ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17e04 |
|---|---|
| Clone Library Name | barley_pub |
>YGGC_ECOLI (P11664) Hypothetical protein yggC| Length = 237 Score = 44.7 bits (104), Expect = 2e-04 Identities = 32/93 (34%), Positives = 47/93 (50%) Frame = +1 Query: 289 QIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWS 468 Q + + +E V+ L H+L+AL+++ N + +V L PPG GKST+ + W Sbjct: 15 QYQNEEIENVHKPLL-HMLAALQTV-NPQRRTVVFLCAPPGTGKSTLTTF--------WE 64 Query: 469 QKHAKDGSPNSDEDIATMLPMDGFHLYRSQLDA 567 +D + LPMDGFH Y S LDA Sbjct: 65 YLAQQD----PELPAIQTLPMDGFHHYNSWLDA 93
>Y249_PYRAB (Q9V225) Hypothetical protein PYRAB02490| Length = 324 Score = 37.4 bits (85), Expect = 0.032 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNK 459 YIVG+ GPPGAGKST+ ++++ K Sbjct: 46 YIVGITGPPGAGKSTLLDKLIKEARK 71
>URK1_YEAST (P27515) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| Length = 501 Score = 35.0 bits (79), Expect = 0.16 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDG--SPNSDEDIA 516 YI+G+ G G+GK++VA+++V +N W+ + D +P ED A Sbjct: 57 YIIGIGGASGSGKTSVAAKIVSSINVPWTVLISLDNFYNPLGPEDRA 103
>BMS1_YEAST (Q08965) Ribosome biogenesis protein BMS1| Length = 1183 Score = 34.3 bits (77), Expect = 0.27 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Frame = +1 Query: 238 TWKKK-----HNVTCYQRQGAPQIEAKSMEEVYDALAE--HLLSALKSIDNLDSKYIVGL 396 T KKK HN + AP A++M+ D H+ ++ ++ +IV + Sbjct: 16 TAKKKLHTQGHNAKAFA-VAAPGKMARTMQRSSDVNERKLHVPMVDRTPEDDPPPFIVAV 74 Query: 397 AGPPGAGKSTVASEVVRRVNK 459 GPPG GK+T+ +VRR+ K Sbjct: 75 VGPPGTGKTTLIRSLVRRMTK 95
>Y274_PYRHO (O58012) Hypothetical protein PH0274| Length = 317 Score = 34.3 bits (77), Expect = 0.27 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNK 459 +IVG+ GPPGAGKST+ ++++ + Sbjct: 48 HIVGITGPPGAGKSTLLDKLIKEARR 73
>BMS1_SCHPO (O94653) Ribosome biogenesis protein BMS1 homolog| Length = 1121 Score = 33.9 bits (76), Expect = 0.36 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +1 Query: 337 HLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNK 459 H+ ++ D IV + GPPG GKST+ +VRR +K Sbjct: 60 HVPMVDRTPDEAPPPVIVAVMGPPGTGKSTLIKSLVRRYSK 100
>LONM_YEAST (P36775) Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) Length = 1133 Score = 33.5 bits (75), Expect = 0.47 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = +1 Query: 250 KHNVTCYQRQGAPQI---EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGK 420 KH+ Y A +I + M +V D + E ++ K + +D K I+ GPPG GK Sbjct: 581 KHSKEQYSIPRAKKILDEDHYGMVDVKDRILE-FIAVGKLLGKVDGK-IICFVGPPGVGK 638 Query: 421 STVASEVVRRVNKRW 465 +++ + R +N+++ Sbjct: 639 TSIGKSIARALNRKF 653
>LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)| Length = 795 Score = 33.1 bits (74), Expect = 0.61 Identities = 16/53 (30%), Positives = 32/53 (60%) Frame = +1 Query: 307 MEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 +++V + + E+L L++ N I+ L GPPG GKS++A + ++K++ Sbjct: 350 LDKVKERIVEYLAVQLRTQKNKGP--IMCLVGPPGVGKSSLAKSIAEALDKKF 400
>YFH7_YEAST (P43591) Hypothetical 39.9 kDa protein in MPR1-GCN20 intergenic| region Length = 353 Score = 33.1 bits (74), Expect = 0.61 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +1 Query: 508 DIATMLPMDGFHLYRSQLDAMEDP 579 +IA ++PMDGFHL R LD +DP Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDP 177 Score = 32.7 bits (73), Expect = 0.80 Identities = 16/46 (34%), Positives = 29/46 (63%) Frame = +1 Query: 328 LAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 LA+ +L L + + + V L G PG+GKST+A E+ + +N+++ Sbjct: 7 LADDVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQIINEKY 52
>LON_BUCAI (P57549) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 32.7 bits (73), Expect = 0.80 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = +1 Query: 292 IEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 I+ +E V D + E+L A++S N I+ L GPPG GK+++ + R +++ Sbjct: 322 IDHFGLETVKDRILEYL--AVQSRKNKIKGPILCLIGPPGVGKTSLGKSIARSTGRKY 377
>LON_TREPA (O83536) ATP-dependent protease La (EC 3.4.21.53)| Length = 881 Score = 32.7 bits (73), Expect = 0.80 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +1 Query: 307 MEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNK 459 +E V + + E+L D S I+ L GPPG GK++V + R ++K Sbjct: 411 LENVKERIVEYLAVRKLRADTKGS--IILLVGPPGVGKTSVGKSIARAIHK 459
>AROK_COREF (Q8FT30) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 169 Score = 32.7 bits (73), Expect = 0.80 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVN 456 IV L GPPGAGKST+ + R +N Sbjct: 5 IVVLVGPPGAGKSTIGRRLARALN 28
>LONM_HUMAN (P36776) Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) (Lon protease-like protein) (LONP) (LONHs) Length = 959 Score = 32.7 bits (73), Expect = 0.80 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = +1 Query: 226 VTRATWKK--KHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLA 399 +T W K N+ + Q + + ME+V + E + A+ + I+ Sbjct: 465 LTSIPWGKYSNENLDLARAQAVLEEDHYGMEDVKKRILEFI--AVSQLRGSTQGKILCFY 522 Query: 400 GPPGAGKSTVASEVVRRVNKRW 465 GPPG GK+++A + R +N+ + Sbjct: 523 GPPGVGKTSIARSIARALNREY 544
>RFCL_SULTO (Q975D4) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 440 Score = 32.3 bits (72), Expect = 1.0 Identities = 25/76 (32%), Positives = 36/76 (47%) Frame = +1 Query: 295 EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQK 474 E ++ E+ L E + S LK N + V L GPPG GK+T+A + R + Sbjct: 16 EVENEEDAKKELVEWIESWLKGKPNYKA---VLLYGPPGVGKTTLAEALARDYKLELFEM 72 Query: 475 HAKDGSPNSDEDIATM 522 +A D + DI TM Sbjct: 73 NASDS--RNLNDIRTM 86
>MYG1_MOUSE (Q9JK81) MYG1 protein (Gamm1 protein)| Length = 380 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/80 (26%), Positives = 36/80 (45%) Frame = +1 Query: 295 EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQK 474 E ++ +YD + E+ + + ++DN S++ G P +T S V R+N W+Q Sbjct: 152 EDSVVDTIYDKMYENFVEEVDAVDNGISQWA---EGEPRYAMTTTLSARVARLNPTWNQ- 207 Query: 475 HAKDGSPNSDEDIATMLPMD 534 PN D + MD Sbjct: 208 ------PNQDTEAGFRRAMD 221
>LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 774 Score = 32.3 bits (72), Expect = 1.0 Identities = 16/57 (28%), Positives = 34/57 (59%) Frame = +1 Query: 295 EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 E +E+V + + E+L A++ + I+ LAGPPG GK+++A + + + +++ Sbjct: 321 EHHGLEKVKERILEYL--AVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKF 375
>LON_ECOLI (P0A9M0) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAK--SMEEVYDALAEHLLSALKSIDNLDSKYIVGLA 399 + + W + V RQ ++ +E V D + E+L A++S N I+ L Sbjct: 298 MVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYL--AVQSRVNKIKGPILCLV 355 Query: 400 GPPGAGKSTVASEVVRRVNKRW 465 GPPG GK+++ + + +++ Sbjct: 356 GPPGVGKTSLGQSIAKATGRKY 377
>LON_ECOL6 (P0A9M1) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAK--SMEEVYDALAEHLLSALKSIDNLDSKYIVGLA 399 + + W + V RQ ++ +E V D + E+L A++S N I+ L Sbjct: 298 MVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYL--AVQSRVNKIKGPILCLV 355 Query: 400 GPPGAGKSTVASEVVRRVNKRW 465 GPPG GK+++ + + +++ Sbjct: 356 GPPGVGKTSLGQSIAKATGRKY 377
>LON_BUCBP (Q89A99) ATP-dependent protease La (EC 3.4.21.53)| Length = 780 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/74 (28%), Positives = 39/74 (52%) Frame = +1 Query: 244 KKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKS 423 K K N+T Q Q + +++V + + E+L A++S N I+ L GPPG GK+ Sbjct: 308 KVKKNLT--QAQKILDSDHFGLDKVKERILEYL--AVQSRINTVKGPILCLVGPPGVGKT 363 Query: 424 TVASEVVRRVNKRW 465 ++ + R +++ Sbjct: 364 SLGQSIARATGRKY 377
>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding| protein 19) Length = 1895 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/48 (37%), Positives = 31/48 (64%) Frame = +1 Query: 322 DALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 D E +LS L I++LD + I G+ G G GK+T+A E+ R+++ ++ Sbjct: 820 DMQVEEILSLL-CIESLDVRSI-GIWGTVGIGKTTIAEEIFRKISVQY 865
>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog| Length = 351 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = +1 Query: 295 EAKSMEEVYDALAEHLLSALKSID-----NLDSKYIVGLAGPPGAGKSTVASEVVRR 450 E K+ E+VY L EH+ S L ++ + + +++ + G G GK+T S++ ++ Sbjct: 116 ELKNPEKVYFLLKEHMYSILNRVEKPLKISNHTPFVILVVGINGTGKTTTVSKLAKK 172
>URK_CLOTE (Q896E3) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 209 Score = 31.6 bits (70), Expect = 1.8 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNK 459 ++G+ G G+GKSTV+ E+ RR +K Sbjct: 7 LIGITGGTGSGKSTVSKEICRRFDK 31
>RFCS_METKA (Q8TZC4) Replication factor C small subunit (RFC small subunit)| (Clamp loader small subunit) [Contains: Mkn RFC intein] Length = 635 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/68 (26%), Positives = 33/68 (48%) Frame = +1 Query: 250 KHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTV 429 +H + + + K ++++ D EH++ LK+ N + AGPPG GK+T Sbjct: 3 EHELRVLEIPWVEKYRPKRLDDIVDQ--EHVVERLKAYVNRGDMPNLLFAGPPGTGKTTA 60 Query: 430 ASEVVRRV 453 A + R + Sbjct: 61 ALCLAREL 68
>PSTB2_STRP8 (Q8P0V3) Phosphate import ATP-binding protein pstB 2 (EC 3.6.3.27)| (Phosphate-transporting ATPase 2) (ABC phosphate transporter 2) Length = 267 Score = 31.6 bits (70), Expect = 1.8 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKY-IVGLAG 402 +T W ++H +T + A + K + Y A A+K ID KY I L G Sbjct: 1 MTEYNWNERHIITFPEETLA--LATKDLHVYYGAK-----EAIKGIDMQFEKYKITALIG 53 Query: 403 PPGAGKST 426 P G GKST Sbjct: 54 PSGCGKST 61
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 13/79 (16%) Frame = +1 Query: 286 PQIEAKSMEE--VYDA-LAEHLLSALKSIDNLDSKYI----------VGLAGPPGAGKST 426 P +E S+ E +YD+ L ++S + ++ L K++ + L GPPG GK++ Sbjct: 128 PCVEFDSIWENLIYDSNLKNEVMSYVAALARLSEKHVNTKIINVNRLILLTGPPGTGKTS 187 Query: 427 VASEVVRRVNKRWSQKHAK 483 + + + ++ R + K++K Sbjct: 188 LCKGLAQHLSIRMNDKYSK 206
>RFCL_SULAC (Q4JAB1) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 437 Score = 31.6 bits (70), Expect = 1.8 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Frame = +1 Query: 301 KSMEEV--YDALAEHLLSALKS-IDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQ 471 KS++EV D + E L ++S ++ + V L GPPG GK+T+A + R + Sbjct: 12 KSLQEVENQDEVKEELKKWIESWLNGEPTAKAVLLYGPPGVGKTTLAEALARDYKLELLE 71 Query: 472 KHAKDGSPNSD-EDIATMLPMDG 537 +A D D +D+A + G Sbjct: 72 MNASDSRNLRDIKDVAERASISG 94
>KTHY_LACJO (Q74KZ7) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 213 Score = 31.6 bits (70), Expect = 1.8 Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNKRWSQK---HAKDGSPNSDEDIATML 525 Y++ GP GAGK+TV +E+++++ + ++ + G E+I T++ Sbjct: 4 YLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTII 54
>COAA_BACHD (Q9K8X7) Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid| kinase) Length = 316 Score = 31.6 bits (70), Expect = 1.8 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +1 Query: 376 SKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 S +I+GLAG GKST A +++++ K W + H D Sbjct: 87 SPFIIGLAGSVAVGKSTTA-RLLQKLLKAWPEHHHVD 122
>URK_HALSA (Q9HQC9) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 225 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFH 543 + +G+AG GAGK+TVA E+ V + AT++P+D ++ Sbjct: 6 FAIGIAGGTGAGKTTVAREITDNVG-----------------ESATLIPLDNYY 42
>RUVB_BIFLO (Q8G6B7) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 354 Score = 31.2 bits (69), Expect = 2.3 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 7/57 (12%) Frame = +1 Query: 394 LAGPPGAGKSTVAS------EVVRRVNKRWSQKHAKD-GSPNSDEDIATMLPMDGFH 543 LAGPPG GK+T+A EV RV + +HA D S S D+ +L +D H Sbjct: 74 LAGPPGLGKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDVGEVLFIDEIH 130
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = +1 Query: 190 LSVSFQPAFHQPVTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDN 369 + + P VT T ++K +VT Y G + + + M EV + H +K Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVT-YNDVGGCKEQIEKMREVVELPMLHPEKFVKL--G 198 Query: 370 LDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 +D V GPPG GK+ +A V R + Sbjct: 199 IDPPKGVLCYGPPGTGKTLLARAVANRTD 227
