ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart11d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506270.1| PREDICTED Oryza sativa (japonica cultivar-group... 331 1e-87
2ref|XM_477569.1| Oryza sativa (japonica cultivar-group), mRNA 331 1e-87
3dbj|AK073103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 1e-87
4dbj|AK060569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 1e-87
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
6dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
7dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
8gb|AY106000.1| Zea mays PCO136000 mRNA sequence 98 4e-17
9ref|XM_546930.2| PREDICTED: Canis familiaris similar to Nuclear ... 44 0.50
10gb|AE012353.1| Xanthomonas campestris pv. campestris str. ATCC 3... 44 0.50
11gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 44 0.50
12gb|AC132271.5| Mus musculus BAC clone RP24-338E23 from 5, comple... 44 0.50
13gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, comple... 42 2.0
14dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 42 2.0
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
17dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 2.0
18gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 42 2.0
19ref|NM_102277.3| Arabidopsis thaliana unknown protein AT1G24310 ... 40 7.8
20gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
21gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
22gb|AY442363.1| Vinciguerria sp. JAL-2003 recombination-activatin... 40 7.8
23emb|AJ249196.1|RLE249196 Rhizobium leguminosarum bv. viciae dadR... 40 7.8
24gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosom... 40 7.8
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.8
26gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome... 40 7.8
27emb|AL954711.3| Human DNA sequence from clone RP11-666A1 on chro... 40 7.8
28emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chr... 40 7.8
29emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chr... 40 7.8
30ref|XM_777961.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.8
31gb|AE008793.1| Salmonella typhimurium LT2, section 97 of 220 of ... 40 7.8
32gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, compl... 40 7.8
33gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partia... 40 7.8
34gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, com... 40 7.8
35dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial ... 40 7.8
36gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-13... 40 7.8
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
38gb|AF222689.1|AF222689 Homo sapiens protein arginine N-methyltra... 40 7.8
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
40emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
41gb|AC137783.3| Homo sapiens chromosome 16 clone RP11-124P23, com... 40 7.8
42emb|BX815880.1|CNS0ABMV Arabidopsis thaliana Full-length cDNA Co... 40 7.8
43emb|BX813606.1|CNS0ACBE Arabidopsis thaliana Full-length cDNA Co... 40 7.8
44emb|BX814373.1|CNS0ABZS Arabidopsis thaliana Full-length cDNA Co... 40 7.8
45gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence 40 7.8
46gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial ... 40 7.8
47gb|AC109333.28| Homo sapiens chromosome 17, clone RP11-115H24, c... 40 7.8
48gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA ... 40 7.8
49gb|BT004977.1| Arabidopsis thaliana clone U50524 unknown protein... 40 7.8
50gb|AF285084.1|AF285084S1 Salmonella typhimurium LT2 colanic acid... 40 7.8
51dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.8
52gb|AC128674.3| Homo sapiens BAC clone RP11-1390M18 from UL, comp... 40 7.8
53dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
54dbj|AK117665.1| Arabidopsis thaliana At1g24310 mRNA for unknown ... 40 7.8
55dbj|AK111389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
56gb|AF069776.1|AF069776 Xanthomonas phage phi-Xv adsorption prote... 40 7.8
57gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
58dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co... 40 7.8
59dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome 40 7.8
60dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.8
61gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rR... 40 7.8
62gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA ... 40 7.8
63emb|AL670941.11| Mouse DNA sequence from clone RP23-291M22 on ch... 40 7.8 
>ref|XM_506270.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.107 mRNA
          Length = 1733

 Score =  331 bits (167), Expect = 1e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 234 tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
           ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 318 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 377

                                                                       
Query: 294 caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
           ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 378 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 437

                                                                       
Query: 354 acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcaggct 413
           |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 438 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccaggct 497

                                                                       
Query: 414 atggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttttaggcatctgttg 473
           || |||||||||||||||||||| || || |||||||| |||||||| ||||||||||||
Sbjct: 498 atcgtggatgcgtacaaggaggatcctggaaaccctcgttatgctttcaggcatctgttg 557

                                                                       
Query: 474 tttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctgatatcatgtgg 533
           ||||| || ||||| ||||||||| |||||||||| || || ||||||||||||||||||
Sbjct: 558 tttagtgttacagagccttcacaacgggtgaagccagttgcggcatctgatatcatgtgg 617

