ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472610.1| Oryza sativa (japonica cultivar-group), predic... 331 1e-87
2dbj|AK101691.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 1e-87
3dbj|AK102407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
4gb|AY106057.1| Zea mays PCO097918 mRNA sequence 194 2e-46
5dbj|AK073064.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 8e-46
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
7emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4,... 153 7e-34
8gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genom... 46 0.11
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
11gb|AY020978.1| Oryza sativa microsatellite MRG3303 containing (T... 42 1.7
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
14dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
15dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
16dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
17gb|AF144654.1|AF144654 Glycine max isolate 48Hidatsa internal tr... 42 1.7
18gb|U60550.1|GSU60550 Glycine soja small subunit ribosomal RNA ge... 42 1.7
19gb|U60551.1|GMU60551 Glycine max small subunit ribosomal RNA gen... 42 1.7
20emb|AL929458.7| Zebrafish DNA sequence from clone CH211-248I12, ... 42 1.7
21gb|L36612.1|SOYITS Glycine max internal transcribed spacer DNA 42 1.7
22emb|AJ224109.1|GSAJ4109 Glycine soja DNA for internal transcribe... 42 1.7
23emb|AJ011337.1|GMA011337 Glycine max internal transcribed spacer... 42 1.7
24emb|AJ009791.1|GSO9791 Glycine soja 5.8S rRNA gene and internal ... 42 1.7
25emb|AJ009790.1|GSO9790 Glycine soja 5.8S rRNA gene and internal ... 42 1.7
26emb|AJ009787.1|GMA9787 Glycine max 5.8S rRNA gene and internal t... 42 1.7
27ref|NM_118896.2| Arabidopsis thaliana kinase/ ribokinase AT4G276... 40 6.9
28ref|XM_365446.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.9
29gb|AC145195.2| Danio rerio clone CH211-160M5, complete sequence 40 6.9
30emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 40 6.9
31emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, B... 40 6.9
32gb|DQ432066.1| Amycolatopsis mediterranei glnR operon, partial s... 40 6.9
33emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, compl... 40 6.9
34ref|XM_693431.1| PREDICTED: Danio rerio similar to zinc finger p... 40 6.9
35gb|AY052355.1| Arabidopsis thaliana AT4g27600/T29A15_90 mRNA, co... 40 6.9
36emb|BX827925.1|CNS0A3X7 Arabidopsis thaliana Full-length cDNA Co... 40 6.9
37emb|BX827118.1|CNS0A3LU Arabidopsis thaliana Full-length cDNA Co... 40 6.9
38gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 6.9 
>ref|XM_472610.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score =  331 bits (167), Expect = 1e-87
 Identities = 366/435 (84%), Gaps = 6/435 (1%)
 Strand = Plus / Plus

                                                                       
Query: 81  atgcagcgatacgggctgcagctccgcaagaagccggcggcctcctcgtcctcgcga--- 137
           |||||| | ||||||||||||||||||| |||||||||||| |||||||| |||||    
Sbjct: 1   atgcagaggtacgggctgcagctccgcacgaagccggcggcgtcctcgtcgtcgcgggcg 60

                                                                       
Query: 138 ---ccgctaccgccggcgcgcccactggcggccttcgccgacgacngcgatgacnacgtg 194
              ||||  |||||||| ||||| ||||||||||||||||||||  |||| ||  |||||
Sbjct: 61  ccgccgccgccgccggcccgccccctggcggccttcgccgacgatggcgacgatgacgtg 120

                                                                       
Query: 195 gaggccgacatcctccgccagtcgtcgaagaaacgcgccctcgagaaggtggaggaactg 254
           ||||||||||||||||| |||||||  ||||| ||  |||   |||||||||| || | |
Sbjct: 121 gaggccgacatcctccggcagtcgtacaagaagcgatcccagcagaaggtggaagagcag 180

                                                                       
Query: 255 cagaagaaagcgatcgaggaggatccctcggtgtttgcctatnacgaggtgtacgatgat 314
           |||||||| ||||| || ||||||||||||||||| |||||  ||||||| || || || 
Sbjct: 181 cagaagaaggcgatggaagaggatccctcggtgttcgcctacgacgaggtttatgacgac 240