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = +1 Query: 190 LSVSFQPAFHQPVTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDN 369 + + P VT T ++K +VT Y G + + + M EV + H +K Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVT-YNDVGGCKEQIEKMREVVELPMLHPEKFVKL--G 198 Query: 370 LDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 +D V GPPG GK+ +A V R + Sbjct: 199 IDPPKGVLCYGPPGTGKTLLARAVANRTD 227
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = +1 Query: 190 LSVSFQPAFHQPVTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDN 369 + + P VT T ++K +VT Y G + + + M EV + H +K Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVT-YNDVGGCKEQIEKMREVVELPMLHPEKFVKL--G 198 Query: 370 LDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 +D V GPPG GK+ +A V R + Sbjct: 199 IDPPKGVLCYGPPGTGKTLLARAVANRTD 227
>LON_CAMJE (O69300) ATP-dependent protease La (EC 3.4.21.53)| Length = 791 Score = 31.2 bits (69), Expect = 2.3 Identities = 19/53 (35%), Positives = 30/53 (56%) Frame = +1 Query: 301 KSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNK 459 K E Y A+ E LL K + +K I+ L GPPG GK+++A+ V + + + Sbjct: 332 KERIEEYFAVRE-LLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKR 383
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = +1 Query: 190 LSVSFQPAFHQPVTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDN 369 + + P VT T ++K +VT Y G + + + M EV + H +K Sbjct: 141 IQIPLPPKIDPSVTMMTVEEKPDVT-YNDVGGCKEQIEKMREVVELPMLHPEKFVKL--G 197 Query: 370 LDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 +D V GPPG GK+ +A V R + Sbjct: 198 IDPPKGVLCYGPPGTGKTLLARAVANRTD 226
>LONH2_ARATH (P93655) Lon protease homolog 2, mitochondrial precursor (EC| 3.4.21.-) Length = 940 Score = 31.2 bits (69), Expect = 2.3 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW 465 I+ L+GPPG GK+++ + R +N+++ Sbjct: 459 IICLSGPPGVGKTSIGRSIARALNRKF 485
>URK_UREPA (Q9PQF9) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 207 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/69 (24%), Positives = 34/69 (49%) Frame = +1 Query: 367 NLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHL 546 N S ++ +AG G+GK+T A+E++ R+ K + + ++ D +++ Sbjct: 2 NTKSPILILIAGASGSGKTTFANEIIARIPKNTT---------------SVVICQDSYYI 46 Query: 547 YRSQLDAME 573 SQL+ E Sbjct: 47 SNSQLNKKE 55
>LON_BUCAP (Q8K988) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/58 (27%), Positives = 33/58 (56%) Frame = +1 Query: 292 IEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 I+ +E+V + + E+L A++S N I+ L GPPG GK+++ + + +++ Sbjct: 322 IDHFGLEKVKERILEYL--AVQSRTNKVKGPILCLIGPPGVGKTSLGKSIAKSTGRKY 377
>EVPL_HUMAN (Q92817) Envoplakin (210 kDa paraneoplastic pemphigus antigen)| (p210) (210 kDa cornified envelope precursor protein) Length = 2033 Score = 30.8 bits (68), Expect = 3.0 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +1 Query: 217 HQPVTRATWKKKHNVTCYQRQGAPQIEA-KSMEEVYDALAEHLLSALKSIDNLDSKYIVG 393 HQ + W+ N+ Q +E + +E D++++ L K NLD+KY Sbjct: 307 HQEALKMEWQNFLNLCICQETQLQHVEDYRRFQEEADSVSQTLA---KLNSNLDAKYSPA 363 Query: 394 LAGPPGA 414 GPPGA Sbjct: 364 PGGPPGA 370
>URK_CLOPE (Q8XJI6) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 208 Score = 30.8 bits (68), Expect = 3.0 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = +1 Query: 388 VGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLDA 567 +G+ G G+GKST+A E+ R+ ED M+ D ++ +S L + Sbjct: 7 IGITGGTGSGKSTIAKEIYRQFG----------------EDCIAMIEQDSYYKDQSHL-S 49 Query: 568 MED 576 MED Sbjct: 50 MED 52
>Y796_METJA (Q58206) ABC transporter ATP-binding protein MJ0796| Length = 235 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +1 Query: 292 IEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 I+ K++ + Y + E ++ ALK+++ N+ V + GP G+GKST+ Sbjct: 2 IKLKNVTKTYK-MGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTM 47
>MTG2_YEAST (P38860) Mitochondrial GTPase 2| Length = 499 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +1 Query: 322 DALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEV 441 + L +H L LKSI +L GL G P AGKST+ +++ Sbjct: 326 NGLEQHFLFELKSIADL------GLIGLPNAGKSTILNKI 359
>LONH2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precursor (EC| 3.4.21.-) Length = 964 Score = 30.8 bits (68), Expect = 3.0 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW 465 I+ L+GPPG GK+++ + R +N+++ Sbjct: 450 IICLSGPPGVGKTSIGRSIARALNRQF 476
>RUVB_LACSS (Q38YQ9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Frame = +1 Query: 286 PQIEAK--SMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRV 453 PQ+ A+ + V + LA ++ +A K ++LD V L GPPG GK+T+A + + Sbjct: 25 PQVLAQYIGQDRVKNELAVYIEAAKKREESLDH---VLLYGPPGLGKTTLAMVIANEL 79
>KTHY_LACAC (Q5FM02) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 216 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRV 453 Y V GP GAGKSTV EV+ + Sbjct: 4 YFVSFEGPDGAGKSTVLKEVLAEI 27
>ORC1_YEAST (P54784) Origin recognition complex subunit 1 (Origin recognition| complex protein 120 kDa subunit) Length = 914 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +1 Query: 343 LSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 LSA +I++ DS + +AG PG GK+ EVV+ + +Q+ D Sbjct: 461 LSAYSAIES-DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507
>RFC1_MOUSE (P35601) Activator 1 140 kDa subunit (Replication factor C large| subunit) (A1 140 kDa subunit) (RF-C 140 kDa subunit) (Activator 1 large subunit) (A1-P145) (Differentiation-specific element-binding protein) (ISRE-binding protein) Length = 1131 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 352 LKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 L S D+ S L+GPPG GK+T AS V + + + + +A D Sbjct: 619 LASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASD 663
>RUVB_METHJ (Q2FPZ8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 337 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/49 (34%), Positives = 27/49 (55%) Frame = +1 Query: 310 EEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 + + DAL + SA K LD + +GPPG GK+T+A + + +N Sbjct: 32 DSIKDALTVAITSARKRNKPLDH---ILFSGPPGLGKTTLAHIIAQEMN 77
