>RPIA_LACPL (Q88YY5) Ribose-5-phosphate isomerase A (EC 5.3.1.6)|
           (Phosphoriboisomerase A) (PRI)
          Length = 227

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 492 HVLPVRAEHGVAERLLHGVGAAEHG 418
           H+ P+   H +AE L+H VG  EHG
Sbjct: 179 HIDPITDPHALAEDLIHMVGVVEHG 203

>SPO14_SCHPO (Q10659) Membrane glycoprotein spo14 (SEC12-like protein)|
           (Sporulation-specific protein 14)
          Length = 395

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/78 (26%), Positives = 34/78 (43%)
 Frame = +1

Query: 268 YSAARRLWAAGMMRDNDDKKGVLVVQSLRNVIMGSTLMATTSVLFCTGIAAVLSSTYSVK 447
           YS+  +LW  GM+RD  + KGV      +   M     A  S+ F +     LS  Y   
Sbjct: 239 YSSKNQLWRFGMIRDLKNAKGVTCFCCDKENGMIIVAGADCSIRFMSLDLTKLSQVYKHS 298

Query: 448 KPLSDAVFGAHGEYMMAL 501
            P++D       E ++++
Sbjct: 299 LPVTDMQLSPDSEALVSV 316

>TAPC_AERHY (P45793) Type IV pilus assembly protein tapC|
          Length = 413

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +1

Query: 253 TAFGVYSAARRLWAAGMMRDNDDKKGVLVVQSLRNVIMGSTLMATTSVLFCTGIAAVLSS 432
           TAF ++   R   A+  ++DN DK   ++   +  +I+    MA          A  LS+
Sbjct: 239 TAFAIFLYVRAWRASQKVKDNTDK--FILTIPVVGMILHKAAMAR--------FARTLST 288

Query: 433 TYSVKKPLSDAVF---GAHGEYM 492
           T+S   PL DA+    GA G Y+
Sbjct: 289 TFSAGIPLVDALISAAGASGNYV 311

>RPIA_LACAC (Q5FLF6) Ribose-5-phosphate isomerase A (EC 5.3.1.6)|
           (Phosphoriboisomerase A) (PRI)
          Length = 230

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 483 PVRAEHGVAERLLHGVGAAEHG 418
           P+ A HG+A+ L H VG  EHG
Sbjct: 186 PIPAPHGLADYLDHTVGVVEHG 207


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,047,739
Number of Sequences: 219361
Number of extensions: 771548
Number of successful extensions: 3173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)