>ATNA_DROME (P13607) Sodium/potassium-transporting ATPase alpha chain (EC|
            3.6.3.9) (Sodium pump) (Na+/K+ ATPase)
          Length = 1041

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +1

Query: 115  LVELSHCDLLINSEGR*DLAMGGLSLQHPWAFAFGLLGNVI--SFMTYLAPLPTFYRIYR 288
            +V +   DL+I    R  +   G+     WA  FGL+   +  +F++Y   +    R+Y 
Sbjct: 944  IVVVQWADLIICKTRRNSIFQQGM---RNWALNFGLVFETVLAAFLSYCPGMEKGLRMYP 1000

Query: 289  SKSTQGFQSVPYVVALF 339
             K    F ++P+ +A+F
Sbjct: 1001 LKLVWWFPAIPFALAIF 1017

>KCNB2_CANFA (Q95167) Potassium voltage-gated channel subfamily B member 2|
           (Voltage-gated potassium channel subunit Kv2.2)
           (Fragment)
          Length = 809

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = +1

Query: 121 ELSHCDLLINSEGR*DLAMGGLSLQHPWAFAFGLLGNVISFMTYLAPLPTFYRIYRSKST 300
           +L+H + + N+    +  +  LS  + W F  G L NVI  +  L    T +    +KS 
Sbjct: 232 QLAHVEAVCNAWFTMEYLLRFLSSPNKWKFFKGPL-NVIDLLAILPYYVTIFLTESNKSV 290

Query: 301 QGFQSVPYVVALFSAM 348
             FQ+V  VV +F  M
Sbjct: 291 LQFQNVRRVVQIFRIM 306

>YDDG_ECOLI (P46136) Inner membrane protein yddG|
          Length = 274

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 274 YRIYRSKSTQGFQSVPYVVALFSAMLWIYYALLKSDECLLIT 399
           Y    +K  +GF  +   V L  A LW+YY L    E +  T
Sbjct: 153 YCTVTNKYARGFNGITVFVLLTGASLWVYYFLTPQPEMIFST 194

>UL71_HCMVA (P16823) Protein UL71|
          Length = 361

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 384 LVRLEQRVVDPQHRTEERHNIRDRLEPLRRFAPVDPVERRQWGEVGHER 238
           ++R +QR+++     +E   +    EP+++  PV+PV+++  G   H R
Sbjct: 240 VMRFDQRLLEEGDEEDEVTVMSPSPEPVQQQPPVEPVQQQPQGRGSHRR 288

>YMP0_YEAST (Q03687) Hypothetical 46.9 kDa protein in PLB1-HXT2 intergenic|
           region
          Length = 405

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 23/91 (25%), Positives = 37/91 (40%)
 Frame = +1

Query: 202 WAFAFGLLGNVISFMTYLAPLPTFYRIYRSKSTQGFQSVPYVVALFSAMLWIYYALLKSD 381
           W     +  N+ISF    +   T   I + K+  GF        L +++L I Y L+   
Sbjct: 46  WLTMQFIANNLISFTPLFSYGTTIISIEKCKTALGFSIDICATMLIASILRISYYLITPY 105

Query: 382 ECLLITINSAGCVIETIYIIVYLTYAPXQAK 474
           E  L+  +     I+ I +   L Y P + K
Sbjct: 106 EITLLRQSLVMIFIQLILLRTSLKYRPDEYK 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,247,474
Number of Sequences: 219361
Number of extensions: 1406343
Number of successful extensions: 4842
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4841
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)