ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06d02 |
|---|---|
| Clone Library Name | barley_pub |
>PUR6_VIGAC (P55195) Phosphoribosylaminoimidazole carboxylase, chloroplast| precursor (EC 4.1.1.21) (AIR carboxylase) (AIRC) (Fragment) Length = 557 Score = 89.7 bits (221), Expect = 4e-18 Identities = 41/64 (64%), Positives = 51/64 (79%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 +M+CQAASQM IKV +LDP ++CPA+S+ + H+VGSF + V EFAKRC VLTVEIEHV Sbjct: 17 RMMCQAASQMAIKVMVLDPQENCPASSLSYHHMVGSFDESTKVEEFAKRCGVLTVEIEHV 76 Query: 503 DAVT 514 D T Sbjct: 77 DVDT 80
>PURK_STAAR (Q6GI19) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 67.0 bits (162), Expect = 3e-11 Identities = 27/62 (43%), Positives = 41/62 (66%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KVA+LDP +DCP V HE + + D A+ + ++CDV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVAVLDPAEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PURK_STAAW (Q8NX94) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 65.1 bits (157), Expect = 1e-10 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V HE + + D A+ + ++CDV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PURK_STAAS (Q6GAE8) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 65.1 bits (157), Expect = 1e-10 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V HE + + D A+ + ++CDV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PURK_STAAN (Q7A695) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 65.1 bits (157), Expect = 1e-10 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V HE + + D A+ + ++CDV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PURK_STAAM (Q99V32) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 65.1 bits (157), Expect = 1e-10 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V HE + + D A+ + ++CDV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PURK_STAAC (Q5HH19) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 65.1 bits (157), Expect = 1e-10 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V HE + + D A+ + ++CDV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PURK_STAHJ (Q4L574) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 374 Score = 60.5 bits (145), Expect = 3e-09 Identities = 26/62 (41%), Positives = 39/62 (62%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV LDP D P SV HE + ++ D +A+ E ++ DV+T E E++ Sbjct: 22 KMMAQSAQKMGFKVICLDPNPDSPCKSVAHEFITAAYDDEEALHELGEKSDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PUR6_PICME (Q01930) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 543 Score = 58.9 bits (141), Expect = 8e-09 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSV--CHEHVVGSFSDGDAVREFAKRCDVLTVEIE 496 +M+ +AA ++ IK IL+ PA + +H+ GSF+D A+ E A +CDVLTVEIE Sbjct: 16 RMIVEAAHRLNIKTVILENGDQAPAKQINALDDHIDGSFNDPKAIAELAAKCDVLTVEIE 75 Query: 497 HVD 505 HVD Sbjct: 76 HVD 78
>PURK_BACSU (P12045) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 379 Score = 58.5 bits (140), Expect = 1e-08 Identities = 24/61 (39%), Positives = 40/61 (65%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ +A QMG KVA++DP+KD P V + ++D +A+R+ A+ D++T E E++ Sbjct: 22 KMMAVSAKQMGYKVAVVDPVKDSPCGQVADVEITAHYNDREAIRKLAEISDIITYEFENI 81 Query: 503 D 505 D Sbjct: 82 D 82
>PUR6_DEBOC (P50504) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 557 Score = 58.2 bits (139), Expect = 1e-08 Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSV-CHEHVVGSFSDGDAVREFAKRCDVLTVEIEH 499 +M+ +AA+++ IK +LD + + PA + +EHV GSF+D ++ + A++CD+LTVEIEH Sbjct: 16 RMIVEAANRLNIKTVVLD-VPNSPAKQINSNEHVDGSFTDLKSIIQLAEKCDILTVEIEH 74 Query: 500 VD 505 VD Sbjct: 75 VD 76
