ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart11a01 |
|---|---|
| Clone Library Name | barley_pub |
>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 64.7 bits (156), Expect = 2e-10 Identities = 31/72 (43%), Positives = 47/72 (65%) Frame = +2 Query: 338 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 517 W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ H +L Sbjct: 35 WLGAYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKILHGLL 91 Query: 518 HAIAIVLGAVGI 553 H +A V+ VG+ Sbjct: 92 HVLAFVIALVGL 103
>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 63.9 bits (154), Expect = 3e-10 Identities = 32/76 (42%), Positives = 47/76 (61%) Frame = +2 Query: 326 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 505 M W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ Sbjct: 31 MTGAWLGMYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKVL 87 Query: 506 HLILHAIAIVLGAVGI 553 H +LH A V+ VG+ Sbjct: 88 HGLLHVFAFVIALVGL 103
>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 63.5 bits (153), Expect = 4e-10 Identities = 32/76 (42%), Positives = 47/76 (61%) Frame = +2 Query: 326 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 505 M W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ Sbjct: 31 MTGAWLGMYRGGIAWESA---LQFNVHPLCMVIGLVFLQGDALLVYRVFRNEAKRTTKVL 87 Query: 506 HLILHAIAIVLGAVGI 553 H +LH A V+ VG+ Sbjct: 88 HGLLHVFAFVIALVGL 103
>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)| Length = 250 Score = 61.2 bits (147), Expect = 2e-09 Identities = 30/72 (41%), Positives = 46/72 (63%) Frame = +2 Query: 338 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 517 W +RGG+A+E++ L FNVHP+ M+IG I L +A++VY+VF T K+ H +L Sbjct: 33 WLGLYRGGIAWESS---LQFNVHPLCMVIGMIFLQGDALLVYRVFRREAKRTTKILHGLL 89 Query: 518 HAIAIVLGAVGI 553 H A ++ VG+ Sbjct: 90 HVFAFIIALVGL 101
>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 61.2 bits (147), Expect = 2e-09 Identities = 31/76 (40%), Positives = 47/76 (61%) Frame = +2 Query: 326 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 505 M W +RGG+A+E+ +L FN HP+ M+IG I L +A++VY+VF T K+ Sbjct: 30 MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGDALLVYRVFRNEAKRTTKVL 86 Query: 506 HLILHAIAIVLGAVGI 553 H +LH A+V+ VG+ Sbjct: 87 HGLLHIFALVIALVGL 102
>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 60.5 bits (145), Expect = 3e-09 Identities = 31/76 (40%), Positives = 46/76 (60%) Frame = +2 Query: 326 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 505 M W +RGG+A+E+ +L FN HP+ M+IG I L A++VY+VF T K+ Sbjct: 30 MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGNALLVYRVFRNEAKRTTKVL 86 Query: 506 HLILHAIAIVLGAVGI 553 H +LH A+V+ VG+ Sbjct: 87 HGLLHIFALVIALVGL 102
>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)| Length = 247 Score = 53.1 bits (126), Expect = 5e-07 Identities = 23/55 (41%), Positives = 37/55 (67%) Frame = +2 Query: 389 LIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILHAIAIVLGAVGI 553 L FNVHP+ M++G + L EA++VY+VF + K+ H +LH +A+V+ VG+ Sbjct: 48 LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRSTKILHGVLHIMALVISLVGV 102
>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)| Length = 266 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/70 (34%), Positives = 39/70 (55%) Frame = +2 Query: 326 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 505 +V +W F G A+ + + FN HP M++G + L EA++VY+VF +K Sbjct: 38 LVTIWMSKFESGFAWNE-DPDKEFNYHPTFMIMGMVFLFGEALLVYRVFRNERKKFSKTL 96 Query: 506 HLILHAIAIV 535 H+ILH+ +V Sbjct: 97 HVILHSCVLV 106
>C56D2_HUMAN (O14569) Cytochrome b561 domain-containing protein 2 (Putative| tumor suppressor protein 101F6) Length = 222 Score = 33.5 bits (75), Expect = 0.43 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Frame = +2 Query: 392 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAK----LTHLILHAIAIVLGAVGI 553 +F+ HPVLM + F L +EA++V+ L H ++ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARCHWVLQLLALLCALLGL 101
>PDLI2_RAT (Q6AYD6) PDZ and LIM domain protein 2| Length = 349 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/42 (52%), Positives = 23/42 (54%) Frame = +1 Query: 7 TSQQARSERGESKSQDSTFLSLLSAPGRAQDTRYPSLPRLSS 132 TSQQA G S DST LL +PGR PS PRLSS Sbjct: 179 TSQQA----GHSSPSDSTVRVLLHSPGR------PSSPRLSS 210
>C56D2_BOVIN (Q5E965) Cytochrome b561 domain-containing protein 2| Length = 222 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +2 Query: 392 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGI 553 +F+ HPVLM + F L +EA++V+ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFSPESSLLRSLSRKGRARCHWVLQLLALLCALLGL 101
>C56D2_RAT (Q641Y1) Cytochrome b561 domain-containing protein 2| Length = 222 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +2 Query: 392 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGI 553 +F+ HPVLM + F L +EA++++ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGL 101
>C56D2_MOUSE (Q9WUE3) Cytochrome b561 domain-containing protein 2 (Putative| tumor suppressor protein 101F6) Length = 222 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +2 Query: 392 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGI 553 +F+ HPVLM + F L +EA++++ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGL 101
>ACER_DROME (Q9VLJ6) Angiotensin-converting enzyme-related protein precursor| (EC 3.4.15.1) Length = 630 Score = 30.0 bits (66), Expect = 4.7 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -2 Query: 247 APHTSVLFLLLVLWSPVGAGAAHSLPACVLEAAR 146 A + +VL L+++LW P G +S A VLEA R Sbjct: 3 ACNITVLLLVIMLWLPHGLSMGNSCSASVLEARR 36
>THI1_PANTH (P45741) Thiaminase-1 precursor (EC 2.5.1.2) (Thiaminase I)| (Thiamine pyridinylase) Length = 409 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -2 Query: 244 PHTSVLFLLLVLWSPVGAGAAHS 176 P +L LLLV+ SP GAGAAHS Sbjct: 11 PLMVMLALLLVVVSPAGAGAAHS 33
>RPOP_MAIZE (P10581) Probable DNA-directed RNA polymerase (EC 2.7.7.6) (S-2 DNA| ORF1) Length = 1098 Score = 29.6 bits (65), Expect = 6.1 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -2 Query: 514 DQVGQLGSIVVQSRKYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRL 371 D + ++G ++ K+L DH A NE Q+K+ VE+ ++ R+ Sbjct: 933 DSIFRMGHPLIIINKFLFDHILIPAIQNEHPQNKHLFSVEERSMLDRM 980
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +1 Query: 13 QQARSERGESKSQDSTFLSLLSAPGRAQDTRYPSLP 120 QQ + + + Q + SL PG + +T+YPSLP Sbjct: 659 QQVQQQYQGQQLQQPFYSSLYPTPGASHNTQYPSLP 694
>APOB_HUMAN (P04114) Apolipoprotein B-100 precursor (Apo B-100) [Contains:| Apolipoprotein B-48 (Apo B-48)] Length = 4563 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 472 KYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRLEGEAAAEVDA 341 K LVDH+G+T +D N + + E L+ L+ + E A Sbjct: 732 KVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARA 775 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,053,779 Number of Sequences: 219361 Number of extensions: 1130189 Number of successful extensions: 4068 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4065 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
