ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart19f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X15693.1|HVLP58 Barley mRNA for chloroplast high molecular m... 430 e-117
2ref|NM_188763.1| Oryza sativa (japonica cultivar-group), predic... 135 2e-28
3gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 135 2e-28
4dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
7ref|XM_476845.1| Oryza sativa (japonica cultivar-group), mRNA 119 1e-23
8ref|XM_476844.1| Oryza sativa (japonica cultivar-group), mRNA 119 1e-23
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
10dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
11emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular ma... 109 1e-20
12emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular ma... 103 6e-19
13gb|AF365951.1|AF365951 Zea mays early light-inducible protein EL... 100 9e-18
14dbj|AB019617.1| Triticum aestivum wcr (wheat cold-regulated) 12 ... 94 6e-16
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
16dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
17gb|AF017356.1|AF017356 Oryza sativa low molecular early light-in... 80 9e-12
18ref|XM_468708.1| Oryza sativa (japonica cultivar-group), mRNA 78 3e-11
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 3e-11
20gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 78 3e-11
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
22gb|AF017357.1|AF017357 Oryza sativa low molecular early light-in... 70 8e-09
23emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
25emb|AJ234846.1|HVU234846 Hordeum vulgare genomic DNA fragment; c... 54 5e-04
26dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 46 0.12
27ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubu... 44 0.47
28gb|AC146018.3| Pan troglodytes BAC clone RP43-135A21 from 7, com... 42 1.9
29gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome... 42 1.9
30gb|AC007000.2| Homo sapiens BAC clone RP11-467H10 from 7, comple... 42 1.9
31gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.9
32gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, compl... 42 1.9
33gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, comple... 42 1.9
34gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.9
35gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B... 42 1.9
36gb|AY847686.1| Dunaliella salina chloroplast carotene biosynthes... 42 1.9
37dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.9
38emb|X05867.1|HSRN5SP2 Human 5S ribosomal RNA pseudogene 42 1.9
39gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 40 7.4
40gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.4
41gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 7.4
42emb|AJ578506.1|EGU578506 Elaeis guineensis microsatellite DNA, c... 40 7.4
43emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chloro... 40 7.4
44gb|AE014266.1| Streptococcus agalactiae 2603V/R section 76 of 10... 40 7.4
45emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
46emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complet... 40 7.4
47gb|AE005871.1| Caulobacter crescentus CB15 section 197 of 359 of... 40 7.4
48emb|AL121750.22|HSJ323A24 Human DNA sequence from clone RP3-323A... 40 7.4
49dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
50dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.4
51dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
52dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
53emb|AJ414383.1|RSO414383 Ralstonia solanacearum partial mutS gene 40 7.4
54dbj|AK120621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
55dbj|AK072084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
56emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.4
57emb|Z54072.1|HSL261H12 Human DNA sequence from clone LA04NC01-26... 40 7.4 
>emb|X15693.1|HVLP58 Barley mRNA for chloroplast high molecular mass early
           light-inducible protein (ELIP) (clone HV58)
          Length = 860

 Score =  430 bits (217), Expect = e-117
 Identities = 265/277 (95%), Gaps = 3/277 (1%)
 Strand = Plus / Plus

                                                                       
Query: 273 cacgagcccgtccccgaccccgatcccggcagcacccaagcccatgaccaagaaggctaa 332
           ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 367 cacgagcccgtccccgaccacgatcccggcagcacccaagcccgtgaccaagaaggctaa 426

                                                                       
Query: 333 cccctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccg 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cccctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccg 486

                                                                       
Query: 393 gctggccatggtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggct 452
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 487 gctggccatggtaggcttcgtggctgcgctgtccgtcgaggcggcgcgtggcggtgggct 546

                                                                       
Query: 453 cctcgaccaggccggca-gtgg-cg-ccgggctgggctggttcctggcgaccgcaggggt 509
           ||||||||||| ||||| |||| || |||||||||  ||||| |||||||||||||||||
Sbjct: 547 cctcgaccaggtcggcatgtggtcgtccgggctggcgtggtttctggcgaccgcaggggt 606

                                                
Query: 510 tttctccctagcgtcgctggtgccgctgctgcagggc 546
           ||||||| ||||||||||| |||||||||||||||||
Sbjct: 607 tttctccgtagcgtcgctgctgccgctgctgcagggc 643



