>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 46/102 (45%), Positives = 65/102 (63%)
 Frame = +3

Query: 300 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 479
           W   +RGG+A+E+A   L FNVHP+ M+IG + L  +A++VY+VF      T K+ H +L
Sbjct: 35  WLGAYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKILHGLL 91

Query: 480 HAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLY 605
           H +A V+  VG+   F +H   GIA+LYSLHSW GI    L+
Sbjct: 92  HVLAFVIALVGLVAVFDYHRKKGIADLYSLHSWCGILVFVLF 133

>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 46/106 (43%), Positives = 65/106 (61%)
 Frame = +3

Query: 288 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 467
           M   W   +RGG+A+E+A   L FNVHP+ M+IG + L  +A++VY+VF      T K+ 
Sbjct: 31  MTGAWLGMYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKVL 87

Query: 468 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLY 605
           H +LH  A V+  VG+   F+ H   G A+LYSLHSW GI   +L+
Sbjct: 88  HGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALF 133

>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 46/106 (43%), Positives = 65/106 (61%)
 Frame = +3

Query: 288 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 467
           M   W   +RGG+A+E+A   L FNVHP+ M+IG + L  +A++VY+VF      T K+ 
Sbjct: 31  MTGAWLGMYRGGIAWESA---LQFNVHPLCMVIGLVFLQGDALLVYRVFRNEAKRTTKVL 87

Query: 468 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLY 605
           H +LH  A V+  VG+   F+ H   G A+LYSLHSW GI   +L+
Sbjct: 88  HGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALF 133

>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)|
          Length = 250

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = +3

Query: 300 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 479
           W   +RGG+A+E++   L FNVHP+ M+IG I L  +A++VY+VF      T K+ H +L
Sbjct: 33  WLGLYRGGIAWESS---LQFNVHPLCMVIGMIFLQGDALLVYRVFRREAKRTTKILHGLL 89

Query: 480 HAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLY 605
           H  A ++  VG+   F +H   G A+LYSLHSW GI    LY
Sbjct: 90  HVFAFIIALVGLVAVFDYHKKKGYADLYSLHSWCGILVFVLY 131

>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)|
          Length = 251

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 46/106 (43%), Positives = 64/106 (60%)
 Frame = +3

Query: 288 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 467
           M   W   +RGG+A+E+   +L FN HP+ M+IG I L  +A++VY+VF      T K+ 
Sbjct: 30  MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGDALLVYRVFRNEAKRTTKVL 86

Query: 468 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLY 605
           H +LH  A+V+  VG+   F +H   G A+LYSLHSW GI    LY
Sbjct: 87  HGLLHIFALVIALVGLVAVFDYHRKEGYADLYSLHSWCGILVFVLY 132

>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)|
          Length = 251

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 46/106 (43%), Positives = 63/106 (59%)
 Frame = +3

Query: 288 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 467
           M   W   +RGG+A+E+   +L FN HP+ M+IG I L   A++VY+VF      T K+ 
Sbjct: 30  MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGNALLVYRVFRNEAKRTTKVL 86

Query: 468 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLY 605
           H +LH  A+V+  VG+   F +H   G A+LYSLHSW GI    LY
Sbjct: 87  HGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLY 132

>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)|
          Length = 247

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 36/85 (42%), Positives = 56/85 (65%)
 Frame = +3

Query: 351 LIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILHAIAIVLGAVGIYCAFK 530
           L FNVHP+ M++G + L  EA++VY+VF      + K+ H +LH +A+V+  VG+   F+
Sbjct: 48  LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRSTKILHGVLHIMALVISLVGVIAVFQ 107

Query: 531 FHNDSGIANLYSLHSWLGIGAISLY 605
           +H  +G  ++YSLHSW GI   +LY
Sbjct: 108 YHQANGYPDMYSLHSWCGIVTFTLY 132

>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)|
          Length = 266

 Score = 75.9 bits (185), Expect = 9e-14
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
 Frame = +3

Query: 288 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 467
           +V +W   F  G A+   + +  FN HP  M++G + L  EA++VY+VF       +K  
Sbjct: 38  LVTIWMSKFESGFAWNE-DPDKEFNYHPTFMIMGMVFLFGEALLVYRVFRNERKKFSKTL 96

Query: 468 HLILHAIAIVLGAVGIYCAFKFH--------NDSGIANLYSLHSWLGIGAISLY 605
           H+ILH+  +V   + +   F +H        N + I NL SLHSW+G+  + LY
Sbjct: 97  HVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSWIGLSVVILY 150

