ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13g05 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 226 bits (576), Expect = 3e-59 Identities = 115/145 (79%), Positives = 125/145 (86%), Gaps = 3/145 (2%) Frame = +1 Query: 109 MDAFYSTSSA---AASGWGHDSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIA 279 MDAFYSTSSA AASGWG+DSLKNFRQISPAVQSHLKLVYLTLC ALA+SAVGAYLH+A Sbjct: 1 MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVA 60 Query: 280 LNIGGMLTMLACVGTIAWMFSVPVYEERKRFXXXXXXXXXXXXSVGPLIELAIDFDPSIL 459 LNIGGMLTML CVG+IAW+FSVPV+EERKRF SVGPLI+LA+DFD SIL Sbjct: 61 LNIGGMLTMLGCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLAVDFDSSIL 120 Query: 460 VTGFVGTAIAFGCFSGAAIIAKRRE 534 VT FVGTAIAFGCF+ AAI+AKRRE Sbjct: 121 VTAFVGTAIAFGCFTCAAIVAKRRE 145
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 174 bits (442), Expect = 1e-43 Identities = 87/144 (60%), Positives = 104/144 (72%), Gaps = 2/144 (1%) Frame = +1 Query: 109 MDAFYS--TSSAAASGWGHDSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIAL 282 MDAF S S + W +DSLKNFRQISPAVQ+HLK VYLTLC AL +SA GAYLH+ Sbjct: 1 MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLW 60 Query: 283 NIGGMLTMLACVGTIAWMFSVPVYEERKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILV 462 NIGG+LT + C+GT+ W+ S P YE +KR SVGPLI++AID DPSIL+ Sbjct: 61 NIGGILTTIGCIGTMIWLLSCPPYEHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILI 120 Query: 463 TGFVGTAIAFGCFSGAAIIAKRRE 534 T FVGTAIAF CFS AA++A+RRE Sbjct: 121 TAFVGTAIAFVCFSAAAMLARRRE 144
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 86.7 bits (213), Expect = 4e-17 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 4/128 (3%) Frame = +1 Query: 160 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 333 D+L F I+P+ Q HLK VY + + +A GAY+H+ G+L+ L +G + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIW 70 Query: 334 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 507 + + P E +KR +GP ++L I +PSIL T F+GTA+ F CF+ Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTL 130 Query: 508 AAIIAKRR 531 +A+ A+RR Sbjct: 131 SALYARRR 138
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 86.7 bits (213), Expect = 4e-17 Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 4/128 (3%) Frame = +1 Query: 160 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 333 D+L F I+P+ Q HLK VY + + +A GAY+H+ + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIW 70 Query: 334 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 507 + + P E +KR +GP +EL I +PSIL T F+GTA+ F CFS Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSL 130 Query: 508 AAIIAKRR 531 +A+ A+RR Sbjct: 131 SALYARRR 138
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 86.3 bits (212), Expect = 5e-17 Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 4/128 (3%) Frame = +1 Query: 160 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 333 DSL F QIS + Q HLK VY +L + +A G+Y+H+ + GGML++L +G + W Sbjct: 11 DSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFW 70 Query: 334 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 507 + P E +KR + P ++ I +PSI+VT F+GT++ F CF+ Sbjct: 71 LAMTPHNSETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTL 130 Query: 508 AAIIAKRR 531 +A+ AKRR Sbjct: 131 SALYAKRR 138
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 82.8 bits (203), Expect = 6e-16 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Frame = +1 Query: 160 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 333 D+L F I+P+ Q HLK VY + + +A GAY+H+ + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIW 70 Query: 334 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 507 + + P E +KR +GP +E I +PSIL T F+GTA+ F CF+ Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTL 130 Query: 508 AAIIAKRR 531 +A+ A+RR Sbjct: 131 SALYARRR 138