 Score =  325 bits (164), Expect = 9e-86
 Identities = 176/180 (97%)
 Strand = Plus / Plus

                                                                       
Query: 31  accatcgatcttagcaagcagcaccttctctagttctcttcttgcgctagcttttctctg 90
           |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  accaccgatcttagcaaggagcaccttctctagttctcttcttgcgctagcttttctctg 73

                                                                       
Query: 91  ccttgagtgatggcgaccatggtggctttgagctccttcgccgttgttggcctgtcggcc 150
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 74  ccttgagtgatggcgaccatggtggctttgagctccttcgccgttgttggccggtccgcc 133

                                                                       
Query: 151 gcccgttctccagtggtggccccgcgccggcgcaccctcgtcgtcagggcccagaccgag 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gcccgttctccagtggtggccccgcgccggcgcaccctcgtcgtcagggcccagaccgag 193



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 209 agcctgacatggactcagccaaggagacgacgagcgcgtcgac 251
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agcctgacatggactcagccaaggagacgacgagcgcgtcgac 345
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>ref|NM_188763.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 271 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 330

                                                                       
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
           || || |||||| |||||||| |||| |||||| |||| ||||| |||||||| ||||||
Sbjct: 331 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 390

                   
Query: 463 gccggcag 470
           ||||||||
Sbjct: 391 gccggcag 398



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 121 ctcgtcgtcagggcccagtccgagcc 146



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 gcgtcgctggtgccgctgct 539
           ||||||||||||||||||||
Sbjct: 448 gcgtcgctggtgccgctgct 467
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 25483 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 25542

                                                                         
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
             || || |||||| |||||||| |||| |||||| |||| ||||| |||||||| ||||||
Sbjct: 25543 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 25602

                     
Query: 463   gccggcag 470
             ||||||||
Sbjct: 25603 gccggcag 25610



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gcgtcgctggtgccgctgct 539
             ||||||||||||||||||||
Sbjct: 25660 gcgtcgctggtgccgctgct 25679



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 25240 ctcgtcgtcagggcccagtccgag 25263
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>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 58021 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 58080

                                                                         
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
             || || |||||| |||||||| |||| |||||| |||| ||||| |||||||| ||||||
Sbjct: 58081 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 58140

                     
Query: 463   gccggcag 470
             ||||||||
Sbjct: 58141 gccggcag 58148



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gcgtcgctggtgccgctgct 539
             ||||||||||||||||||||
Sbjct: 58198 gcgtcgctggtgccgctgct 58217



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 57778 ctcgtcgtcagggcccagtccgag 57801
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 8061370 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 8061429

                                                                           
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
               || || |||||| |||||||| |||| |||||| |||| ||||| |||||||| ||||||
Sbjct: 8061430 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 8061489

                       
Query: 463     gccggcag 470
               ||||||||
Sbjct: 8061490 gccggcag 8061497



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 520     gcgtcgctggtgccgctgct 539
               ||||||||||||||||||||
Sbjct: 8061547 gcgtcgctggtgccgctgct 8061566



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     ctcgtcgtcagggcccagaccgag 210
               |||||||||||||||||| |||||
Sbjct: 8061127 ctcgtcgtcagggcccagtccgag 8061150
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>dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E06, full
           insert sequence
          Length = 942

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 420 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 479

                                                                       
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
           || || |||||| |||||||| |||| |||||| |||| ||||| |||||||| ||||||
Sbjct: 480 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 539

                   
Query: 463 gccggcag 470
           ||||||||
Sbjct: 540 gccggcag 547



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 270 ctcgtcgtcagggcccagtccgagcc 295



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 gcgtcgctggtgccgctgct 539
           ||||||||||||||||||||
Sbjct: 597 gcgtcgctggtgccgctgct 616
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>ref|XM_476845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 226 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 285

                                                                       
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
           || || |||||| |||||||  |||| |||||| |||| ||||| |||||||| || |||
Sbjct: 286 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcag 345

                   
Query: 463 gccggcag 470
           ||||||||
Sbjct: 346 gccggcag 353



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 97  ctcgtcgtcagggcccaggccgagcc 122



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 gcgtcgctggtgccgctgct 539
           ||||||||||||||||||||
Sbjct: 403 gcgtcgctggtgccgctgct 422
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>ref|XM_476844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 265 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 324

                                                                       
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
           || || |||||| |||||||  |||| |||||| |||| ||||| |||||||| || |||
Sbjct: 325 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcctggagcag 384

