ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart18c10 |
|---|---|
| Clone Library Name | barley_pub |
>PSD32_ARATH (Q9LQR8) Probable 26S proteasome non-ATPase regulatory subunit 3b| (26S proteasome subunit S3-b) Length = 487 Score = 49.3 bits (116), Expect = 9e-06 Identities = 29/57 (50%), Positives = 37/57 (64%) Frame = +3 Query: 120 MTEDVQMGEPQXXXXXXXXXXXXXXSTLEYLKEIAAVIEAGWLSKEVRRISRAVRLT 290 MT+DV+M + Q STL+ LKEIAA+I+ G +KEVRRI+RAVRLT Sbjct: 1 MTQDVEMKDNQTPTQSVVSAPT---STLQNLKEIAALIDTGSYTKEVRRIARAVRLT 54
>PSD3_DAUCA (Q06364) Probable 26S proteasome non-ATPase regulatory subunit 3| (26S proteasome subunit S3) (Nuclear antigen 21D7) Length = 489 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/57 (49%), Positives = 37/57 (64%) Frame = +3 Query: 120 MTEDVQMGEPQXXXXXXXXXXXXXXSTLEYLKEIAAVIEAGWLSKEVRRISRAVRLT 290 MT+DV+M E STL++LKEIA++IE+G ++EVRRI RAVRLT Sbjct: 1 MTQDVEMKEVPAPAPSNSVTAATP-STLQHLKEIASLIESGAYAREVRRILRAVRLT 56
>PSD31_ARATH (Q9LNU4) Probable 26S proteasome non-ATPase regulatory subunit 3a| (26S proteasome subunit S3-a) Length = 488 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/57 (47%), Positives = 36/57 (63%) Frame = +3 Query: 120 MTEDVQMGEPQXXXXXXXXXXXXXXSTLEYLKEIAAVIEAGWLSKEVRRISRAVRLT 290 MT+DV+M + ST++ LKEIAA+I+ G +KEVRRI+RAVRLT Sbjct: 1 MTQDVEMKDNNTPSQSIISSST---STMQNLKEIAALIDTGSYTKEVRRIARAVRLT 54
>PSD3_TOBAC (P93768) Probable 26S proteasome non-ATPase regulatory subunit 3| (26S proteasome subunit S3) (Nuclear antigen 21D7) Length = 488 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/57 (47%), Positives = 34/57 (59%) Frame = +3 Query: 120 MTEDVQMGEPQXXXXXXXXXXXXXXSTLEYLKEIAAVIEAGWLSKEVRRISRAVRLT 290 MT+DV+M E S +LKEIA++IE G ++EVRRISRAVRLT Sbjct: 1 MTQDVEMKEQ--AAPPSNSLSSTAPSIFHHLKEIASLIETGAYAREVRRISRAVRLT 55
>Y1325_ZYMMO (Q5NMW1) UPF0042 protein ZMO1325| Length = 323 Score = 32.7 bits (73), Expect = 0.86 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = +3 Query: 294 LDDTTTMSTHERKARISEFYA---VIFPSLMQLEHGISDSDDRRQRAVCSERYMRRDEPE 464 L DTTT S+H ++ + + +A + P++ L G S R + R+++ E Sbjct: 156 LIDTTTTSSHSLQSELRQQFAPENSVAPNVSILSFGFSRGIPRNCDLLFDMRFLQNPYWE 215 Query: 465 DSKRPVSEIDAEIEE 509 ++ RP++ +D EI + Sbjct: 216 EALRPLTGLDPEIAD 230
>VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like protein 2 (Vgl-2)| (VITO1 protein) Length = 317 Score = 32.3 bits (72), Expect = 1.1 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 19/87 (21%) Frame = -3 Query: 527 HAHPALFFYLGIDLG------DRPLAVLRLVSPH---------VPLGAHRPL----PPVV 405 HAHP + LG LG RP AV + +PH +P + RP P Sbjct: 201 HAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAP 260 Query: 404 GVADPVLQLHEGGEYHGIEFADPGLPF 324 P +L GE G +A PG PF Sbjct: 261 APGSPPCELSGKGEPAGAAWAGPGGPF 287
>K0690_MOUSE (Q6P5B0) Protein Kiaa0690| Length = 1295 Score = 31.6 bits (70), Expect = 1.9 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Frame = +3 Query: 195 STLEYLKEIAAVIEA----GWLSKEVRRI-----SRAVRLTGLDDTTTMSTHERKARISE 347 + LE +K + EA +L K ++ S RL+ LD ++ + +A IS+ Sbjct: 713 AVLETIKTYLTITEAQLVNSFLEKATEKVLDPASSDFTRLSVLDLVVALAPYSDEAAISK 772 Query: 348 FYAVIFPSLMQLEHGISDSDDRRQRAVCS 434 Y+ I P L HG+ R VC+ Sbjct: 773 LYSTIRPYLESKVHGVQKKAYRVLEEVCA 801