                                                                       
Query: 315 ntgaaggagaaggccgctcgccccaagatacaggccaaggtcgttcgcgagtcanagtac 374
            ||||| |||||||||| | ||||||||| |||| || ||| |||||||||||| | |||
Sbjct: 241 atgaagcagaaggccgccctccccaagatgcaggacagggtagttcgcgagtcaaaatac 300

                                                                       
Query: 375 attgaagcacttaaggagaaagcagaacaacgtanacgagaacaggacatagtgtatgag 434
           ||||  ||||||||||||||||| |||||||||| |||||| ||||||||  | ||||||
Sbjct: 301 attgcggcacttaaggagaaagccgaacaacgtaaacgagagcaggacattatttatgag 360

                                                                       
Query: 435 aggaagcttcataaagagaggagcaaggaagaccacctgtttgctgacaaagacnagttt 494
           ||||||||||| ||||||||||| |||||||||||||| | || |||||||||| | |||
Sbjct: 361 aggaagcttcaaaaagagaggagtaaggaagaccacctatatggtgacaaagacaaattt 420

                          
Query: 495 gtaacatctgcctac 509
           || ||||||||||||
Sbjct: 421 gttacatctgcctac 435
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>dbj|AK101691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059K10, full
           insert sequence
          Length = 1622

 Score =  331 bits (167), Expect = 1e-87
 Identities = 366/435 (84%), Gaps = 6/435 (1%)
 Strand = Plus / Plus

                                                                       
Query: 81  atgcagcgatacgggctgcagctccgcaagaagccggcggcctcctcgtcctcgcga--- 137
           |||||| | ||||||||||||||||||| |||||||||||| |||||||| |||||    
Sbjct: 248 atgcagaggtacgggctgcagctccgcacgaagccggcggcgtcctcgtcgtcgcgggcg 307

                                                                       
Query: 138 ---ccgctaccgccggcgcgcccactggcggccttcgccgacgacngcgatgacnacgtg 194
              ||||  |||||||| ||||| ||||||||||||||||||||  |||| ||  |||||
Sbjct: 308 ccgccgccgccgccggcccgccccctggcggccttcgccgacgatggcgacgatgacgtg 367

                                                                       
Query: 195 gaggccgacatcctccgccagtcgtcgaagaaacgcgccctcgagaaggtggaggaactg 254
           ||||||||||||||||| |||||||  ||||| ||  |||   |||||||||| || | |
Sbjct: 368 gaggccgacatcctccggcagtcgtacaagaagcgatcccagcagaaggtggaagagcag 427

                                                                       
Query: 255 cagaagaaagcgatcgaggaggatccctcggtgtttgcctatnacgaggtgtacgatgat 314
           |||||||| ||||| || ||||||||||||||||| |||||  ||||||| || || || 
Sbjct: 428 cagaagaaggcgatggaagaggatccctcggtgttcgcctacgacgaggtttatgacgac 487

                                                                       
Query: 315 ntgaaggagaaggccgctcgccccaagatacaggccaaggtcgttcgcgagtcanagtac 374
            ||||| |||||||||| | ||||||||| |||| || ||| |||||||||||| | |||
Sbjct: 488 atgaagcagaaggccgccctccccaagatgcaggacagggtagttcgcgagtcaaaatac 547

                                                                       
Query: 375 attgaagcacttaaggagaaagcagaacaacgtanacgagaacaggacatagtgtatgag 434
           ||||  ||||||||||||||||| |||||||||| |||||| ||||||||  | ||||||
Sbjct: 548 attgcggcacttaaggagaaagccgaacaacgtaaacgagagcaggacattatttatgag 607

                                                                       
Query: 435 aggaagcttcataaagagaggagcaaggaagaccacctgtttgctgacaaagacnagttt 494
           ||||||||||| ||||||||||| |||||||||||||| | || |||||||||| | |||
Sbjct: 608 aggaagcttcaaaaagagaggagtaaggaagaccacctatatggtgacaaagacaaattt 667

