| Clone Name | bart06f12 |
|---|---|
| Clone Library Name | barley_pub |
>OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic anion| transporter 4) Length = 550 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Frame = +1 Query: 256 EPRWHCTGXXXXXXXXXXXXXXXXXGAWAWDRPAVTS-VISEWSLKCAGPALVSLPASSF 432 +P+W W +DR TS ++++W L C+ L L S F Sbjct: 90 QPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIF 149 Query: 433 FAGCLAGGFLLTTLADSLLGRRKML 507 +G L G F+ L+ GR+ ML Sbjct: 150 MSGILVGSFIWGLLS-YRFGRKPML 173
>S22A4_MOUSE (Q9Z306) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) Length = 553 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +1 Query: 337 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 513 W +D+ ++++++EW+L C L S FF G L G F+ L+D GR+K+L Sbjct: 117 WEYDKDIFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDR-FGRKKVLFA 175 Query: 514 SI 519 ++ Sbjct: 176 TM 177
>S22A9_HUMAN (Q8IVM8) Solute carrier family 22 member 9 (Organic anion| transporter 4) Length = 553 Score = 39.3 bits (90), Expect = 0.007 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +1 Query: 337 WAWDRPAVTS-VISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKML 507 W +DR + +S +++EW L C +L S+ F AG + GG L L+D GRR +L Sbjct: 120 WVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDR-FGRRFVL 176
>S22A5_MOUSE (Q9Z0E8) Organic cation/carnitine transporter 2 (Solute carrier| family 22 member 5) (High-affinity sodium-dependent carnitine cotransporter) Length = 557 Score = 38.5 bits (88), Expect = 0.012 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 337 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 513 W +D+ ++++++EW L C L S FF G L G F+ L+D GR+ +L + Sbjct: 117 WEYDKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDR-FGRKNVLFL 175 Query: 514 SI 519 ++ Sbjct: 176 TM 177
>S22A4_RAT (Q9R141) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) Length = 553 Score = 38.1 bits (87), Expect = 0.015 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 337 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 513 W + + ++++++EW+L C L S FF G L G F+ L+D GR+K+L Sbjct: 117 WEYSKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDR-FGRKKVLFA 175 Query: 514 SI 519 ++ Sbjct: 176 TM 177
>OAT6_MOUSE (Q80UJ1) Solute carrier family 22 member 20 (Organic anion| transporter 6) Length = 556 Score = 37.7 bits (86), Expect = 0.020 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +1 Query: 337 WAWDRPAVTS-VISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 513 W +DR S ++ EW L C L L S + +G L G L LAD LGR+ L+ Sbjct: 111 WVYDRSIFPSTIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGGLADR-LGRKAPLVW 169 Query: 514 SIVSM 528 S + + Sbjct: 170 SYLQL 174
>S22A4_HUMAN (Q9H015) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) (Ergothioneine transporter) (ET transporter) Length = 551 Score = 37.0 bits (84), Expect = 0.034 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 358 VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSI 519 +++V++EW+L C V L S FF G L G F+ L+D GR+ +L ++ Sbjct: 125 LSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDR-FGRKNVLFATM 177
>S22A5_HUMAN (O76082) Organic cation/carnitine transporter 2 (Solute carrier| family 22 member 5) (High-affinity sodium-dependent carnitine cotransporter) Length = 557 Score = 37.0 bits (84), Expect = 0.034 Identities = 18/54 (33%), Positives = 31/54 (57%) Frame = +1 Query: 358 VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSI 519 ++++++EW+L C L S FF G L G F+ L+D GR+ +L V++ Sbjct: 125 LSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFISGQLSDR-FGRKNVLFVTM 177
>OCTN3_MOUSE (Q9WTN6) Organic cation/carnitine transporter 3 (Solute carrier| family 22 member 21) (Solute carrier family 22 member 9) Length = 564 Score = 37.0 bits (84), Expect = 0.034 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 337 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 513 W +D+ ++++++EW L C L S F+ G L G F+ L+D GR+ +L + Sbjct: 117 WEYDKDIFLSTIVTEWDLVCKDDWKAPLTTSFFYVGVLLGSFISGQLSDR-FGRKNILFL 175 Query: 514 SI 519 ++ Sbjct: 176 TM 177
>S22A5_RAT (O70594) Organic cation/carnitine transporter 2 (Solute carrier| family 22 member 5) (High-affinity sodium-dependent carnitine cotransporter) (UST2r) (CT1) Length = 557 Score = 36.6 bits (83), Expect = 0.044 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 337 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 513 W +++ ++++++EW L C L S FF G L G F+ L+D GR+ +L + Sbjct: 117 WEYNKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDR-FGRKNVLFL 175 Query: 514 SI 519 ++ Sbjct: 176 TM 177
>RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1 (EC 3.6.1.-)| (Helicase-like protein NHL) Length = 1400 Score = 33.1 bits (74), Expect = 0.49 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = -1 Query: 494 RPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAH 315 + +S+ +S +R++P A EDAG S+GP H SE G H Sbjct: 1176 KTQSKISSFLRQRPAGTVGAGGEDAGPSQSSGPPHGPAASEW--------------GEPH 1221 Query: 314 GDAVAAEQDASAP 276 G +A +Q AP Sbjct: 1222 GRDIAGQQATGAP 1234
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 32.3 bits (72), Expect = 0.83 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +2 Query: 11 SPDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRR 151 SP + + +R+R P P RS +++ R RRS TPSRR Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1998 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +2 Query: 41 KRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRRT 154 +R+R P P RS +++ R RRS TPSRR+ Sbjct: 1955 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRS 1992
>ARGC_SULAC (Q4JAQ3) N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-| aminoadipyl-phosphate reductase (EC 1.2.1.38) (EC 1.2.1.-) (AGPR) (N-acetyl-glutamate semialdehyde/N-acetyl-aminoadipate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 350 Score = 31.6 bits (70), Expect = 1.4 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Frame = -1 Query: 389 LSDHSEITDVTAGRSHAHAP--DGSAHGDAVAAEQDASAPVQC--HRGSASVNTEMNTCC 222 L ++ I+DV G S A +GS H + Q+A P + HR +A V E+ Sbjct: 168 LDNYRLISDVKVGSSEGGAKPSEGSHHPE----RQNAIRPYEAEGHRHAAEVEQELQYI- 222 Query: 221 ASKAYAKASNTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAAAV----SAIRTV 54 SK K S + VS+I GALA + WL+ + I Sbjct: 223 -SKKEVKIS-------------LVPHAVSTIRGALASVHGWLISDDLNEIEFWKKIIEFY 268 Query: 53 RGRAFVRL 30 RGR FVR+ Sbjct: 269 RGRKFVRV 276
>STF_LAMBD (P03764) Side tail fiber protein| Length = 774 Score = 31.2 bits (69), Expect = 1.9 Identities = 40/161 (24%), Positives = 58/161 (36%), Gaps = 6/161 (3%) Frame = -1 Query: 485 SESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGS---AH 315 SE+A+ R +++ AK+ + +SAG A S TA + A A S A Sbjct: 230 SEAATSARDAVASKEAAKSSETNASSSAGRAASS-------ATAAENSARAAKTSETNAR 282 Query: 314 GDAVAAEQDASAPVQCH---RGSASVNTEMNTCCASKAYAKASNTALRSCRAPVAPMYVS 144 AAE+ ASA GSAS + T A A + + + + A A Sbjct: 283 SSETAAERSASAAADAKTAAAGSASTASTKATEAAGSAVSASQSKSAAEAAAIRAKNSAK 342 Query: 143 MVSSIDGALAGLVLWLVRSGAAAVSAIRTVRGRAFVRLPLA 21 I A+A R G +S+ P A Sbjct: 343 RAEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKA 383
>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner| cell wall protein) Length = 238 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = -1 Query: 431 NEDAGRETSAGPAHLSD-HSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAPVQCHRGS 255 N DA SA + S+ ++ + D ++ S + + A A+ AS+ + S Sbjct: 69 NNDADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSS 128 Query: 254 ASVNTEMNTCCASKAYAKASNT 189 AS +T+ ++ A+ + +KAS+T Sbjct: 129 ASSSTKASSSSAAPSSSKASST 150
>K0574_HUMAN (O60320) Protein KIAA0574 (Fragment)| Length = 405 Score = 30.4 bits (67), Expect = 3.2 Identities = 28/100 (28%), Positives = 40/100 (40%) Frame = -1 Query: 455 PPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAP 276 PP R ++ G + GP H+S + +D T S S GDA + Sbjct: 238 PPGRVSPEDPGMGSQVQPGPGHVSRST--SDPTLCTS-------SMAGDASS-------- 280 Query: 275 VQCHRGSASVNTEMNTCCASKAYAKASNTALRSCRAPVAP 156 HR S S + E A A S +A +CRA ++P Sbjct: 281 ---HRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSP 317
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 30.4 bits (67), Expect = 3.2 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 16/129 (12%) Frame = -1 Query: 494 RPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHL----SDHSEIT-----DVTAGRSH 342 RPR+ A VR PP P + G E +A PA HS + + + R+ Sbjct: 400 RPRAAVAPCVRAPPPGPGP-RAPAPGAEPAARPADARRVPQSHSSLAQAANQEQSLCRAR 458 Query: 341 AHAPDGS-------AHGDAVAAEQDASAPVQCHRGSASVNTEMNTCCASKAYAKASNTAL 183 A GS HG + A +AP+ +ASV E + + N + Sbjct: 459 ATVARGSGGPGVEGGHGPSRGAAPSGAAPLP---SAASVEQEAAVRPRKRRGSGQENPSP 515 Query: 182 RSCRAPVAP 156 +S R P+AP Sbjct: 516 QSTRPPLAP 524