>C56D1_HUMAN (Q8N8Q1) Cytochrome b561 domain-containing protein 1|
          Length = 229

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +3

Query: 354 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILH----AIAIVLGAVGIYC 521
           +F+ HPV M + F +  +EAI+++     L    ++   + LH     +AI+  A+G+  
Sbjct: 51  LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGF 110

Query: 522 AFKFHNDSGIANLYSLHSWLG 584
                  S + +L S HSW+G
Sbjct: 111 IISSRTRSELPHLVSWHSWVG 131

>C56D2_HUMAN (O14569) Cytochrome b561 domain-containing protein 2 (Putative|
           tumor suppressor protein 101F6)
          Length = 222

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +3

Query: 354 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAK----LTHLILHAIAIVLGAVGIYC 521
           +F+ HPVLM + F  L +EA++V+     L H  ++      H +L  +A++   +G+  
Sbjct: 44  LFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARCHWVLQLLALLCALLGLGL 103

Query: 522 AFKFHNDSGIANLYSLHSWLGIGAI 596
                   G A+L + H   G+ A+
Sbjct: 104 VILHKEQLGKAHLVTRHGQAGLLAV 128

>C56D2_RAT (Q641Y1) Cytochrome b561 domain-containing protein 2|
          Length = 222

 Score = 36.6 bits (83), Expect = 0.058
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = +3

Query: 354 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 521
           +F+ HPVLM + F  L +EA++++     +   L+       H +L  +A++   +G+  
Sbjct: 44  LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGLGL 103

Query: 522 AFKFHNDSGIANLYSLHSWLGIGAI 596
                   G A+L + H   G+ A+
Sbjct: 104 VILHKEQLGKAHLATRHGQAGLLAV 128

>C56D2_MOUSE (Q9WUE3) Cytochrome b561 domain-containing protein 2 (Putative|
           tumor suppressor protein 101F6)
          Length = 222

 Score = 36.6 bits (83), Expect = 0.058
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = +3

Query: 354 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 521
           +F+ HPVLM + F  L +EA++++     +   L+       H +L  +A++   +G+  
Sbjct: 44  LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGLGL 103

Query: 522 AFKFHNDSGIANLYSLHSWLGIGAI 596
                   G A+L + H   G+ A+
Sbjct: 104 VILHKEQLGKAHLTTRHGQAGLLAV 128

>C56D2_BOVIN (Q5E965) Cytochrome b561 domain-containing protein 2|
          Length = 222

 Score = 36.6 bits (83), Expect = 0.058
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = +3

Query: 354 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 521
           +F+ HPVLM + F  L +EA++V+     +   L+       H +L  +A++   +G+  
Sbjct: 44  LFSWHPVLMSLAFSFLMTEALLVFSPESSLLRSLSRKGRARCHWVLQLLALLCALLGLGL 103

Query: 522 AFKFHNDSGIANLYSLHSWLGIGAI 596
                   G A+L + H   G+ A+
Sbjct: 104 VILHKEQLGKAHLATWHGRAGLLAV 128

>5HT2C_RAT (P08909) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin|
           receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C)
          Length = 460

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
 Frame = +3

Query: 132 GRECAAPAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYXXXXXXXXXXXMVLVWCIH 311
           G E  AP P  DQ+ ++K+++   RG M      K                  +++WC  
Sbjct: 275 GEEENAPNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPF 329

Query: 312 F----RGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVF 434
           F       L  +A N+ L+  +  V + IG++  G    +VY +F
Sbjct: 330 FITNILSVLCGKACNQKLMEKLLNVFVWIGYVCSGINP-LVYTLF 373

>RPOP_MAIZE (P10581) Probable DNA-directed RNA polymerase (EC 2.7.7.6) (S-2 DNA|
            ORF1)
          Length = 1098

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -2

Query: 476  DQVGQLGSIVVQSRKYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRL 333
            D + ++G  ++   K+L DH    A  NE  Q+K+   VE+  ++ R+
Sbjct: 933  DSIFRMGHPLIIINKFLFDHILIPAIQNEHPQNKHLFSVEERSMLDRM 980

>APOB_HUMAN (P04114) Apolipoprotein B-100 precursor (Apo B-100) [Contains:|
           Apolipoprotein B-48 (Apo B-48)]
          Length = 4563

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 434 KYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRLEGEAAAEVDA 303
           K LVDH+G+T +D       N + +  E L+  L+ +   E  A
Sbjct: 732 KVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARA 775


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,730,028
Number of Sequences: 219361
Number of extensions: 1137322
Number of successful extensions: 3797
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3791
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)