>CBIO4_CLOPE (Q8XK20) Putative cobalt import ATP-binding protein cbiO 4| Length = 568 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +1 Query: 238 TWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAG 417 TW K N +R+ +E K++ YD + L I+ D IV + G GAG Sbjct: 285 TWYKSLNFNKKEREEDTLLEFKNVSFSYDKKKDILSDINFKINRGD---IVSVVGKNGAG 341 Query: 418 KSTVA 432 KST++ Sbjct: 342 KSTIS 346 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Frame = +1 Query: 292 IEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVG----LAGPPGAGKSTVAS 435 +E K++ E D A + + + +++N++ G +AGP G+GKST+A+ Sbjct: 1 MERKAIIEFKDFTAHYTVQSKPTLNNINLTIYEGEKVLIAGPSGSGKSTLAN 52
>RECA_STAAW (P68846) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>RECA_STAAU (P68845) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>RECA_STAAS (Q6G9S8) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>RECA_STAAR (Q6GHF0) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>RECA_STAAN (P68844) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>RECA_STAAM (P68843) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>RECA_STAAC (Q5HGE6) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V D D + A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPD 119
>PSTB_XANAC (Q8PM59) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 267 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query: 253 HNVTCYQRQGAP------QIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPG 411 H + GAP ++ A++++ YD ALKSI+ + K + L GP G Sbjct: 2 HRIAVPAATGAPTAQAPVKVAARNLDFYYDKY-----HALKSINIEIPEKRVTALIGPSG 56 Query: 412 AGKSTV 429 GKST+ Sbjct: 57 CGKSTL 62
>PSTB2_STRMU (Q8DU23) Phosphate import ATP-binding protein pstB 2 (EC 3.6.3.27)| (Phosphate-transporting ATPase 2) (ABC phosphate transporter 2) Length = 267 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAG 402 +T W ++H +T + +I A S ++++ E A+K ID K I L G Sbjct: 1 MTEYNWNERHIITFPE-----EILALSTKDLHVYYGEK--EAIKGIDMQFKKKKITALIG 53 Query: 403 PPGAGKST 426 P G GKST Sbjct: 54 PSGCGKST 61
>RECA_STAHJ (Q4L5Y8) Protein recA (Recombinase A)| Length = 348 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V K D D A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPD 119
>LON_MYCPN (P78025) ATP-dependent protease La (EC 3.4.21.53)| Length = 795 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNK 459 I+ L GPPG GKS++A + +NK Sbjct: 374 IMCLVGPPGVGKSSLAKSIAEALNK 398
>URK_YERPE (Q8ZFZ9) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+G+AG +GKS +AS + R + ++ +H ++P DG++ +S L Sbjct: 10 IIGIAGASASGKSLIASTLYRELREQVGDQH------------IGVIPEDGYYKDQSHLS 57 Query: 565 AME 573 E Sbjct: 58 MEE 60
>RECA_STAES (Q8CPF4) Protein recA (Recombinase A)| Length = 349 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V K D D A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPD 119
>RECA_STAEQ (Q5HPQ6) Protein recA (Recombinase A)| Length = 349 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA + V K D D A L +D +LY SQ D Sbjct: 60 IIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPD 119
>URK_BACHD (Q9KDD8) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 211 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKR 462 I+G+AG G+GK+TVA E+ + N++ Sbjct: 7 IIGVAGGTGSGKTTVAKEIFYQFNEK 32
>Y1289_ARCFU (O28980) Hypothetical protein AF1289| Length = 346 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNKR 462 ++VGL G PG GKST+ S++ +R Sbjct: 47 HVVGLTGFPGVGKSTLVSKLTEEFRRR 73
>POTA_STAAW (Q7A169) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 P + KS+ + YD L + L ID +++S Y L GP G GK+T+ Sbjct: 3 PLLSLKSVSKSYDDL-----NILDDIDIDIESGYFYTLLGPSGCGKTTI 46
>POTA_STAAS (Q6GAB5) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 P + KS+ + YD L + L ID +++S Y L GP G GK+T+ Sbjct: 3 PLLSLKSVSKSYDDL-----NILDDIDIDIESGYFYTLLGPSGCGKTTI 46
>POTA_STAAR (Q6GHY6) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 P + KS+ + YD L + L ID +++S Y L GP G GK+T+ Sbjct: 3 PLLSLKSVSKSYDDL-----NILDDIDIDIESGYFYTLLGPSGCGKTTI 46
>POTA_STAAN (Q7A679) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 P + KS+ + YD L + L ID +++S Y L GP G GK+T+ Sbjct: 3 PLLSLKSVSKSYDDL-----NILDDIDIDIESGYFYTLLGPSGCGKTTI 46
>POTA_STAAM (Q99V03) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 P + KS+ + YD L + L ID +++S Y L GP G GK+T+ Sbjct: 3 PLLSLKSVSKSYDDL-----NILDDIDIDIESGYFYTLLGPSGCGKTTI 46
>POTA_STAAC (Q5HGY5) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTV 429 P + KS+ + YD L + L ID +++S Y L GP G GK+T+ Sbjct: 3 PLLSLKSVSKSYDDL-----NILDDIDIDIESGYFYTLLGPSGCGKTTI 46
>YCXD_CYAPA (P48334) Probable ABC transporter ATP-binding protein in ycf23-apcF| intergenic region (ORF244) Length = 244 Score = 30.0 bits (66), Expect = 5.2 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = +1 Query: 370 LDSKYIVGLAGPPGAGKSTVASEVVRRV 453 ++S ++G+ GP GAGKST+ ++ ++ Sbjct: 31 IESGKLIGIIGPNGAGKSTLLKTIIEQI 58
>UVRA_CLOAB (Q97LQ1) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 939 Score = 30.0 bits (66), Expect = 5.2 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Frame = +1 Query: 250 KHNVTCYQRQGAPQIEA-KSMEEVYDALAEHLLSALKSIDNLDSKYIVGL----AGPPGA 414 K ++T G +IE K E E + + ++ N++ K+ VGL G G+ Sbjct: 585 KESITGQYLTGVKKIEVPKERREAGKNFIEIVGAKENNLKNVNVKFPVGLFTCVTGVSGS 644 Query: 415 GKSTVASEVV-RRVNKRWSQKHAKDGSPNS 501 GKST+ +E++ + +NK+ ++ G S Sbjct: 645 GKSTLVNEILYKALNKKINRSKLNPGKYKS 674
>UREG_HAEIN (P44396) Urease accessory protein ureG| Length = 225 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = +1 Query: 367 NLDSKYI-VGLAGPPGAGKSTVASEVVRRVNKRWS 468 N+ YI +G+AGP GAGK+ + ++ R + ++S Sbjct: 13 NIMRNYIKIGVAGPVGAGKTALIEKLTREIASKYS 47
>KCY_HALSA (Q9HPA5) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 192 Score = 30.0 bits (66), Expect = 5.2 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVAS 435 +V ++GPPG+GKSTVAS Sbjct: 2 LVTISGPPGSGKSTVAS 18