                   
Query: 463 gccggcag 470
           ||||||||
Sbjct: 385 gccggcag 392



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 130 ctcgtcgtcagggcccaggccgagcc 155
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 4178496 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 4178555

                                                                           
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
               || || |||||| |||||||  |||| |||||| |||| ||||| |||||||| || |||
Sbjct: 4178556 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcag 4178615

                       
Query: 463     gccggcag 470
               ||||||||
Sbjct: 4178616 gccggcag 4178623



 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 4176055 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 4176114

                                                                           
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
               || || |||||| |||||||  |||| |||||| |||| ||||| |||||||| || |||
Sbjct: 4176115 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcctggagcag 4176174

                       
Query: 463     gccggcag 470
               ||||||||
Sbjct: 4176175 gccggcag 4176182



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 520     gcgtcgctggtgccgctgct 539
               ||||||||||||||||||||
Sbjct: 4178673 gcgtcgctggtgccgctgct 4178692



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     ctcgtcgtcagggcccagaccgag 210
               |||||||||||||||||| |||||
Sbjct: 4178272 ctcgtcgtcagggcccaggccgag 4178295



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     ctcgtcgtcagggcccagaccgag 210
               |||||||||||||||||| |||||
Sbjct: 4175840 ctcgtcgtcagggcccaggccgag 4175863
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>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1361_E02
          Length = 100168

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 62118 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 62177

                                                                         
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
             || || |||||| |||||||  |||| |||||| |||| ||||| |||||||| || |||
Sbjct: 62178 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcag 62237

                     
Query: 463   gccggcag 470
             ||||||||
Sbjct: 62238 gccggcag 62245



 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 59677 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 59736

                                                                         
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
             || || |||||| |||||||  |||| |||||| |||| ||||| |||||||| || |||
Sbjct: 59737 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcctggagcag 59796

                     
Query: 463   gccggcag 470
             ||||||||
Sbjct: 59797 gccggcag 59804



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gcgtcgctggtgccgctgct 539
             ||||||||||||||||||||
Sbjct: 62295 gcgtcgctggtgccgctgct 62314



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 61894 ctcgtcgtcagggcccaggccgag 61917



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 59462 ctcgtcgtcagggcccaggccgag 59485
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>emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular mass early
           light-inducible protein (ELIP) (clone HV60)
          Length = 764

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 341 tctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggcca 400
           ||||||||||| | |||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 290 tctgggacgcgatggcgttcagcggccctgcgccggagcgcatcaacgggcggctagcca 349

                                  
Query: 401 tggtaggcttcgtggcggcgctg 423
           |||| ||||||||| ||||||||
Sbjct: 350 tggtgggcttcgtgacggcgctg 372



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 520 gcgtcgctggtgccgctgctgcagggc 546
           |||||||||||||||||||| ||||||
Sbjct: 469 gcgtcgctggtgccgctgctccagggc 495



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 accctcgtcgtcagggcccagaccgag 210
           ||||||||||||||||| |||||||||
Sbjct: 217 accctcgtcgtcagggcacagaccgag 243



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 100 atggcgaccatggtggctttgagctccttcgccg 133
           |||||||||||| ||||  |||||||||||||||
Sbjct: 127 atggcgaccatgatggccatgagctccttcgccg 160
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>emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early
           light-inducible protein (ELIP) (clone HV90)
          Length = 660

 Score =  103 bits (52), Expect = 6e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                       
Query: 335 cctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggc 394
           ||||| ||||||||| | | |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 203 cctcgatctgggacgagatggcgttcagcggccctgcgccggagcgcatcaacgggcggc 262

                                       
Query: 395 tggccatggtaggcttcgtggcggcgct 422
           | |||||||| ||||||||| |||||||
Sbjct: 263 tagccatggtgggcttcgtgacggcgct 290



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 520 gcgtcgctggtgccgctgctgcagggc 546
           |||||||||||||||||||| ||||||
Sbjct: 388 gcgtcgctggtgccgctgctccagggc 414



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 176 gccggcgcaccctcgtcgtcagggcccagaccgag 210
           |||| ||| |||||||||||||||| |||||||||
Sbjct: 128 gccgacgcgccctcgtcgtcagggcacagaccgag 162
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>gb|AF365951.1|AF365951 Zea mays early light-inducible protein ELIP mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 852