                          
Query: 495 gtaacatctgcctac 509
           || ||||||||||||
Sbjct: 668 gttacatctgcctac 682



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 34  ctagggtttgctccgcgtcgaatcc 58
           |||||||||||||||||||||||||
Sbjct: 196 ctagggtttgctccgcgtcgaatcc 220
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>dbj|AK102407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092M02, full
           insert sequence
          Length = 1587

 Score =  323 bits (163), Expect = 3e-85
 Identities = 365/435 (83%), Gaps = 6/435 (1%)
 Strand = Plus / Plus

                                                                       
Query: 81  atgcagcgatacgggctgcagctccgcaagaagccggcggcctcctcgtcctcgcga--- 137
           |||||| | ||||||||||||||||||| | |||||||||| |||||||| |||||    
Sbjct: 259 atgcagaggtacgggctgcagctccgcacggagccggcggcgtcctcgtcgtcgcgggcg 318

                                                                       
Query: 138 ---ccgctaccgccggcgcgcccactggcggccttcgccgacgacngcgatgacnacgtg 194
              ||||  |||||||| ||||| ||||||||||||||||||||  |||| ||  |||||
Sbjct: 319 ccgccgccgccgccggcccgccccctggcggccttcgccgacgatggcgacgatgacgtg 378

                                                                       
Query: 195 gaggccgacatcctccgccagtcgtcgaagaaacgcgccctcgagaaggtggaggaactg 254
           ||||||||||||||||| |||||||  ||||| ||  |||   |||||||||| || | |
Sbjct: 379 gaggccgacatcctccggcagtcgtacaagaagcgatcccagcagaaggtggaagagcag 438

                                                                       
Query: 255 cagaagaaagcgatcgaggaggatccctcggtgtttgcctatnacgaggtgtacgatgat 314
           |||||||| ||||| || ||||||||||||||||| |||||  ||||||| || || || 
Sbjct: 439 cagaagaaggcgatggaagaggatccctcggtgttcgcctacgacgaggtttatgacgac 498

                                                                       
Query: 315 ntgaaggagaaggccgctcgccccaagatacaggccaaggtcgttcgcgagtcanagtac 374
            ||||| |||||||||| | ||||||||| |||| || ||| |||||||||||| | |||
Sbjct: 499 atgaagcagaaggccgccctccccaagatgcaggacagggtagttcgcgagtcaaaatac 558

                                                                       
Query: 375 attgaagcacttaaggagaaagcagaacaacgtanacgagaacaggacatagtgtatgag 434
           ||||  ||||||||||||||||| |||||||||| |||||| ||||||||  | ||||||
Sbjct: 559 attgcggcacttaaggagaaagccgaacaacgtaaacgagagcaggacattatttatgag 618

                                                                       
Query: 435 aggaagcttcataaagagaggagcaaggaagaccacctgtttgctgacaaagacnagttt 494
           ||||||||||| ||||||||||| |||||||||||||| | || |||||||||| | |||
Sbjct: 619 aggaagcttcaaaaagagaggagtaaggaagaccacctatatggtgacaaagacaaattt 678

                          
Query: 495 gtaacatctgcctac 509
           || ||||||||||||
Sbjct: 679 gttacatctgcctac 693



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 34  ctagggtttgctccgcgtcgaatcc 58
           |||||||||||||||||||||||||
Sbjct: 207 ctagggtttgctccgcgtcgaatcc 231
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>gb|AY106057.1| Zea mays PCO097918 mRNA sequence
          Length = 1026

 Score =  194 bits (98), Expect = 2e-46
 Identities = 286/351 (81%)
 Strand = Plus / Plus

                                                                       
Query: 159 ctggcggccttcgccgacgacngcgatgacnacgtggaggccgacatcctccgccagtcg 218
           |||||||||||||||||||||   || ||  | |||||||| || |||||||||||| ||
Sbjct: 194 ctggcggccttcgccgacgacgatgacgatgatgtggaggcagaaatcctccgccaggcg 253