                                              
Query: 534 gcagaagcgatgggtaagcttgagtgcatggatag 568
           |||||||| ||||| ||||||||| ||||||||||
Sbjct: 618 gcagaagctatggggaagcttgagggcatggatag 652



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 57  ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
           ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 141 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 200

                                     
Query: 117 gcgccgtcgtccactccggccttcgg 142
           |||||||||||||| ||| |||||||
Sbjct: 201 gcgccgtcgtccaccccgtccttcgg 226



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
           |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 96  ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 155

                                                             
Query: 126 tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
            |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 156 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 205
to top
>ref|XM_477569.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1662

 Score =  331 bits (167), Expect = 1e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 234 tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
           ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 352 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 411

                                                                       
Query: 294 caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
           ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 412 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 471

                                                                       
Query: 354 acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcaggct 413
           |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 472 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccaggct 531

                                                                       
Query: 414 atggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttttaggcatctgttg 473
           || |||||||||||||||||||| || || |||||||| |||||||| ||||||||||||
Sbjct: 532 atcgtggatgcgtacaaggaggatcctggaaaccctcgttatgctttcaggcatctgttg 591

                                                                       
Query: 474 tttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctgatatcatgtgg 533
           ||||| || ||||| ||||||||| |||||||||| || || ||||||||||||||||||
Sbjct: 592 tttagtgttacagagccttcacaacgggtgaagccagttgcggcatctgatatcatgtgg 651

                                              
Query: 534 gcagaagcgatgggtaagcttgagtgcatggatag 568
           |||||||| ||||| ||||||||| ||||||||||
Sbjct: 652 gcagaagctatggggaagcttgagggcatggatag 686



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 57  ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
           ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 175 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 234

                                     
Query: 117 gcgccgtcgtccactccggccttcgg 142
           |||||||||||||| ||| |||||||
Sbjct: 235 gcgccgtcgtccaccccgtccttcgg 260



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
           |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 130 ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 189

                                                             
Query: 126 tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
            |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 190 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 239
to top
>dbj|AK073103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024G02, full
           insert sequence
          Length = 1662

 Score =  331 bits (167), Expect = 1e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 234 tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
           ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 352 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 411

                                                                       
Query: 294 caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
           ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 412 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 471

                                                                       
Query: 354 acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcaggct 413
           |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 472 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccaggct 531

                                                                       
Query: 414 atggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttttaggcatctgttg 473
           || |||||||||||||||||||| || || |||||||| |||||||| ||||||||||||
Sbjct: 532 atcgtggatgcgtacaaggaggatcctggaaaccctcgttatgctttcaggcatctgttg 591

                                                                       
Query: 474 tttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctgatatcatgtgg 533
           ||||| || ||||| ||||||||| |||||||||| || || ||||||||||||||||||
Sbjct: 592 tttagtgttacagagccttcacaacgggtgaagccagttgcggcatctgatatcatgtgg 651

                                              
Query: 534 gcagaagcgatgggtaagcttgagtgcatggatag 568
           |||||||| ||||| ||||||||| ||||||||||
Sbjct: 652 gcagaagctatggggaagcttgagggcatggatag 686



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 57  ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
           ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 175 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 234

                                     
Query: 117 gcgccgtcgtccactccggccttcgg 142
           |||||||||||||| ||| |||||||
Sbjct: 235 gcgccgtcgtccaccccgtccttcgg 260



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
           |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 130 ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 189

                                                             
Query: 126 tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
            |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 190 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 239
to top
>dbj|AK060569.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C01, full
           insert sequence
          Length = 1733

 Score =  331 bits (167), Expect = 1e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 234 tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
           ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 318 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 377

                                                                       
Query: 294 caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
           ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 378 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 437

                                                                       
Query: 354 acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcaggct 413
           |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 438 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccaggct 497

                                                                       
Query: 414 atggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttttaggcatctgttg 473
           || |||||||||||||||||||| || || |||||||| |||||||| ||||||||||||
Sbjct: 498 atcgtggatgcgtacaaggaggatcctggaaaccctcgttatgctttcaggcatctgttg 557

                                                                       
Query: 474 tttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctgatatcatgtgg 533
           ||||| || ||||| ||||||||| |||||||||| || || ||||||||||||||||||
Sbjct: 558 tttagtgttacagagccttcacaacgggtgaagccagttgcggcatctgatatcatgtgg 617

