ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart10g07 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 326 bits (836), Expect = 3e-89 Identities = 167/175 (95%), Positives = 169/175 (96%) Frame = +2 Query: 53 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIK 232 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANG AITATSTKKADL +GEIQSQIK Sbjct: 1 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIK 60 Query: 233 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 412 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS Sbjct: 61 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 120 Query: 413 IGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 IGLTANPVVNLS AFGTSALAVG DVSLDT+TKNF KYNAA SYTNQDLIASLNL Sbjct: 121 IGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNL 175
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 279 bits (714), Expect = 4e-75 Identities = 141/173 (81%), Positives = 155/173 (89%) Frame = +2 Query: 59 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 238 GPGLY IGKKA+DLLYRDYQTDHKFTLTTYT+NG AITATSTKKADLI GEIQSQIKNK Sbjct: 2 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61 Query: 239 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 418 NITVDVKANS SNV+TT+T D+L PGLK+ILSFAVPDQ+SGK ELQY HDYAG++ASIG Sbjct: 62 NITVDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIG 120 Query: 419 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 LTA+PVVNLS+ FGT ALAVG DVSLDT+T N TKYNA S++N DLIASLNL Sbjct: 121 LTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNL 173
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 233 bits (595), Expect = 2e-61 Identities = 110/173 (63%), Positives = 141/173 (81%) Frame = +2 Query: 59 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 238 GPGLY+ IGKKA+DLLY+DYQ+DHKF++TTY+ G IT++ +KK DL L ++ +Q+KNK Sbjct: 3 GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNK 62 Query: 239 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 418 N+T D+K ++ SN+ TTIT D+ AAPGLKTILSF VPDQ+SGK+E+QYLHDYAGI S+G Sbjct: 63 NVTTDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVG 121 Query: 419 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 LTANP+VN S GT+ +A+G DVS DT T +FTK NA S+TN DL+ASLNL Sbjct: 122 LTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNL 174
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 230 bits (586), Expect = 2e-60 Identities = 114/173 (65%), Positives = 138/173 (79%) Frame = +2 Query: 59 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 238 GPGLYS IGKKA+DLLYRDY +DHKFT+TTY+ G AITA+ KK +L L ++ +Q+KNK Sbjct: 3 GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNK 62 Query: 239 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 418 NIT DVK ++ SNV TTIT D+ APGLKTI SF VPDQKSGKVELQYLH+YAGIN SIG Sbjct: 63 NITTDVKVDTNSNVYTTITVDE-PAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIG 121 Query: 419 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 LTA+P+VN S G + +A+G D+S DT+T NFTK NA S+++ DLIASL L Sbjct: 122 LTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLAL 174
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 227 bits (579), Expect = 2e-59 Identities = 109/171 (63%), Positives = 138/171 (80%) Frame = +2 Query: 65 GLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNI 244 GLY+ IGKK +DLLY+DY T KF LTT + NG AITA T+K + I GE+ +QIKNK + Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKL 65 Query: 245 TVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLT 424 TVDVKANS S+++TTIT D+ PGLK+I++ VPDQ+SGK+E QYLH+YAG+NAS+GL Sbjct: 66 TVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLN 125 Query: 425 ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 +NP+VNLS AFG+ AL+VG DVS DT+T +FTKYNAA S T+ DLIASL+L Sbjct: 126 SNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHL 176