                                                                       
Query: 219 tcgaagaaacgcgccctcgagaaggtggaggaactgcagaagaaagcgatcgaggaggat 278
            | ||||| ||| ||||| ||||||| ||||| | ||| ||||| || || |||||||||
Sbjct: 254 gccaagaagcgctccctccagaaggttgaggagcagcaaaagaaggccatggaggaggat 313

                                                                       
Query: 279 ccctcggtgtttgcctatnacgaggtgtacgatgatntgaaggagaaggccgctcgcccc 338
           ||||||||||  |||||  ||||| ||||||| ||  |||| |||||||  || ||||| 
Sbjct: 314 ccctcggtgtacgcctacgacgagctgtacgacgaaatgaaagagaaggaagcccgccct 373

                                                                       
Query: 339 aagatacaggccaaggtcgttcgcgagtcanagtacattgaagcacttaaggagaaagca 398
           ||||| ||||  |||||||| ||||||||| |||| |||| |  ||||||||| ||||||
Sbjct: 374 aagatgcaggataaggtcgtccgcgagtcaaagtatattgcacaacttaaggaaaaagca 433

                                                                       
Query: 399 gaacaacgtanacgagaacaggacatagtgtatgagaggaagcttcataaagagaggagc 458
           || | ||| | ||||||||| || ||| | || |||||||||||||| |||||||| |||
Sbjct: 434 gagctacgcaaacgagaacaagatataatatacgagaggaagcttcagaaagagagaagc 493

                                                              
Query: 459 aaggaagaccacctgtttgctgacaaagacnagtttgtaacatctgcctac 509
           ||||| |||||||| ||||  ||||| ||  | ||||||||||| ||||||
Sbjct: 494 aaggaggaccacctttttggggacaaggataaatttgtaacatcagcctac 544
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>dbj|AK073064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021J15, full
           insert sequence
          Length = 1127

 Score =  192 bits (97), Expect = 8e-46
 Identities = 169/194 (87%)
 Strand = Plus / Plus

                                                                       
Query: 316 tgaaggagaaggccgctcgccccaagatacaggccaaggtcgttcgcgagtcanagtaca 375
           ||||| |||||||||| | ||||||||| |||| || ||| |||||||||||| | ||||
Sbjct: 8   tgaagcagaaggccgccctccccaagatgcaggacagggtagttcgcgagtcaaaataca 67

                                                                       
Query: 376 ttgaagcacttaaggagaaagcagaacaacgtanacgagaacaggacatagtgtatgaga 435
           |||  ||||||||||||||||| |||||||||| |||||| ||||||||  | |||||||
Sbjct: 68  ttgcggcacttaaggagaaagccgaacaacgtaaacgagagcaggacattatttatgaga 127

                                                                       
Query: 436 ggaagcttcataaagagaggagcaaggaagaccacctgtttgctgacaaagacnagtttg 495
           |||||||||| ||||||||||| |||||||||||||| | || |||||||||| | ||||
Sbjct: 128 ggaagcttcaaaaagagaggagtaaggaagaccacctatatggtgacaaagacaaatttg 187

                         
Query: 496 taacatctgcctac 509
           | ||||||||||||
Sbjct: 188 ttacatctgcctac 201
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  153 bits (77), Expect = 7e-34
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                            
Query: 364      agtcanagtacattgaagcacttaaggagaaagcagaacaacgtanacgagaacaggaca 423
                ||||| | |||||||  ||||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 21903528 agtcaaaatacattgcggcacttaaggagaaagccgaacaacgtaaacgagagcaggaca 21903469

                                                                            
Query: 424      tagtgtatgagaggaagcttcataaagagaggagcaaggaagaccacctgtttgctgaca 483
                |  | ||||||||||||||||| ||||||||||| |||||||||||||| | || |||||
Sbjct: 21903468 ttatttatgagaggaagcttcaaaaagagaggagtaaggaagaccacctatatggtgaca 21903409

                                          
Query: 484      aagacnagtttgtaacatctgcctac 509
                ||||| | ||||| ||||||||||||
Sbjct: 21903408 aagacaaatttgttacatctgcctac 21903383



