| Clone Name | bart07c08 |
|---|---|
| Clone Library Name | barley_pub |
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 89.4 bits (220), Expect = 5e-18 Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 28/130 (21%) Frame = +2 Query: 182 GRITVYWGQT---------------------FLNNFGGGKY-NLNLAGHSWKAVGP---- 283 G I +YWGQ FLN FG G+ +NLAGH A G Sbjct: 27 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 86 Query: 284 --HVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLD 457 ++ CQ Y+LAS+ADAK VA +LWN +LGGKS +RP G+AVLD Sbjct: 87 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 146 Query: 458 GVDFDIELGS 487 G+DFDIE GS Sbjct: 147 GIDFDIEHGS 156
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 87.8 bits (216), Expect = 1e-17 Identities = 52/130 (40%), Positives = 66/130 (50%), Gaps = 28/130 (21%) Frame = +2 Query: 182 GRITVYWGQT---------------------FLNNFGGGKY-NLNLAGHSWKA------V 277 G I +YWGQ FLN FG G+ +NLAGH A V Sbjct: 26 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSV 85 Query: 278 GPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLD 457 ++ CQ+ YSL+S DA+ VA +LWN +LGG+S +RP G+AVLD Sbjct: 86 STGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDAQNVANYLWNNFLGGQSSSRPLGDAVLD 145 Query: 458 GVDFDIELGS 487 G+DFDIELGS Sbjct: 146 GIDFDIELGS 155
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 87.4 bits (215), Expect = 2e-17 Identities = 54/130 (41%), Positives = 65/130 (50%), Gaps = 28/130 (21%) Frame = +2 Query: 182 GRITVYWGQT---------------------FLNNFGGGKY-NLNLAGHSWKAV------ 277 G I +YWGQ FL FG G+ LNLAGH A Sbjct: 30 GGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHF 89 Query: 278 GPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLD 457 G VK CQS YS+ S+ DAK +A +LWN +LGGKS +RP G+AVLD Sbjct: 90 GSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLD 149 Query: 458 GVDFDIELGS 487 G+DF+IELGS Sbjct: 150 GIDFNIELGS 159
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 85.9 bits (211), Expect = 5e-17 Identities = 54/149 (36%), Positives = 70/149 (46%), Gaps = 24/149 (16%) Frame = +2 Query: 113 LALAIVGCIXXXXXXXXXXXGKTGRITVYWGQ---------------------TFLNNFG 229 LAL V GKTG++TV+WG+ +FL+ FG Sbjct: 13 LALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFG 72 Query: 230 G-GKYNLNLAGHSWKAVGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNY 406 GKY+L+L+GH +VG +K+CQS YSL S A + HLWN Sbjct: 73 ANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNS 132 Query: 407 YLGGK--SRNRPFGNAVLDGVDFDIELGS 487 Y GG S RPFG+A LDGVD +E G+ Sbjct: 133 YFGGSKPSVPRPFGDAWLDGVDLFLEHGT 161
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 83.6 bits (205), Expect = 3e-16 Identities = 51/130 (39%), Positives = 64/130 (49%), Gaps = 28/130 (21%) Frame = +2 Query: 182 GRITVYWGQT---------------------FLNNFGGGKY-NLNLAGHSWKAVG----- 280 G I+VYWGQ FL FGGG+ LNLAGH ++ Sbjct: 30 GGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVF 89 Query: 281 -PHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLD 457 +K CQS YSL S DA VA ++WN +LGG+S +RP G+A+LD Sbjct: 90 SDQIKECQSKDIKVLLSLGGASGSYSLTSADDATQVANYIWNNFLGGQSSSRPLGDAILD 149 Query: 458 GVDFDIELGS 487 GVDFDIE G+ Sbjct: 150 GVDFDIESGT 159
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 82.0 bits (201), Expect = 8e-16 Identities = 51/131 (38%), Positives = 66/131 (50%), Gaps = 28/131 (21%) Frame = +2 Query: 176 KTGRITVYWGQ---------------------TFLNNFGGGKY-NLNLAGHSWKAVG--- 280 K G I VYWGQ FL++FG + LNLAGH + G Sbjct: 23 KAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQ 82 Query: 281 ---PHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAV 451 +++CQS Y+L+S DA+ VA +LWN +LGG+S RP G+AV Sbjct: 83 QLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDARQVADYLWNNFLGGQSSFRPLGDAV 142 Query: 452 LDGVDFDIELG 484 LDG+DFDIELG Sbjct: 143 LDGIDFDIELG 153