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 214 bits (545), Expect = 1e-55 Identities = 102/173 (58%), Positives = 134/173 (77%) Frame = +2 Query: 59 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 238 GPGLY+ IGKKA+DLLY+DY +D KFT++TY+ G AIT++ TKK +L LG++ +Q+KNK Sbjct: 3 GPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNK 62 Query: 239 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 418 NIT D+K ++ SN+ TTIT ++ APG+K ILSF VP+Q SGKVELQYLH+YAGI++S+G Sbjct: 63 NITTDIKVDTNSNLFTTITVNE-PAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVG 121 Query: 419 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 L ANP+VN S+ GT+ALA G D+S DT TK NAA ++ DLI SL L Sbjct: 122 LKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTL 174
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 208 bits (529), Expect = 1e-53 Identities = 102/173 (58%), Positives = 131/173 (75%) Frame = +2 Query: 59 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 238 GPGLY+ IGKKA+DLLY+D+ +D KF++TT++ G AIT+T TKK DL+LG++ Q + K Sbjct: 3 GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 62 Query: 239 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 418 NIT D+K + S + T T D+ AAPGL++I SF VPDQ SGKVELQYLH+YAGI+ S+G Sbjct: 63 NITTDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMG 121 Query: 419 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 LT NP VN S G++ LAVG DVS DT + NFTK NA S+T +DLIASL + Sbjct: 122 LTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTV 174
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 200 bits (509), Expect = 2e-51 Identities = 95/173 (54%), Positives = 127/173 (73%) Frame = +2 Query: 59 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 238 GPGLY+ IGKKA+DLLYRDYQ D KF++TTY++ G AIT T T K L LG++ +Q+KN Sbjct: 3 GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 62 Query: 239 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 418 N T DVK ++ S+++TT+T D+ APGLK I+ +PD KSGK E+QY HDYAGI+ S+G Sbjct: 63 NFTADVKVSTDSSLLTTLTFDE-PAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVG 121 Query: 419 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNL 577 TA P+VN S GT+ L++G DV+ +T + NF +NA F++T DL ASL L Sbjct: 122 FTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLIL 174
>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)| Length = 281 Score = 66.6 bits (161), Expect = 5e-11 Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 9/176 (5%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITAT--STKKADLILGEIQS--Q 226 P YS +GK+A+D+ + Y K L T T++G S +++ + G +++ + Sbjct: 2 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYK 61 Query: 227 IKNKNITVDVKANSASNVITTITADDLAAPGLKTIL--SFAVPD-QKSGKVELQYLHDYA 397 +K+ +T+ K N+ + + T + D GLK L +FA K+GK ++ Y H+ Sbjct: 62 VKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENV 121 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLI 562 ++ + + P++N SA G G + DT T N A YT +D + Sbjct: 122 KADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFV 177
>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel| Length = 283 Score = 60.8 bits (146), Expect = 3e-09 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 10/172 (5%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTDH-KFTLTTYTANGAAITATSTKKADLILG------EIQ 220 P ++ +GK AKDL + Y K TT + + S ++ G +++ Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVK 62 Query: 221 SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTIL-SFAVPD--QKSGKVELQYLHD 391 +I IT+ K N+ + + T I ++ GLK L S P ++SGKV+L + Sbjct: 63 YKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALP 122 Query: 392 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYT 547 A + A +G+T+ PV+N + F +G + D+S+ + AF ++ Sbjct: 123 TARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHS 174
>VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin) Length = 282 Score = 60.8 bits (146), Expect = 3e-09 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKAD--LILGEIQSQIK 232 P Y+ +GK A+D+ + Y K + T +A G T + T D + G ++++ K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYK 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 397 +T K N+ + + T I +D A GLK +KSGKV+ Y +Y Sbjct: 63 WGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYV 122 Query: 398 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P ++ SA G G ++ D++ TK N A Y D N Sbjct: 123 NLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) Length = 282 Score = 55.8 bits (133), Expect = 8e-08 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 232 P Y+ +GK A+D+ + Y K + T +A+G T + + D + G ++++ K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYK 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 397 +T K N+ + + T I +D A GLK +KSGK++ Y + Sbjct: 63 WAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRECL 122 Query: 398 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P ++ SA FG G ++ D++ T+ N + Y D N Sbjct: 123 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFSVGYKTGDFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) Length = 296 Score = 50.1 bits (118), Expect = 5e-06 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 9/184 (4%) Frame = +2 Query: 53 MGGPGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQS 223 M P Y+ +GK A+D+ + Y K L T + NG T++ + + + G +++ Sbjct: 14 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLET 73 Query: 224 QIK--NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLH 388 + + +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y Sbjct: 74 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 133 Query: 389 DYAGINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIA 565 ++ + + A P + + G G ++ +TS T+ N A Y + Sbjct: 134 EHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQL 193 Query: 566 SLNL 577 N+ Sbjct: 194 HTNV 197
>VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 49.3 bits (116), Expect = 8e-06 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 232 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYR 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 397 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P + + G G ++ +TS T+ N A Y + N Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel protein 1| (VDAC-1) Length = 282 Score = 49.3 bits (116), Expect = 8e-06 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 232 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 397 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHV 122 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P + + G G ++ +T+ T+ N A Y + N Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 48.9 bits (115), Expect = 1e-05 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 232 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 397 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P + + G G ++ +T+ T+ N A Y + N Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Plasmalemmal porin) (Brain-derived voltage-dependent anion channel 1) (BR1-VDAC) Length = 282 Score = 48.9 bits (115), Expect = 1e-05 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 232 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 397 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P + + G G ++ +T+ T+ N A Y + N Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) Length = 282 Score = 48.1 bits (113), Expect = 2e-05 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 9/181 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 232 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 233 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 397 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 574 + + A P + + G G ++ +T+ T+ N A Y + N Sbjct: 123 NLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182 Query: 575 L 577 + Sbjct: 183 V 183
>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin| Length = 282 Score = 38.5 bits (88), Expect = 0.014 Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 8/178 (4%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTDHK-FTLTTYTANGAAITATSTKKA-DLILGEIQSQIKN 235 P Y+ I K DLL RD+ ++ T NG + + A +I G++++ + Sbjct: 3 PPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFNVSGNQDAKGVISGKLETSFND 62 Query: 236 K--NITVDVKANSASNVITTITADDLAAPGL----KTILSFAVPDQKSGKVELQYLHDYA 397 K +T+ +A+ + + + + APGL T S A K+ + L++ H Sbjct: 63 KANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATA-AKTAILNLEHQHPLI 121 Query: 398 GINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASL 571 +AS+ + G G + D N + Y A Y L +L Sbjct: 122 HTHASVNALERKFLG-DFTVGHEGFLAGAEFGYDVQKGNVSNYAATIGYLASPLSVAL 178
