Clone Information

BLAST Search Result

Clone Name	bart19c02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precur...	83	6e-16
2	P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precurso...	76	6e-14
3	P4HA2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precur...	75	1e-13
4	P4HA2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precur...	74	3e-13
5	P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precur...	72	9e-13
6	P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1....	72	1e-12
7	P4HA2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precur...	72	1e-12
8	P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precur...	67	4e-11
9	P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precur...	65	2e-10
10	P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precur...	65	2e-10
11	P4H_MIMIV (Q5UP57) Putative prolyl 4-hydroxylase (EC 1.14.11.2) ...	55	2e-07
12	NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr...	35	0.12
13	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	35	0.12
14	EGLN1_MOUSE (Q91YE3) Egl nine homolog 1 (EC 1.14.11.-) (Hypoxia-...	34	0.26
15	SYV_AQUAE (O67411) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	34	0.34
16	CH60_ANASL (Q9AMJ8) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	33	0.58
17	CH602_PROMA (Q7TV93) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	33	0.58
18	CH601_SYNPX (Q7TTX1) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	33	0.76
19	CH601_ANASP (Q8YQZ8) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	33	0.76
20	ZN575_HUMAN (Q86XF7) Zinc finger protein 575	33	0.76
21	NEST_HUMAN (P48681) Nestin	33	0.76
22	NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 prec...	32	0.99
23	CH602_PROMP (Q7TU44) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	32	0.99
24	CH602_PROMM (Q7TUS4) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	32	1.3
25	CH60_SYNEL (Q8DMD4) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	32	1.3
26	EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC 1.1...	32	1.3
27	CH60_SYNP7 (P22879) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	32	1.7
28	CH601_SYNP6 (P12834) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	32	1.7
29	MEIS1_XENLA (P79937) Homeobox protein Meis1 (XMeis1)	31	2.2
30	CH60_AZOSE (Q5P7G2) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	31	2.2
31	GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4) (End...	31	2.2
32	EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC 1.1...	31	2.9
33	RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2	31	2.9
34	DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)	31	2.9
35	YM09_PARTE (P15610) Hypothetical 22.9 kDa protein (ORF9)	31	2.9
36	CH601_SYNY3 (Q05972) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	30	3.8
37	GOGA2_RAT (Q62839) Golgin subfamily A member 2 (Cis-Golgi matrix...	30	3.8
38	QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)	30	3.8
39	NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 pr...	30	3.8
40	FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related ...	30	3.8
41	IE68_PRVKA (P24827) Immediate-early protein RSP40	30	4.9
42	IBP1_PIG (Q75ZP3) Insulin-like growth factor-binding protein 1 p...	30	4.9
43	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	30	4.9
44	PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacema...	30	4.9
45	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	30	4.9
46	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	30	4.9
47	CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein ...	30	4.9
48	STATB_CAEEL (Q20977) Signal transducer and activator of transcri...	30	6.4
49	FA53B_MOUSE (Q8BGR5) Protein FAM53B	30	6.4
50	CH60_GUITH (O78419) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	30	6.4
51	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	30	6.4
52	FAT2_RAT (O88277) Protocadherin Fat 2 precursor (Multiple epider...	30	6.4
53	ICAM4_PANTR (Q5NKT8) Intercellular adhesion molecule 4 precursor...	29	8.4
54	CH60_BORPE (P48210) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	8.4
55	CH60_BORPA (Q7W134) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	8.4
56	CH60_BORBR (Q7WNS4) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	8.4
57	AROC2_BACHK (Q6HHF5) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	29	8.4
58	AROC2_BACCZ (Q63A04) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	29	8.4
59	AROC2_BACC1 (Q736A4) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	29	8.4
60	AROC2_BACAN (Q81P61) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	29	8.4
61	CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	8.4
62	RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-) ...	29	8.4
63	SPR2D_MOUSE (O70555) Small proline-rich protein 2D	29	8.4
64	ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (E...	29	8.4
65	CYP37_ARATH (P82869) Peptidyl-prolyl cis-trans isomerase CYP37, ...	29	8.4
66	ICAM4_HUMAN (Q14773) Intercellular adhesion molecule 4 precursor...	29	8.4
67	CH602_VIBPA (Q87JG6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	29	8.4

>P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 559

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
 Frame = +1

Query: 175 FDPSRVVQLSWHPRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSS 354
           + P +V    ++P A L K  +SD E   + ELAK KL ++ V D+ +GK V +  R S 
Sbjct: 316 YAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISK 375

Query: 355 GMFLEKSQDEVVAMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYF---HDKNNQ 525
             +L++ + +VV  + +RI   T L  E  E +QI +Y  G  Y+PH+D+      K+ +
Sbjct: 376 SAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFE 435

Query: 526 ALG-GHRIATVLMYLS 570
           +LG G+RIATVL Y+S
Sbjct: 436 SLGTGNRIATVLFYMS 451

to top

>P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ V D E+GK   ++ R S   +L   +D VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+       A   LG G+RIAT L
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWL 454

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 455 FYMSDV 460

to top

>P4HA2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 539

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
 Frame = +1

Query: 181 PSRVVQLSWHPRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGM 360
           P +V  L + P A L K  + D+E + + ELA  KL+++ V ++++G+   +  R S   
Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSA 374

Query: 361 FLEKSQDEVVAMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQAL--- 531
           +L+   D V+  +  RI  +T L     E +Q+ +Y  G  Y+PH+D+   +   A    
Sbjct: 375 WLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTL 434

Query: 532 -GGHRIATVLMYLS 570
             G+RIATVL Y+S
Sbjct: 435 NTGNRIATVLFYMS 448

to top

>P4HA2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 537

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           P    +   +SD E + + E+AK KL ++ V D ++G    +  R S   +LE+  D VV
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 397

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           A +  R+   T L  +  E +Q+ +Y  G +YEPH+D+    +  A   LG G+R+AT L
Sbjct: 398 ARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFL 457

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 458 NYMSDV 463

to top

>P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 534

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           P    +   +SD E + + +LAK KL ++ V D ++G    +  R S   +LE+  D VV
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 396

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQAL--GGHRIATVLMY 564
           A + +R+   T L  +  E +Q+ +Y  G +YEPH+D+     +  L   G+R+AT L Y
Sbjct: 397 AKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNY 456

Query: 565 LSNI 576
           +S++
Sbjct: 457 MSDV 460

to top

>P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1.14.11.2) (4-PH|
           alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 516

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SD E + + ELAK +L ++ V D E+GK   +  R S   +L   +  VV
Sbjct: 317 PRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVV 376

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+       A   LG G+RIAT L
Sbjct: 377 SRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWL 436

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 437 FYMSDV 442

to top

>P4HA2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 535

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           P    +   +SD E + + E+AK KL ++ V D ++G    +  R S   +LE+  D VV
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 395

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           A +  R+   T L  +  E +Q+ +Y  G +YEPH+D+  +        LG G+R+AT L
Sbjct: 396 ARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFL 455

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 456 NYMSDV 461

to top

>P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ +++  +G       R S   +L   +D VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+       A   LG G+RIAT L
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWL 454

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 455 FYMSDV 460

to top

>P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ +++  +G       R S   +L   ++ VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+       A   LG G+RIAT L
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWL 454

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 455 FYMSDV 460

to top

>P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ +++  +G       R S   +L   ++ VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA---LG-GHRIATVL 558
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+       A   LG G+RIAT L
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWL 454

Query: 559 MYLSNI 576
            Y+S++
Sbjct: 455 FYMSDV 460

to top

>P4H_MIMIV (Q5UP57) Putative prolyl 4-hydroxylase (EC 1.14.11.2) (4-PH)|
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase)
          Length = 242

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
 Frame = +1

Query: 214 RAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVA 393
           + F+    ++  +C  +++ A  KL  S V            +R S  M++ K+ + +V 
Sbjct: 59  KPFVLNNLINPTKCQEIMQFANGKLFDSQVLSG-----TDKNIRNSQQMWISKN-NPMVK 112

Query: 394 MIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQAL-----GGHRIATVL 558
            I E I     +P +N E +Q++ Y   + Y  H+D   D + Q       GG RI TVL
Sbjct: 113 PIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVL 172

Query: 559 MYLSN 573
           +YL+N
Sbjct: 173 IYLNN 177

to top

>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = -3

Query: 358  CQSWFALRSGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGT 218
            C+       G +F  HC PP     C   ARSC     P G PC  T
Sbjct: 1262 CRHSLGRGGGLTFTCHCVPPFWGLRCERVARSCRELQCPVGIPCQQT 1308

to top

>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -3

Query: 331  GRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGTP 215
            G +F  HC  P     C   ARSC     P G PC  TP
Sbjct: 1270 GLTFTCHCAQPFWGPRCERVARSCRELQCPVGVPCQQTP 1308

to top

>EGLN1_MOUSE (Q91YE3) Egl nine homolog 1 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2)
           (HIF-PH2) (HPH-2) (SM-20)
          Length = 400

