactctgcgccctccagatttt 13556 Query: 272 gc 273 || Sbjct: 13555 gc 13554 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 92 cctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaatattg 151 |||||||| ||| ||||||||||| |||| |||||||||||||| |||||||| ||| Sbjct: 22633 cctgataaagaaattactgttacaactggttgcacagaagcaatcgctgcaactgcatta 22574 Query: 152 ggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttatgag 211 || | || || || || ||||| || || |||||||||| || ||||||||||||| Sbjct: 22573 ggatttataaatcccggtgatgaggttattttgtttgctcctttttatgattcttatggt 22514 Query: 212 gctacactgtccatggctggtgcga 236 || || | |||||||||||||||| Sbjct: 22513 gccactttatccatggctggtgcga 22489
>dbj|AB241456.1| Lotus japonicus TINod gene for transcription initiator for nodulation, complete cds Length = 23401 Score = 81.8 bits (41), Expect = 3e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 92 cctgataaggaagttactgttacatctgggtgcacagaagcaatagctgcaacaatattg 151 ||||| ||||||||||||||||||||||| ||||||||||||||| |||||| || || Sbjct: 11177 cctgaaaaggaagttactgttacatctggatgcacagaagcaatacttgcaactatgtta 11236 Query: 152 ggtctgatcaaccctggggatgaagtcatactgtttgctccattctatgattcttat 208 || | || || ||||| ||||| || || || |||||||| || |||||||||||| Sbjct: 11237 ggattaataaatcctggtgatgaggttatcctttttgctcctttttatgattcttat 11293 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 476 gcttctattcctggcatgtatgagaggaccgtcactatgaactccctggggaagacgttc 535 |||||| | ||||| |||| |||||| || || || |||||||| |||||||||| ||| Sbjct: 11562 gcttctttgcctggaatgtttgagagaacagtgacaatgaactctttggggaagacattc 11621 Query: 536 tccttgaccggatggaagatcggctgggcgatagcaccacc 576 ||||| || ||||||||| | || ||||| ||||||||||| Sbjct: 11622 tccttaacaggatggaaggtaggatgggccatagcaccacc 11662
>emb|BX816238.1|CNS0AD2A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH36ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1431 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 107 actgttacatctgggtgcacagaagcaatagctgcaacaatattgggtctgatcaaccct 166 |||||||||||||| ||||||||||| ||| ||||| | || |||||| | || || ||| Sbjct: 466 actgttacatctggttgcacagaagcgataactgcagcgatgttgggtttaataaaacct 525 Query: 167 ggggatgaagtcatactgtttgctccattctatgattcttatga 210 || |||||||| || || ||||| || || ||| |||| ||||| Sbjct: 526 ggtgatgaagtgattctctttgcaccgttttatcattcctatga 569 Score = 50.1 bits (25), Expect = 0.009 Identities = 113/141 (80%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 428 gatgaggtctacgacaagctggcgtttgaggcggatcacatatcaatggcttctattcct 487 ||||| || ||||| ||||| |||||||| ||||||||| | || |||||| |||| Sbjct: 787 gatgaagtatacgataagcttgcgtttgaaatggatcacatctttatagcttctcttccc 846 Query: 488 ggcatgtatgagaggaccgtcactatgaactccctggggaagacgttctccttgaccgga 547 || |||||||| || || || || ||||| | |||||| || || || || || |||||| Sbjct: 847 ggtatgtatgaaagaactgtgaccatgaattgcctgggaaaaactttttctttaaccgga 906 Query: 548 tgga-agatcggctgggcgat 567 |||| |||||||||||||||| Sbjct: 907 tggacagatcggctgggcgat 927
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 524 gggaagacgttctccttgaccggatggaagatcggctggg 563 |||||||| |||||| | ||||| |||||||||||||||| Sbjct: 646127 gggaagaccttctccgtcaccgggtggaagatcggctggg 646166
>ref|NM_114755.1| Arabidopsis thaliana structural constituent of ribosome AT3G48960 mRNA, complete cds Length = 621 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 ctcttgaagagctaaaggctgc 300 |||||||||||||||||||||| Sbjct: 224 ctcttgaagagctaaaggctgc 245
>gb|BC058809.1| Mus musculus RIKEN cDNA 1810074P20 gene, mRNA (cDNA clone IMAGE:6491288), partial cds Length = 5203 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 tccctggggaagacgttctcct 539 |||||||||||||||||||||| Sbjct: 1446 tccctggggaagacgttctcct 1467
>emb|AL831754.2| Mouse DNA sequence from clone RP23-295A1 on chromosome 4, complete sequence Length = 189029 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 tccctggggaagacgttctcct 539 |||||||||||||||||||||| Sbjct: 12468 tccctggggaagacgttctcct 12447
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 gccgatgaggtctacgacaag 445 ||||||||||||||||||||| Sbjct: 2284907 gccgatgaggtctacgacaag 2284927
>ref|XM_781709.1| PREDICTED: Strongylocentrotus purpuratus similar to Down syndrome cell adhesion molecule (LOC581722), mRNA Length = 4032 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 ctttgcagtccctcttgaaga 288 ||||||||||||||||||||| Sbjct: 127 ctttgcagtccctcttgaaga 107
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 527 aagacgttctccttgaccggatggaagatcggctggg 563 ||||||||||| || ||||| |||||| ||||||||| Sbjct: 119465 aagacgttctcgttcaccggctggaaggtcggctggg 119501
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 aataatgattaatacacctca 342 ||||||||||||||||||||| Sbjct: 112630 aataatgattaatacacctca 112650