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 80.1 bits (196), Expect = 3e-15 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 26/156 (16%) Frame = +2 Query: 98 SMGRR---LALAIVGCIXXXXXXXXXXXGKTGRITVYWGQ-------------------- 208 ++GRR + LA+V + GKTG++TV+WG+ Sbjct: 3 ALGRRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVV 62 Query: 209 -TFLNNFGGGKYNLNLAGHSWKAVGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGV 385 +F + FG G+Y +L+GH + +G +K+CQS YSL + A V Sbjct: 63 ISFYSVFGHGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADV 122 Query: 386 AKHLWNYYLGGKSRN--RPFGNAVLDGVDFDIELGS 487 A ++WN ++ G+ RPFG+A +DG+DF I+ G+ Sbjct: 123 ADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGA 158
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 79.3 bits (194), Expect = 5e-15 Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Frame = +2 Query: 179 TGRITVYWGQTFLNNFGGGKYNLNLAGHSWKAVGPHVKYCQSXXXXXXXXXXXXXXXYSL 358 TGR T TF N FG G+Y+L+++GH AVG +K+CQS YSL Sbjct: 51 TGRYTTVI-ITFYNAFGHGRYSLDISGHPLAAVGADIKHCQSRGITVLLSIGGQGGAYSL 109 Query: 359 ASKADAKGVAKHLWNYYLGGKSRN--RPFG-NAVLDGVDFDIELG 484 + A A VA +LWN YLGG RPFG +A +DG+DF I+ G Sbjct: 110 PTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQG 154
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 78.6 bits (192), Expect = 8e-15 Identities = 50/128 (39%), Positives = 61/128 (47%), Gaps = 28/128 (21%) Frame = +2 Query: 188 ITVYWGQT---------------------FLNNFGGGKYN-LNLAGH------SWKAVGP 283 I +YWGQ FL++FG G+ LNLAGH + Sbjct: 28 IAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSD 87 Query: 284 HVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLDGV 463 + C+S YSL+S DAK VA +WN YLGG+S +RP G AVLDGV Sbjct: 88 EINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQVANFIWNSYLGGQSDSRPLGAAVLDGV 147 Query: 464 DFDIELGS 487 DFDIE GS Sbjct: 148 DFDIESGS 155
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 77.4 bits (189), Expect = 2e-14 Identities = 49/132 (37%), Positives = 62/132 (46%), Gaps = 28/132 (21%) Frame = +2 Query: 176 KTGRITVYWGQT---------------------FLNNFGGGKYN-LNLAGHSWKAVGP-- 283 + G I +YWGQ FL FG G+ LNLAGH G Sbjct: 21 EAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACT 80 Query: 284 ----HVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAV 451 ++ CQ+ Y L+S DA+ VA +LWN YLGG+S RP G+AV Sbjct: 81 GLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWNNYLGGQSNTRPLGDAV 140 Query: 452 LDGVDFDIELGS 487 LDG+DFDIE G+ Sbjct: 141 LDGIDFDIEGGT 152
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 77.0 bits (188), Expect = 2e-14 Identities = 47/127 (37%), Positives = 60/127 (47%), Gaps = 27/127 (21%) Frame = +2 Query: 185 RITVYWGQT---------------------FLNNFGGGKYN-LNLAGH-----SWKAVGP 283 +I +YWGQ F+ FG G+ LNLAGH + ++ Sbjct: 27 QIVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPATNCNSLSS 86 Query: 284 HVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLDGV 463 +K CQ YSL+S DA A +LWN YLGG+S RP G+AVLDG+ Sbjct: 87 DIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTYLGGQSSTRPLGDAVLDGI 146 Query: 464 DFDIELG 484 DFDIE G Sbjct: 147 DFDIESG 153
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 75.5 bits (184), Expect = 7e-14 Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 28/127 (22%) Frame = +2 Query: 188 ITVYWGQT---------------------FLNNFGGGKY-NLNLAGHSWKAVG------P 283 I VYWGQ FL+ FG G+ +NLAGH + P Sbjct: 26 IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSP 85 Query: 284 HVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLDGV 463 ++ CQ+ YSL S +A +A +LWN +LGG S +RP G+AVLDG+ Sbjct: 86 EIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLGGTSTSRPLGDAVLDGI 145 Query: 464 DFDIELG 484 DFDIE G Sbjct: 146 DFDIESG 152