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -1

Query: 240 EEPLVQERPGVPRELDDAGGVEGAATAGD-A*RGESSRSGEVKREDEEEGKSHGPARWSH 64
           E P  Q  P  PR     GG  GAA AG  A RG+S+ +  V   ++      GP     
Sbjct: 62  EAPRAQPAPAQPRVAPPPGGAPGAARAGGAARRGDSAAASRVPGPEDAAQARSGPGPAEP 121

Query: 63  GGEN 52
           G E+
Sbjct: 122 GSED 125

to top

>SYV_AQUAE (O67411) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 1165

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +1

Query: 223  LHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVAMIE 402
            +++ F SD  CD  IE  K+++ K    DNE  K+     RT++   L    ++ + ++ 
Sbjct: 913  IYEFFWSDY-CDWYIEFTKERIYKKAPEDNEEEKAKVENERTTALYTLHYVLEKALRILH 971

Query: 403  ERI-----AAWTFLPSENGESIQILHY 468
              +       W  LP+  GESI +  +
Sbjct: 972  PFMPYITEELWHKLPNAEGESISLAEF 998

to top

>CH60_ANASL (Q9AMJ8) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKSV +E+  + GM  +K
Sbjct: 153 NDDEVRQMIAEALDKVGKEAVISLEEGKSVTTELEVTEGMRFDK 196

to top

>CH602_PROMA (Q7TV93) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 545

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+++E+  + GM  +K
Sbjct: 153 NDEEVGQMIADAMDKVGKEGVISLEEGKSMETELEVTEGMRFDK 196

to top

>CH601_SYNPX (Q7TTX1) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+++E+  + GM  +K
Sbjct: 153 NDEEVGKMIADAMDKVGKEGVISLEEGKSMETELEVTEGMRFDK 196

to top

>CH601_ANASP (Q8YQZ8) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKSV +E+  + GM  +K
Sbjct: 153 NDDEVGQMIAEAMDKVGKEGVISLEEGKSVTTELEITEGMRFDK 196

to top

>ZN575_HUMAN (Q86XF7) Zinc finger protein 575|
          Length = 245

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTP 230
           P   PP   SQ+ P P  S G  PRPR  P
Sbjct: 28  PHQGPPQKPSQSAPGPTASAGSPPRPRRRP 57

to top

>NEST_HUMAN (P48681) Nestin|
          Length = 1618

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
 Frame = -1

Query: 216  PGVPRELDDAGG------VEGAATAGDA*RGESS------RSGEVKREDEEEGKSHGPAR 73
            PGVP E+ +  G      ++ AA   D   GES        SGE   ED+EEG+  G  R
Sbjct: 1377 PGVPGEVAEPLGQVPQLLLDPAAWDRD---GESDGFADEEESGEEGEEDQEEGREPGAGR 1433

Query: 72   WSHGGENG 49
            W  G   G
Sbjct: 1434 WGPGSSVG 1441

to top

>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = -3

Query: 358  CQSWFALRSGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGT 218
            C+       G +F  HC  P     C   ARSC     P G PC  T
Sbjct: 1263 CRPSLGRGGGLTFTCHCVQPFWGLRCERVARSCRELQCPVGIPCQQT 1309

to top

>CH602_PROMP (Q7TU44) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 544

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDEEVGEMIANAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

to top

>CH602_PROMM (Q7TUS4) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 544

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDEEVGQMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

to top

>CH60_SYNEL (Q8DMD4) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 545

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDEEVGRMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

to top

>EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC 1.14.11.-)|
           (Hypoxia-inducible factor prolyl 4-hydroxylase)
          Length = 503

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 199 LSWHPRAFLHKGFLSDAECDHMIELAKDK-LEKSMVADNESGKSVQSEVRTS 351
           LS  P  F   GFLSD EC  +I LA+ K L++S +   E  +   S ++ S
Sbjct: 139 LSLKPLLFEIPGFLSDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSAMQVS 190

to top

>CH60_SYNP7 (P22879) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDFEVGQMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

to top

>CH601_SYNP6 (P12834) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDFEVGQMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

to top

>MEIS1_XENLA (P79937) Homeobox protein Meis1 (XMeis1)|
          Length = 390

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = -1

Query: 243 REEPLVQERPGVPRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSH 64
           R  PL  ++P   R+ DDA  +    T G +  G +S SG+    ++ +G  +  A  S 
Sbjct: 203 RSAPLT-DQPSWSRDHDDAASIRSGGTPGPSSGGHTSHSGD-NSSEQGDGLDNSIASPST 260