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                       
Query: 341 tctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggcca 400
           ||||||||||||| ||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 316 tctgggacgcgctggcgttcagcgggcccgcgccggagcggatcaacgggcggctggcga 375

                                             
Query: 401 tggtaggcttcgtggcggcgctgtccgtcgaggc 434
           |||| ||||||||| | |||||  ||||||||||
Sbjct: 376 tggtgggcttcgtgtccgcgctcgccgtcgaggc 409
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>dbj|AB019617.1| Triticum aestivum wcr (wheat cold-regulated) 12 mRNA for early
           light-inducible protein (ELIP), complete cds
          Length = 818

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                       
Query: 341 tctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggcca 400
           ||||||||||||| |||||||||||||| |||||||||||||| || || || |||||||
Sbjct: 299 tctgggacgcgctggcgttcagcggccctgcgccggagcgcattaatgggcgcctggcca 358

                                                                  
Query: 401 tggtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcct 455
           |||| || |||||| |||||||  |||| ||||| | ||| ||||  ||||||||
Sbjct: 359 tggtgggtttcgtgacggcgctcgccgtggaggcagggcgcggcgacgggctcct 413



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 ccctcgtcgtcagggcccagaccg 208
           |||||||||||||||| |||||||
Sbjct: 227 ccctcgtcgtcagggcacagaccg 250
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||  |||||||| |||||||| |||
Sbjct: 9470816 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcggctggcgatg 9470757

                                                     
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcg 440
               || || |||||| |||||||  |||| |||||| ||||
Sbjct: 9470756 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcg 9470719
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>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0006C08
          Length = 151987

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||  |||||||| |||||||| |||
Sbjct: 84377 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcggctggcgatg 84318

                                                   
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcg 440
             || || |||||| |||||||  |||| |||||| ||||
Sbjct: 84317 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcg 84280
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>gb|AF017356.1|AF017356 Oryza sativa low molecular early light-inducible protein mRNA,
           complete cds
          Length = 818

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 107/128 (83%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||| ||| ||||||||||| || |||||||| |||||||| |||
Sbjct: 330 tgggacgtgctggcgttcaacgggccggcgccggaacggatcaacgggcggctggcgatg 389

                                                                       
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
           || || |||||| |||||||  |||| || ||| | || ||||| |||||||| || |||
Sbjct: 390 gtggggttcgtgtcggcgctcgccgtggaagcgtcccggggcggcgggctcctgga-cag 448

                   
Query: 463 gccggcag 470
           ||||||||
Sbjct: 449 gccggcag 456



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 201 ctcgtcgtcagggcccaggccgagcc 226
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>ref|XM_468708.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 669

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 250 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 309

                                                              
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
           || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 310 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 360



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 130 ctcgtcgtcagggcccaggccgagcc 155
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                            
Query: 343      tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
                ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 17148521 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 17148462

                                                                   
Query: 403      gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
                || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 17148461 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 17148411



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      ctcgtcgtcagggcccagaccgag 210
                |||||||||||||||||| |||||
Sbjct: 17148744 ctcgtcgtcagggcccaggccgag 17148721
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 39914 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 39855

                                                                
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
             || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 39854 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 39804



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 40137 ctcgtcgtcagggcccaggccgag 40114
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                            
Query: 343      tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
                ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 17142090 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 17142031

                                                                   
Query: 403      gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
                || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 17142030 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 17141980



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      ctcgtcgtcagggcccagaccgag 210
                |||||||||||||||||| |||||
Sbjct: 17142313 ctcgtcgtcagggcccaggccgag 17142290
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>gb|AF017357.1|AF017357 Oryza sativa low molecular early light-inducible protein mRNA,
           complete cds
          Length = 883

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 105/127 (82%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||| ||| ||||||||||| || |||||||| |||||||| |||
Sbjct: 395 tgggacgtgctggcgttca-cgggccggcgccggaacggatcaacgggcggctggcgatg 453

                                                                       
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcctcgaccag 462
           || || |||||| | |||||| |||| || ||| | || ||||| ||||||||  |||| 
Sbjct: 454 gtggggttcgtgtccgcgctggccgtggaagcgtctcgcggcggcgggctcctgaaccaa 513

                  
Query: 463 gccggca 469
           |||||||
Sbjct: 514 gccggca 520
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>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
              complete sequence
          Length = 142814

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 343    tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
              ||||||| ||| ||||||||||| |||||||||||||  |||||| | |||||||| |||
Sbjct: 137716 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 137657

