ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09h10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197866.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0003O19.3), mRNA Length = 1190 Score = 145 bits (73), Expect = 1e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 53 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 60 Query: 113 ggaggcggcgcccccgagccggaggaagaggaggcgg 149 ||||| || | || ||||||||||| |||||||||| Sbjct: 61 ggaggaggagggcctgagccggaggaggaggaggcgg 97 Score = 141 bits (71), Expect = 1e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 189 agcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaaga 248 |||||||||||| ||||||| |||||||||| || || |||||||| |||| |||||| Sbjct: 110 agcagtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaagg 169 Query: 249 cgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 307 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 tgcacgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 228
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 141 bits (71), Expect = 1e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 189 agcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaaga 248 |||||||||||| ||||||| |||||||||| || || |||||||| |||| |||||| Sbjct: 22310648 agcagtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaagg 22310589 Query: 249 cgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 307 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22310588 tgcacgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 22310530 Score = 121 bits (61), Expect = 1e-24 Identities = 61/61 (100%) Strand = Plus / Minus Query: 53 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22311223 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 22311164 Query: 113 g 113 | Sbjct: 22311163 g 22311163 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 14730877 ggtgcggtgcggtgcggcgcg 14730857
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 141 bits (71), Expect = 1e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 189 agcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaaga 248 |||||||||||| ||||||| |||||||||| || || |||||||| |||| |||||| Sbjct: 127891 agcagtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaagg 127832 Query: 249 cgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 307 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127831 tgcacgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 127773 Score = 121 bits (61), Expect = 1e-24 Identities = 61/61 (100%) Strand = Plus / Minus Query: 53 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128466 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 128407 Query: 113 g 113 | Sbjct: 128406 g 128406
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 141 bits (71), Expect = 1e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 189 agcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaaga 248 |||||||||||| ||||||| |||||||||| || || |||||||| |||| |||||| Sbjct: 22322716 agcagtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaagg 22322657 Query: 249 cgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 307 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22322656 tgcacgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgcgccgcc 22322598 Score = 121 bits (61), Expect = 1e-24 Identities = 61/61 (100%) Strand = Plus / Minus Query: 53 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22323291 atggccatcgaccacgagtcgccgttcaaggagctccgcctcaagaacaggaggatcatg 22323232 Query: 113 g 113 | Sbjct: 22323231 g 22323231 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 14739118 ggtgcggtgcggtgcggcgcg 14739098
>ref|XM_467248.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 177 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 236 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 237 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 287
>ref|XM_506899.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1148_D05.19 mRNA Length = 1322 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 182 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 241 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 242 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 292
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 274 cgagtgcaacatgttctgcctcgactgc 301 |||||||||||||||||||||||||||| Sbjct: 28053738 cgagtgcaacatgttctgcctcgactgc 28053711 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggcgagtgcaacatgttc 289 |||||||||||||||||||| Sbjct: 25525369 gcggcgagtgcaacatgttc 25525388
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 28454899 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 28454840 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 28454839 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 28454789 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Minus Query: 142 ggaggcggagccgcaggtggcggcggc 168 ||||||| ||||||||||||||||||| Sbjct: 28699104 ggaggcgcagccgcaggtggcggcggc 28699078 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 1326778 ggtgcggtgcggtgcggcgcg 1326758 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggtgcggtgcggtgcggcgc 46 |||||||||||||||||||| Sbjct: 24166161 ggtgcggtgcggtgcggcgc 24166180
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 274 cgagtgcaacatgttctgcctcgactgc 301 |||||||||||||||||||||||||||| Sbjct: 131230 cgagtgcaacatgttctgcctcgactgc 131203
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 79020 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 78961 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 78960 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 78910
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 23740 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 23681 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 23680 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 23630