Query: 63  GGENGRESEMK 31
           G ++  + E K
Sbjct: 261 GDDDDPDKEKK 271

to top

>CH60_AZOSE (Q5P7G2) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 550

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK---------SQDEVVA 393
           SDA+   +I  + DK+ K  V   E GKS+Q+E+    GM  ++         + D+ VA
Sbjct: 154 SDADIGEIIAKSMDKVGKEGVITVEDGKSLQNELDVVEGMQFDRGYLSPYFINNPDKQVA 213

Query: 394 MIE 402
           ++E
Sbjct: 214 ILE 216

to top

>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -3

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTPCA 224
           P+  P PS S + PSP+ S  RTP P  TP A
Sbjct: 405 PSSQPSPSVSPS-PSPSPSASRTPTPTPTPTA 435

to top

>EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC 1.14.11.-)|
           (Hypoxia-inducible factor prolyl 4-hydroxylase)
          Length = 502

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 199 LSWHPRAFLHKGFLSDAECDHMIELAKDK-LEKSMVADNESGKSVQSEVRTS 351
           LS  P  F   GFL+D EC  +I LA+ K L++S +   E  +   S ++ S
Sbjct: 138 LSLKPLLFEIPGFLTDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSTMQVS 189

to top

>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -1

Query: 225  QERPGVPRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSHGGENG 49
            QE PG   ++D A   E     G +  GE     E   E  E     G ARW+ GG+ G
Sbjct: 1214 QEGPG---DVDRAAQGERVKGVGASEGGEEEEEEEETEEVAEAAGGSGRARWARGGQAG 1269

to top

>DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)|
          Length = 772

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -3

Query: 358 CQSWFALRSGRS-FPTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
           CQ+    + G S +   CPP  T + C SP   C   P   G  C
Sbjct: 454 CQNGGTCQEGASGYMCTCPPGYTGRNCSSPVSRCQHNPCHNGATC 498

to top

>YM09_PARTE (P15610) Hypothetical 22.9 kDa protein (ORF9)|
          Length = 204

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 192 DAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHG 82
           D+   EG A++GD     S   G+   +DEEE  S G
Sbjct: 48  DSSDDEGGASSGDEGEASSDDEGDASSDDEEEASSDG 84

to top

>CH601_SYNY3 (Q05972) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 540

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ +  V   E GKS+ +E+  + GM  +K
Sbjct: 152 NDEEVGQMIANAMDKVGQEGVISLEEGKSMTTELEITEGMRFDK 195

to top

>GOGA2_RAT (Q62839) Golgin subfamily A member 2 (Cis-Golgi matrix protein|
           GM130)
          Length = 986

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +1

Query: 259 HMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVAMIEERI 411
           H+    + KLEK  V   + G SV  E   +  + +EK Q   + +++E++
Sbjct: 754 HLAAPVQSKLEKEAVVPRDMGDSVSEESNQALHVAMEKLQSRFLEVMQEKV 804

to top

>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)|
          Length = 387

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 189 AGGVEGAATAGDA*RGES-SRSGEVKREDEEEGKSHGPARWSHGGENGRESEMKPG 25
           AG +E A     A +GE+ + + E++ +++   +  G A     GE+G+E E K G
Sbjct: 84  AGALEAAKAEALAGKGEAGAAAAELEEKEKAAEEKKGAAEGGKDGESGKEGEKKNG 139

to top

>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            (hNotch4) [Contains: Notch 4 extracellular truncation;
            Notch 4 intracellular domain]
          Length = 2003

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = -3

Query: 334  SGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGTP 215
            SG S+  HCPP      C      C   P   G  C   P
Sbjct: 910  SGPSYFCHCPPGFQGSLCQDHVNPCESRPCQNGATCMAQP 949