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 62.0 bits (149), Expect = 8e-10 Identities = 35/91 (38%), Positives = 44/91 (48%) Frame = +2 Query: 215 LNNFGGGKYNLNLAGHSWKAVGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKH 394 L++ G Y N S AVG +K CQ Y S A + A+ Sbjct: 79 LSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQT 138 Query: 395 LWNYYLGGKSRNRPFGNAVLDGVDFDIELGS 487 +WN + GG S RPFG+AV+DGVD DIE GS Sbjct: 139 IWNLFGGGNSDTRPFGDAVIDGVDLDIEGGS 169
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 60.8 bits (146), Expect = 2e-09 Identities = 34/91 (37%), Positives = 44/91 (48%) Frame = +2 Query: 215 LNNFGGGKYNLNLAGHSWKAVGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKH 394 L++ G Y N S AVG +K CQ Y S A + A+ Sbjct: 79 LSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQT 138 Query: 395 LWNYYLGGKSRNRPFGNAVLDGVDFDIELGS 487 +WN + GG S RPFG+AV+DGVD DIE G+ Sbjct: 139 IWNLFGGGSSDTRPFGDAVIDGVDLDIEGGA 169
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 59.3 bits (142), Expect = 5e-09 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 13/106 (12%) Frame = +2 Query: 209 TFLNNFG-GGKYNLNLAGHSWKA------------VGPHVKYCQSXXXXXXXXXXXXXXX 349 +FLN F GG +NLA + VG +K CQS Sbjct: 62 SFLNKFNMGGLPEINLASACEQTFFPNTNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGS 121 Query: 350 YSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLDGVDFDIELGS 487 Y +S ++ + A+ +WN + GG S RPF +AV+DG+D DIE GS Sbjct: 122 YGFSSDSEGQTFAETIWNLFGGGTSDTRPFDDAVIDGIDLDIEGGS 167
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 53.5 bits (127), Expect = 3e-07 Identities = 25/68 (36%), Positives = 34/68 (50%) Frame = +2 Query: 275 VGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVL 454 +G +K CQ Y +S ++A A LWN + GGK RPF +A++ Sbjct: 80 IGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFGGGKDSERPFDDAIV 139 Query: 455 DGVDFDIE 478 DG DFDIE Sbjct: 140 DGFDFDIE 147
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/70 (37%), Positives = 33/70 (47%) Frame = +2 Query: 275 VGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVL 454 +G +K CQS Y + A A A LWN + G+ RPF +AV+ Sbjct: 86 IGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFGAGEDPERPFDDAVV 145 Query: 455 DGVDFDIELG 484 DG DFDIE G Sbjct: 146 DGFDFDIEHG 155
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +2 Query: 269 KAVGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKS---RNRPF 439 + + +KYCQ+ Y + A AK A LW+ + K+ +RPF Sbjct: 85 QTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATAKQFAHTLWDLFGNSKNLATNDRPF 144 Query: 440 GNAVLDGVDFDIE 478 +AVLDG DFDIE Sbjct: 145 YDAVLDGFDFDIE 157
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.0 bits (97), Expect = 9e-04 Identities = 37/126 (29%), Positives = 48/126 (38%), Gaps = 29/126 (23%) Frame = +2 Query: 188 ITVYWGQ--------------------TFLNNFGGG--KYNLNLAGHSWKAVG------- 280 I VYWGQ +FL+ FG K L L G +VG Sbjct: 32 IAVYWGQREDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLE 91 Query: 281 PHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRNRPFGNAVLDG 460 +K CQ YS S AK +A++L Y+L + R P G LDG Sbjct: 92 SQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSER-REGPLGKVALDG 150 Query: 461 VDFDIE 478 + FDI+ Sbjct: 151 IHFDIQ 156
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 39.3 bits (90), Expect = 0.006 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 275 VGPHVKYCQSXXXXXXXXXXXXXXXYSLASKADAKGVAKHLWNYYLGGKSRN-RPFGNAV 451 + ++ CQS Y + + A+ A+ LW+ + G + RPF +AV Sbjct: 89 IAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAV 148 Query: 452 LDGVDFDIE 478 +DG DFDIE Sbjct: 149 VDGFDFDIE 157