>FLHF_HELPY (O25679) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 459 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +1 Query: 367 NLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKH 477 NL K I+ L GP G GK+T +++ R ++ ++K+ Sbjct: 252 NLRQKRILMLVGPTGVGKTTTLAKLAARYSRMLAKKY 288
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = +1 Query: 316 VYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKR 462 VY+ L + L + K I+ + I+ + G G+GK+T +++ R KR Sbjct: 79 VYEELTKFLGTEAKPIEIKEKPTILLMVGVQGSGKTTTVAKLARHFQKR 127
>PSTB_CHLTE (Q8KDZ5) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 286 Score = 30.0 bits (66), Expect = 5.2 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = +1 Query: 280 GAPQIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 G P + A+ Y A+K ++ + SKY+ + GP G GKST + R+N Sbjct: 36 GKPHVVARDFSIYYGEF-----EAVKKVNAEILSKYVTAIIGPSGCGKSTFL-RAINRMN 89 Query: 457 KRWSQKHAKDGSPNSDEDI 513 H EDI Sbjct: 90 DLIPNCHTTGALMFDGEDI 108
>FLHF_HELPJ (Q9ZM34) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 455 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +1 Query: 367 NLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKH 477 NL K I+ L GP G GK+T +++ R ++ ++K+ Sbjct: 248 NLRQKRILMLVGPTGVGKTTTLAKLAARYSRMLAKKY 284
>CBIO1_THETN (Q8R7Y5) Cobalt import ATP-binding protein cbiO 1| Length = 286 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = +1 Query: 292 IEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPGAGKSTVASEV 441 I+ +++ +Y+ + ALK I+ ++D + VG+ G G+GKST+ ++ Sbjct: 3 IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQL 53
>CBIO3_LACJO (Q74I62) Putative cobalt import ATP-binding protein cbiO 3| Length = 573 Score = 30.0 bits (66), Expect = 5.2 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTV 429 P IE K Y++ AE L + N K + LAGP G+GKST+ Sbjct: 4 PIIEFKDFSFKYNSQAEPTLKNINLKINKGEKIL--LAGPSGSGKSTI 49
>PGK2_METKA (Q8TGY9) 2-phosphoglycerate kinase (EC 2.7.2.-) (2PGK)| Length = 327 Score = 30.0 bits (66), Expect = 5.2 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +1 Query: 307 MEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRV 453 +EE+ + LAE + I + IV + G G G ST+ASEV R+ Sbjct: 89 LEEIDETLAERY-ELWRRIKKREEPIIVLIGGASGVGTSTIASEVGHRL 136
>COAA_RHILO (Q98CS9) Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid| kinase) Length = 319 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = +1 Query: 358 SIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDG 537 ++D + + +I+G+AG GKST A V++ + RW SP D ++ DG Sbjct: 83 AVDIVKTPFIIGIAGSVAVGKSTTA-RVLKELLARW------PSSPKVD-----LITTDG 130 Query: 538 FHL 546 F L Sbjct: 131 FLL 133
>YKI9_SCHPO (Q9UUH3) Kinase C630.09c (EC 2.7.-.-)| Length = 277 Score = 30.0 bits (66), Expect = 5.2 Identities = 11/27 (40%), Positives = 21/27 (77%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNKR 462 +I+G++GP G+GKST+AS + + ++ Sbjct: 26 FILGISGPQGSGKSTLASALDTELTRK 52
>UREG_ACTPL (O54424) Urease accessory protein ureG| Length = 211 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Frame = +1 Query: 379 KYI-VGLAGPPGAGKSTVASEVVRRVNKRWS 468 KYI +G+AGP GAGK+ + + R + ++S Sbjct: 3 KYIKIGVAGPVGAGKTALIERLTREIASKYS 33
>KCY_CLOTE (Q895G1) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 226 Score = 30.0 bits (66), Expect = 5.2 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 379 KYIVGLAGPPGAGKSTVASEVVRRVN 456 + +V + GP GAGKST+A V ++ N Sbjct: 2 RVLVAIDGPAGAGKSTIAKLVAKKFN 27
>RECA_CHLAB (Q5L4P3) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 5.2 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 10/92 (10%) Frame = +1 Query: 331 AEHLLSALKS----------IDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHA 480 A H +S +K+ I + IV + GP +GK+T+A+ +V K Sbjct: 34 ASHEISTIKTGALSLDLALGIGGVPKGRIVEIFGPESSGKTTLATHIVANAQKMGGVAAY 93 Query: 481 KDGSPNSDEDIATMLPMDGFHLYRSQLDAMED 576 D D A+++ + L SQ D ED Sbjct: 94 IDAEHALDPSYASLIGANIHDLMISQPDCGED 125
>LON1_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 30.0 bits (66), Expect = 5.2 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +1 Query: 226 VTRATWKK-KHNVTCYQRQGAPQIEAKS---MEEVYDALAEHLLSALKSIDNLDSKYIVG 393 +T W+ K N Q + +I K+ M EV D + E++ S LK + I+ Sbjct: 329 ITELPWRDFKINFDKLDLQKSKKILDKTHYGMNEVKDRIIEYI-SVLK-LRKTQKGAIIL 386 Query: 394 LAGPPGAGKSTVASEVVR 447 L GPPG GK+++ + + + Sbjct: 387 LVGPPGVGKTSIGAAIAK 404
>LON_MYCSM (O31147) ATP-dependent protease La (EC 3.4.21.53)| Length = 779 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Frame = +1 Query: 307 MEEVYDALAEHLL-------SALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 + +V D + E+L + + S ++ LAGPPG GK+++ V R +++++ Sbjct: 314 LSDVKDRIVEYLAVRGAAPQRGMAVVGGRGSGAVMVLAGPPGVGKTSLGESVARALDRKF 373
>COAA_BRAJA (Q89WM2) Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid| kinase) Length = 318 Score = 30.0 bits (66), Expect = 5.2 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 Query: 292 IEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQ 471 I +M+ +Y A + L +I + YI+G+AG GKST A V++ + RWS Sbjct: 65 IYVDAMQRLYYAERQFL-----NIRDRKMPYIIGVAGSVAVGKSTTA-RVLQALLARWSP 118 Query: 472 KHAKD 486 + D Sbjct: 119 RPKVD 123
>TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 30.0 bits (66), Expect = 5.2 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Frame = +1 Query: 313 EVYDALAEHLLSALKSID-NLDSKYI-----VGLAGPPGAGKSTVASEVVRRVNKRWSQK 474 EV L +++++ L D N+DS I V L GPPG GK+++ + +++ R S + Sbjct: 144 EVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSR 203 Query: 475 H 477 + Sbjct: 204 Y 204
>RFC1_HUMAN (P35251) Activator 1 140 kDa subunit (Replication factor C large| subunit) (A1 140 kDa subunit) (RF-C 140 kDa subunit) (Activator 1 large subunit) (DNA-binding protein PO-GA) Length = 1148 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 394 LAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 L+GPPG GK+T AS V + + + + +A D Sbjct: 649 LSGPPGVGKTTTASLVCQELGYSYVELNASD 679