>PURK_STAES (Q8CPP2) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 375 Score = 57.4 bits (137), Expect = 2e-08 Identities = 23/62 (37%), Positives = 39/62 (62%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V H+ + ++ D A+ + + DV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVIVLDPNEDCPCRYVAHQFIHANYDDEQALNQLGENSDVVTYEFENI 81 Query: 503 DA 508 + Sbjct: 82 SS 83
>PURK_STAEQ (Q5HQA5) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 375 Score = 57.4 bits (137), Expect = 2e-08 Identities = 23/62 (37%), Positives = 39/62 (62%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A +MG KV +LDP +DCP V H+ + ++ D A+ + + DV+T E E++ Sbjct: 22 KMMAQSAQKMGYKVIVLDPNEDCPCRYVAHQFIHANYDDEQALNQLGENSDVVTYEFENI 81 Query: 503 DA 508 + Sbjct: 82 SS 83
>PUR6_YEAST (P21264) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 571 Score = 56.6 bits (135), Expect = 4e-08 Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCH--EHVVGSFSDGDAVREFAKRCDVLTVEIE 496 +M+ +AA+++ IK ILD ++ PA + + +HV GSFS+ + + A++CDVLT+EIE Sbjct: 16 RMIVEAANRLNIKTVILDA-ENSPAKQISNSNDHVNGSFSNPLDIEKLAEKCDVLTIEIE 74 Query: 497 HVDAVT 514 HVD T Sbjct: 75 HVDVPT 80
>PUR6_CANAL (Q92210) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 568 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSV--CHEHVVGSFSDGDAVREFAKRCDVLTVEIE 496 +M+ +AA ++ IK ILD K PA + +HV GSF++ D++ + A++ DVLTVEIE Sbjct: 16 RMIVEAAHRLNIKTVILDAAKS-PAKQINALDDHVDGSFTNYDSIVKLAEKADVLTVEIE 74 Query: 497 HVD 505 HVD Sbjct: 75 HVD 77
>PUR6_CANGA (O74197) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 570 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 2/63 (3%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCH--EHVVGSFSDGDAVREFAKRCDVLTVEIE 496 +M+ +AA+++ IK ILD + PA + + +HV GSF++ + + A +CDV+TVEIE Sbjct: 16 RMIVEAANRLNIKTLILDA-PNSPAKQITNASDHVDGSFANKEDIEALAAKCDVMTVEIE 74 Query: 497 HVD 505 HVD Sbjct: 75 HVD 77
>PURK_STAS1 (Q49WI9) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 375 Score = 52.0 bits (123), Expect = 1e-06 Identities = 24/62 (38%), Positives = 35/62 (56%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 KM+ Q+A QMG KV +LDP CP V +E + ++ D A+ DV+T E E++ Sbjct: 22 KMMAQSAQQMGYKVIVLDPNSSCPCQYVANEFINAAYDDQIALDRLGALSDVITYEFENI 81 Query: 503 DA 508 A Sbjct: 82 SA 83
>PUR6_SCHPO (P15567) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 552 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVC--HEHVVGSFSDGDAVREFAKRCDVLTVEIE 496 +M+ +AA ++ IK ILD PA + EH+ SF+D DA+ E +K+C +LT EIE Sbjct: 17 RMMVEAAHRLNIKCIILDAANS-PAKQIDGGREHIDASFTDPDAIVELSKKCTLLTTEIE 75 Query: 497 HVD 505 H++ Sbjct: 76 HIN 78
>PURK_BRUME (P52559) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 362 Score = 49.7 bits (117), Expect = 5e-06 Identities = 23/60 (38%), Positives = 35/60 (58%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 +ML AA++ G + IL+P CPA V + +V ++ D A+ E A DV+T E E+V Sbjct: 22 RMLAMAAARFGYETIILEPQAGCPAAQVANRQIVAAYDDPKALAELAAASDVITYEFENV 81
>PUR6_CRYNV (P0C017) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 582 Score = 48.5 bits (114), Expect = 1e-05 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 5/67 (7%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVC-----HEHVVGSFSDGDAVREFAKRCDVLTV 487 +ML A+ +GI + ILD PA H H G F+ +R+ A CD+LTV Sbjct: 17 RMLTHPAALLGIPLLILDSGSFTPAKQTLLPPPSHSHPDGPFTSEPHIRKLASACDILTV 76 Query: 488 EIEHVDA 508 EIEHV+A Sbjct: 77 EIEHVNA 83
