ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HORN_HUMAN (Q86YZ3) Hornerin 35 0.11
2TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein 34 0.33
3PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC... 31 2.2
4DPOL_TUHV2 (Q9YUS2) DNA polymerase (EC 2.7.7.7) 31 2.8
5NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kin... 30 6.3
6HYAL2_HUMAN (Q12891) Hyaluronidase-2 precursor (EC 3.2.1.35) (Hy... 29 8.2
7DPOL_TUHV1 (Q9YUS3) DNA polymerase (EC 2.7.7.7) 29 8.2
8BUR1_CANAL (Q9Y7W4) Serine/threonine-protein kinase BUR1 (EC 2.7... 29 8.2

>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 200  SNGFRHHAPTPFQD---THHEPSSSSGIWYDQPASPASAASTGERHIQGQGEAQSW 358
            S+GF HH  + +Q    T H   S     Y+Q  S +  +S GERH    G + S+
Sbjct: 2338 SSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSY 2393



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 200  SNGFRHHAPTPFQD---THHEPSSSSGIWYDQPASPASAASTGERHIQGQGEAQSW 358
            S+GF HH  + +Q    T H   S     Y+Q  S +  +S GERH    G + S+
Sbjct: 1398 SSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSY 1453



 Score = 33.9 bits (76), Expect = 0.33
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 200  SNGFRHHAPTPFQD---THHEPSSSSGIWYDQPASPASAASTGERHIQGQGEAQSW 358
            S+GF HH  + +Q    T H   S     Y+Q  S +  +S GE+H    G + S+
Sbjct: 1868 SSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSY 1923



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>TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein|
          Length = 1723

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
 Frame = +2

Query: 248 HEPSSSSGIWYDQPASPASAASTGERHIQGQGEAQSWDASEA*RHSEEGGRAC----HCX 415
           ++P+SS+G W +Q   P           QG  +A  W  S +   SE GG++        
Sbjct: 529 NQPNSSTGAWDNQKGHPLP-------ENQGNAQAPCWGRSSSSTGSEVGGQSTGSNHKAG 581

Query: 416 XXXXXXXXXXXHRAYYSDCRVLSQVLYSST 505
                      +R  + DC+ + Q L S T
Sbjct: 582 SSDSHNSGRRSYRPTHPDCQAVLQTLLSRT 611



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>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +2

Query: 176 ESPRQPRWSNGFRHHAPTPFQDTHHEPSSSSGIWYDQPASPASAASTG 319
           +SP  P  SN     +P+     HH   SSS  +   P SP S  S+G
Sbjct: 97  QSPTSPHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPTSPTSSG 144



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>DPOL_TUHV2 (Q9YUS2) DNA polymerase (EC 2.7.7.7)|
          Length = 1171

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -1

Query: 459 YARWLHDDHGQRRRSQQWQARPPSSL*RYASEASQL*ASP-----CPWMCRSPVLAAEAG 295
           Y+ WL DD G   R  +  ARPP +     S A+     P      P+   + V AA AG
Sbjct: 638 YSTWLRDDPGTPARPPETPARPPETPAAGPSGAAHAGGVPGATFRTPFRTPAGVPAAAAG 697

Query: 294 DAG 286
            AG
Sbjct: 698 GAG 700



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>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor|
            protein 550) (AKAP 550) (dAKAP550)
          Length = 3584

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 206  GFRHHAPTPFQDTHHEPSSSSGIWYDQPASPASAASTGERHIQ 334
            G + H+PTP   TH   SS+S     QPAS +S +S   +  Q
Sbjct: 2061 GQQQHSPTPLA-THSTSSSASSTATSQPASSSSLSSLASQSQQ 2102



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>HYAL2_HUMAN (Q12891) Hyaluronidase-2 precursor (EC 3.2.1.35) (Hyal-2)|
           (Hyaluronoglucosaminidase-2) (LUCA-2)
          Length = 473

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
 Frame = -2

Query: 290 LAGHTRCHC--------CCWAHGECLGKASEHDA*SHWTTL 192
           L  H RC C        C W H +  G ASE  A SH T+L
Sbjct: 421 LQTHFRCQCYLGWSGEQCQWDHRQAAGGASEAWAGSHLTSL 461



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>DPOL_TUHV1 (Q9YUS3) DNA polymerase (EC 2.7.7.7)|
          Length = 1171

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -1

Query: 459 YARWLHDDHGQRRRSQQWQARPPSSL*RYASEASQL*ASP-----CPWMCRSPVLAAEAG 295
           Y+ WL DD G   R  +  ARPP +     S A+     P      P+   + V AA AG
Sbjct: 638 YSTWLRDDPGTPARPPETPARPPETPAAGPSGAAHAGGVPGATFRTPFRTPAGVPAAAAG 697

Query: 294 DAG 286
             G
Sbjct: 698 GVG 700



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>BUR1_CANAL (Q9Y7W4) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 746

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 245 HHEPSSSSGIWYDQPASPASAASTGERHIQGQGEAQSWDASE 370
           HH P S+    YD P+ P + A   E HI      + ++  E
Sbjct: 7   HHVPRSNDQRQYDTPSVPINIAPDSEGHIHEMSRLKDYEVIE 48


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,034,649
Number of Sequences: 219361
Number of extensions: 996938
Number of successful extensions: 3108
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3102
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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