 Score =  119 bits (60), Expect = 9e-24
 Identities = 123/145 (84%), Gaps = 6/145 (4%)
 Strand = Plus / Minus

                                                                            
Query: 81       atgcagcgatacgggctgcagctccgcaagaagccggcggcctcctcgtcctcgcga--- 137
                |||||| | ||||||||||||||||||| |||||||||||| |||||||| |||||    
Sbjct: 21904392 atgcagaggtacgggctgcagctccgcacgaagccggcggcgtcctcgtcgtcgcgggcg 21904333

                                                                            
Query: 138      ---ccgctaccgccggcgcgcccactggcggccttcgccgacgacngcgatgacnacgtg 194
                   ||||  |||||||| ||||| ||||||||||||||||||||  |||| ||  |||||
Sbjct: 21904332 ccgccgccgccgccggcccgccccctggcggccttcgccgacgatggcgacgatgacgtg 21904273

                                         
Query: 195      gaggccgacatcctccgccagtcgt 219
                ||||||||||||||||| |||||||
Sbjct: 21904272 gaggccgacatcctccggcagtcgt 21904248



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                            
Query: 239      gaaggtggaggaactgcagaagaaagcgatcgaggaggatccctcggtgtttgcctatna 298
                ||||||||| || | ||||||||| ||||| || ||||||||||||||||| |||||  |
Sbjct: 21904110 gaaggtggaagagcagcagaagaaggcgatggaagaggatccctcggtgttcgcctacga 21904051

                                                                            
Query: 299      cgaggtgtacgatgatntgaaggagaaggccgctcgccccaagatacaggccaaggtcgt 358
                |||||| || || ||  ||||| |||||||||| | ||||||||| |||| || ||| ||
Sbjct: 21904050 cgaggtttatgacgacatgaagcagaaggccgccctccccaagatgcaggacagggtagt 21903991

                       
Query: 359      tcgcgag 365
                |||||||
Sbjct: 21903990 tcgcgag 21903984



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 34       ctagggtttgctccgcgtcgaatcc 58
                |||||||||||||||||||||||||
Sbjct: 21904444 ctagggtttgctccgcgtcgaatcc 21904420
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>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01,
             complete sequence
          Length = 127713

 Score =  153 bits (77), Expect = 7e-34
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                         
Query: 364   agtcanagtacattgaagcacttaaggagaaagcagaacaacgtanacgagaacaggaca 423
             ||||| | |||||||  ||||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 88229 agtcaaaatacattgcggcacttaaggagaaagccgaacaacgtaaacgagagcaggaca 88170

                                                                         
Query: 424   tagtgtatgagaggaagcttcataaagagaggagcaaggaagaccacctgtttgctgaca 483
             |  | ||||||||||||||||| ||||||||||| |||||||||||||| | || |||||
Sbjct: 88169 ttatttatgagaggaagcttcaaaaagagaggagtaaggaagaccacctatatggtgaca 88110

                                       
Query: 484   aagacnagtttgtaacatctgcctac 509
             ||||| | ||||| ||||||||||||
Sbjct: 88109 aagacaaatttgttacatctgcctac 88084



 Score =  119 bits (60), Expect = 9e-24
 Identities = 123/145 (84%), Gaps = 6/145 (4%)
 Strand = Plus / Minus

                                                                         
Query: 81    atgcagcgatacgggctgcagctccgcaagaagccggcggcctcctcgtcctcgcga--- 137
             |||||| | ||||||||||||||||||| |||||||||||| |||||||| |||||    
Sbjct: 89093 atgcagaggtacgggctgcagctccgcacgaagccggcggcgtcctcgtcgtcgcgggcg 89034

                                                                         
Query: 138   ---ccgctaccgccggcgcgcccactggcggccttcgccgacgacngcgatgacnacgtg 194
                ||||  |||||||| ||||| ||||||||||||||||||||  |||| ||  |||||
Sbjct: 89033 ccgccgccgccgccggcccgccccctggcggccttcgccgacgatggcgacgatgacgtg 88974