                                              
Query: 534 gcagaagcgatgggtaagcttgagtgcatggatag 568
           |||||||| ||||| ||||||||| ||||||||||
Sbjct: 618 gcagaagctatggggaagcttgagggcatggatag 652



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 57  ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
           ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 141 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 200

                                     
Query: 117 gcgccgtcgtccactccggccttcgg 142
           |||||||||||||| ||| |||||||
Sbjct: 201 gcgccgtcgtccaccccgtccttcgg 226



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 66  ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
           |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 96  ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 155

                                                             
Query: 126 tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
            |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 156 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 205
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  147 bits (74), Expect = 5e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                            
Query: 234      tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
                ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 11560508 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 11560567

                                                                            
Query: 294      caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
                ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 11560568 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 11560627

                                                                          
Query: 354      acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcagg 411
                |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||
Sbjct: 11560628 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccagg 11560685



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                            
Query: 57       ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
                ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 11560331 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 11560390

                                          
Query: 117      gcgccgtcgtccactccggccttcgg 142
                |||||||||||||| ||| |||||||
Sbjct: 11560391 gcgccgtcgtccaccccgtccttcgg 11560416



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                            
Query: 464      gcatctgttgtttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctga 523
                ||||||||||||||| || ||||| ||||||||| |||||||||| || || ||||||||
Sbjct: 11560925 gcatctgttgtttagtgttacagagccttcacaacgggtgaagccagttgcggcatctga 11560984

                 
Query: 524      t 524
                |
Sbjct: 11560985 t 11560985



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 525      atcatgtgggcagaagcgatgggtaagcttgagtgcatggatag 568
                ||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 11561084 atcatgtgggcagaagctatggggaagcttgagggcatggatag 11561127



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 409      aggctatggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttt 460
                ||||||| |||||||||||||||||||| || || |||||||| ||||||||
Sbjct: 11560771 aggctatcgtggatgcgtacaaggaggatcctggaaaccctcgttatgcttt 11560822



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                            
Query: 66       ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
                |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 11560286 ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 11560345

                                                                  
Query: 126      tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
                 |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 11560346 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 11560395



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 251     agcgccgccgtcgccatcaccatc 274
               |||||||||||||||||| |||||
Sbjct: 2974741 agcgccgccgtcgccatcgccatc 2974764
to top
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score =  147 bits (74), Expect = 5e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                          
Query: 234    tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
              ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 124166 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 124225

                                                                          
Query: 294    caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
              ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 124226 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 124285

                                                                        
Query: 354    acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcagg 411
              |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||
Sbjct: 124286 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccagg 124343



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                          
Query: 57     ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
              ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 123989 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 124048

                                        
Query: 117    gcgccgtcgtccactccggccttcgg 142
              |||||||||||||| ||| |||||||
Sbjct: 124049 gcgccgtcgtccaccccgtccttcgg 124074



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                          
Query: 464    gcatctgttgtttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctga 523
              ||||||||||||||| || ||||| ||||||||| |||||||||| || || ||||||||
Sbjct: 124583 gcatctgttgtttagtgttacagagccttcacaacgggtgaagccagttgcggcatctga 124642

               
Query: 524    t 524
              |
Sbjct: 124643 t 124643



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 525    atcatgtgggcagaagcgatgggtaagcttgagtgcatggatag 568
              ||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 124742 atcatgtgggcagaagctatggggaagcttgagggcatggatag 124785



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 409    aggctatggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttt 460
              ||||||| |||||||||||||||||||| || || |||||||| ||||||||
Sbjct: 124429 aggctatcgtggatgcgtacaaggaggatcctggaaaccctcgttatgcttt 124480



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                          
Query: 66     ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
              |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 123944 ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 124003

                                                                
Query: 126    tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
               |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 124004 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 124053
to top
>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:B1272H04
          Length = 87113

 Score =  147 bits (74), Expect = 5e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                        
Query: 234  tcgaccccggcgttcggagcgccgccgtcgccatcaccatcaccctttgggttccagcag 293
            ||||||||||||||||| | | |||||||||| || ||||| || |||||||||||||||
Sbjct: 5880 tcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcag 5939

                                                                        
Query: 294  caggtgaatccatccccttcgccttttggtttcggcggcggggctggcgggcagattacc 353
            ||| |||  || ||||| ||||| || || |||| ||| ||||  ||||||||||| |||
Sbjct: 5940 cagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcacc 5999

