| Clone Name | bart06b11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ290421.1|HVU290421 Hordeum vulgare mRNA for BAX inhibitor 1 (pBI-1 gene) Length = 744 Score = 731 bits (369), Expect = 0.0 Identities = 369/369 (100%) Strand = Plus / Plus Query: 80 atggacgccttctactcgacctcgtcggcggcggcgagcggctggggccacgactccctc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggacgccttctactcgacctcgtcggcggcggcgagcggctggggccacgactccctc 60 Query: 140 aagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgtttacctgact 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgtttacctgact 120 Query: 200 ctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgccctgaacatc 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgccctgaacatc 180 Query: 260 ggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgttctcggtgcca 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgttctcggtgcca 240 Query: 320 gtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcctggaaggggct 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcctggaaggggct 300 Query: 380 tcggttggacctctgattgagcttgccatagactttgacccaagcatcctcgtgacaggg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcggttggacctctgattgagcttgccatagactttgacccaagcatcctcgtgacaggg 360 Query: 440 tttgtcgga 448 ||||||||| Sbjct: 361 tttgtcgga 369
>emb|AJ278816.1|HVU278816 Hordeum vulgare partial mRNA for putative BAX inhibitor 1 (pBI-1 gene) Length = 438 Score = 696 bits (351), Expect = 0.0 Identities = 351/351 (100%) Strand = Plus / Plus Query: 98 acctcgtcggcggcggcgagcggctggggccacgactccctcaagaacttccgccagatc 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acctcgtcggcggcggcgagcggctggggccacgactccctcaagaacttccgccagatc 60 Query: 158 tcccccgccgtgcagtcccacctcaagctcgtttacctgactctatgctttgcactggcc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcccccgccgtgcagtcccacctcaagctcgtttacctgactctatgctttgcactggcc 120 Query: 218 tcatctgccgtgggtgcttacctacacattgccctgaacatcggcgggatgctgacaatg 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcatctgccgtgggtgcttacctacacattgccctgaacatcggcgggatgctgacaatg 180 Query: 278 ctcgcttgtgtcggaactatcgcctggatgttctcggtgccagtctatgaggagaggaag 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctcgcttgtgtcggaactatcgcctggatgttctcggtgccagtctatgaggagaggaag 240 Query: 338 aggtttgggctgctgatgggtgcagccctcctggaaggggcttcggttggacctctgatt 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aggtttgggctgctgatgggtgcagccctcctggaaggggcttcggttggacctctgatt 300 Query: 398 gagcttgccatagactttgacccaagcatcctcgtgacagggtttgtcgga 448 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gagcttgccatagactttgacccaagcatcctcgtgacagggtttgtcgga 351
>ref|XM_463954.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 285 bits (144), Expect = 6e-74 Identities = 311/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 28 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 87 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 88 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 147 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 148 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 207 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 208 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 267 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 268 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 327 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| || Sbjct: 328 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaagcattct 387 Query: 430 cgtgacag 437 ||| |||| Sbjct: 388 cgtaacag 395
>ref|XM_507433.1| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.1-1 mRNA Length = 1168 Score = 285 bits (144), Expect = 6e-74 Identities = 311/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 139 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 198 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 199 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 258 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 259 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 318 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 319 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 378 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 379 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 438 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| || Sbjct: 439 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaagcattct 498 Query: 430 cgtgacag 437 ||| |||| Sbjct: 499 cgtaacag 506
>ref|XM_506699.2| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.1-1 mRNA Length = 1193 Score = 285 bits (144), Expect = 6e-74 Identities = 311/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 150 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 209 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 210 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 269 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 270 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 329 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 330 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 389 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 390 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 449 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| || Sbjct: 450 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaagcattct 509 Query: 430 cgtgacag 437 ||| |||| Sbjct: 510 cgtaacag 517