>PUR6_CRYNE (Q5KGS6) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 582 Score = 48.5 bits (114), Expect = 1e-05 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 5/67 (7%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVC-----HEHVVGSFSDGDAVREFAKRCDVLTV 487 +ML A+ +GI + ILD PA H H G F+ +R+ A CD+LTV Sbjct: 17 RMLTHPAALLGIPLLILDSGSYTPAKQTLLPPPPHSHPDGPFTSETHIRKLASACDILTV 76 Query: 488 EIEHVDA 508 EIEHV+A Sbjct: 77 EIEHVNA 83
>PURK_SYNY3 (P74724) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 388 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/60 (36%), Positives = 38/60 (63%) Frame = +2 Query: 326 MLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHVD 505 M+ Q A ++G+K+A+ P + PA ++ + V+ + +DG+ RE A+ C V+T E E VD Sbjct: 19 MMAQEAPRLGLKLAVQTPGESDPAVALADKVVLTAIADGEGTRELAEHCGVITFENEFVD 78
>PURK_MYCTU (P65898) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 429 Score = 38.9 bits (89), Expect = 0.008 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 +M QAA +G + +L D PA V V+GS +D A+R A DVLT + EHV Sbjct: 30 RMTHQAAIALGQNLRVLVTSADDPAAQVTPNVVIGSHTDLAALRRVAAGADVLTFDHEHV 89
>PURK_MYCBO (P65899) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 429 Score = 38.9 bits (89), Expect = 0.008 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 +M QAA +G + +L D PA V V+GS +D A+R A DVLT + EHV Sbjct: 30 RMTHQAAIALGQNLRVLVTSADDPAAQVTPNVVIGSHTDLAALRRVAAGADVLTFDHEHV 89
>PURK_MYCLE (P46701) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 439 Score = 37.0 bits (84), Expect = 0.032 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 +M QAA +G + +L D PA V + V+GS +D + +R A D LT + EHV Sbjct: 26 RMTHQAAIALGQTLRVLATAADEPAAQVTPDVVIGSHTDLEDLRRVALGADALTFDHEHV 85
>PURT_PASHA (P46927) Probable phosphoribosylglycinamide formyltransferase 2 (EC| 2.1.2.-) (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (Membrane protein antigen 1) Length = 392 Score = 31.6 bits (70), Expect = 1.3 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 350 MGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFA--KRCDVLTVEIEHVDAVT 514 +G++V +D + PA V H S DG+A+R+ ++ D + E+E + T Sbjct: 34 LGVEVIAVDRYDNAPAQQVAHRAYTISMLDGNALRDLVEKEKPDFIVPEVEAIATAT 90
>PURK_CORAM (Q44678) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 413 Score = 31.6 bits (70), Expect = 1.3 Identities = 16/60 (26%), Positives = 32/60 (53%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 +M+ AA ++G + +L +D A VC + V+G +++ D + + +T + EHV Sbjct: 35 RMMQTAAIELGQSLRLLAGARDASAAQVCADVVLGDYTNYDDLLKAVDGATAVTFDHEHV 94
>PURK_AQUAE (O66608) Phosphoribosylaminoimidazole carboxylase ATPase subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 365 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +2 Query: 347 QMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKRCDVLTVEIEHV 502 ++G K +L+ ++ PA V F G + EF CD++T E EH+ Sbjct: 22 KLGFKFHVLEDKENAPACRVADR----CFRTGQ-ISEFVDSCDIITYEFEHI 68
>PURT_ECOLI (P33221) Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)| (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) Length = 391 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 347 QMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVR 454 ++G++V +D D PA V H V + DGDA+R Sbjct: 32 RLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALR 67
>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)| Length = 873 Score = 29.6 bits (65), Expect = 5.1 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -3 Query: 364 HFDPHLTRRLAEHLPQLAAPQHPDDPIGHAMH 269 H PHL+R ++ H L +P H P+G +H Sbjct: 708 HLSPHLSR-MSPHATSLGSPHHGVTPLGTPLH 738