>LON_CAUCR (P52977) ATP-dependent protease La (EC 3.4.21.53)| Length = 799 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/73 (21%), Positives = 36/73 (49%) Frame = +1 Query: 247 KKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKST 426 K + + +G + +E+V + + E+L A+++ N I+ L GPPG GK++ Sbjct: 303 KTKKIDLVESEGILDADHYGLEKVKERILEYL--AVQARTNSLKGPILCLVGPPGVGKTS 360 Query: 427 VASEVVRRVNKRW 465 + + + + + Sbjct: 361 LGKSIAKATGREF 373
>RUVB_CORJK (Q4JVD9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 354 Score = 29.6 bits (65), Expect = 6.7 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +1 Query: 394 LAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLP--MDGFHLYRSQLDA 567 LAGPPG GK+T+A + + + S + + D+A ML M+G L+ ++ Sbjct: 75 LAGPPGLGKTTMAMIIAQELGS--SLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHR 132 Query: 568 MEDP*E 585 M P E Sbjct: 133 MARPAE 138
>ABCBA_HUMAN (Q9NRK6) ATP-binding cassette sub-family B member 10, mitochondrial| precursor (ATP-binding cassette transporter 10) (ABC transporter 10 protein) (Mitochondrial ATP-binding cassette 2) (M-ABC2) Length = 738 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +1 Query: 277 QGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 QGA +E K++ Y A E + S+ ++ S + L GP G+GKSTV S ++R N Sbjct: 489 QGA--LEFKNVHFAYPARPEVPIFQDFSL-SIPSGSVTALVGPSGSGKSTVLSLLLRLYN 545
>RUVB_SALRD (Q2S3F9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 344 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +1 Query: 295 EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKR 462 E E++ + L + +AL+ + LD V L+GPPG GK+T+A + + R Sbjct: 31 EFVGQEKIKENLNVFMKAALQRGETLDH---VLLSGPPGLGKTTLAHIIANEMGAR 83
>MMAA_MOUSE (Q8C7H1) Methylmalonic aciduria type A homolog, mitochondrial| precursor Length = 415 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = +1 Query: 388 VGLAGPPGAGKST 426 VGL+GPPGAGKST Sbjct: 143 VGLSGPPGAGKST 155
>E13B_NICPL (P23431) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 365 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/76 (25%), Positives = 33/76 (43%) Frame = +1 Query: 298 AKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKH 477 ++ ++DA+ + + +AL+ +V +G P AG + K Q H Sbjct: 241 SRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDNAATYLKNLIQ-H 299 Query: 478 AKDGSPNSDEDIATML 525 AK+GSP I T + Sbjct: 300 AKEGSPRKPRPIETYI 315
>RECA_PSEPK (Q88ME4) Protein recA (Recombinase A)| Length = 355 Score = 29.6 bits (65), Expect = 6.7 Identities = 27/102 (26%), Positives = 39/102 (38%) Frame = +1 Query: 268 YQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVR 447 ++RQG P I S+ L I L IV + GP +GK+T+ V+ Sbjct: 31 HERQGIPAISTGSLG----------LDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA 80 Query: 448 RVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLDAME 573 K + D D + A L ++ L SQ D E Sbjct: 81 EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
>CYSC_AERPE (Q9YCR6) Probable adenylyl-sulfate kinase (EC 2.7.1.25) (APS| kinase) (Adenosine-5'phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) Length = 186 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = +1 Query: 343 LSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDG 489 + AL + ++ +V L G PG+GK+T+A+ + + K + DG Sbjct: 1 MQALTTYKCIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDG 49
>YGHR_ECOLI (P64572) Hypothetical ATP-binding protein yghR| Length = 252 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDG-SPNSDEDIATMLPMDGFHLYR 552 ++ + G G GKST+ +++V+ + + W + G D D LP+ G L R Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLER 79
>YGHR_ECOL6 (P64573) Hypothetical ATP-binding protein yghR| Length = 252 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDG-SPNSDEDIATMLPMDGFHLYR 552 ++ + G G GKST+ +++V+ + + W + G D D LP+ G L R Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLER 79
>PSTB_XANCP (Q8PAG0) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 267 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query: 253 HNVTCYQRQGAP------QIEAKSMEEVYDALAEHLLSALKSID-NLDSKYIVGLAGPPG 411 H + +GAP ++ A++++ YD ALK I+ + K + L GP G Sbjct: 2 HRIAVPAAKGAPTAQAPVKVAARNLDFYYDKY-----HALKGINIEIPEKRVTALIGPSG 56 Query: 412 AGKSTV 429 GKST+ Sbjct: 57 CGKSTL 62
>PSTB2_STRP6 (Q5XBY6) Phosphate import ATP-binding protein pstB 2 (EC 3.6.3.27)| (Phosphate-transporting ATPase 2) (ABC phosphate transporter 2) Length = 267 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKY-IVGLAG 402 +T W ++H +T + A + K + Y A A+K ID K+ I L G Sbjct: 1 MTEYNWNERHIITFPEETLA--LATKDLHVYYGAK-----EAIKGIDMQFEKHKITALIG 53 Query: 403 PPGAGKST 426 P G GKST Sbjct: 54 PSGCGKST 61
>PSTB2_STRP3 (P63379) Phosphate import ATP-binding protein pstB 2 (EC 3.6.3.27)| (Phosphate-transporting ATPase 2) (ABC phosphate transporter 2) Length = 267 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKY-IVGLAG 402 +T W ++H +T + A + K + Y A A+K ID K+ I L G Sbjct: 1 MTEYNWNERHIITFPEETLA--LATKDLHVYYGAK-----EAIKGIDMQFEKHKITALIG 53 Query: 403 PPGAGKST 426 P G GKST Sbjct: 54 PSGCGKST 61
>PSTB2_STRP1 (P63378) Phosphate import ATP-binding protein pstB 2 (EC 3.6.3.27)| (Phosphate-transporting ATPase 2) (ABC phosphate transporter 2) Length = 267 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKY-IVGLAG 402 +T W ++H +T + A + K + Y A A+K ID K+ I L G Sbjct: 1 MTEYNWNERHIITFPEETLA--LATKDLHVYYGAK-----EAIKGIDMQFEKHKITALIG 53 Query: 403 PPGAGKST 426 P G GKST Sbjct: 54 PSGCGKST 61
>KPPR_ARATH (P25697) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)| (Phosphopentokinase) (PRKase) (PRK) Length = 395 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW--SQKHAKDGSPNSD---EDIATMLPMDGFH 543 ++GLA G GKST +RR+ + + K K G+P+S+ D T++ +D +H Sbjct: 52 VIGLAADSGCGKST----FMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYH 105
>ERA_UREPA (Q9PPZ9) GTP-binding protein era homolog| Length = 300 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRR-----VNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLY 549 IV + G P GKST+ + ++++ NK + ++A DE GFH Sbjct: 7 IVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGFHEP 66 Query: 550 RSQLD 564 ++LD Sbjct: 67 SNKLD 71