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 274 cgagtgcaacatgttctgcctcgactgc 301 |||||||||||||||||||||||||||| Sbjct: 51233 cgagtgcaacatgttctgcctcgactgc 51206
>dbj|AK104818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A01, full insert sequence Length = 1305 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 177 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 236 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 237 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 287
>dbj|AK066953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092A21, full insert sequence Length = 1321 Score = 56.0 bits (28), Expect = 7e-05 Identities = 93/114 (81%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 188 cagcagtggccgcagtggctgcgcccgctgctgtccgcgcgcttcttcgcgcaatgcaag 247 |||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||| | Sbjct: 181 cagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatgcagg 240 Query: 248 acgcactccgagtcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 301 | ||| |||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 241 atccacgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 291
>dbj|AK060208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B01, full insert sequence Length = 1538 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 274 cgagtgcaacatgttctgcctcgactgc 301 |||||||||||||||||||||||||||| Sbjct: 219 cgagtgcaacatgttctgcctcgactgc 246
>ref|XM_513895.1| PREDICTED: Pan troglodytes LOC457405 (LOC457405), mRNA Length = 1711 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 272 cccgagccggaggaagaggaggcgg 296
>ref|XM_473723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactgc 301 ||||||||||||||| ||||||||||||| Sbjct: 143 gcgagtgcaacatgtactgcctcgactgc 171
>gb|BC010450.1| Homo sapiens papillary renal cell carcinoma (translocation-associated), transcript variant 1, mRNA (cDNA clone MGC:17178 IMAGE:4179105), complete cds Length = 2075 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 273 cccgagccggaggaagaggaggcgg 297
>gb|BC004913.2| Homo sapiens papillary renal cell carcinoma (translocation-associated), transcript variant 1, mRNA (cDNA clone MGC:4723 IMAGE:3535413), complete cds Length = 2066 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 261 cccgagccggaggaagaggaggcgg 285
>ref|NM_199416.1| Homo sapiens papillary renal cell carcinoma (translocation-associated) (PRCC), transcript variant 2, mRNA Length = 2046 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 345 cccgagccggaggaagaggaggcgg 369
>ref|NM_005973.4| Homo sapiens papillary renal cell carcinoma (translocation-associated) (PRCC), transcript variant 1, mRNA Length = 2142 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 345 cccgagccggaggaagaggaggcgg 369
>emb|AL590666.8| Human DNA sequence from clone RP11-66D17 on chromosome 1 Contains the 3' end of the SH2D2A gene for SH2 domain protein 2A, the PRCC gene for papillary renal cell carcinoma (translocation-associated), the HDGF gene for hepatoma-derived growth factor (high-mobility group protein 1-like), the MRPL24 gene for mitochondrial ribosomal protein L24, the gene for CGI-41 protein (CGI-41), a novel gene (FLJ12671), a novel gene, the CRABP2 gene for cellular retinoic acid binding protein 2, a novel gene, the gene for NES nestin, the 5' end of a novel gene, the 3' end of the BCAN gene for brevican and 5 CpG islands, complete sequence Length = 160597 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 116451 cccgagccggaggaagaggaggcgg 116475
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 273 gcgagtgcaacatgttctgcctcgactgc 301 ||||||||||||||| ||||||||||||| Sbjct: 6283 gcgagtgcaacatgtactgcctcgactgc 6255
>emb|X99720.1|HSTPRCGEN H.sapiens TPRC gene Length = 2053 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 267 cccgagccggaggaagaggaggcgg 291
>emb|CR617255.1| full-length cDNA clone CS0DK008YP06 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1719 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 260 cccgagccggaggaagaggaggcgg 284
>emb|CR597848.1| full-length cDNA clone CS0DC012YL13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1836 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 87 cccgagccggaggaagaggaggcgg 111
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 273 gcgagtgcaacatgttctgcctcgactgc 301 ||||||||||||||| ||||||||||||| Sbjct: 29869531 gcgagtgcaacatgtactgcctcgactgc 29869503
>dbj|AK069139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F14, full insert sequence Length = 1474 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactgc 301 ||||||||||||||| ||||||||||||| Sbjct: 407 gcgagtgcaacatgtactgcctcgactgc 435
>dbj|AK064470.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-H04, full insert sequence Length = 685 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactgc 301 ||||||||||||||| ||||||||||||| Sbjct: 77 gcgagtgcaacatgtactgcctcgactgc 105
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 273 gcgagtgcaacatgttctgcctcgactgc 301 ||||||||||||||| ||||||||||||| Sbjct: 150457 gcgagtgcaacatgtactgcctcgactgc 150429
>emb|X97124.1|HSRNAPRCC H.sapiens mRNA for prcc protein Length = 1989 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggaggcgg 149 ||||||||||||||||||||||||| Sbjct: 245 cccgagccggaggaagaggaggcgg 269
>ref|XM_467290.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2288 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Plus Query: 142 ggaggcggagccgcaggtggcggcggc 168 ||||||| ||||||||||||||||||| Sbjct: 254 ggaggcgcagccgcaggtggcggcggc 280
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ggcggccacggcggcgggggagg 185 ||||||||||||||||||||||| Sbjct: 284119 ggcggccacggcggcgggggagg 284097
>dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0666E12 Length = 47765 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Minus Query: 142 ggaggcggagccgcaggtggcggcggc 168 ||||||| ||||||||||||||||||| Sbjct: 47117 ggaggcgcagccgcaggtggcggcggc 47091
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Minus Query: 142 ggaggcggagccgcaggtggcggcggc 168 ||||||| ||||||||||||||||||| Sbjct: 15677 ggaggcgcagccgcaggtggcggcggc 15651
>dbj|AK105636.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-D12, full insert sequence Length = 2288 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Plus Query: 142 ggaggcggagccgcaggtggcggcggc 168 ||||||| ||||||||||||||||||| Sbjct: 254 ggaggcgcagccgcaggtggcggcggc 280
>gb|L43362.1|RIC4CL2R Oryza sativa 4-coumarate:CoA ligase isoform 2 (4cl.2) mRNA, complete cds Length = 1866 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Plus Query: 142 ggaggcggagccgcaggtggcggcggc 168 ||||||| ||||||||||||||||||| Sbjct: 31 ggaggcgcagccgcaggtggcggcggc 57
>ref|XM_521601.1| PREDICTED: Pan troglodytes similar to MAX interactor 1 isoform a; MAX-interacting protein 1; MAX dimerization protein 2; Max-related transcription factor; MAX interacting protein 1 (LOC466199), mRNA Length = 1605 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 aggtggcggcggccacggcggcgggg 181 ||||||||||||||| |||||||||| Sbjct: 448 aggtggcggcggccagggcggcgggg 423
>ref|XM_324018.1| Neurospora crassa OR74A predicted protein (NCU04663.1) partial mRNA Length = 3435 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 147 cggagccgcaggtggcggcggccacggcggcggg 180 |||||||| ||||||||||||| |||||||||| Sbjct: 291 cggagccggaggtggcggcggcggcggcggcggg 258
>ref|XM_954113.1| Neurospora crassa OR74A hypothetical protein (NCU04663.1) partial mRNA Length = 3435 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 147 cggagccgcaggtggcggcggccacggcggcggg 180 |||||||| ||||||||||||| |||||||||| Sbjct: 291 cggagccggaggtggcggcggcggcggcggcggg 258
>ref|XM_985170.1| PREDICTED: Mus musculus gene model 1564, (NCBI) (Gm1564), mRNA Length = 2886 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 149 gagccgcaggtggcggcggccacggcggcg 178 |||||| |||||||||||||| |||||||| Sbjct: 451 gagccgaaggtggcggcggccgcggcggcg 480
>ref|XM_196054.6| PREDICTED: Mus musculus gene model 1564, (NCBI), transcript variant 1 (Gm1564), mRNA Length = 2886 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 149 gagccgcaggtggcggcggccacggcggcg 178 |||||| |||||||||||||| |||||||| Sbjct: 451 gagccgaaggtggcggcggccgcggcggcg 480
>emb|AL360182.15| Human DNA sequence from clone RP11-549L6 on chromosome 10 Contains the MXI1 gene for MAX interacting protein 1 (MAD2,MXD2), a ribosomal protein L21 (RPL21) pseudogene, a novel gene, the SPF30 gene for splicing factor 30, survival of motor neuron-related (SMNR) and three CpG islands, complete sequence Length = 145256 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 aggtggcggcggccacggcggcgggg 181 ||||||||||||||| |||||||||| Sbjct: 29661 aggtggcggcggccagggcggcgggg 29636
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 154 gcaggtggcggcggccacggcggcgggggaggaa 187 ||||| |||| ||||||||||||||| ||||||| Sbjct: 40986 gcaggcggcgtcggccacggcggcggaggaggaa 41019
>emb|BX294013.1|NCX4G11 Neurospora crassa DNA linkage group V Cosmid contig X4G11 Length = 119154 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 147 cggagccgcaggtggcggcggccacggcggcggg 180 |||||||| ||||||||||||| |||||||||| Sbjct: 33946 cggagccggaggtggcggcggcggcggcggcggg 33979
>gb|AF192750.1| Lampetra fluviatilis synapsin IIb (SYN II) mRNA, complete cds Length = 3062 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 aggtggcggcggccacggcggc 177 |||||||||||||||||||||| Sbjct: 262 aggtggcggcggccacggcggc 241
>gb|AF192749.1| Lampetra fluviatilis synapsin IIa (SYN II) mRNA, complete cds Length = 2198 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 aggtggcggcggccacggcggc 177 |||||||||||||||||||||| Sbjct: 262 aggtggcggcggccacggcggc 241
>dbj|AK163979.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330028K06 product:hypothetical protein, full insert sequence Length = 1329 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 149 gagccgcaggtggcggcggccacggcggcg 178 |||||| |||||||||||||| |||||||| Sbjct: 245 gagccgaaggtggcggcggccgcggcggcg 274
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcg 178 |||||||||||||||||||||| Sbjct: 25522871 ggtggcggcggccacggcggcg 25522892 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 27483754 cggcggccacggcggcgggg 27483735 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 27070144 cggcggccacggcggcgggg 27070163
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 154 gcaggtggcggcggccacggcggcgggggaggaa 187 ||||| |||| ||||||||||||||| ||||||| Sbjct: 762693 gcaggcggcgtcggccacggcggcggaggaggaa 762726 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 26169755 cggcggccacggcggcgggg 26169736
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgggggagg 185 ||||||||||||| |||||||||||| Sbjct: 4177985 ggcggcggccacgtcggcgggggagg 4177960 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aggtggcggcggccacggcg 175 |||||||||||||||||||| Sbjct: 27035738 aggtggcggcggccacggcg 27035757 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcg 178 |||||||||||||||||||| Sbjct: 25000792 tggcggcggccacggcggcg 25000811 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcgggggag 184 |||||||||||| |||||||||||||| Sbjct: 17062328 ggtggcggcggcggcggcggcgggggag 17062355
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 157 ggtggcggcggccacggcggcggggg 182 ||||||||||||||||||| |||||| Sbjct: 6043391 ggtggcggcggccacggcgacggggg 6043366 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcggggga 183 ||||||||| |||||||||||||| Sbjct: 26391163 ggcggcggctacggcggcggggga 26391140
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 157 ggtggcggcggccacggcggcggggg 182 ||||||||||||||||||| |||||| Sbjct: 47890 ggtggcggcggccacggcgacggggg 47865