                                      
Query: 195   gaggccgacatcctccgccagtcgt 219
             ||||||||||||||||| |||||||
Sbjct: 88973 gaggccgacatcctccggcagtcgt 88949



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                         
Query: 239   gaaggtggaggaactgcagaagaaagcgatcgaggaggatccctcggtgtttgcctatna 298
             ||||||||| || | ||||||||| ||||| || ||||||||||||||||| |||||  |
Sbjct: 88811 gaaggtggaagagcagcagaagaaggcgatggaagaggatccctcggtgttcgcctacga 88752

                                                                         
Query: 299   cgaggtgtacgatgatntgaaggagaaggccgctcgccccaagatacaggccaaggtcgt 358
             |||||| || || ||  ||||| |||||||||| | ||||||||| |||| || ||| ||
Sbjct: 88751 cgaggtttatgacgacatgaagcagaaggccgccctccccaagatgcaggacagggtagt 88692

                    
Query: 359   tcgcgag 365
             |||||||
Sbjct: 88691 tcgcgag 88685



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 34    ctagggtttgctccgcgtcgaatcc 58
             |||||||||||||||||||||||||
Sbjct: 89145 ctagggtttgctccgcgtcgaatcc 89121
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>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete
             sequence
          Length = 112892

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 114   ccggcggcctcctcgtcctcgcg 136
             |||||||||||||||||||||||
Sbjct: 75838 ccggcggcctcctcgtcctcgcg 75860
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 114      ccggcggcctcctcgtcctcgcg 136
                |||||||||||||||||||||||
Sbjct: 29773623 ccggcggcctcctcgtcctcgcg 29773601
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 114      ccggcggcctcctcgtcctcgcg 136
                |||||||||||||||||||||||
Sbjct: 29865045 ccggcggcctcctcgtcctcgcg 29865023
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>gb|AY020978.1| Oryza sativa microsatellite MRG3303 containing (TA)X16, genomic
           sequence
          Length = 232

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 439 agcttcataaagagaggagca 459
           |||||||||||||||||||||
Sbjct: 168 agcttcataaagagaggagca 188
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 439      agcttcataaagagaggagca 459
                |||||||||||||||||||||
Sbjct: 20307670 agcttcataaagagaggagca 20307690
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 113     gccggcggcctcctcgtcctc 133
               |||||||||||||||||||||
Sbjct: 1999478 gccggcggcctcctcgtcctc 1999498
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548D03
          Length = 156709

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    gccggcggcctcctcgtcctc 133
              |||||||||||||||||||||
Sbjct: 128258 gccggcggcctcctcgtcctc 128278
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0041F13
          Length = 163230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   gccggcggcctcctcgtcctc 133
             |||||||||||||||||||||
Sbjct: 20340 gccggcggcctcctcgtcctc 20360
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>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056L09
          Length = 152910

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 439   agcttcataaagagaggagca 459
             |||||||||||||||||||||
Sbjct: 55418 agcttcataaagagaggagca 55438
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>gb|AF144654.1|AF144654 Glycine max isolate 48Hidatsa internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed space 2, partial
           sequence
          Length = 657

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 119 cggcctcctcgtcctcgcgac 139
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>gb|U60550.1|GSU60550 Glycine soja small subunit ribosomal RNA gene, partial sequence,
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence,
           and large subunit ribosomal RNA gene, partial sequence
          Length = 662

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>gb|U60551.1|GMU60551 Glycine max small subunit ribosomal RNA gene, partial sequence,
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence,
           and large subunit ribosomal RNA gene, partial sequence
          Length = 662

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>emb|AL929458.7| Zebrafish DNA sequence from clone CH211-248I12, complete sequence
          Length = 137478

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 463    aagaccacctgtttgctgaca 483
              |||||||||||||||||||||
Sbjct: 132336 aagaccacctgtttgctgaca 132356
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>gb|L36612.1|SOYITS Glycine max internal transcribed spacer DNA
          Length = 651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 110 cggcctcctcgtcctcgcgac 130
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>emb|AJ224109.1|GSAJ4109 Glycine soja DNA for internal transcribed spacer, isolate 043
          Length = 661