                         
Query: 403    gtaggcttcgt 413
              || || |||||
Sbjct: 137656 gtggggttcgt 137646
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 343      tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
                ||||||| ||| ||||||||||| |||||||||||||  |||||| | |||||||| |||
Sbjct: 11129061 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 11129002

                           
Query: 403      gtaggcttcgt 413
                || || |||||
Sbjct: 11129001 gtggggttcgt 11128991



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 430      gaggcggcgcgtggcggtgggctc 453
                ||||||||||||||||| ||||||
Sbjct: 26181865 gaggcggcgcgtggcggcgggctc 26181842
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>emb|AJ234846.1|HVU234846 Hordeum vulgare genomic DNA fragment; clone MWG2224
          Length = 393

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 172 ccgcgccggcgcaccctcgtcgtcagggcccagaccgag 210
           ||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 119 ccgcgtcggcgcgccctcctcgtcagggcccagaccgag 81



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 104 cgaccatggtggctttgagctccttcgccg 133
           |||||||||| || ||||||||||||||||
Sbjct: 193 cgaccatggttgccttgagctccttcgccg 164
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 473     gcgccgggctgggctggttcctggcgaccgc 503
               ||||||||| ||||||| |||||||||||||
Sbjct: 2487059 gcgccgggccgggctggatcctggcgaccgc 2487089
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>ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubulin cofactor D
            (LOC455000), mRNA
          Length = 21183

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 99   gatggcgaccatggtggctttg 120
            ||||||||||||||||||||||
Sbjct: 6852 gatggcgaccatggtggctttg 6873
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>gb|AC146018.3| Pan troglodytes BAC clone RP43-135A21 from 7, complete sequence
          Length = 177841

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   gccggcagtggcgccgggctg 483
             |||||||||||||||||||||
Sbjct: 85452 gccggcagtggcgccgggctg 85472
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>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence
          Length = 201510

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   agaccgagcctgacatggact 223
             |||||||||||||||||||||
Sbjct: 94986 agaccgagcctgacatggact 94966
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>gb|AC007000.2| Homo sapiens BAC clone RP11-467H10 from 7, complete sequence
          Length = 196660

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     caccttctctagttctcttct 72
              |||||||||||||||||||||
Sbjct: 105574 caccttctctagttctcttct 105554
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 348     cgcgctcgcgttcagcggcccggcg 372
               |||||||||||||| ||||||||||
Sbjct: 2577378 cgcgctcgcgttcaacggcccggcg 2577354
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>gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, complete sequence
          Length = 174133

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 463    gccggcagtggcgccgggctg 483
              |||||||||||||||||||||
Sbjct: 145084 gccggcagtggcgccgggctg 145064
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>gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, complete sequence
          Length = 161470

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    caccttctctagttctcttct 72
             |||||||||||||||||||||
Sbjct: 12059 caccttctctagttctcttct 12039
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 231     ggagacgacgagcgcgtcgac 251
               |||||||||||||||||||||
Sbjct: 2657352 ggagacgacgagcgcgtcgac 2657332
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>gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B21, complete sequence
          Length = 176875

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   gccggcagtggcgccgggctg 483
             |||||||||||||||||||||
Sbjct: 90685 gccggcagtggcgccgggctg 90705
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>gb|AY847686.1| Dunaliella salina chloroplast carotene biosynthesis related protein
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 986

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 381 catcaacggccggctggccatggtaggcttcgt 413
           |||||||||||| ||||||||| | ||||||||
Sbjct: 319 catcaacggccgcctggccatgttgggcttcgt 351
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 281     cgtccccgaccccgatcccggcagc 305
               |||||||| ||||||||||||||||
Sbjct: 3367129 cgtccccgcccccgatcccggcagc 3367153
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>emb|X05867.1|HSRN5SP2 Human 5S ribosomal RNA pseudogene
          Length = 413

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 463 gccggcagtggcgccgggctg 483
           |||||||||||||||||||||
Sbjct: 204 gccggcagtggcgccgggctg 184
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>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   cgcatcaacggccggctggc 398
             ||||||||||||||||||||
Sbjct: 85127 cgcatcaacggccggctggc 85108
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 379     cgcatcaacggccggctggccatg 402
               ||||||||||||| ||||||||||
Sbjct: 2235462 cgcatcaacggcctgctggccatg 2235485
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      gtgatggcgaccatggtggc 116
               ||||||||||||||||||||
Sbjct: 1653246 gtgatggcgaccatggtggc 1653265
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>emb|AJ578506.1|EGU578506 Elaeis guineensis microsatellite DNA, clone mEgCIR0195
          Length = 272