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgggggagg 185 ||||||||||||| |||||||||||| Sbjct: 61607 ggcggcggccacgtcggcgggggagg 61582
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 154 gcaggtggcggcggccacggcggcgggggaggaa 187 ||||| |||| ||||||||||||||| ||||||| Sbjct: 762695 gcaggcggcgtcggccacggcggcggaggaggaa 762728 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 26483575 cggcggccacggcggcgggg 26483556
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcg 178 |||||||||||||||||||||| Sbjct: 25451047 ggtggcggcggccacggcggcg 25451068 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 27409354 cggcggccacggcggcgggg 27409335 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 26995734 cggcggccacggcggcgggg 26995753
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144084 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcg 178 |||||||||||||||||||||| Sbjct: 92253 ggtggcggcggccacggcggcg 92274
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 108757 ggtgcggtgcggtgcggcgcg 108777
>gb|AC152400.9| Mus musculus chromosome 3, clone RP23-277L18, complete sequence Length = 190913 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gaacaggaggatcatgggagg 117 ||||||||||||||||||||| Sbjct: 153520 gaacaggaggatcatgggagg 153540
>gb|AC121366.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111K12, complete sequence Length = 127901 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 36601 ggtgcggtgcggtgcggcgcg 36621
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gtggcggcggccacggcggcggggg 182 |||||||||||| |||||||||||| Sbjct: 4532444 gtggcggcggccgcggcggcggggg 4532468
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgggggag 184 ||||||||||||| ||||||||||| Sbjct: 24885 ggcggcggccacgtcggcgggggag 24861
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 149 gagccgcaggtggcggcggccacggcggc 177 |||||||||||||| ||||||| |||||| Sbjct: 74740 gagccgcaggtggccgcggccagggcggc 74712
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgggggag 184 ||||||||||||| ||||||||||| Sbjct: 57423 ggcggcggccacgtcggcgggggag 57399
>gb|AC092500.2| Homo sapiens chromosome 3 clone RP11-111P21, complete sequence Length = 182569 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cccgagccggaggaagaggag 145 ||||||||||||||||||||| Sbjct: 92715 cccgagccggaggaagaggag 92735
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04, complete sequence Length = 155372 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 56026 ggtgcggtgcggtgcggcgcg 56006
>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 223542 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 cccgagccggaggaagaggag 145 ||||||||||||||||||||| Sbjct: 190589 cccgagccggaggaagaggag 190569
>dbj|AK131737.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700042K24 product:hypothetical Phosphopantetheine attachment site containing protein, full insert sequence Length = 1727 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 agccgcaggtggcggcggccacggcggcg 178 ||||| |||||||||||||| |||||||| Sbjct: 43 agccgaaggtggcggcggccgcggcggcg 71
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcggg 180 ||||||||||||||||||||| Sbjct: 1698413 ggcggcggccacggcggcggg 1698433
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 17362704 ggtgcggtgcggtgcggcgcg 17362724 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gccggaggaagaggaggcgg 149 |||||||||||||||||||| Sbjct: 29346085 gccggaggaagaggaggcgg 29346104 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcgggggagga 186 |||||||||| |||||||||||||||| Sbjct: 28372730 tggcggcggcagcggcggcgggggagga 28372757 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 27783250 ggcggcggccacggcggcgg 27783231
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gtggcggcggccacggcggcggggg 182 |||||||||||| |||||||||||| Sbjct: 4532559 gtggcggcggccgcggcggcggggg 4532583
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgggggag 184 ||||||||||||| ||||||||||| Sbjct: 8060772 ggcggcggccacgtcggcgggggag 8060748 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 23977514 ggaggaagaggaggcggagc 23977533
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gtggcggcggccacggcggcggggg 182 |||||||||||| |||||||||||| Sbjct: 137736 gtggcggcggccgcggcggcggggg 137760
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 gcggcggccacggcggcgggggagg 185 ||||||||| ||||||||||||||| Sbjct: 1609568 gcggcggccgcggcggcgggggagg 1609592
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 8050 ggtgcggtgcggtgcggcgcg 8030
>emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chromosome X, complete sequence Length = 209800 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 cagtggccgcagtggctgcgc 211 ||||||||||||||||||||| Sbjct: 57012 cagtggccgcagtggctgcgc 57032
>dbj|AK120909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033B18, full insert sequence Length = 2177 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 215 ggtgcggtgcggtgcggcgcg 235
>dbj|AK100213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044C16, full insert sequence Length = 1469 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggtgcggtgcggtgcggcgcg 47 ||||||||||||||||||||| Sbjct: 39 ggtgcggtgcggtgcggcgcg 19
>emb|CR855782.2| Xenopus tropicalis finished cDNA, clone TGas059a07 Length = 2403 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgggggaggaac 188 ||||||||| |||||||||||||||||| Sbjct: 400 ggcggcggcggcggcggcgggggaggaac 428
>emb|AL672269.15| Mouse DNA sequence from clone RP23-57F11 on chromosome 11, complete sequence Length = 169954 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 agccgcaggtggcggcggccacggcggcg 178 ||||| |||||||||||||| |||||||| Sbjct: 91142 agccgaaggtggcggcggccgcggcggcg 91170
>ref|NM_106309.2| Arabidopsis thaliana binding AT1G76590 mRNA, complete cds Length = 1235 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactg 300 ||||||||||||||||||| || ||||| Sbjct: 309 gcgagtgcaacatgttctgtcttgactg 336