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 31.2 bits (69), Expect = 2.5 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 513 CGMCME-LNSRVVLPNYSHDMCINFYRQWIGYST 611 CG+C E N V++P SH+ C R+++ Y T Sbjct: 25 CGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKT 58
>SDHD_PHOPR (Q6LHF5) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 443 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/66 (22%), Positives = 32/66 (48%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 ++++ A+ + W + + ++ + GLD T +R R + + A FP + + Sbjct: 16 VEKLIALDDVSWFNPNITTLAEGLPYVGLDKTDIKDASDRLKRFAPYLAKAFPETAK-TN 74 Query: 390 GISDSD 407 GI +SD Sbjct: 75 GIIESD 80
>SDHD_BACST (Q75TH5) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 459 Score = 31.2 bits (69), Expect = 2.5 Identities = 19/65 (29%), Positives = 29/65 (44%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 LK I A E W + + ++A+R L + ER R + + A FP + H Sbjct: 17 LKTIMAAEEVFWRNPKYHAFAQAIRTIPLRERDVKEAEERLRRFAPYIAKAFPE-TRTAH 75 Query: 390 GISDS 404 GI +S Sbjct: 76 GIIES 80
>SDHD_SALTI (Q8Z2L4) D-serine dehydratase (EC 4.3.1.18) (D-serine deaminase)| (DSD) Length = 440 Score = 30.8 bits (68), Expect = 3.3 Identities = 16/66 (24%), Positives = 32/66 (48%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 ++++ A+ E W + +++ + GL + + H+R AR + + A FP Sbjct: 14 VEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQ-TAAAG 72 Query: 390 GISDSD 407 GI +SD Sbjct: 73 GIIESD 78
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/62 (33%), Positives = 26/62 (41%) Frame = +1 Query: 325 KGRPGSANSMP*YSPPSCNWSTGSATPTTGGRGRCAPRGT*GETSRRTARGRSPRSMPR* 504 +G PGS ++ P N GSA G RG P G G ARG + PR Sbjct: 942 RGEPGSPGALGSSGQPGPNGPAGSAG-RPGNRGESGPTGNGGPVGAVGARGAPGPAGPRG 1000 Query: 505 KK 510 +K Sbjct: 1001 EK 1002
>SDHD_VIBCH (Q9KL72) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 441 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/66 (22%), Positives = 29/66 (43%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 +KE+ + E W + + R+ + GL +R R + + A FP + + Sbjct: 16 VKELIELKEVSWFNPSITRLEEGLSYVGLGSEDIQDASQRLKRFAPYLAKAFPETAK-TN 74 Query: 390 GISDSD 407 GI +S+ Sbjct: 75 GIIESE 80
>SDHD_BACHD (Q9KC12) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 442 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = +3 Query: 216 EIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEHGI 395 ++ A E WL+ + AVR L + +R R + + A +FP Q HG+ Sbjct: 15 KLMATEEVFWLNPHIDSFKSAVRKLSLHEDDVKDAEKRLDRFAPYIAKVFPGTNQ-AHGM 73 Query: 396 SDS 404 +S Sbjct: 74 IES 76
>TF2B_AERPE (Q9Y942) Transcription initiation factor IIB (TFIIB)| Length = 325 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/73 (20%), Positives = 32/73 (43%) Frame = +3 Query: 375 MQLEHGISDSDDRRQRAVCSERYMRRDEPEDSKRPVSEIDAEIEEECGMCMELNSRVVLP 554 M +E + D + + + + R P S RP++ +D ++ + E+ SR+ +P Sbjct: 81 MGVEASLEHPRDHGPKGIKQRKILPRRPPRLSARPLTSVDKNLQTALSLINEVASRMGMP 140 Query: 555 NYSHDMCINFYRQ 593 + YR+ Sbjct: 141 EIVVEDASKIYRE 153
>SDHD_SALTY (Q8ZL08) D-serine dehydratase (EC 4.3.1.18) (D-serine deaminase)| (DSD) Length = 440 Score = 30.0 bits (66), Expect = 5.6 Identities = 12/53 (22%), Positives = 27/53 (50%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFP 368 ++++ A+ E W + +++ + GL + + H+R AR + + A FP Sbjct: 14 VEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFP 66