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>emb|AJ011337.1|GMA011337 Glycine max internal transcribed spacers ITS1 and ITS2, isolate
           Williams
          Length = 657

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>emb|AJ009791.1|GSO9791 Glycine soja 5.8S rRNA gene and internal transcribed spacers,
           isolate 039, partial
          Length = 661

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>emb|AJ009790.1|GSO9790 Glycine soja 5.8S rRNA gene and internal transcribed spacers,
           isolate 001
          Length = 658

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>emb|AJ009787.1|GMA9787 Glycine max 5.8S rRNA gene and internal transcribed spacers,
           isolate 001, partial
          Length = 659

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cggcctcctcgtcctcgcgac 138
           |||||||||||||||||||||
Sbjct: 104 cggcctcctcgtcctcgcgac 124
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>ref|NM_118896.2| Arabidopsis thaliana kinase/ ribokinase AT4G27600 mRNA, complete
           cds
          Length = 1761

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 gagaggagcaaggaagacca 469
           ||||||||||||||||||||
Sbjct: 51  gagaggagcaaggaagacca 32
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>ref|XM_365446.1| Magnaporthe grisea 70-15 hypothetical protein (MG02148.4) partial
            mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 107  caagaagccggcggcctcctcgtc 130
            |||||||||||||||||| |||||
Sbjct: 1833 caagaagccggcggcctcgtcgtc 1856
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>gb|AC145195.2| Danio rerio clone CH211-160M5, complete sequence
          Length = 48040

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   tggaggaactgcagaagaaa 263
             ||||||||||||||||||||
Sbjct: 13329 tggaggaactgcagaagaaa 13348
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>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gagaggagcaaggaagacca 469
             ||||||||||||||||||||
Sbjct: 95545 gagaggagcaaggaagacca 95564
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>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project)
          Length = 95679

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gagaggagcaaggaagacca 469
             ||||||||||||||||||||
Sbjct: 34835 gagaggagcaaggaagacca 34854
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>gb|DQ432066.1| Amycolatopsis mediterranei glnR operon, partial sequence; putative
            thioredoxin, hypothetical protein, transcription
            regulator GlnR, putative acetyltransferase (LH3),
            putative phosphate ABC transporter, and putative
            phosphate transport system permease genes, complete cds
          Length = 6027

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 165  gccttcgccgacgacngcgatga 187
            ||||||||||||||| |||||||
Sbjct: 2006 gccttcgccgacgaccgcgatga 1984
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>emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, complete sequence
          Length = 169093

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 442   ttcataaagagaggagcaaggaag 465
             |||||||||||| |||||||||||
Sbjct: 13575 ttcataaagagaagagcaaggaag 13552
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>ref|XM_693431.1| PREDICTED: Danio rerio similar to zinc finger protein 291
           (LOC570004), partial mRNA
          Length = 258

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 tggaggaactgcagaagaaa 263
           ||||||||||||||||||||
Sbjct: 51  tggaggaactgcagaagaaa 70
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>gb|AY052355.1| Arabidopsis thaliana AT4g27600/T29A15_90 mRNA, complete cds
          Length = 1675

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 gagaggagcaaggaagacca 469
           ||||||||||||||||||||
Sbjct: 51  gagaggagcaaggaagacca 32
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>emb|BX827925.1|CNS0A3X7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH35ZF08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1591

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 gagaggagcaaggaagacca 469
           ||||||||||||||||||||
Sbjct: 31  gagaggagcaaggaagacca 12
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>emb|BX827118.1|CNS0A3LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS11ZD05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1611

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 gagaggagcaaggaagacca 469
           ||||||||||||||||||||
Sbjct: 32  gagaggagcaaggaagacca 13
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 381     gcacttaaggagaaagcagaacaa 404
               ||||||||||||||| ||||||||
Sbjct: 2714120 gcacttaaggagaaaacagaacaa 2714097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,142,152
Number of Sequences: 3902068
Number of extensions: 3142152
Number of successful extensions: 62273
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62061
Number of HSP's gapped (non-prelim): 208
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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