>gb|BC058676.1| Mus musculus cache domain containing 1, mRNA (cDNA clone MGC:76350 IMAGE:6834428), complete cds Length = 4981 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcccccgagccggaggaagaggag 145 |||| ||||||||||||||||||| Sbjct: 454 gcccgcgagccggaggaagaggag 477
>ref|XM_514454.1| PREDICTED: Pan troglodytes similar to SRY (sex determining region Y)-box 12; SRY (sex determining region Y)-box 22; SOX-22 protein; SRY-related HMG-box gene 22 (LOC458024), mRNA Length = 1186 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 715 gagccggaggaagaggaggaggag 738
>ref|XM_483331.1| Oryza sativa (japonica cultivar-group), mRNA Length = 267 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggcgagtgcaacatgttc 289 |||||||||||||||||||| Sbjct: 224 gcggcgagtgcaacatgttc 243
>ref|XM_475908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2085 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 159 tggcggcggccacggcggcgggggagga 186 |||||||||| |||||||||||||||| Sbjct: 750 tggcggcggcagcggcggcgggggagga 723
>ref|XM_450960.1| Oryza sativa (japonica cultivar-group), mRNA Length = 396 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 381 ggcggcggccacggcggcgg 362
>ref|NM_198037.1| Mus musculus cache domain containing 1 (Cachd1), mRNA Length = 4981 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcccccgagccggaggaagaggag 145 |||| ||||||||||||||||||| Sbjct: 454 gcccgcgagccggaggaagaggag 477
>ref|NM_204412.1| Gallus gallus achaete-scute complex-like 1(Drosophila) (ASCL1), mRNA Length = 1925 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 344 ggcggcggccacggcggcgg 325
>ref|NM_192712.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 385 ggaggaagaggaggcggagc 366
>ref|XM_478073.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcgggggag 184 |||||||||||| |||||||||||||| Sbjct: 999 ggtggcggcggcggcggcggcgggggag 1026
>ref|XM_479115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 777 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tggcggcggccacggcggcg 178 |||||||||||||||||||| Sbjct: 133 tggcggcggccacggcggcg 114
>gb|AY762116.1| Chlamydomonas reinhardtii thioredoxin-like protein mRNA, complete cds Length = 2636 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 1568 ggcggcggccacggcggcgg 1587
>gb|DQ201169.1| Picea glauca putative glycine-rich protein mRNA, complete cds Length = 471 Score = 40.1 bits (20), Expect = 4.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 133 ggaggaagaggaggcggagccgcaggtggcggcggc 168 ||||| |||||||| |||| ||| |||||||||||| Sbjct: 268 ggaggtagaggaggaggaggcgctggtggcggcggc 303
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcgggggagga 186 |||||||||| |||||||||||||||| Sbjct: 156972 tggcggcggcagcggcggcgggggagga 156999
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 73205 cggcggccacggcggcgggg 73186
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 13667 ggcggcggccacggcggcgg 13648
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcgggggagga 186 |||||||||| |||||||||||||||| Sbjct: 7654 tggcggcggcagcggcggcgggggagga 7681
>ref|XM_584957.2| PREDICTED: Bos taurus similar to SRY-box containing gene 12 (LOC508212), mRNA Length = 2806 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 673 gagccggaggaagaggaggaggag 696
>ref|XM_953429.1| Neurospora crassa OR74A hypothetical protein (NCU09823.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 886 ggcggcggccacggcggcgg 905
>ref|XM_330472.1| Neurospora crassa OR74A hypothetical protein (NCU09823.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 886 ggcggcggccacggcggcgg 905
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gccggaggaagaggaggcgg 149 |||||||||||||||||||| Sbjct: 124742 gccggaggaagaggaggcgg 124761
>ref|NM_011438.1| Mus musculus SRY-box containing gene 12 (Sox12), mRNA Length = 4199 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 1021 gagccggaggaagaggaggaggag 1044
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 343049 ggaggaagaggaggcggagc 343030
>ref|NM_006943.2| Homo sapiens SRY (sex determining region Y)-box 12 (SOX12), mRNA Length = 4645 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 1006 gagccggaggaagaggaggaggag 1029
>gb|BC068608.1| Homo sapiens cDNA clone IMAGE:5296989, with apparent retained intron Length = 2765 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggaggaagaggaggcggagccgc 155 ||||||||||||||| |||||||| Sbjct: 467 cggaggaagaggagggggagccgc 444
>gb|BC065149.1| Mus musculus CXXC finger 4, mRNA (cDNA clone IMAGE:6853043), partial cds Length = 5216 Score = 40.1 bits (20), Expect = 4.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 140 gaggaggcggagccgcaggtggcggcggccacggcggcgg 179 |||||||||||| | ||| |||||||||| ||||||||| Sbjct: 621 gaggaggcggaggaggaggcggcggcggccgcggcggcgg 582
>gb|BC053300.1| Danio rerio serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3, mRNA (cDNA clone MGC:64178 IMAGE:6797699), complete cds Length = 1333 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 1090 ggcggcggccacggcggcgg 1109
>ref|NM_199936.1| Danio rerio serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3 (serpinb1l3), mRNA Length = 1333 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 1090 ggcggcggccacggcggcgg 1109
>gb|BC067361.1| Homo sapiens SRY (sex determining region Y)-box 12, mRNA (cDNA clone MGC:71161 IMAGE:6480102), complete cds Length = 2909 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 936 gagccggaggaagaggaggaggag 959
>ref|XM_991907.1| PREDICTED: Mus musculus cache domain containing 1, transcript variant 3 (Cachd1), mRNA Length = 5321 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcccccgagccggaggaagaggag 145 |||| ||||||||||||||||||| Sbjct: 4 gcccgcgagccggaggaagaggag 27