>OAT5_HUMAN (Q63ZE4) Solute carrier family 22 member 10 (Organic anion| transporter 5) Length = 531 Score = 30.0 bits (66), Expect = 4.1 Identities = 20/83 (24%), Positives = 29/83 (34%) Frame = +1 Query: 259 PRWHCTGXXXXXXXXXXXXXXXXXGAWAWDRPAVTSVISEWSLKCAGPALVSLPASSFFA 438 P+W W +D+ S I W L C +L S+ Sbjct: 94 PQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTWDLVCDYQSLKSVVQFLLLT 153 Query: 439 GCLAGGFLLTTLADSLLGRRKML 507 G L GG + ++D GRR +L Sbjct: 154 GMLVGGIIGGHVSDR-FGRRFIL 175
>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3| (SPA-1-like protein 3) Length = 1781 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -1 Query: 458 KPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPD 327 K P+RQ A +D+ S G S HS +++ S +H+ D Sbjct: 1242 KHPSRQDAAGKDSPNRHSKGEPQYSSHSSSNTLSSNASSSHSDD 1285
>MOVP_ACLSA (P54892) Putative movement protein (50.4 kDa protein) (ORF2)| Length = 457 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 488 RSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHG 312 RSES RR+ P+ + N +G +T HL +HS+ D+ R A G HG Sbjct: 366 RSESVPGRRRQTPSWKDRGN--SGTDTGG---HLREHSDTGDLGTNRVPGRAGGGEIHG 419
>FACD2_MOUSE (Q80V62) Fanconi anemia group D2 protein homolog (Protein FACD2)| Length = 1450 Score = 29.3 bits (64), Expect = 7.1 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Frame = -1 Query: 530 DMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNE--DAGRETSAGPAHLSDHSEITDVT 357 D+DT+D + PRS SA + + + K + D+ + + + D SE Sbjct: 841 DLDTLD-----MMPRSSSAVAAKNRNKGKTGGKKQKADSNKASCSDTLLTEDTSECDMAP 895 Query: 356 AGRSHAHAPDGSAHGDAVAAEQDASA 279 +GRSH G + Q+ A Sbjct: 896 SGRSHVDKESTGKEGKTFVSLQNYRA 921
>CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37| Length = 611 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 479 SASVVRRKPPARQPAKNEDAGRETSAGPAHLS 384 S+S + P +Q KNE+ G + SA P HLS Sbjct: 26 SSSSSTEENPKKQARKNEEHGPDPSANPFHLS 57
>CN004_HUMAN (Q9H1B7) Protein C14orf4| Length = 796 Score = 29.3 bits (64), Expect = 7.1 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = -1 Query: 455 PPARQPAKNEDAGRETSA--GPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDAS 282 PP P N E++ GP+ ++ + D T G +H+ S H +A +++S Sbjct: 600 PPPLGPHSNRTTPPESAPQNGPSPMAALMSVAD-TLGTAHSPKDGSSVHSTTASARRNSS 658 Query: 281 APVQ-----CHRGSASVNTEMN 231 +PV R AS N ++N Sbjct: 659 SPVSPASVPGQRRLASRNGDLN 680
>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog| Length = 775 Score = 29.3 bits (64), Expect = 7.1 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = -1 Query: 455 PPARQPAKNEDAGRETSA--GPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDAS 282 PP P N E++ GP+ ++ + D T G +H+ S H +A +++S Sbjct: 579 PPPLGPHSNRTTPPESAPQNGPSPMAALMSVAD-TLGTAHSPKDGSSVHSTTASARRNSS 637 Query: 281 APVQ-----CHRGSASVNTEMN 231 +PV R AS N ++N Sbjct: 638 SPVSPASVPGQRRLASRNGDLN 659
>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1387 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = -1 Query: 464 RRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPD 327 RR+ PA + +D+ + +A DHS TA + + PD Sbjct: 253 RRRKPAATTSTTDDSNKAVAAAANGTKDHSATAGTTASANGSDTPD 298
>POLN_SLDV (Q8QL53) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2593 Score = 28.9 bits (63), Expect = 9.2 Identities = 21/89 (23%), Positives = 35/89 (39%) Frame = -1 Query: 428 EDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAPVQCHRGSAS 249 E+ GR+ +A P++ I DV DG ++ D + S + C RG+ Sbjct: 521 EEEGRQQAANPSY------IADVLGQDDEEEVDDGMSNVDLGEEDGVGSTIIDCQRGTVK 574 Query: 248 VNTEMNTCCASKAYAKASNTALRSCRAPV 162 V T + + T LR+ + V Sbjct: 575 VITAFGDNTMGEYLVLSPVTVLRTRKLAV 603
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 28.9 bits (63), Expect = 9.2 Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 1/123 (0%) Frame = -1 Query: 485 SESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDA 306 +++A R + A + +SAG A A S A SA G A Sbjct: 146 ADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSA-GAA 204 Query: 305 VAAEQDASAPVQCHRGSAS-VNTEMNTCCASKAYAKASNTALRSCRAPVAPMYVSMVSSI 129 +E +ASA +Q SAS T+ + S A AS A +S + S SS Sbjct: 205 KTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSA 264 Query: 128 DGA 120 A Sbjct: 265 TAA 267 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,340,869 Number of Sequences: 219361 Number of extensions: 834327 Number of successful extensions: 3801 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3653 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3792 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)