                                                                      
Query: 354  acccagatggccccagttgcgccgctgccactctcgccctccgaccgcgacattcagg 411
            |||||||||||||| || |||||||| || ||||||||||||||||| ||||| ||||
Sbjct: 6000 acccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccagg 6057



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                        
Query: 57   ttcggaactccctccactacccctgccttcggcaccccttcctccacgccggcatttggc 116
            ||||| || |||||||| | ||| ||||||||||||||||||||||||||||| || |||
Sbjct: 5703 ttcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggc 5762

                                      
Query: 117  gcgccgtcgtccactccggccttcgg 142
            |||||||||||||| ||| |||||||
Sbjct: 5763 gcgccgtcgtccaccccgtccttcgg 5788



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 464  gcatctgttgtttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctga 523
            ||||||||||||||| || ||||| ||||||||| |||||||||| || || ||||||||
Sbjct: 6297 gcatctgttgtttagtgttacagagccttcacaacgggtgaagccagttgcggcatctga 6356

             
Query: 524  t 524
            |
Sbjct: 6357 t 6357



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 525  atcatgtgggcagaagcgatgggtaagcttgagtgcatggatag 568
            ||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 6456 atcatgtgggcagaagctatggggaagcttgagggcatggatag 6499



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 409  aggctatggtggatgcgtacaaggaggaaccaggcaaccctcgctatgcttt 460
            ||||||| |||||||||||||||||||| || || |||||||| ||||||||
Sbjct: 6143 aggctatcgtggatgcgtacaaggaggatcctggaaaccctcgttatgcttt 6194



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                        
Query: 66   ccctccactacccctgccttcggcaccccttcctccacgccggcatttggcgcgccgtcg 125
            |||||||| ||||| || |||||| ||||||||||||| || ||||| ||| |||| || 
Sbjct: 5658 ccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctcc 5717

                                                              
Query: 126  tccactccggccttcggtgtcccttcgtccaccccagccttcggcgcgcc 175
             |||  || ||||||||   |||||| ||||| || || |||||||||||
Sbjct: 5718 accaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgcc 5767
to top
>gb|AY106000.1| Zea mays PCO136000 mRNA sequence
          Length = 868

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                       
Query: 464 gcatctgttgtttagcgtgacagatccttcacaaagggtgaagcctgtagcagcatctga 523
           |||| ||||||| ||||||||||| ||||| |||||||||||||| || || || || ||
Sbjct: 25  gcatttgttgttcagcgtgacagaaccttcccaaagggtgaagccagttgctgcctcaga 84

                                                        
Query: 524 tatcatgtgggcagaagcgatgggtaagcttgagtgcatggatag 568
           ||| |||||||||||||| ||||| || ||||| |||||||||||
Sbjct: 85  tattatgtgggcagaagcaatggggaaacttgaatgcatggatag 129
to top
>ref|XM_546930.2| PREDICTED: Canis familiaris similar to Nuclear envelope pore membrane
            protein POM 121 (Pore membrane protein of 121 kDa)
            (LOC489812), mRNA
          Length = 2673

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 70   ccactacccctgccttcggcacccct 95
            ||||| ||||||||||||||||||||
Sbjct: 2054 ccactgcccctgccttcggcacccct 2079
to top
>gb|AE012353.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 261
            of 460 of the complete genome
          Length = 10219

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 250  gagcgccgccgtcgccatcacc 271
            ||||||||||||||||||||||
Sbjct: 4652 gagcgccgccgtcgccatcacc 4673
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 250     gagcgccgccgtcgccatcacc 271
               ||||||||||||||||||||||
Sbjct: 2029784 gagcgccgccgtcgccatcacc 2029763
to top
>gb|AC132271.5| Mus musculus BAC clone RP24-338E23 from 5, complete sequence
          Length = 173029

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 273    tcaccctttgggttccagcagc 294
              ||||||||||||||||||||||
Sbjct: 103499 tcaccctttgggttccagcagc 103478
to top
>gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, complete sequence
          Length = 209411

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     cccccaactctccccctctct 42
              |||||||||||||||||||||
Sbjct: 123548 cccccaactctccccctctct 123568
to top
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 170     cgcgccctcctctacgtcggc 190
               |||||||||||||||||||||
Sbjct: 1814670 cgcgccctcctctacgtcggc 1814690
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 252     gcgccgccgtcgccatcacca 272
               |||||||||||||||||||||
Sbjct: 8877529 gcgccgccgtcgccatcacca 8877549
to top
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 252   gcgccgccgtcgccatcacca 272
             |||||||||||||||||||||
Sbjct: 82547 gcgccgccgtcgccatcacca 82567
to top
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a,
            complete sequence
          Length = 28124