>ref|XM_973626.1| PREDICTED: Mus musculus SRY-box containing gene 12 (Sox12), mRNA Length = 1089 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 358 gagccggaggaagaggaggaggag 381
>ref|XM_974143.1| PREDICTED: Mus musculus SRY-box containing gene 12 (Sox12), mRNA Length = 878 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 133 gagccggaggaagaggaggaggag 156
>ref|XM_542944.2| PREDICTED: Canis familiaris similar to SRY-box containing gene 12 (LOC485820), mRNA Length = 1076 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 694 gagccggaggaagaggaggaggag 717
>ref|XM_813099.1| Trypanosoma cruzi strain CL Brener 90 kDa surface protein (Tc00.1047053510021.160) partial mRNA Length = 1158 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gaggaggcggagccgcaggtggcg 163 ||||||| |||||||||||||||| Sbjct: 73 gaggaggaggagccgcaggtggcg 96
>ref|XM_723414.1| Plasmodium yoelii yoelii str. 17XNL multidomain scavenger receptor protein PbSR precursor (PY01071) partial mRNA Length = 4848 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggaggaagaggaggcggag 151 |||||||||||||||||||| Sbjct: 4071 cggaggaagaggaggcggag 4090
>emb|Z82186.1|HS49D8 Human DNA sequence from clone CITF22-49D8 on chromosome 22, complete sequence Length = 35860 Score = 40.1 bits (20), Expect = 4.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 133 ggaggaagaggaggcggagccgcaggtggcggcggc 168 ||||| ||||||||||||| || ||| ||||||||| Sbjct: 23340 ggaggcagaggaggcggaggcgaaggaggcggcggc 23375
>ref|XM_776923.1| PREDICTED: Strongylocentrotus purpuratus similar to CG33174-PD, isoform D (LOC576637), mRNA Length = 2751 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 2630 ggaggaagaggaggcggagc 2649
>emb|AL034548.25|HS1103G7 Human DNA sequence from clone RP5-1103G7 on chromosome 20p12.2-13 Contains the C20orf96 gene, the C20orf99 gene, a novel gene, the SOX12 gene for SRY (sex-determining region Y)-box 12, the C20orf98 gene for chromosome 20 open reading frame 98 (similar to mouse VMP, FLJ23329), the C20orf97 gene for a novel kinase domain-containing protein similar to phosphoprotein C8FW and rat NIPK, the gene for a novel defensin protein (DEFB32, UNQ827, KFLL827) and five CpG islands, complete sequence Length = 153170 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 81278 gagccggaggaagaggaggaggag 81301
>ref|XM_963805.1| PREDICTED: Tribolium castaneum similar to CG2150-PA (LOC657340), mRNA Length = 684 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 293 ggcggcggccacggcggcgg 312
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 aggtggcggcggccacggcggcgg 179 |||||||||||||| ||||||||| Sbjct: 338788 aggtggcggcggcctcggcggcgg 338811
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 aggtggcggcggccacggcggcgg 179 |||||||||||||| ||||||||| Sbjct: 339790 aggtggcggcggcctcggcggcgg 339813 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 aggtggcggcggccacggcggcgg 179 |||||||||||||| ||||||||| Sbjct: 334148 aggtggcggcggcctcggcggcgg 334171
>emb|AL845484.9| Mouse DNA sequence from clone RP23-336L14 on chromosome 11 Contains the 3' end of the Sez6 gene for seizure related gene 6, complete sequence Length = 47702 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgggggaggaa 187 ||||||||| ||||||||||||||||| Sbjct: 14993 ggcggcggcggcggcggcgggggaggaa 15020
>emb|AJ719315.1| Gallus gallus mRNA for hypothetical protein, clone 1f17 Length = 4119 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcggggg 182 ||||||||||| |||||||||||| Sbjct: 162 tggcggcggccgcggcggcggggg 185
>gb|BC067019.1| Mus musculus SRY-box containing gene 12, mRNA (cDNA clone MGC:90023 IMAGE:6833848), complete cds Length = 4199 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 1021 gagccggaggaagaggaggaggag 1044
>gb|AC096640.2| Homo sapiens chromosome 1 clone RP11-332J14, complete sequence Length = 167346 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggaggaagaggaggcggagccgc 155 ||||||||||||||| |||||||| Sbjct: 69934 cggaggaagaggagggggagccgc 69911
>gb|AE005693.1| Caulobacter crescentus CB15 section 19 of 359 of the complete genome Length = 10756 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 caggtggcggcggccacggcggcg 178 |||||||||||||| ||||||||| Sbjct: 5275 caggtggcggcggcgacggcggcg 5298
>ref|NM_018650.2| Homo sapiens MAP/microtubule affinity-regulating kinase 1 (MARK1), mRNA Length = 4638 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggaggaagaggaggcggagccgc 155 ||||||||||||||| |||||||| Sbjct: 424 cggaggaagaggagggggagccgc 401
>gb|L07561.2|CREDNAPL Chlamydomonas reinhardtii CPH1 (CPH1) gene, complete cds Length = 7203 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 148 ggagccgcaggtggcggcggccacggcggcgg 179 ||||||||||| ||||||||| ||||||||| Sbjct: 4812 ggagccgcaggcggcggcggcggcggcggcgg 4843
>gb|AE012451.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 359 of 460 of the complete genome Length = 10291 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 cagtggccgcagtggctgcgcccg 214 ||||||| |||||||||||||||| Sbjct: 5483 cagtggctgcagtggctgcgcccg 5506
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtggcggcggccacggcggc 177 |||||||||||||||||||| Sbjct: 4785646 gtggcggcggccacggcggc 4785665 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 3011862 ggcggcggccacggcggcgg 3011843 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 2008691 ggcggcggccacggcggcgg 2008710
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 3083 ggcggcggccacggcggcgg 3102
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete sequence Length = 20300 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 7712 ggcggcggccacggcggcgg 7731
>gb|AC090283.7| Homo sapiens chromosome 17, clone RP11-605F20, complete sequence Length = 168137 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 31648 ggcggcggccacggcggcgg 31667