>emb|AL050398.1|ATL23H3 Arabidopsis thaliana DNA chromosome 4, cosmid clone L23H3 (ESSA project) Length = 36270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 aataatgattaatacacctca 342 ||||||||||||||||||||| Sbjct: 14461 aataatgattaatacacctca 14481
>gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, complete sequence Length = 181253 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 ctgaattgaattcagctgttg 53 ||||||||||||||||||||| Sbjct: 167887 ctgaattgaattcagctgttg 167867
>gb|AC096542.2| Homo sapiens chromosome 1 clone RP11-332L18, complete sequence Length = 189411 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 ctgaattgaattcagctgttg 53 ||||||||||||||||||||| Sbjct: 56415 ctgaattgaattcagctgttg 56395
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cagctgttgctgagagatttc 65 ||||||||||||||||||||| Sbjct: 1638837 cagctgttgctgagagatttc 1638817
>gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, complete sequence Length = 179750 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tggggaagacgttctccttg 541 |||||||||||||||||||| Sbjct: 33819 tggggaagacgttctccttg 33800
>gb|AC123741.9| Mus musculus chromosome 1, clone RP24-113A5, complete sequence Length = 188453 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gcttctattcctggcatgta 495 |||||||||||||||||||| Sbjct: 66094 gcttctattcctggcatgta 66075
>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence Length = 219863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tggggaagacgttctccttg 541 |||||||||||||||||||| Sbjct: 196665 tggggaagacgttctccttg 196646
>emb|Z84487.2|HS346O6 Human DNA sequence from clone RP3-346O6 on chromosome Xq21 Contains the 5' end of the ATRX gene for alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), a fatty acid binding protein 9 , testis (FABP9) pseudogene and two CpG islands, complete sequence Length = 135982 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agctgttgctgagagatttctcaa 69 |||||||||||||||| ||||||| Sbjct: 8551 agctgttgctgagagacttctcaa 8528
>emb|AL355863.18| Human DNA sequence from clone RP11-479A21 on chromosome 10 Contains an HSPC023 protein (HSPC023) pseudogene, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 gaaaatgacgtgttgctctttgcc 427 ||||||||||||||| |||||||| Sbjct: 98178 gaaaatgacgtgttgttctttgcc 98201
>emb|AL138713.12| Human DNA sequence from clone RP11-552M6 on chromosome 13q21.31-22.2 Contains part of the KLF12 gene for Kruppel-like factor 12, complete sequence Length = 121896 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tccattctatgattcttatg 209 |||||||||||||||||||| Sbjct: 47201 tccattctatgattcttatg 47220
>emb|CR354432.6| Zebrafish DNA sequence from clone CH211-66E2 in linkage group 3, complete sequence Length = 193960 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 607 ctccttcctcacattcgccacctc 630 |||| ||||||||||||||||||| Sbjct: 112462 ctccatcctcacattcgccacctc 112485
>gb|AC097487.2| Homo sapiens BAC clone RP11-217C7 from 4, complete sequence Length = 165504 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 atctctgcaaggaaaatgac 412 |||||||||||||||||||| Sbjct: 165086 atctctgcaaggaaaatgac 165105
>gb|AC068792.31| Homo sapiens 12 BAC RP11-771K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106277 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tccctcttgaagagctaaag 295 |||||||||||||||||||| Sbjct: 9527 tccctcttgaagagctaaag 9546
>gb|AY084928.1| Arabidopsis thaliana clone 12182 mRNA, complete sequence Length = 845 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ctcttgaagagctaaaggctgcag 302 ||||||||||||| |||||||||| Sbjct: 292 ctcttgaagagctcaaggctgcag 315
>gb|AC125376.3| Homo sapiens BAC clone RP11-637G12 from 4, complete sequence Length = 75852 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 atctctgcaaggaaaatgac 412 |||||||||||||||||||| Sbjct: 1582 atctctgcaaggaaaatgac 1601
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 tgaccggatggaagatcggctggg 563 ||||||| |||||||||||||||| Sbjct: 648060 tgaccggctggaagatcggctggg 648083
>dbj|BS000168.2| Pan troglodytes chromosome 22 clone:RP43-021P14, map 22, complete sequences Length = 184554 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ttctattcctggcatgtatg 497 |||||||||||||||||||| Sbjct: 52863 ttctattcctggcatgtatg 52844
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gcagtccctcttgaagagct 291 |||||||||||||||||||| Sbjct: 487961 gcagtccctcttgaagagct 487942 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,041,961 Number of Sequences: 3902068 Number of extensions: 5041961 Number of successful extensions: 89413 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89185 Number of HSP's gapped (non-prelim): 222 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