>SYB_LOLPE (P47194) Synaptobrevin| Length = 125 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +1 Query: 313 PVGEDALPGGESDG--DQSGHPGPPQGLPRELRLSR 414 P A PGG G G PGPPQG P+ ++ S+ Sbjct: 4 PQNPQAGPGGPPSGPPQPGGPPGPPQGPPQPVQQSK 39
>DCP1B_PONPY (Q5R413) mRNA decapping enzyme 1B (EC 3.-.-.-)| Length = 609 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHE---HVVGSFSDG 442 K LC A ++ ++ A L PL + P N C H G F G Sbjct: 285 KQLCPAIQKLMVRSADLHPLSELPENRPCENGSTHSAGEFFTG 327
>NIRA_EMENI (P28348) Nitrogen assimilation transcription factor nirA| Length = 892 Score = 29.3 bits (64), Expect = 6.7 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Frame = +3 Query: 348 RWGSKWPSW----TPSRTAPRTPSVTSMSWGASVMVTRSVSLRRG 470 RWGS W W +PS T+ PSV+S S A+ +++ VS G Sbjct: 641 RWGS-WGPWDQAASPSTTSDSPPSVSSQSVVATTDLSQPVSQSAG 684
>DCP1B_HUMAN (Q8IZD4) mRNA decapping enzyme 1B (EC 3.-.-.-)| Length = 618 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +2 Query: 323 KMLCQAASQMGIKVAILDPLKDCPANSVCHE---HVVGSFSDG 442 K LC A ++ ++ A L PL + P N C H G F G Sbjct: 289 KQLCPAIQKLMVRSADLHPLSELPENRPCENGSTHSAGEFFTG 331
>CT160_HUMAN (Q9NUG4) Protein C20orf160| Length = 571 Score = 29.3 bits (64), Expect = 6.7 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +1 Query: 313 PVGEDALPGGESDGDQSGHPGPPQGLPRELRLSRACR 423 P G DA PGG PGPP G P + R+ A R Sbjct: 163 PAGVDASPGGAGRD-----PGPPGGAPEKRRVGTAER 194
>ADEC_ARCFU (O29999) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)| Length = 556 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = -3 Query: 463 RKLTDRVTITEAPHDMLVTDGVRGAVLEGVQDGHFDPHLTRRLAEHLPQLAAPQ 302 R L +T H MLVTDG R +V + +++G+ D R + E + ++ A Q Sbjct: 249 RNLVALKGLTGNRHTMLVTDGDR-SVKDIIEEGYLDHVFRRAIEEGIDEIKALQ 301
>BMP5_HUMAN (P22003) Bone morphogenetic protein 5 precursor (BMP-5)| Length = 454 Score = 28.9 bits (63), Expect = 8.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 Query: 343 ESDGDQSGHPGPPQGLPRELRLSR 414 E+ G + G+P P G PR ++LSR Sbjct: 108 ETRGARKGYPASPNGYPRRIQLSR 131
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = +1 Query: 313 PVGEDALPGGESDGDQSGHPGP--PQGLP 393 PVGE LPG Q G PGP P GLP Sbjct: 1415 PVGEQGLPGA---AGQDGPPGPMGPPGLP 1440
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Frame = +1 Query: 319 GEDALPGGESDGDQSGHPGP--PQGLP 393 G D LPG + D +G PGP P GLP Sbjct: 790 GLDGLPGPKGDVGPNGQPGPMGPPGLP 816
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = +1 Query: 313 PVGEDALPGGESDGDQSGHPGP--PQGLP 393 PVGE LPG Q G PGP P GLP Sbjct: 1413 PVGEQGLPGA---AGQDGPPGPLGPPGLP 1438
>PURT_METJA (Q58881) Probable phosphoribosylglycinamide formyltransferase 2 (EC| 2.1.2.-) (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) Length = 393 Score = 28.9 bits (63), Expect = 8.7 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 341 ASQMGIKVAILDPLKDCPANSVCHEHVVGSFSDGDAVREFAKR--CDVLTVEIEHVD 505 A ++GI+ +D ++ PA V H+ V D DA+ +R D + EIE ++ Sbjct: 34 AQRLGIECIAVDRYQNAPAMQVAHKSYVIDMKDYDALMAIIEREEPDYIVPEIEAIN 90
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = +1 Query: 313 PVGEDALPGGESDGDQSGHPGP--PQGLP 393 PVGE LPG Q G PGP P GLP Sbjct: 91 PVGEQGLPGA---AGQDGPPGPLGPPGLP 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,534,560 Number of Sequences: 219361 Number of extensions: 840783 Number of successful extensions: 4450 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3436 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4432 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