>gb|AC090919.6| Homo sapiens chromosome 8, clone RP11-42C24, complete sequence Length = 184897 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaacaagacccattcttctg 20 |||||||||||||||||||| Sbjct: 46473 aaacaagacccattcttctg 46454
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 2873888 ggcggcggccacggcggcgg 2873907
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 1002873 ggcggcggccacggcggcgg 1002854
>ref|NM_001012947.1| Gallus gallus exportin 4 (XPO4), mRNA Length = 4119 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcggggg 182 ||||||||||| |||||||||||| Sbjct: 162 tggcggcggccgcggcggcggggg 185
>gb|AC008218.5| Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone BACR10L12, complete sequence Length = 178791 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 gcggcggccacggcggcgggggag 184 |||||||| ||||||||||||||| Sbjct: 39361 gcggcggcgacggcggcgggggag 39384
>gb|BT024468.1| Arabidopsis thaliana At1g76590 mRNA, complete cds Length = 738 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactg 300 ||||||||||||||||||| || ||||| Sbjct: 125 gcgagtgcaacatgttctgtcttgactg 152
>dbj|AK046646.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430218L07 product:hypothetical Cache domain/von Willebrand factor type A domain containing protein, full insert sequence Length = 4189 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcccccgagccggaggaagaggag 145 |||| ||||||||||||||||||| Sbjct: 368 gcccgcgagccggaggaagaggag 391
>gb|AC111182.20| Homo sapiens chromosome 17, clone RP11-936I5, complete sequence Length = 171898 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 184 ggaacagcagtggccgcagtggctgcgc 211 |||||||||||||| |||| |||||||| Sbjct: 58268 ggaacagcagtggcggcagcggctgcgc 58295
>dbj|AK080923.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430210E10 product:KIAA1573 PROTEIN (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 1376 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcccccgagccggaggaagaggag 145 |||| ||||||||||||||||||| Sbjct: 459 gcccgcgagccggaggaagaggag 482
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 cagtggccgcagtggctgcgcccg 214 ||||||| |||||||||||||||| Sbjct: 996603 cagtggctgcagtggctgcgcccg 996580
>gb|AC015450.5|AC015450 Arabidopsis thaliana chromosome 1 BAC F14G6 genomic sequence, complete sequence Length = 100806 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactg 300 ||||||||||||||||||| || ||||| Sbjct: 77395 gcgagtgcaacatgttctgtcttgactg 77422
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcggg 180 ||||||||||||| |||||||||| Sbjct: 178177 ggtggcggcggccgcggcggcggg 178200
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tggcggcggccacggcggcg 178 |||||||||||||||||||| Sbjct: 88361 tggcggcggccacggcggcg 88342
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tggcggcggccacggcggcg 178 |||||||||||||||||||| Sbjct: 2460775 tggcggcggccacggcggcg 2460756
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcggggga 183 |||||||||| ||||||||||||| Sbjct: 20449278 ggcggcggccgcggcggcggggga 20449255 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 17797943 ggcggcggccacggcggcgg 17797962
>gb|AC007856.7|AC007856 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone BACR05L03, complete sequence Length = 175124 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 gcggcggccacggcggcgggggag 184 |||||||| ||||||||||||||| Sbjct: 87544 gcggcggcgacggcggcgggggag 87567
>gb|AC092959.6| Homo sapiens 3 BAC RP11-649A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179714 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gtggcggcggccacggcggc 177 |||||||||||||||||||| Sbjct: 157438 gtggcggcggccacggcggc 157419
>gb|AC020553.4|AC020553 Homo sapiens BAC clone RP11-462D9 from 8, complete sequence Length = 160811 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaacaagacccattcttctg 20 |||||||||||||||||||| Sbjct: 138420 aaacaagacccattcttctg 138439
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggaggaagaggaggcggag 151 |||||||||||||||||||| Sbjct: 22532 cggaggaagaggaggcggag 22513
>gb|AY084659.1| Arabidopsis thaliana clone 114376 mRNA, complete sequence Length = 1227 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gcgagtgcaacatgttctgcctcgactg 300 ||||||||||||||||||| || ||||| Sbjct: 309 gcgagtgcaacatgttctgtcttgactg 336
>ref|XM_575262.1| PREDICTED: Rattus norvegicus similar to SOX-12 protein (SOX-22 protein) (LOC499919), mRNA Length = 654 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 382 gagccggaggaagaggaggaggag 405
>gb|AC008241.2| Leishmania major strain Friedlin chromosome 22 clone L952b, complete sequence Length = 19412 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 13078 ggaggaagaggaggcggagc 13059
>gb|AF227448.1|AF227448 Bromus tectorum clone 9 microsatellite sequence Length = 288 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 68 ggcggcggccacggcggcgg 87
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 4316422 ggcggcggccacggcggcgg 4316441
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 123918 ggaggaagaggaggcggagc 123937
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggaagaggaggcggagc 152 |||||||||||||||||||| Sbjct: 92036 ggaggaagaggaggcggagc 92055
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcggggga 183 ||||||||| |||||||||||||| Sbjct: 3202 ggcggcggctacggcggcggggga 3179
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcggggga 183 ||||||||| |||||||||||||| Sbjct: 88890 ggcggcggctacggcggcggggga 88867
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcggggga 183 |||||||||| ||||||||||||| Sbjct: 77417 ggcggcggccgcggcggcggggga 77394
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcgggggag 184 |||||||||||| |||||||||||||| Sbjct: 141739 ggtggcggcggcggcggcggcgggggag 141766
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tggcggcggccacggcggcg 178 |||||||||||||||||||| Sbjct: 41472 tggcggcggccacggcggcg 41491
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcgggggag 184 |||||||||||| |||||||||||||| Sbjct: 15454 ggtggcggcggcggcggcggcgggggag 15481