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 30.0 bits (66), Expect = 5.6 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 513 CGMCME-LNSRVVLPNYSHDMCINFYRQWIGYST 611 CG+C E N +++P SH+ C R+++ Y T Sbjct: 25 CGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKT 58
>SDHD_BACHK (Q6HKG3) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 446 Score = 29.6 bits (65), Expect = 7.2 Identities = 15/65 (23%), Positives = 31/65 (47%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 L ++ A E W++ + + A++ + L + ER R + + A +FP + + Sbjct: 14 LNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASYIAKVFPETKETK- 72 Query: 390 GISDS 404 GI +S Sbjct: 73 GIIES 77
>SDHD_BACCZ (Q63D23) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 446 Score = 29.6 bits (65), Expect = 7.2 Identities = 15/65 (23%), Positives = 31/65 (47%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 L ++ A E W++ + + A++ + L + ER R + + A +FP + + Sbjct: 14 LNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASYIAKVFPETKETK- 72 Query: 390 GISDS 404 GI +S Sbjct: 73 GIIES 77
>SDHD_BACC1 (Q73AC5) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 443 Score = 29.6 bits (65), Expect = 7.2 Identities = 15/65 (23%), Positives = 32/65 (49%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 L ++ A E W++ + + A++ + L++ ER R + + A +FP + + Sbjct: 14 LNKLIATEEVFWVNPNMEKYETAIKDSPLNEENVKDAEERLKRFAPYIAKVFPETKE-TN 72 Query: 390 GISDS 404 GI +S Sbjct: 73 GIIES 77
>APTX_FUGRU (P61800) Aprataxin homolog (Forkhead-associated domain histidine| triad-like protein) (FHA-HIT) Length = 356 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 8/97 (8%) Frame = +3 Query: 279 VRLTGLDDTTTMSTHERKARIS------EFYAV--IFPSLMQLEHGISDSDDRRQRAVCS 434 V+ GL+ T+ S K +S + Y V ++P +Q + +S S R + AV Sbjct: 57 VKQLGLNPTSIDSLVVGKGSVSKMKPGQQLYIVNQLYPYTVQFKEDLSGSTKRSREAVSE 116 Query: 435 ERYMRRDEPEDSKRPVSEIDAEIEEECGMCMELNSRV 545 R+ ++EP E+ + ++ M + S V Sbjct: 117 TRHNDKEEPCRKSSKQGEVSVSVSQKEAPKMSVRSNV 153
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 29.6 bits (65), Expect = 7.2 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +3 Query: 33 PVHHRSFPPLAPAPKTSTPTILHTPP 110 P HH PP+ P P I+H PP Sbjct: 95 PSHHGPKPPIVKPPHVPRPPIVHPPP 120
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 29.6 bits (65), Expect = 7.2 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 L E I+ LS+E R+I ++V+ G + + + + YA + L++L Sbjct: 652 LPERKVFIQHITLSEEERKIYQSVKNEG---KAAIGRYFTEGTVLAHYADVLGLLLRLRQ 708 Query: 390 GISDSDDRRQRAVCSERYMRRDEPEDSKRPVSE-----IDAEIEEECGMCMELNSRVVLP 554 I + S R D PE+ ++ + E + + +EEC +C++ + V+ Sbjct: 709 -ICCHTHLLTNGMSSSGPSRSDTPEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVIT 767 Query: 555 NYSHDMC 575 + +H C Sbjct: 768 HCAHVFC 774
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 29.3 bits (64), Expect = 9.5 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 5/127 (3%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 L E I+ LS E R+I ++V+ G T+ + + + YA + L++L Sbjct: 655 LPERPVFIQHITLSDEERKIYQSVKSEG---KATIGRYFNEGTVLAHYADVLGLLLRLRQ 711 Query: 390 GISDSDDRRQRAVCSERYMRRDEPEDSKRPVSE-----IDAEIEEECGMCMELNSRVVLP 554 I V S D PE+ ++ + + + + +EEC +C++ + V+ Sbjct: 712 -ICCHTHLLTNTVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVIT 770 Query: 555 NYSHDMC 575 + +H C Sbjct: 771 HCAHVFC 777