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
 Frame = -3

Query: 313 HCPPPSTSQACPSPARSCGRTPR--PRGTPCAGT 218
           HCPP     AC      C + P   P+GT C  T
Sbjct: 181 HCPPGFEGHACERDVNECFQDPGPCPKGTSCHNT 214

to top

>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1)
          Length = 451

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 189 AGGVEGAATAGDA*RGES-SRSGEVKREDEEEGKSHGPARWSHGGENGRESEMKPG 25
           AG +E A     A +GE+ + + E++ +++   +  G A     GE+G+E E K G
Sbjct: 84  AGALEAAKAEALAGKGEAGAAAAELEEKEKAAEEKKGAAEGGKDGESGKEGEKKNG 139

to top

>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -1

Query: 207 PRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSHGGENGRESE 37
           P E    G   G+   GD   GE     E + EDE++G+         GGE+G + E
Sbjct: 280 PPEDGSDGEGSGSDDGGD---GEDEDEDEDEDEDEDDGEDEEDEEGEDGGEDGEDGE 333

to top

>IBP1_PIG (Q75ZP3) Insulin-like growth factor-binding protein 1 precursor|
           (IGFBP-1) (IBP-1) (IGF-binding protein 1)
          Length = 262

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = -3

Query: 334 SGRSFPTHCPPPSTSQA--CPSPARSCGRTPRPRGTPCAGT 218
           +G   P HC P S  +   CP    SC    RP G  C  T
Sbjct: 24  AGAPQPLHCAPCSAERLALCPPVPASCPEATRPAGCGCCPT 64

to top

>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -3

Query: 352 SWFALRS---GRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGT 218
           SW  ++S   GR  PT  P P        PAR   R P P G P AG+
Sbjct: 761 SWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAP-GPPPAGS 807

to top

>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein|
            Rigui) (hPER)
          Length = 1290

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
 Frame = -1

Query: 240  EEPLVQERPGVPRELDDAGGVEGAATAGDA*RGE----------SSRSGEVKREDEEEGK 91
            ++PL  E  G+  E  + GG E  ++ G +  GE          +S S ++  E+EEEG+
Sbjct: 1216 DDPLFSELDGLGLEPMEEGGGEQGSSGGGSGEGEGCEEAQGGAKASSSQDLAMEEEEEGR 1275

Query: 90   S 88
            S
Sbjct: 1276 S 1276

to top

>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -3

Query: 352 SWFALRS---GRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGT 218
           SW  ++S   GR  PT  P P        PAR   R P P G P AG+
Sbjct: 761 SWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAP-GPPPAGS 807

to top

>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -3

Query: 352 SWFALRS---GRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGT 218
           SW  ++S   GR  PT  P P        PAR   R P P G P AG+
Sbjct: 761 SWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAP-GPPPAGS 807

to top

>CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein cbiO 1|
          Length = 563

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
 Frame = -3

Query: 334 SGRSFPTHCPPPSTSQACPSPARSCGRTPRPRG----TPCAGTPW 212
           +GR  P H PPPS     P   R      R RG     P A TP+
Sbjct: 271 AGREIPDHTPPPSAPLPAPPAPRPVTSRWRRRGKRPENPSAPTPY 315

to top

>STATB_CAEEL (Q20977) Signal transducer and activator of transcription b (Zinc|
           finger protein STAT-B)
          Length = 966

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +1

Query: 217 AFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVAM 396
           AF+ K  LS AE     +   D L    +A NE    +Q  ++    + L   +DE   +
Sbjct: 165 AFVSKHNLS-AEAYQGFKECADSLLSGKIAQNEQLPFIQRTLQICENVILN-FEDEKQHL 222

Query: 397 IEERIAAWTFLPSENGESI---QILHYKNGEKYEPHYDYFHDKNNQALGG 537
           + + +  W     +   +    Q LHYK  +     ++YF +   Q L G
Sbjct: 223 MSDVLLVWAMKQQKLSIATLHTQQLHYKELDLINLQFEYFGELLQQTLSG 272

to top

>FA53B_MOUSE (Q8BGR5) Protein FAM53B|
          Length = 422

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -3

Query: 325 SFPTHCPPP--STSQACPSPARSCGRTPRPRGTPC 227
           SFP +CPP   ST  + P  AR      R R  PC
Sbjct: 238 SFPEYCPPSANSTPASTPELARRSSGLARSRSQPC 272

to top

>CH60_GUITH (O78419) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 529

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ +  V   E GKS  +E+  + GM  EK
Sbjct: 153 NDIETGKMIADAIDKVGREGVISLEEGKSTITELEMTEGMCFEK 196

to top

>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTP 230
           P   PPPS+    P P    GRTP P G P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 314

to top

>FAT2_RAT (O88277) Protocadherin Fat 2 precursor (Multiple epidermal growth|
            factor-like domains 1)
          Length = 4351