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 53 accttctctagttctcttct 72
          ||||||||||||||||||||
Sbjct: 95 accttctctagttctcttct 76
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>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein
            of photosystem II
          Length = 7650

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  aacggccggctggccatggt 404
            ||||||||||||||||||||
Sbjct: 6983 aacggccggctggccatggt 7002



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 aacggccggctggccatggt 404
           ||||||||||||||||||||
Sbjct: 199 aacggccggctggccatggt 218
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>gb|AE014266.1| Streptococcus agalactiae 2603V/R section 76 of 100 of the complete
             genome
          Length = 23817

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    gtgatggcgaccatggtggc 116
             ||||||||||||||||||||
Sbjct: 22074 gtgatggcgaccatggtggc 22093
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>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09,
             complete sequence
          Length = 117443

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   gaggcggcgcgtggcggtgggctc 453
             ||||||||||||||||| ||||||
Sbjct: 69050 gaggcggcgcgtggcggcgggctc 69027
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>emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complete genome, segment 10
          Length = 174050

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     gtgatggcgaccatggtggc 116
              ||||||||||||||||||||
Sbjct: 128730 gtgatggcgaccatggtggc 128749
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>gb|AE005871.1| Caulobacter crescentus CB15 section 197 of 359 of the complete genome
          Length = 10070

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 415  gcggcgctgtccgtcgaggcggcg 438
            ||||||||| ||||||||||||||
Sbjct: 5127 gcggcgctggccgtcgaggcggcg 5104
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>emb|AL121750.22|HSJ323A24 Human DNA sequence from clone RP3-323A24 on chromosome 4, complete
              sequence
          Length = 149969

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cagggcccagaccgagcctg 214
              ||||||||||||||||||||
Sbjct: 107337 cagggcccagaccgagcctg 107356
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      ctcgtcgtcagggcccagaccgag 210
                |||||||||||||||||| |||||
Sbjct: 25697531 ctcgtcgtcagggcccaggccgag 25697508



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 280     ccgtccccgaccccgatccc 299
               ||||||||||||||||||||
Sbjct: 6809236 ccgtccccgaccccgatccc 6809217
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     gccggcgcaccctcgtcgtc 195
               ||||||||||||||||||||
Sbjct: 2354999 gccggcgcaccctcgtcgtc 2354980
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E02
          Length = 154458

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    ctcgtcgtcagggcccagaccgag 210
              |||||||||||||||||| |||||
Sbjct: 120976 ctcgtcgtcagggcccaggccgag 120953
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>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0525F01
          Length = 151668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    ccgtccccgaccccgatccc 299
              ||||||||||||||||||||
Sbjct: 138915 ccgtccccgaccccgatccc 138896
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>emb|AJ414383.1|RSO414383 Ralstonia solanacearum partial mutS gene
          Length = 2088

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 375 ggagcgcatcaacggccggctggc 398
           ||||||||||| ||||||||||||
Sbjct: 963 ggagcgcatcaccggccggctggc 986
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>dbj|AK120621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152E17, full
           insert sequence
          Length = 1872

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 ccgtccccgaccccgatccc 299
           ||||||||||||||||||||
Sbjct: 51  ccgtccccgaccccgatccc 70
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>dbj|AK072084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A15, full
           insert sequence
          Length = 1872

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 ccgtccccgaccccgatccc 299
           ||||||||||||||||||||
Sbjct: 51  ccgtccccgaccccgatccc 70
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 375     ggagcgcatcaacggccggctggc 398
               ||||||||||| ||||||||||||
Sbjct: 1208776 ggagcgcatcaccggccggctggc 1208753
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>emb|Z54072.1|HSL261H12 Human DNA sequence from clone LA04NC01-261H12 on chromosome 4, complete
             sequence
          Length = 40198

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   cagggcccagaccgagcctg 214
             ||||||||||||||||||||
Sbjct: 26066 cagggcccagaccgagcctg 26085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,629,410
Number of Sequences: 3902068
Number of extensions: 3629410
Number of successful extensions: 74657
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73344
Number of HSP's gapped (non-prelim): 1312
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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