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 6/58 (10%) Frame = -2 Query: 612 SCCTQSIDGRS*CTCRGC------SWAARPCC*APCXXXXXXXXXXXXXRPASCCPPA 457 SCC QS + CT C S RP C C ASCC PA Sbjct: 198 SCCQQSSCQPACCTTSCCRPSSSVSLLCRPICRPACCVPISSCCAPASSYQASCCRPA 255
>K0690_CHICK (Q5ZKD5) Protein KIAA0690 homolog| Length = 1294 Score = 29.3 bits (64), Expect = 9.5 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 5/81 (6%) Frame = +3 Query: 207 YLKEIAAVIEAGWLSKEVRRI-----SRAVRLTGLDDTTTMSTHERKARISEFYAVIFPS 371 YL + G+L K ++ S RL+ LD MS + + + Y I PS Sbjct: 723 YLTITDPQLGCGFLQKASEKLTSPESSEFARLSILDLVVAMSPYANEQALGSLYRTIQPS 782 Query: 372 LMQLEHGISDSDDRRQRAVCS 434 L +H + R VC+ Sbjct: 783 LQSKDHSMQKKAYRVLEEVCA 803
>4ET_MOUSE (Q9EST3) Eukaryotic translation initiation factor 4E transporter| (eIF4E transporter) (4E-T) (Eukaryotic translation initiation factor 4E nuclear import factor 1) Length = 983 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/59 (23%), Positives = 25/59 (42%) Frame = +3 Query: 234 EAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEHGISDSDD 410 E W S S + LTG DD H+ + R A + +++ G+++ D+ Sbjct: 217 EPEWFSAGPTSQSETIELTGFDDKILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDE 275
>Y2595_SULSO (Q97VM6) UPF0310 protein SSO2595| Length = 149 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 450 RDEPEDSKRPVSEIDAEIEEEC 515 R+ P + KRP+ E DA+I EEC Sbjct: 120 RNAPANLKRPIPESDAKIVEEC 141
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 29.3 bits (64), Expect = 9.5 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 5/127 (3%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEH 389 L E I+ LS E R+I ++V+ G T+ + + + YA + L++L Sbjct: 658 LPERKVFIQHITLSDEERKIYQSVKNEG---RATIGRYFNEGTVLAHYADVLGLLLRLRQ 714 Query: 390 GISDSDDRRQRAVCSERYMRRDEPEDSKRPVSE-----IDAEIEEECGMCMELNSRVVLP 554 I AV S D PE+ ++ + + + +EEC +C++ + V+ Sbjct: 715 -ICCHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVIT 773 Query: 555 NYSHDMC 575 + +H C Sbjct: 774 HCAHVFC 780
>SDHD_ECOLI (P00926) D-serine dehydratase (EC 4.3.1.18) (D-serine deaminase)| (DSD) Length = 442 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFP 368 +K++ A+ E W + ++ + GL + H R +R + + A FP Sbjct: 16 VKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFP 68
>SDHD_ECO57 (Q8XCK5) D-serine dehydratase (EC 4.3.1.18) (D-serine deaminase)| (DSD) Length = 442 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +3 Query: 210 LKEIAAVIEAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFP 368 +K++ A+ E W + ++ + GL + H R +R + + A FP Sbjct: 16 VKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFP 68
>4ET_HUMAN (Q9NRA8) Eukaryotic translation initiation factor 4E transporter| (eIF4E transporter) (4E-T) (Eukaryotic translation initiation factor 4E nuclear import factor 1) Length = 985 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/59 (23%), Positives = 25/59 (42%) Frame = +3 Query: 234 EAGWLSKEVRRISRAVRLTGLDDTTTMSTHERKARISEFYAVIFPSLMQLEHGISDSDD 410 E W S S + LTG DD H+ + R A + +++ G+++ D+ Sbjct: 218 EPEWFSAGPTSQSETIELTGFDDKILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDE 276 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,700,394 Number of Sequences: 219361 Number of extensions: 1449361 Number of successful extensions: 6671 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 6274 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6657 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