>THTR_SACER (P16385) Putative thiosulfate sulfurtransferase (EC 2.8.1.1)| (Rhodanese-like protein) Length = 281 Score = 29.6 bits (65), Expect = 6.7 Identities = 21/84 (25%), Positives = 36/84 (42%) Frame = +1 Query: 262 TCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEV 441 T Y+ Q +EV DA+ L ++S D K + P + + A + Sbjct: 133 TAYKAQEPDASIRAFRDEVVDAIGNKNLVDVRSPDEFAGKLLAPAHLPQESAQR--AGHI 190 Query: 442 VRRVNKRWSQKHAKDGSPNSDEDI 513 +N WS+ +DG+ SDE++ Sbjct: 191 PSAINVPWSKAANEDGTFKSDEEL 214
>COAA_LEIXX (Q6AD31) Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid| kinase) Length = 322 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/61 (29%), Positives = 33/61 (54%) Frame = +1 Query: 382 YIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQL 561 +++G+AG GKST+A ++R + RW D +P + ++ DGF L ++L Sbjct: 98 FVIGVAGSVAVGKSTIA-RLLRELLSRW------DDTPRVE-----LVTTDGFLLPNAEL 145 Query: 562 D 564 + Sbjct: 146 E 146
>KTHY_LACLA (Q9CIG4) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 211 Score = 29.6 bits (65), Expect = 6.7 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNK 459 ++ L GP GAGK+TV E++ + K Sbjct: 5 LISLEGPDGAGKTTVLKEILPEIQK 29
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Frame = +1 Query: 361 IDNLDSKYIVG--LAGPPGAGKSTVASEVVRRVNKR 462 I+ L K++ G L GPPG GK+ +A ++ + +N R Sbjct: 322 IEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAR 357
>LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precursor (EC| 3.4.21.-) Length = 885 Score = 29.6 bits (65), Expect = 6.7 Identities = 9/27 (33%), Positives = 20/27 (74%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW 465 ++ GPPG GK+++AS + + +N+++ Sbjct: 404 VLCFVGPPGVGKTSLASSIAKALNRKF 430
>MYO2B_SACCA (Q875X4) Myosin-2B (Class V unconventional myosin MYO2B) (Type V| myosin heavy chain MYO2B) (Myosin V MYO2B) Length = 1419 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Frame = +1 Query: 322 DALAEHLLS----ALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVR--------RVNKRW 465 D +A H+ + A + + N D + ++G GAGK+ A ++R NK Sbjct: 139 DEMAPHIFAIAEEAYREMINNDQNQTIIVSGESGAGKTVSAKYIMRFFASVEEEHFNKEG 198 Query: 466 SQKHAKDGSPNSDEDIATMLPMDGF 540 KH ++ S + +AT M+ F Sbjct: 199 DSKHQEEMSDIEVKILATNPVMEAF 223
>KPPR_CHLRE (P19824) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)| (Phosphopentokinase) (PRKase) (PRK) Length = 375 Score = 29.6 bits (65), Expect = 6.7 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Frame = +1 Query: 274 RQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRV 453 R AP+ A+S A ++ A K D ++GLA G GKST +RR+ Sbjct: 6 RAPAPRATAQSRVTANRARRSLVVRADK-----DKTVVIGLAADSGCGKST----FMRRM 56 Query: 454 NKRWS--QKHAKDGSPNSD---EDIATMLPMDGFH 543 + K G+P+S+ D+ T++ +D +H Sbjct: 57 TSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYH 91
>TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 11/65 (16%) Frame = +1 Query: 316 VYDA-LAEHLL-----SALKSIDNLDSKYI-----VGLAGPPGAGKSTVASEVVRRVNKR 462 VYD + HLL + L S N+DS I V L GPPG GK+++ + +++ R Sbjct: 140 VYDVEVKSHLLDYVMTTVLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIR 199 Query: 463 WSQKH 477 S ++ Sbjct: 200 LSSRY 204
>MMAA_HUMAN (Q8IVH4) Methylmalonic aciduria type A protein, mitochondrial| precursor Length = 418 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = +1 Query: 388 VGLAGPPGAGKST 426 VGL+GPPGAGKST Sbjct: 146 VGLSGPPGAGKST 158
>RECA_LACAC (Q5FL82) Protein recA (Recombinase A)| Length = 363 Score = 29.3 bits (64), Expect = 8.8 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA V V KR D D A L +D L SQ + Sbjct: 61 IIEVYGPESSGKTTVALHAVAEVQKRGGTAAYIDAENAMDPAYAEALGVDIDSLILSQPN 120 Query: 565 AMED 576 E+ Sbjct: 121 TGEE 124
>RUVB_BURTA (Q2SZ55) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 356 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = +1 Query: 295 EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRV 453 E E+V D L + +A + + LD V L GPPG GK+T+A + R + Sbjct: 36 EYVGQEKVRDQLEIFIEAAKRRAEALDH---VLLFGPPGLGKTTLAHIIAREM 85
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 29.3 bits (64), Expect = 8.8 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +1 Query: 157 VRSKVVKAMPSLSVSFQPAFHQPVTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDA--L 330 +R V ++ ++ + P VT T ++K +VT Y G + + + + EV + L Sbjct: 172 MRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVT-YSDVGGCKDQIEKLREVVELPLL 230 Query: 331 AEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVN 456 + + L +D + L GPPG GK+ A V R + Sbjct: 231 SPERFATL----GIDPPKGILLYGPPGTGKTLCARAVANRTD 268
>LONH3_ARATH (Q9M9L8) Putative Lon protease homolog 3, mitochondrial precursor| (EC 3.4.21.-) Length = 924 Score = 29.3 bits (64), Expect = 8.8 Identities = 9/27 (33%), Positives = 20/27 (74%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW 465 I+ L+GPPG GK+++ + R +++++ Sbjct: 442 IICLSGPPGVGKTSIGRSIARALDRKF 468
>KCY_SULTO (Q975K7) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 180 Score = 29.3 bits (64), Expect = 8.8 Identities = 11/27 (40%), Positives = 21/27 (77%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW 465 I+ ++GPPG+GKSTVA + + ++ ++ Sbjct: 2 IIVISGPPGSGKSTVAKILSKNLSLKY 28
>LON_ERWAM (P46067) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/53 (28%), Positives = 30/53 (56%) Frame = +1 Query: 307 MEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 +E V D + E+L A++S + I+ L GPPG GK+++ + + +++ Sbjct: 327 LERVKDRILEYL--AVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAKATGRKY 377
>KPPR_SPIOL (P09559) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)| (Phosphopentokinase) (PRKase) (PRK) Length = 402 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRW--SQKHAKDGSPNSD---EDIATMLPMDGFH 543 ++GLA G GKST +RR+ + + + K G+P+S+ D T++ +D FH Sbjct: 58 VIGLAADSGCGKST----FMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFH 111
>RECA_LACJO (P62216) Protein recA (Recombinase A)| Length = 360 Score = 29.3 bits (64), Expect = 8.8 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLD 564 I+ + GP +GK+TVA V V KR D D A L +D L SQ + Sbjct: 61 IIEVYGPESSGKTTVALHAVAEVQKRGGTAAYIDAENAMDPAYAEALGVDIDSLILSQPN 120 Query: 565 AMED 576 E+ Sbjct: 121 TGEE 124