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 331  GRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGTP 215
            G  +   CPPP + + C     +C   P   G  C  +P
Sbjct: 3969 GSGYLCRCPPPFSGRNCELGRENCTSAPCQEGGTCVSSP 4007

to top

>ICAM4_PANTR (Q5NKT8) Intercellular adhesion molecule 4 precursor (ICAM-4)|
           (CD242 antigen) (Fragment)
          Length = 269

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 343 ALRSGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGTPW 212
           A++ G+S   +C     S +CP P  S  RTP  +G    G  W
Sbjct: 56  AVQPGKSVQLNC-----SNSCPQPQNSSLRTPLRQGKTLRGPGW 94

to top

>CH60_BORPE (P48210) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 547

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           SDA    +I  A DK+ K  V   E GKS+++E+    GM  ++
Sbjct: 154 SDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDR 197

to top

>CH60_BORPA (Q7W134) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 547

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           SDA    +I  A DK+ K  V   E GKS+++E+    GM  ++
Sbjct: 154 SDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDR 197

to top

>CH60_BORBR (Q7WNS4) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 547

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           SDA    +I  A DK+ K  V   E GKS+++E+    GM  ++
Sbjct: 154 SDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDR 197

to top

>AROC2_BACHK (Q6HHF5) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 249 RVREEPLVQERPGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

to top

>AROC2_BACCZ (Q63A04) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 249 RVREEPLVQERPGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

to top

>AROC2_BACC1 (Q736A4) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 249 RVREEPLVQERPGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

to top

>AROC2_BACAN (Q81P61) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 249 RVREEPLVQERPGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

to top

>CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 528

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +DAE   MI  A D++ +  V   E GKS  + +  + GM  EK
Sbjct: 153 NDAEVGKMIADAIDRVGREGVISLEEGKSTSTSLEITEGMQFEK 196

to top

>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)|
           (Pam/highwire/rpm-1 protein) (Regulator of presynaptic
           morphology protein 1) (Synapse defective protein 3)
          Length = 3766

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 283 CPSPARSCGRTPRPRGTPC 227
           C +   +CGR PRP+GT C
Sbjct: 689 CSARGVACGRVPRPKGTMC 707

to top

>SPR2D_MOUSE (O70555) Small proline-rich protein 2D|
          Length = 85

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
           P  CPPP   + CP P     + P P   PC
Sbjct: 33  PEPCPPPKCPEPCPPP-----KCPEPCPEPC 58

to top

>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein|
           0) (EP0)
          Length = 410

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 334 SGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGT 218
           S RS P+  P  S+S   PSP+ S   T  PRG P A +
Sbjct: 355 SARSSPSSSP--SSSMRRPSPSASAPETAAPRGGPPASS 391

to top

>CYP37_ARATH (P82869) Peptidyl-prolyl cis-trans isomerase CYP37, chloroplast|
           precursor (EC 5.2.1.8) (PPIase CYP37) (Rotamase CYP37)
           (Thylakoid lumen PPIase of 38 kDa) (p38) (TLP38)
          Length = 461

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 427 LPSENGESIQILHYKNGEKYEPHYDYF---HDKNNQALGG 537
           LP     ++ + H +N E+Y   Y +F   +DK N  LGG
Sbjct: 367 LPLSVYGAVAMAHSENSEEYSSPYQFFFYLYDKRNSGLGG 406

to top

>ICAM4_HUMAN (Q14773) Intercellular adhesion molecule 4 precursor (ICAM-4)|
           (Landsteiner-Wiener blood group glycoprotein) (LW blood
           group protein) (CD242 antigen)
          Length = 271

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 343 ALRSGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPCAGTPW 212
           A++ G+S   +C     S +CP P  S  RTP  +G    G  W
Sbjct: 58  AVQPGKSVQLNC-----SNSCPQPQNSSLRTPLRQGKTLRGPGW 96

to top

>CH602_VIBPA (Q87JG6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 532

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = -1

Query: 258 VALRVREEPLVQERPGVPRELDDAGGVEGAATAGDA*RGESSRSGE 121
           VALR  EEPL Q         D+A  V  A  AGDA  G ++ +GE
Sbjct: 442 VALRAMEEPLRQIATNAG---DEASVVANAVKAGDADYGYNAATGE 484


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,669,016
Number of Sequences: 219361
Number of extensions: 1349208
Number of successful extensions: 6560
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 5729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6488
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result