>emb|AL928568.17| Mouse DNA sequence from clone RP23-396N8 on chromosome 2, complete sequence Length = 98566 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 71106 gagccggaggaagaggaggaggag 71083
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 38587 ggcggcggccacggcggcgg 38606
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 106577 ggcggcggccacggcggcgg 106596
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggtgcggtgcggtgcggcgc 46 |||||||||||||||||||| Sbjct: 124902 ggtgcggtgcggtgcggcgc 124921
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggcgagtgcaacatgttc 289 |||||||||||||||||||| Sbjct: 156685 gcggcgagtgcaacatgttc 156704
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggcgagtgcaacatgttc 289 |||||||||||||||||||| Sbjct: 12060 gcggcgagtgcaacatgttc 12079
>dbj|AK121655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061N09, full insert sequence Length = 1339 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcggggga 183 |||||||||| ||||||||||||| Sbjct: 548 ggcggcggccgcggcggcggggga 525
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aggtggcggcggccacggcg 175 |||||||||||||||||||| Sbjct: 38979 aggtggcggcggccacggcg 38998
>emb|AJ332660.1|HSA332660 Homo sapiens genomic sequence surrounding NotI site, clone NR1-N21RS Length = 869 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 aacaagacccattcttctggttct 25 ||||||||| |||||||||||||| Sbjct: 599 aacaagaccaattcttctggttct 622
>dbj|AK100983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145A15, full insert sequence Length = 1539 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 412 ggcggcggccacggcggcgg 393
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ggcatggccatcgaccacga 69 |||||||||||||||||||| Sbjct: 4646549 ggcatggccatcgaccacga 4646568
>dbj|AK058776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B02, full insert sequence Length = 325 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 129 ggcggcggccacggcggcgg 110
>gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, region 99A7-99B5, BAC clones BACR48K01 and BACR48O23, complete sequence Length = 311043 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 gcggcggccacggcggcgggggag 184 |||||||| ||||||||||||||| Sbjct: 296665 gcggcggcgacggcggcgggggag 296688
>gb|AE003770.2| Drosophila melanogaster chromosome 3R, section 108 of 118 of the complete sequence Length = 224264 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 gcggcggccacggcggcgggggag 184 |||||||| ||||||||||||||| Sbjct: 71609 gcggcggcgacggcggcgggggag 71632
>gb|BT001847.1| Drosophila melanogaster RH56396 full insert cDNA Length = 4324 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 gcggcggccacggcggcgggggag 184 |||||||| ||||||||||||||| Sbjct: 297 gcggcggcgacggcggcgggggag 320
>emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on chromosome 2, complete sequence Length = 131255 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aacaggaggatcatgggagg 117 |||||||||||||||||||| Sbjct: 69307 aacaggaggatcatgggagg 69326
>gb|U01339.1|U01339 Gallus domesticus achaete-scute homologue mRNA, complete cds Length = 1925 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 344 ggcggcggccacggcggcgg 325
>gb|AC174767.1| Gasterosteus aculeatus chromosome VMRC28-49C03, complete sequence Length = 136807 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggaggaagaggaggcggag 151 |||||||||||||||||||| Sbjct: 57171 cggaggaagaggaggcggag 57190
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 2635206 ggcggcggccacggcggcgg 2635225
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 86093 cggcggccacggcggcgggg 86074
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 9033 cggcggccacggcggcgggg 9052
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cggcggccacggcggcgggg 181 |||||||||||||||||||| Sbjct: 59668 cggcggccacggcggcgggg 59649
>emb|AL627083.18| Mouse DNA sequence from clone RP23-378E2 on chromosome 4, complete sequence Length = 219379 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcccccgagccggaggaagaggag 145 |||| ||||||||||||||||||| Sbjct: 131914 gcccgcgagccggaggaagaggag 131937
>gb|U35612.1|HSU35612 Homo sapiens SOX22 protein (SOX22) mRNA, complete cds Length = 3131 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gagccggaggaagaggaggcggag 151 ||||||||||||||||||| |||| Sbjct: 1005 gagccggaggaagaggaggaggag 1028
>gb|AF001894.1|AF001894 Oryza sativa glycine-rich protein mRNA, complete cds Length = 943 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ggtggcggcggccacggcggcggg 180 |||||||||||| ||||||||||| Sbjct: 626 ggtggcggcggctacggcggcggg 649
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 563439 ggcggcggccacggcggcgg 563420 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gccgcaggtggcggcggcca 170 |||||||||||||||||||| Sbjct: 9376 gccgcaggtggcggcggcca 9395
>gb|L11871.1|CHKASH Gallus gallus achaete-scute homologue (ASH) mRNA, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggcggcggccacggcggcgg 179 |||||||||||||||||||| Sbjct: 193 ggcggcggccacggcggcgg 174
>dbj|AB040910.1| Homo sapiens mRNA for KIAA1477 protein, partial cds Length = 4638 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggaggaagaggaggcggagccgc 155 ||||||||||||||| |||||||| Sbjct: 424 cggaggaagaggagggggagccgc 401 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,694,155 Number of Sequences: 3902068 Number of extensions: 2694155 Number of successful extensions: 114134 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110594 Number of HSP's gapped (non-prelim): 3540 length of query: 307 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 285 effective length of database: 17,147,199,772 effective search space: 4886951935020 effective search space used: 4886951935020 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