>PGK2_PYRHO (O57882) 2-phosphoglycerate kinase (EC 2.7.2.-) (2PGK)| Length = 301 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKR 462 I+ L GP G GKST+A+E+ R+ R Sbjct: 92 IILLGGPTGVGKSTIATELAFRLGIR 117
>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) Length = 1067 Score = 29.3 bits (64), Expect = 8.8 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQI---EAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGL 396 +T+ W K+ +V + A ++ + +++V D + E L A+ + I+ L Sbjct: 520 ITQLPWGKR-SVENFDLDHAKEVLDRDHYGLKDVKDRVLE--LVAVGKLRGTMQGKIMCL 576 Query: 397 AGPPGAGKSTVASEVVRRVNKRW 465 GPPG GK++V + +N+ + Sbjct: 577 VGPPGVGKTSVGKSIASALNREF 599
>CLPX_LEIXX (Q6AFZ6) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 424 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +1 Query: 331 AEHLLSALKSIDNLD-SKYIVGLAGPPGAGKSTVASEVVRRVN 456 A ++A +ID+++ +K + L GP G GK+ +A + RR+N Sbjct: 100 ARQAITAADAIDDVEIAKSNILLIGPTGCGKTYLAQTLARRLN 142
>Y1713_FUSNN (Q8R5Z8) Hypothetical RNA methyltransferase FN1713 (EC 2.1.1.-)| Length = 464 Score = 29.3 bits (64), Expect = 8.8 Identities = 18/73 (24%), Positives = 34/73 (46%) Frame = +1 Query: 289 QIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWS 468 QI K + +YD A+ DN+D+KYIV +G T+ + ++ K ++ Sbjct: 295 QINVKQAKRLYDI-------AISFFDNIDNKYIVDAY----SGTGTIGMIIAKKAKKVYA 343 Query: 469 QKHAKDGSPNSDE 507 + K S + ++ Sbjct: 344 IEIVKSASEDGEK 356
>Y1006_METJA (Q58412) Hypothetical ATP-binding protein MJ1006| Length = 359 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +1 Query: 334 EHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKR 462 E L+ LK+ L+ I+ + GP +GKSTV V+ ++K+ Sbjct: 24 EKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKK 66
>CLPB_LACLC (O68185) Chaperone clpB| Length = 867 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 21/108 (19%) Frame = +1 Query: 226 VTRATWKKKHNVTCYQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVG---- 393 V+ K K + +G ++ +++ EE Y AL ++ + + + + + ++G Sbjct: 129 VSHGLTKAKAQAAIEKLRGGDKVTSQNAEETYKALEKYGVDLVAQVKSGNQDPVIGRDEE 188 Query: 394 -----------------LAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 L G PG GK+ + + +R+ ++ ++ KD Sbjct: 189 IRDVIRVLSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKD 236
>CBIO3_STRMU (Q93D97) Putative cobalt import ATP-binding protein cbiO 3| Length = 558 Score = 29.3 bits (64), Expect = 8.8 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 286 PQIEAKSMEEVYDALAEHLLSALK-SIDNLDSKYIVGLAGPPGAGKSTV 429 P IE K YDA AE L + SI+ + I+G P G+GKST+ Sbjct: 3 PFIEFKDFSFKYDAQAEPTLKEITLSIEKGEKVLIIG---PSGSGKSTI 48
>UCK_DROME (Q9VC99) Probable uridine-cytidine kinase (EC 2.7.1.48) (UCK)| (Uridine monophosphokinase) (Cytidine monophosphokinase) Length = 260 Score = 29.3 bits (64), Expect = 8.8 Identities = 10/32 (31%), Positives = 22/32 (68%) Frame = +1 Query: 364 DNLDSKYIVGLAGPPGAGKSTVASEVVRRVNK 459 D + S +++G+AG +GKSTV +++ ++ + Sbjct: 22 DEVKSPFLIGVAGGTASGKSTVCKKIMEQLGQ 53
>RFCL_PYRAB (Q9V2G3) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (PabRFC large subunit) Length = 478 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 367 NLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 N K + LAGPPG+GK+T + R N + +A D Sbjct: 38 NPPKKKALLLAGPPGSGKTTTVYALAREYNFEVIELNASD 77
>PGK2_PYRFU (Q8U4K7) 2-phosphoglycerate kinase (EC 2.7.2.-) (2PGK)| Length = 302 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRVNKR 462 I+ L GP G GKST+A+E+ R+ R Sbjct: 92 IILLGGPTGVGKSTIATELAFRLGIR 117
>KCY_LEPIN (Q8F6P4) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 229 Score = 29.3 bits (64), Expect = 8.8 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +1 Query: 385 IVGLAGPPGAGKSTVASEVVRRV 453 ++ L GP G+GKSTVA ++ ++ Sbjct: 5 VIALDGPAGSGKSTVARQIAEKI 27
>RECA_PSEAE (P08280) Protein recA (Recombinase A)| Length = 346 Score = 29.3 bits (64), Expect = 8.8 Identities = 27/102 (26%), Positives = 39/102 (38%) Frame = +1 Query: 268 YQRQGAPQIEAKSMEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVR 447 ++RQ P I S+ L I L IV + GP +GK+T+ V+ Sbjct: 31 HERQAIPAISTGSLG----------LDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA 80 Query: 448 RVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRSQLDAME 573 K+ + D D D A L ++ L SQ D E Sbjct: 81 EAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
>RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 486 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%) Frame = +1 Query: 301 KSMEEV--YDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVA 432 KS+ +V ++ + L+ ++SI ++ + LAGPPG+GK+T+A Sbjct: 11 KSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLA 56
>LON_BRECH (P36772) ATP-dependent protease La (EC 3.4.21.53)| Length = 779 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/53 (30%), Positives = 31/53 (58%) Frame = +1 Query: 307 MEEVYDALAEHLLSALKSIDNLDSKYIVGLAGPPGAGKSTVASEVVRRVNKRW 465 +E+ + + E+L A++ + N I+ L GPPG GK+++A V R + + + Sbjct: 326 LEKPKERVLEYL--AVQKLVNSMRGPILCLVGPPGVGKTSLARSVARALGREF 376
>DBP7_GIBZE (Q4HZ68) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 744 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 Query: 449 ASISVGLRSMQKMVHRIQMKILRQCFPWMVSTFI 550 A I R + K VH + K++R FPW+VST I Sbjct: 232 AIIVAPTRELAKQVHTVLEKLIRP-FPWLVSTAI 264
>RFCL_PYRAE (Q8ZYK3) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 422 Score = 29.3 bits (64), Expect = 8.8 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 394 LAGPPGAGKSTVASEVVRRVNKRWSQKHAKD 486 LAGPPG GK+T+ + R + + +A D Sbjct: 61 LAGPPGVGKTTLVHALAREIRYELIELNASD 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,613,721 Number of Sequences: 219361 Number of extensions: 1553155 Number of successful extensions: 9007 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 8659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8998 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