>dbj|AB025926.3| Oryza sativa BI-1 mRNA for Bax inhibitor-1, complete cds Length = 1181 Score = 285 bits (144), Expect = 6e-74 Identities = 311/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 125 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 184 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 185 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 244 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 245 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 304 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 305 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 364 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 365 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 424 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| || Sbjct: 425 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaagcattct 484 Query: 430 cgtgacag 437 ||| |||| Sbjct: 485 cgtaacag 492
>dbj|AK101060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022C21, full insert sequence Length = 1193 Score = 285 bits (144), Expect = 6e-74 Identities = 311/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 150 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 209 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 210 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 269 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 270 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 329 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 330 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 389 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 390 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 449 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| || Sbjct: 450 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaagcattct 509 Query: 430 cgtgacag 437 ||| |||| Sbjct: 510 cgtaacag 517
>dbj|AK061564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E05, full insert sequence Length = 1071 Score = 285 bits (144), Expect = 6e-74 Identities = 311/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 28 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 87 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 88 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 147 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 148 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 207 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 208 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 267 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 268 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 327 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| || Sbjct: 328 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaagcattct 387 Query: 430 cgtgacag 437 ||| |||| Sbjct: 388 cgtaacag 395
>dbj|AK061953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F03, full insert sequence Length = 1168 Score = 278 bits (140), Expect = 1e-71 Identities = 310/368 (84%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 139 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 198 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 199 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 258 Query: 190 ttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattgc 249 ||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | || Sbjct: 259 ttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtcgc 318 Query: 250 cctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgtt 309 | ||||||||||||||||| |||| ||||||| || || || | ||||||||| |||| Sbjct: 319 cttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttgtt 378 Query: 310 ctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcct 369 ||||||||| |||| |||||||||||||||||||||| | || ||| || ||||| || Sbjct: 379 ctcggtgcctgtctttgaggagaggaagaggtttgggattctcttggccgctgccctgct 438 Query: 370 ggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcct 429 |||||||||||| ||||| |||||||| ||||||| ||||||||||| ||| ||| || Sbjct: 439 ggaaggggcttcagttgggcctctgatcaagcttgctgtagactttgactcaaacattct 498 Query: 430 cgtgacag 437 ||| |||| Sbjct: 499 cgtaacag 506