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 82.0 bits (201), Expect = 9e-16 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Frame = +1 Query: 160 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 333 D+L F I+P+ Q HLK VY + + +A GAY+H+ G+L+ L + + Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMIC 70 Query: 334 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 507 + + P E +KR +GP +EL I +PSIL T F+GTA+ F CFS Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSL 130 Query: 508 AAIIAKRR 531 +A+ A+RR Sbjct: 131 SALYARRR 138
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 81.6 bits (200), Expect = 1e-15 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Frame = +1 Query: 160 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 333 D+L F I+P+ Q HLK VY + + +A GAY+H+ + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIW 70 Query: 334 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 507 + + P E +KR +GP +E I +PSIL T F+GTA+ F CF+ Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTL 130 Query: 508 AAIIAKRR 531 +A+ A+RR Sbjct: 131 SALYARRR 138
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 44.3 bits (103), Expect = 2e-04 Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 7/120 (5%) Frame = +1 Query: 190 PAVQSHLKLVYLTLCFALASSAVGAYLHIA--LNIGGMLTMLACVGTIAWMFSVPVYEER 363 P V+ HL VY+ L A++A+GA L + L++G +LA V T+ + + Y++ Sbjct: 25 PYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLG----VLAAVATLVLVLGLHFYKDD 80 Query: 364 -----KRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSGAAIIAKR 528 R ++GPL+ +P+I+++ GT + F S +A++A++ Sbjct: 81 GKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQ 140
>Y044_HAEIN (P44477) Hypothetical protein HI0044| Length = 220 Score = 31.2 bits (69), Expect = 1.9 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Frame = +1 Query: 208 LKLVYLTLCFALASSAVGAYLHIALNIGGMLTMLACVGTIAWMFSVPVYEERKR-FXXXX 384 L+ Y L +A SAV A++ ++LN+ ++ VG +F +R Sbjct: 21 LRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFYGLLFLTNKLADRPAGILAAF 80 Query: 385 XXXXXXXXSVGPLIELAIDFD-PSILVTGFVGTAIAFGCFSGAAIIAKR 528 ++GP++ + + +++ F GTAI F S + K+ Sbjct: 81 AFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVFFACSAYVLTTKK 129
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 30.8 bits (68), Expect = 2.5 Identities = 27/99 (27%), Positives = 38/99 (38%) Frame = -1 Query: 449 GSKSMASSIRGPTEAPSRRAAPISSPNLFLSS*TGTENIQAIVPTQASIVSIPPMFRAMC 270 GS +S R P +A R +P +P + T + A P QAS PP + Sbjct: 4 GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARAPPPQASPA 63 Query: 269 R*APTADEASAKHRVR*TSLRWDCTAGEIWRKFLRESWP 153 R +P S R +S R T R +L + P Sbjct: 64 RASPARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATP 102
>SYP1_YEAST (P25623) Suppressor of yeast profilin deletion| Length = 870 Score = 30.4 bits (67), Expect = 3.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 Query: 165 PQELPPDLPRRAVPPQARLPDS 230 P E+PP P+++ PP A+ PDS Sbjct: 444 PSEVPPSTPQQSSPPTAKEPDS 465
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 30.0 bits (66), Expect = 4.3 Identities = 15/53 (28%), Positives = 29/53 (54%) Frame = -1 Query: 530 LRLAMMAAPEKHPKAMAVPTNPVTRMLGSKSMASSIRGPTEAPSRRAAPISSP 372 +R + A P + + +A+P P +++ S ++ +GP++ P AAP S P Sbjct: 2223 VRASKPAPPPQALQTLALPLTPYAQIIQSLQLSGHAQGPSQGP---AAPPSEP 2272