>VDAC1_YEAST (P04840) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 282 Score = 37.0 bits (84), Expect = 0.040 Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 11/182 (6%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDY--QTDHKFTLTTYTANGA--AITATSTKKADLILGEIQSQI 229 P +YS I + DLL +D+ T F + T TANG ++ A K + +++++ Sbjct: 2 PPVYSDISRNINDLLNKDFYHATPAAFDVQTTTANGIKFSLKAKQPVKDGPLSTNVEAKL 61 Query: 230 KNKNITVDVKA--NSASNVITTITADDLAAPGLKT--ILSFAVPDQKSGKVELQYLHDYA 397 +K + + ++ +N+ T + +L PGLK I S KS + + + Sbjct: 62 NDKQTGLGLTQGWSNTNNLQTKLEFANL-TPGLKNELITSLTPGVAKSAVLNTTFTQPFF 120 Query: 398 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQD--LIAS 568 + L +P + G + D S + ++Y A SY +D L A+ Sbjct: 121 TARGAFDLCLKSPTFVGDLTMAHEGIVGGAEFGYDISAGSISRYAMALSYFAKDYSLGAT 180 Query: 569 LN 574 LN Sbjct: 181 LN 182
>VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 34.7 bits (78), Expect = 0.20 Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 20/148 (13%) Frame = +2 Query: 62 PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQ------- 220 PGLY+ + K D + +D+ K TT+ +I A + K ++ IQ Sbjct: 3 PGLYADLTKPTADFIKKDFAETFKLD-TTFKGKYGSIVAVTDIKDSGVVASIQPKADFTK 61 Query: 221 --SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSG-KVELQYL-- 385 ++ N N TVD N TI + PGLK + A D K E QY Sbjct: 62 YLGKVSNGNFTVD--TNGVKKGEFTI---ENIIPGLKAV---ANGDSKQNFSTEFQYKKD 113 Query: 386 --------HDYAGINASIGLTANPVVNL 445 H+ N S+ NP ++ Sbjct: 114 KIAFTLFGHNNKSFNTSLAFLINPTFSV 141
>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral geno Length = 3054 Score = 32.7 bits (73), Expect = 0.76 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 3/136 (2%) Frame = +2 Query: 71 YSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITA--TSTKKADLILGEIQSQIKNK-N 241 Y+ + K L+ + Y+ K T + G I TS KK ++ I I+N Sbjct: 1420 YNDVDSLGKLLVQKGYKVS-KIDGRTMKSGGTEIITEGTSVKKHFIVATNI---IENGVT 1475 Query: 242 ITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGL 421 I +DV + + V+ + D+ A KT++S+ QK G+V G+ IG Sbjct: 1476 IDIDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGERIQKLGRVG----RHKEGVALRIGQ 1531 Query: 422 TANPVVNLSAAFGTSA 469 T +V + T A Sbjct: 1532 TNKTLVEIPEMVATEA 1547
>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement| protein (2B-MP); Coat protein (2C-CP)] Length = 1101 Score = 31.6 bits (70), Expect = 1.7 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%) Frame = +2 Query: 347 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 472 PD +G V Y+HD+A +A++ L +NP+ L AA G A Sbjct: 953 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWPRSKQAQ 1012 Query: 473 AVGGDVSLDTSTKNFTKY 526 A G VS+ T+ +++ Y Sbjct: 1013 AQEGSVSITTNYRDWGAY 1030
>LEU2_MYCSM (Q938C9) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 422 Score = 31.6 bits (70), Expect = 1.7 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +2 Query: 311 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVG-GD 487 APG++ I++ A + L YL D A A I + A FG VG G+ Sbjct: 315 APGVRLIVTPASQQVYRDAMRLGYLQDIADAGAVITNST-----CGACFGYHMGVVGPGE 369 Query: 488 VSLDTSTKNFT 520 V L +ST+NFT Sbjct: 370 VCLTSSTRNFT 380
>COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)| Length = 515 Score = 31.6 bits (70), Expect = 1.7 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%) Frame = +2 Query: 347 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 472 PD +G V Y+HD+A +A++ L +NP+ L AA G A Sbjct: 367 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWSRSKQAQ 426 Query: 473 AVGGDVSLDTSTKNFTKY 526 A G VS+ T+ +++ Y Sbjct: 427 AQEGSVSITTNYRDWGAY 444