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 71   cactacccctgccttcggcaccccttcct 99
            ||||| |||||||||||||||||| ||||
Sbjct: 2293 cactagccctgccttcggcaccccctcct 2321
to top
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 170     cgcgccctcctctacgtcggc 190
               |||||||||||||||||||||
Sbjct: 2502358 cgcgccctcctctacgtcggc 2502338
to top
>ref|NM_102277.3| Arabidopsis thaliana unknown protein AT1G24310 mRNA, complete cds
          Length = 1491

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 499 gggtgaagcctgtagcagcatctgatatcatgtgggcaga 538
           |||||||||||| ||| | ||| ||||| |||||||||||
Sbjct: 610 gggtgaagcctgcagctgtatcagatataatgtgggcaga 649
to top
>gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0064J09 map near 50283S, complete sequence
          Length = 111122

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   tccccctctcttcgggacgc 51
            ||||||||||||||||||||
Sbjct: 8092 tccccctctcttcgggacgc 8111
to top
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11
              map near 50283S, complete sequence
          Length = 148306

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     tccccctctcttcgggacgc 51
              ||||||||||||||||||||
Sbjct: 144190 tccccctctcttcgggacgc 144209
to top
>gb|AY442363.1| Vinciguerria sp. JAL-2003 recombination-activating gene 1 (RAG1)
           gene, partial cds
          Length = 1440

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 gcggcggggctggcgggcag 347
           ||||||||||||||||||||
Sbjct: 966 gcggcggggctggcgggcag 985
to top
>emb|AJ249196.1|RLE249196 Rhizobium leguminosarum bv. viciae dadR, dadX, dadA genes
          Length = 3610

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  ccggcgttcggagcgccgcc 259
            ||||||||||||||||||||
Sbjct: 1888 ccggcgttcggagcgccgcc 1869
to top
>gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosome 6, complete
            sequence
          Length = 180102

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ccgccgtcgccatcaccatc 274
            ||||||||||||||||||||
Sbjct: 2575 ccgccgtcgccatcaccatc 2556
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 258     ccgtcgccatcaccatcacc 277
               ||||||||||||||||||||
Sbjct: 2792409 ccgtcgccatcaccatcacc 2792428
to top
>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence
          Length = 234330

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    ccgccgtcgccatcaccatc 274
              ||||||||||||||||||||
Sbjct: 117382 ccgccgtcgccatcaccatc 117363
to top
>emb|AL954711.3| Human DNA sequence from clone RP11-666A1 on chromosome 1 Contains two
             novel pseudogenes, two novel genes, a profilin 1 (PFN1)
             pseudogene, a peptidylprolyl isomerase A (cyclophilin A)
             (PPIA) pseudogene and three CpG islands, complete sequence
          Length = 172789

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ccttcggcaccccttcctccacgc 105
             |||||| |||||||||||||||||
Sbjct: 21386 ccttcgccaccccttcctccacgc 21363
to top
>emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chromosome 1 Contains a novel
              gene, the 5' end of a novel gene a profilin 1 (PFN1)
              pseudogene and a CpG island, complete sequence
          Length = 170669

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     ccttcggcaccccttcctccacgc 105
              |||||| |||||||||||||||||
Sbjct: 121731 ccttcgccaccccttcctccacgc 121708
to top
>emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chromosome 6 Contains the
             TRIP7 gene for thyroid hormone receptor interactor 7, a
             ribosomal protein S18 (RPS18) pseudogene and part of a
             novel gene, complete sequence
          Length = 152086

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 65    tccctccactacccctgccttcggcacc 92
             |||| |||||||||||||||| ||||||
Sbjct: 50724 tcccaccactacccctgcctttggcacc 50697
to top
>ref|XM_777961.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11212-PA
           (LOC577748), mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 254 gccgccgtcgccatcaccatcacc 277
           ||||||||| ||||||||||||||
Sbjct: 139 gccgccgtctccatcaccatcacc 162
to top
>gb|AE008793.1| Salmonella typhimurium LT2, section 97 of 220 of the complete genome
          Length = 20148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   ccccagttgcgccgctgcca 383
             ||||||||||||||||||||
Sbjct: 14168 ccccagttgcgccgctgcca 14187
to top
>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence
          Length = 209844