>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC| 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific processing protease 3) (Deubiquitinating enzyme 3) Length = 512 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 Query: 55 EARPPRSDSIRRAGAGAGMDAFYSTSSAAASGW 153 + R P+SD G +G+D+F SS ASGW Sbjct: 256 DERNPKSDIKISNGIKSGLDSFDDQSSVEASGW 288
>ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor| alphaA-CRYBP1) (Alpha A-crystallin-binding protein I) (Alpha A-CRYBP1) Length = 2688 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -1 Query: 506 PEKHPKAMAVPTNPVTRMLGSKSMASSIRGPTEAPSRRAAPISSPNL 366 PE PK + ++ V R S+ S + PTE P P+S P L Sbjct: 526 PESLPKLIPSNSDHVVRGFSSQDRPSDSQAPTELPKVVVHPVSMPPL 572
>CSF3R_HUMAN (Q99062) Granulocyte colony-stimulating factor receptor precursor| (G-CSF-R) (CD114 antigen) Length = 836 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Frame = +1 Query: 184 ISPAVQSHLKLVYLTLCFALASSAV--------GAYLHIALNIGGMLTMLACVGTIAWMF 339 + PA H+ L+ + A S+ + G+ LHI L + G+L +L C+ AW+ Sbjct: 590 LEPASLYHIHLMAASQAGATNSTVLTLMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLC 649 Query: 340 SVP 348 P Sbjct: 650 CSP 652
>Y402_PASMU (Q9CNM5) Hypothetical protein PM0402| Length = 220 Score = 29.6 bits (65), Expect = 5.6 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 4/111 (3%) Frame = +1 Query: 208 LKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAWMF-SVPVYEERKRFXX 378 L+ Y L LA SAV AY+ ++LN+ G++ MLA G +F + + Sbjct: 21 LRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLA--GFYGLLFLTYKLSNSGLGILS 78 Query: 379 XXXXXXXXXXSVGPLIELAIDFDP-SILVTGFVGTAIAFGCFSGAAIIAKR 528 ++GP++ + + I+V GTA F S + K+ Sbjct: 79 TFAFTGFLGYTLGPILNVYVSHGAGDIVVLALAGTAAVFFACSAYVLTTKK 129
>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC| 3.6.1.-) Length = 1401 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/71 (25%), Positives = 35/71 (49%) Frame = +1 Query: 76 DSIRRAGAGAGMDAFYSTSSAAASGWGHDSLKNFRQISPAVQSHLKLVYLTLCFALASSA 255 D +++ + G+ + S WGHD +FR + ++++ L LV + A ASS+ Sbjct: 615 DLLQKLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLG-SLKTALPLVPVIALSATASSS 673 Query: 256 VGAYLHIALNI 288 + + LN+ Sbjct: 674 IREDIISCLNL 684
>USH_DROME (Q9VPQ6) Zinc-finger protein ush (Protein U-shaped)| Length = 1191 Score = 29.3 bits (64), Expect = 7.3 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 521 AMMAAPEKHPKAMAVPTNPVTRMLGSKSMASS-IRGPTEAPS 399 ++ A P HP +A+PT+P+ + S A+S I GP P+ Sbjct: 432 SLQATPHSHPPFLALPTHPIIIVPCSLIRAASFIPGPLPTPN 473
>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC| 2.7.11.1) (Ste-20-related kinase) (Serine/threonine-protein kinase 39) (Pancreatic serine/threonine-protein kinase) (PS/TK) (PSTK1) Length = 553 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -1 Query: 515 MAAPEKHPKAMAVPTN--PVTRMLGSKSMASSIRGPTEAPSRRAAPISSP 372 MA P P + +P PVT + + A+S P AP+ AAP +P Sbjct: 1 MAEPSGSPVHVQLPQQAAPVTAAAAAPAAATSAPAPAPAPAAPAAPAPAP 50
>TAT_HV1Z6 (P04609) TAT protein (Transactivating regulatory protein)| Length = 86 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 Query: 438 YGKLNQRSNRSPFQEGCTHQQPKP 367 YG+ +R R P Q G THQ P P Sbjct: 47 YGRKKRRQRRRPSQGGQTHQDPIP 70
>TAT_HV1Z2 (P12506) TAT protein (Transactivating regulatory protein)| Length = 86 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 Query: 438 YGKLNQRSNRSPFQEGCTHQQPKP 367 YG+ +R R P Q G THQ P P Sbjct: 47 YGRKKRRQRRRPSQGGQTHQDPIP 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,284,954 Number of Sequences: 219361 Number of extensions: 1491428 Number of successful extensions: 6085 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5418 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6063 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