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 10 RSSSGAGASQLTGGNGRARPLLRDRQEGQGSALQGLPDRPQV 135 RS SG G G +G+ RP + R EGQ A + P V Sbjct: 443 RSGSGGGRRDGAGADGKPRPRRKPRVEGQAPAAAASTEHPVV 484
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -3 Query: 503 MYQATHHHQQLEH*FQTQQRG*L--QDWQSSQCLH*YQHNHVSTGA 372 ++Q HHHQQ H Q QQ+ Q Q Q H + HN+ ++ A Sbjct: 406 LHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSA 451
>Y4SI_RHISN (P55652) Probable chemoreceptor y4sI (Methyl-accepting chemotaxis| protein) Length = 756 Score = 30.4 bits (67), Expect = 3.8 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 6/143 (4%) Frame = +2 Query: 155 ANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPG----L 322 A GA I +T T +G + + + N+ + ANS V+T T L+APG Sbjct: 158 AEGAIIYSTGTNP----VGPVDAN-GSINLAIASSANSQEAVMTDFTPPTLSAPGQALYA 212 Query: 323 KTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFG--TSALAVGGDVSL 496 I+ +PD+++G + + + N V+ + FG + AL G D Sbjct: 213 VAIVHPFIPDKRNGTLLISMSTE----------MLNAVMGQAKGFGPHSEALIAGSD-GK 261 Query: 497 DTSTKNFTKYNAAFSYTNQDLIA 565 S + ++ A + N DL++ Sbjct: 262 PRSLSSISRDEDAEAVVNSDLLS 284
>FLID_BACHD (Q9K6W0) Flagellar hook-associated protein 2 (HAP2) (Filament cap| protein) (Flagellar cap protein) Length = 532 Score = 30.4 bits (67), Expect = 3.8 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 11/159 (6%) Frame = +2 Query: 92 AKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSA 271 A L DY FT+TTY ++GAA+ + T L + I + + V + NS Sbjct: 131 ADGLNIEDYH-GQTFTITTYNSSGAAVEKSFTIDTSKSLDSLFKDINSAGLGVRMSYNST 189 Query: 272 SNVI---TTITADDLAAPGLK--TILSFAVPDQKSGKVELQYLHDYAGINASIG-----L 421 + + T T AA G I+ + ++L ++ +G NA + + Sbjct: 190 YDKVIIERTETGAFNAADGSNDYQIVFGGDTGFLNDVLKLNQANEVSGTNAEVEFIDPIM 249 Query: 422 TANPVVNLSAAFGTSALAVGG-DVSLDTSTKNFTKYNAA 535 ++ P+V + T+ + VGG SL +T+ F N + Sbjct: 250 SSEPIVVSDSR--TNRVTVGGITFSLTGTTEGFETLNVS 286
>LEU2_CAMJR (Q5HS78) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 468 Score = 30.0 bits (66), Expect = 4.9 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +2 Query: 83 GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 262 GK +LY D H+ T + +G + +ADL L I + K++ ++ + Sbjct: 18 GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSVDLNACS 76 Query: 263 NSASNVITTI 292 + A ITT+ Sbjct: 77 DMAKEQITTL 86
>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)| (Repressor-activator protein 1) Length = 527 Score = 30.0 bits (66), Expect = 4.9 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 497 QATHHHQQLEH*FQTQQRG*LQDWQSSQCL---H*YQHNHVSTGAPPFQISDQEQQSSRW 327 QA HQQL+H +Q QQ+ Q Q SQ L H QH HV + E SR+ Sbjct: 122 QAQREHQQLQHAYQQQQQ-LHQLGQLSQQLAQPHLSQHEHVRDALTTDEFDTNEDLRSRY 180
>GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)| (Dextransucrase) (Sucrose 6-glucosyltransferase) Length = 1476 Score = 30.0 bits (66), Expect = 4.9 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = +2 Query: 140 LTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAA 313 +T T +G + A S E +SQI N + T V AN SNV T +T+ AA Sbjct: 26 MTLTTLSGGLVKADSN--------ESKSQISNDSNTSVVTANEESNVTTEVTSKQEAA 75
>LEU2_CAMJE (Q9PLW1) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +2 Query: 83 GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 262 GK +LY D H+ T + +G + +ADL L I + K++ ++ + Sbjct: 20 GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSMDLNACS 78 Query: 263 NSASNVITTI 292 + A ITT+ Sbjct: 79 DMAKEQITTL 88
>TBP2_HAEIN (P44971) Probable transferrin-binding protein 2 precursor| Length = 625 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 86 KKAKDLLYRDYQTDHKFTLTTYTANGA-AITATSTKKADLILGEIQSQIKNKNITVDVKA 262 K K L R + F++ NG A T T+T K DL++ SQ KN I + K Sbjct: 510 KTLKGSLKRADSQNPVFSIEANFKNGGNAFTGTATAK-DLVIDGKNSQTKNTPINITTKV 568 Query: 263 NSA 271 N A Sbjct: 569 NGA 571 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,920,161 Number of Sequences: 219361 Number of extensions: 1495144 Number of successful extensions: 5021 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5009 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