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    ccaccccagccttcggcgcg 173
              ||||||||||||||||||||
Sbjct: 106620 ccaccccagccttcggcgcg 106601
to top
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1409

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   cactacccctgccttcggcacccc 94
            ||||| ||||||||||||||||||
Sbjct: 1395 cactagccctgccttcggcacccc 1372
to top
>gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, complete sequence
          Length = 95648

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   accacccagatggccccagt 370
             ||||||||||||||||||||
Sbjct: 52056 accacccagatggccccagt 52037
to top
>dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial sequence, clone:
           G32
          Length = 960

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 71  cactacccctgccttcggcacccc 94
           ||||| ||||||||||||||||||
Sbjct: 951 cactagccctgccttcggcacccc 928
to top
>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence
          Length = 181602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   accacccagatggccccagt 370
             ||||||||||||||||||||
Sbjct: 10073 accacccagatggccccagt 10054
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      tccccctctcttcgggacgc 51
               ||||||||||||||||||||
Sbjct: 8091668 tccccctctcttcgggacgc 8091687
to top
>gb|AF222689.1|AF222689 Homo sapiens protein arginine N-methyltransferase 1 (HRMT1L2) gene,
            complete cds, alternatively spliced
          Length = 15382

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  ccaccccagccttcggcgcg 173
            ||||||||||||||||||||
Sbjct: 6248 ccaccccagccttcggcgcg 6229
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       tccccctctcttcgggacgc 51
                ||||||||||||||||||||
Sbjct: 14019684 tccccctctcttcgggacgc 14019703



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       tccccctctcttcgggacgc 51
                ||||||||||||||||||||
Sbjct: 14011353 tccccctctcttcgggacgc 14011372
to top
>emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0045P24,
             complete sequence
          Length = 124420

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tccccctctcttcgggacgc 51
             ||||||||||||||||||||
Sbjct: 25200 tccccctctcttcgggacgc 25219
to top
>gb|AC137783.3| Homo sapiens chromosome 16 clone RP11-124P23, complete sequence
          Length = 198742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     ccttcggcaccccttcctccacgc 105
              |||||| |||||||||||||||||
Sbjct: 156930 ccttcgccaccccttcctccacgc 156953
to top
>emb|BX815880.1|CNS0ABMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH14ZG09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1468

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 499 gggtgaagcctgtagcagcatctgatatcatgtgggcaga 538
           |||||||||||| ||| | ||| ||||| |||||||||||
Sbjct: 603 gggtgaagcctgcagctgtatcagatataatgtgggcaga 642
to top
>emb|BX813606.1|CNS0ACBE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB27ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1328

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 499 gggtgaagcctgtagcagcatctgatatcatgtgggcaga 538
           |||||||||||| ||| | ||| ||||| |||||||||||
Sbjct: 591 gggtgaagcctgcagctgtatcagatataatgtgggcaga 630
to top
>emb|BX814373.1|CNS0ABZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZB08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1463

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 499 gggtgaagcctgtagcagcatctgatatcatgtgggcaga 538
           |||||||||||| ||| | ||| ||||| |||||||||||
Sbjct: 585 gggtgaagcctgcagctgtatcagatataatgtgggcaga 624
to top
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     cactacccctgccttcggcacccc 94
              ||||| ||||||||||||||||||
Sbjct: 135251 cactagccctgccttcggcacccc 135274



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     cactacccctgccttcggcacccc 94
              ||||| ||||||||||||||||||
Sbjct: 101513 cactagccctgccttcggcacccc 101490
to top
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence;
            chloroplast
          Length = 1452

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   cactacccctgccttcggcacccc 94
            ||||| ||||||||||||||||||
Sbjct: 1421 cactagccctgccttcggcacccc 1398
to top
>gb|AC109333.28| Homo sapiens chromosome 17, clone RP11-115H24, complete sequence
          Length = 181825

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    ccttcggcaccccttcctccacgc 105
             |||||| |||||||||||||||||
Sbjct: 53858 ccttcgccaccccttcctccacgc 53881
to top
>gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1481