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 35.0 bits (79), Expect = 0.11 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +2 Query: 350 YSLASKADAKGVAKHLWNYY---LGGKSRNRPFGNAVLDGVDFDIELGS 487 Y + S+ A A LW + + RPFG A +DG DFDIE GS Sbjct: 130 YEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGS 178
>Y1989_PYRHO (O57713) Hypothetical UPF0104 protein PH1989| Length = 335 Score = 30.0 bits (66), Expect = 3.4 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -2 Query: 243 LYLPPPKLFRKVCPQYTVIRPVFPVADAVLSDERRMQPTMAR-ASRRPMLCNDMMFSFFL 67 LYL ++FRK+ P + + + +L + R + T R A R+ L + M++SF L Sbjct: 180 LYLA--RIFRKIFPSKFSMSED-KIKEKLLGEIREFKETFLRLAKRKRRLSSTMLYSFIL 236 Query: 66 FTVGLIS*VFVFL 28 + ++ F+FL Sbjct: 237 WGADILKTYFIFL 249
>GAG_IPMAE (P31790) Retrovirus-related Gag polyprotein| Length = 255 Score = 29.6 bits (65), Expect = 4.4 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +1 Query: 25 KQKHKNLAN*SNREEEEGEHHVVAQHGAPAGPGH--RRLHPPLVAQHRVRDGKDRPDHGV 198 + K KN + +E+GE + G AG H R L+PPLV ++ PD GV Sbjct: 139 RYKGKNALGEIRKRDEKGE-----KKGDRAGEAHKERSLYPPLVEFKQLTLSNSEPDEGV 193
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 28.9 bits (63), Expect = 7.6 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = -2 Query: 249 LRLYLPPPKLFRKVCPQYTVIRPV-FPVADAVLSDERRMQPTMARASRRPMLCNDMMFSF 73 L L +P P K V+ + F + D V ++ ++ P +ASRR L + F Sbjct: 384 LDLTIPLPFFRNKQHMSECVVLAISFSILDFVFDNQGQVNPEFLKASRRRQLSQKLKSRF 443 Query: 72 FLFTVGLIS*VFVFLLALQMVCVH 1 F GL+ V +AL ++ V+ Sbjct: 444 FF--AGLMIFVMSPFIALYLILVY 465
>PQQF_PSEAE (Q9I2D2) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 775 Score = 28.9 bits (63), Expect = 7.6 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -2 Query: 387 ATPLASALEAREY-LPMPPPMASRTRIFLDWQYLTWGPTAFQEWPARLRLYLPPPKLFRK 211 A PLA+ A + LP+PP A+ +FL W+ F PAR R +L + R Sbjct: 417 APPLAAQRHAWRFELPLPPSAAAEGALFLRWR--------FPGVPARSR-FLALRQALRP 467 Query: 210 VCPQ 199 +C Q Sbjct: 468 LCGQ 471
>SALL3_MOUSE (Q62255) Sal-like protein 3 (Spalt-like protein 3) (MSal) (Fragment)| Length = 1323 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 124 HRRLHPPLVAQHRVRDGKDRPDHGVLGA 207 H RLHPPL++Q R G+ D LG+ Sbjct: 1295 HLRLHPPLLSQVHCRVGRQALDPTCLGS 1322
>CORA_HPBDU (P03154) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = -2 Query: 381 PLASALEA--REYLPMPPPMASRTRIFLDWQY--LTWGPTAFQEWPARLRLYLPPPKLFR 214 P+ + + A + Y + R R L W Y L WG + +RLR +L P+ +R Sbjct: 163 PITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEAQVTNYISRLRTWLSTPEKYR 222
>CORA_HHBV (P13845) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 9.9 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = -2 Query: 357 REYLPMPPPMASRTRIFLDWQY--LTWGPTAFQEWPARLRLYLPPPKLFR-KVCPQYTVI 187 R Y + + R L W Y L WG + +RLR +L P+ +R K P I Sbjct: 173 RVYTKLNEQALDKARRLLWWHYNCLLWGEATVTNYISRLRTWLSTPEKYRGKDAPTIEAI 232 Query: 186 -RPV 178 RP+ Sbjct: 233 TRPI 236
>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 521 Score = 28.5 bits (62), Expect = 9.9 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Frame = -2 Query: 387 ATPLASALEAREYLPMPPPMASRTR-----IFLDWQYLTWGPTAFQEWPARLRLYLPPPK 223 +T + A++ E P PPP +T + L+ +L P A L PPP Sbjct: 325 STSIEEAMKRGEDPPTPPPRPQKTHSRASSLDLNKVFLPSAPA------ANSGLLPPPPA 378 Query: 222 LFRKVCPQYTVIRPVFPVADAVLSDERRMQPTMARAS 112 L + CP + PV++A L + P+ A S Sbjct: 379 LPPRPCPTQSE-----PVSEADLHSQLNRAPSQAAES 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,962,389 Number of Sequences: 219361 Number of extensions: 1133344 Number of successful extensions: 3097 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3087 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)