>YIPF5_MOUSE (Q9EQQ2) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A)
          Length = 257

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 41/99 (41%), Positives = 55/99 (55%)
 Frame = +3

Query: 252 PPIFTGPIGGSGASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXX 431
           PP    P  G   SFE+EPPLLEELGIN   IW+KTL++LHPLR+AD S+  + D     
Sbjct: 74  PPTTPQPFYGD--SFEEEPPLLEELGINFDHIWQKTLTVLHPLRAADGSIMNETDLAGPV 131

Query: 432 XXXXXXXXXXXXAGKFHFGIVLGWVTVASLFLYFVLSML 548
                       AGK  FG V G   +  L ++ +L+++
Sbjct: 132 VFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLM 170

>YIPF5_MACFA (Q4R5M4) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 38/88 (43%), Positives = 51/88 (57%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G SFEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNSFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L ++ +L+++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMFCLLNLM 170

>YIPF5_XENLA (Q7SXS2) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 256

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/88 (42%), Positives = 52/88 (59%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G++F+DEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 141

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L +Y +L+++
Sbjct: 142 LAGKIQFGYVYGISAMGCLGMYCLLNLM 169

>YIPF5_RAT (Q5XID0) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A)
          Length = 257

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/88 (42%), Positives = 52/88 (59%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G SFE+EPPLLEELGIN   IW+KTL++LHPLR++D S+  + D                
Sbjct: 83  GDSFEEEPPLLEELGINFDHIWQKTLTVLHPLRASDGSIMNETDLAGPVVFCLAFGATLL 142

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L ++ +L+++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMFCLLNLM 170

>YIPF5_XENTR (Q66KA5) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 256

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 36/88 (40%), Positives = 52/88 (59%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G++F+DEPPLLEELGIN   IW+KTL++LHPL+ AD ++  + D                
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLL 141

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L +Y +L+++
Sbjct: 142 LAGKIQFGYVYGISAIGCLGMYCLLNLM 169

>YIPF5_BRARE (Q6P5I8) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
 Frame = +3

Query: 255 PIFTGPIGGS--GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXX 428
           P FT     S   +SFEDEPPLLEELGIN   IW+KTL++LHPL+++D S+  + D    
Sbjct: 71  PAFTPTSSQSMYSSSFEDEPPLLEELGINFDHIWQKTLTVLHPLKASDGSIMNETDLAGP 130

Query: 429 XXXXXXXXXXXXXAGKFHFGIVLGWVTVASLFLYFVLSML 548
                         GK  FG V G   +  L +Y +L+++
Sbjct: 131 MVFCLAFGATLLLTGKIQFGYVYGISAIGCLGMYCLLNLM 170

>YIPF5_PONPY (Q5R6W5) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 37/88 (42%), Positives = 51/88 (57%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G +FEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L ++ +L+++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMFCLLNLM 170

>YIPF5_HUMAN (Q969M3) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A) (Five-pass transmembrane
           protein localizing in the Golgi apparatus and the
           endoplasmic reticulum 5) (Smooth muscle cell-associated
           protein 5) (SMAP-5)
          Length = 257

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 37/88 (42%), Positives = 51/88 (57%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G +FEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L ++ +L+++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMFCLLNLM 170

>YIPF5_BOVIN (Q5E9E8) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 37/88 (42%), Positives = 51/88 (57%)
 Frame = +3

Query: 285 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 464
           G +FEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 465 XAGKFHFGIVLGWVTVASLFLYFVLSML 548
            AGK  FG V G   +  L ++ +L+++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMFCLLNLM 170

>YCB4_SCHPO (O94348) Uncharacterized protein C61.04c|
          Length = 227

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 29/89 (32%), Positives = 42/89 (47%)
 Frame = +3

Query: 282 SGASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXX 461
           S + +  EP LLEEL IN   I +KT  +L+P +  D  +  D D               
Sbjct: 50  STSGYPGEPSLLEELEINFGHIKQKTTHVLNPFKHVDVHIMDDTDMAGPILFCLLFSTFL 109

Query: 462 XXAGKFHFGIVLGWVTVASLFLYFVLSML 548
              G+ HFG + G   + SL L+FVL ++
Sbjct: 110 SLHGRSHFGYIYGIALLGSLSLHFVLRLM 138

>YIP1_YEAST (P53039) Protein YIP1 (YPT-interacting protein 1)|
          Length = 248

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +3

Query: 282 SGASFEDEPPLLEELGINTRQIWRKTLSILHPLR---SADPSLHADADXXXXXXXXXXXX 452
           S   +  EPPLLEE+GIN   I  KT  +L P+R        +  D+D            
Sbjct: 63  STKGYPHEPPLLEEIGINFDHIITKTKMVLIPIRFGSGVPQEILNDSDLAGPLIFFLLFG 122

Query: 453 XXXXXAGKFHFGIVLGWVTVASLFLY 530
                AGK HFG + G     ++ L+
Sbjct: 123 LFLLMAGKVHFGYIYGVALFGTISLH 148

>TINF2_MOUSE (Q9QXG9) TERF1-interacting nuclear factor 2 (TRF1-interacting|
           nuclear protein 2)
          Length = 341

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 207 LPFMSFDIPAQSNSTPPIFTGPIGGSGASFEDEPPLLEELGINTRQIWRKTLSILHP 377
           LPF +  +PAQ  S P     P   S AS   EP   EE    +R + ++ L    P
Sbjct: 275 LPFRNMGLPAQDLSNPKSREEPGAASAASVGTEPVCTEEAKTPSRPLGKRALEETPP 331

>PUR9_MYCPA (Q9RAJ5) Bifunctional purine biosynthesis protein purH [Includes:|
           Phosphoribosylaminoimidazolecarboxamide
           formyltransferase (EC 2.1.2.3) (AICAR transformylase);
           IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
           synthetase) (ATIC)]
          Length = 527

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 499 PRTIPKWNLPARSWKRPKDKRNRKGPERSASAWSDGSA 386
           P T PKW    RSW+R    R  + P + AS +SD  A
Sbjct: 210 PTTFPKWL--GRSWRRSAMLRYGENPHQQASLYSDPGA 245

>STP7_ARATH (O04249) Sugar transport protein 7 (Hexose transporter 7)|
          Length = 513

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
 Frame = +3

Query: 477 FHFGIVL---GWVTVASLFLYFVL 539
           F FGI L   GWVTV ++F+YF+L
Sbjct: 450 FKFGIFLFFAGWVTVMTIFVYFLL 473

>COBB_RHOCA (O68108) Cobyrinic acid A,C-diamide synthase|
          Length = 435

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 305 LVFEGGTGAADGPGEDGRRGVGLS 234
           ++FEG  G  DGP + GR G G S
Sbjct: 86  VIFEGAMGLYDGPADPGRSGRGTS 109

>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16|
          Length = 767

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 2   TPRSSQLPRSRNPRGRRGHGEGAPVFPATGGLQPLHT 112
           TP SS + ++  PRGRR    GA   P+   L+P  T
Sbjct: 99  TPESSPVRKAPRPRGRRTRSSGASHQPSPTELRPTLT 135

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
            (Trithorax homolog 2)
          Length = 2715

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 550  RSMDKTK*RKREATVTHPRTIPKWNLPARSWKRPKDKRNRKGPERSASA 404
            R  DK + RK E      RTI K  LP  S + P+      GP R A A
Sbjct: 1003 RKCDKIEARKMERLAKKGRTIVKTLLPWDSDESPEASPGPPGPRRGAGA 1051


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,822,206
Number of Sequences: 219361
Number of extensions: 911407
Number of successful extensions: 4765
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4755
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)