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   cactacccctgccttcggcacccc 94
            ||||| ||||||||||||||||||
Sbjct: 1427 cactagccctgccttcggcacccc 1404
to top
>gb|BT004977.1| Arabidopsis thaliana clone U50524 unknown protein (At1g24310) mRNA,
           complete cds
          Length = 1165

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 499 gggtgaagcctgtagcagcatctgatatcatgtgggcaga 538
           |||||||||||| ||| | ||| ||||| |||||||||||
Sbjct: 479 gggtgaagcctgcagctgtatcagatataatgtgggcaga 518
to top
>gb|AF285084.1|AF285084S1 Salmonella typhimurium LT2 colanic acid locus, partial sequence
          Length = 12897

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  ccccagttgcgccgctgcca 383
            ||||||||||||||||||||
Sbjct: 9947 ccccagttgcgccgctgcca 9928
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 172     cgccctcctctacgtcggcg 191
               ||||||||||||||||||||
Sbjct: 5017965 cgccctcctctacgtcggcg 5017984
to top
>gb|AC128674.3| Homo sapiens BAC clone RP11-1390M18 from UL, complete sequence
          Length = 202721

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ccttcggcaccccttcctccacgc 105
             |||||| |||||||||||||||||
Sbjct: 33093 ccttcgccaccccttcctccacgc 33070
to top
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0024L18
          Length = 150128

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 251   agcgccgccgtcgccatcaccatc 274
             |||||||||||||||||| |||||
Sbjct: 20796 agcgccgccgtcgccatcgccatc 20819
to top
>dbj|AK117665.1| Arabidopsis thaliana At1g24310 mRNA for unknown protein, complete
           cds, clone: RAFL17-32-P09
          Length = 1469

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 499 gggtgaagcctgtagcagcatctgatatcatgtgggcaga 538
           |||||||||||| ||| | ||| ||||| |||||||||||
Sbjct: 619 gggtgaagcctgcagctgtatcagatataatgtgggcaga 658
to top
>dbj|AK111389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-C03, full
           insert sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 agcgccgccgtcgccatcaccatc 274
           |||||||||||||||||| |||||
Sbjct: 110 agcgccgccgtcgccatcgccatc 87
to top
>gb|AF069776.1|AF069776 Xanthomonas phage phi-Xv adsorption protein (gIII) gene, complete
           cds
          Length = 1256

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 ccgtcgccatcaccatcacc 277
           ||||||||||||||||||||
Sbjct: 774 ccgtcgccatcaccatcacc 755
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       tccccctctcttcgggacgc 51
                ||||||||||||||||||||
Sbjct: 14101686 tccccctctcttcgggacgc 14101705



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       tccccctctcttcgggacgc 51
                ||||||||||||||||||||
Sbjct: 14093355 tccccctctcttcgggacgc 14093374
to top
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     cactacccctgccttcggcacccc 94
              ||||| ||||||||||||||||||
Sbjct: 136207 cactagccctgccttcggcacccc 136230



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     cactacccctgccttcggcacccc 94
              ||||| ||||||||||||||||||
Sbjct: 102442 cactagccctgccttcggcacccc 102419
to top
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     cactacccctgccttcggcacccc 94
              ||||| ||||||||||||||||||
Sbjct: 132777 cactagccctgccttcggcacccc 132800



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    cactacccctgccttcggcacccc 94
             ||||| ||||||||||||||||||
Sbjct: 99679 cactagccctgccttcggcacccc 99656
to top
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b,
             complete sequence
          Length = 66087

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    cactacccctgccttcggcacccc 94
             ||||| ||||||||||||||||||
Sbjct: 49522 cactagccctgccttcggcacccc 49545
to top
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence
          Length = 1425

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   cactacccctgccttcggcacccc 94
            ||||| ||||||||||||||||||
Sbjct: 1404 cactagccctgccttcggcacccc 1381
to top
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence
          Length = 1425

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   cactacccctgccttcggcacccc 94
            ||||| ||||||||||||||||||
Sbjct: 1404 cactagccctgccttcggcacccc 1381
to top
>emb|AL670941.11| Mouse DNA sequence from clone RP23-291M22 on chromosome 4, complete
             sequence
          Length = 193162

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ccccaactctccccctctct 42
             ||||||||||||||||||||
Sbjct: 19767 ccccaactctccccctctct 19748


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,866,518
Number of Sequences: 3902068
Number of extensions: 3866518
Number of successful extensions: 95814
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95019
Number of HSP's gapped (non-prelim): 788
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top