>gb|AY105656.1| Zea mays PCO153521 mRNA sequence Length = 1096 Score = 220 bits (111), Expect = 3e-54 Identities = 258/307 (84%) Strand = Plus / Plus Query: 129 acgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcg 188 ||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||| Sbjct: 139 acgactcgctcaagaacttccgccagatcacccccgccgtccagacccacctcaagctcg 198 Query: 189 tttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacattg 248 | ||||| || || ||| || |||||||| || || ||||| |||||||| ||| | | Sbjct: 199 tctacctcaccctgtgcgcggcgctggcctcgtcggcggtgggcgcttacctgcacgtgg 258 Query: 249 ccctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatgt 308 | |||||||||||| | |||||||||||||| ||| ||||| | ||||||||| | | Sbjct: 259 tctggaacatcggcggtacgctgacaatgctcggttgcgtcggcagcatcgcctggctct 318 Query: 309 tctcggtgccagtctatgaggagaggaagaggtttgggctgctgatgggtgcagccctcc 368 |||||||||| ||||| |||||||||||||||| |||||||||||||| || ||||||| Sbjct: 319 tctcggtgcccgtctacgaggagaggaagaggtatgggctgctgatggcggctgccctcc 378 Query: 369 tggaaggggcttcggttggacctctgattgagcttgccatagactttgacccaagcatcc 428 ||||||| |||||||| ||||| || | |||| ||| | || |||||||||||||||| Sbjct: 379 tggaaggcgcttcggtcggacccctcgtcaagctcgccgtggaatttgacccaagcatcc 438 Query: 429 tcgtgac 435 | ||||| Sbjct: 439 tggtgac 445
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 6e-31 Identities = 107/120 (89%), Gaps = 9/120 (7%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 1327070 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 1327129 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1327130 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 1327189 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 188 gtttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacatt 247 ||||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | Sbjct: 1328060 gtttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtc 1328119 Query: 248 gccctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatg 307 ||| ||||||||||||||||| |||| ||||||| || || || | ||||||||| || Sbjct: 1328120 gccttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttg 1328179 Query: 308 ttctcggtgccagtctatgaggag 331 ||||||||||| |||| ||||||| Sbjct: 1328180 ttctcggtgcctgtctttgaggag 1328203 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 325 tgaggagaggaagaggtttgggctgctgatgggtgcagccctcctggaaggggcttcggt 384 |||| ||||||||||||||||| | || ||| || ||||| |||||||||||||| || Sbjct: 1328333 tgagcagaggaagaggtttgggattctcttggccgctgccctgctggaaggggcttcagt 1328392 Query: 385 tggacctctgattgagcttgccatagactttgacccaag 423 ||| |||||||| ||||||| ||||||||||| |||| Sbjct: 1328393 tgggcctctgatcaagcttgctgtagactttgactcaag 1328431 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cgacgcgcaggcgcaggcgcaggg 79 |||||||||| ||||||||||||| Sbjct: 34595540 cgacgcgcagtcgcaggcgcaggg 34595563 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cgtcggcggcggcgagcggc 121 |||||||||||||||||||| Sbjct: 17675092 cgtcggcggcggcgagcggc 17675073
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 143 bits (72), Expect = 6e-31 Identities = 107/120 (89%), Gaps = 9/120 (7%) Strand = Plus / Plus Query: 79 gatggacgccttctactcgacctcgtcggcg---------gcggcgagcggctggggcca 129 ||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 8342 gatggacgccttctactcgacctcgtcggcgtacggagcggcggcgagcggctggggcta 8401 Query: 130 cgactccctcaagaacttccgccagatctcccccgccgtgcagtcccacctcaagctcgt 189 |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 8402 cgactcgctgaagaacttccgccagatctcccccgccgtccagtcccacctcaagctcgt 8461 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 188 gtttacctgactctatgctttgcactggcctcatctgccgtgggtgcttacctacacatt 247 ||||||||||| |||||| | || ||||| | || || ||||| || ||||| ||| | Sbjct: 9332 gtttacctgacactatgcgtcgccctggctgcgtcggcggtgggcgcatacctgcacgtc 9391 Query: 248 gccctgaacatcggcgggatgctgacaatgctcgcttgtgtcggaactatcgcctggatg 307 ||| ||||||||||||||||| |||| ||||||| || || || | ||||||||| || Sbjct: 9392 gccttgaacatcggcgggatgttgactatgctcgggtgcgtggggagcatcgcctggttg 9451 Query: 308 ttctcggtgccagtctatgaggag 331 ||||||||||| |||| ||||||| Sbjct: 9452 ttctcggtgcctgtctttgaggag 9475 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 325 tgaggagaggaagaggtttgggctgctgatgggtgcagccctcctggaaggggcttcggt 384 |||| ||||||||||||||||| | || ||| || ||||| |||||||||||||| || Sbjct: 9605 tgagcagaggaagaggtttgggattctcttggccgctgccctgctggaaggggcttcagt 9664 Query: 385 tggacctctgattgagcttgccatagactttgacccaag 423 ||| |||||||| ||||||| ||||||||||| |||| Sbjct: 9665 tgggcctctgatcaagcttgctgtagactttgactcaag 9703
>ref|XM_463955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 555 Score = 123 bits (62), Expect = 5e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 296 atcgcctggatgttctcggtgccagtctatgaggagaggaagaggtttgggctgctgatg 355 ||||||||| ||||||||||||| |||| |||||||||||||||||||||| | || || Sbjct: 31 atcgcctggttgttctcggtgcctgtctttgaggagaggaagaggtttgggattctcttg 90 Query: 356 ggtgcagccctcctggaaggggcttcggttggacctctgattgagcttgccatagacttt 415 | || ||||| |||||||||||||| ||||| |||||||| ||||||| |||||||| Sbjct: 91 gccgctgccctgctggaaggggcttcagttgggcctctgatcaagcttgctgtagacttt 150 Query: 416 gacccaagcatcctcgtgacag 437 ||| ||||||| ||||| |||| Sbjct: 151 gactcaagcattctcgtaacag 172
>gb|BT018201.1| Zea mays clone EL01N0559D10.c mRNA sequence Length = 1127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 330 agaggaagaggtttgggctgctgatgggtgcagccctcctggaaggggcttcggttggac 389 |||||||||||| | ||||||||||| || |||||||||||||| |||||||| |||| Sbjct: 32 agaggaagaggtacgtgctgctgatggcggctgccctcctggaaggcgcttcggtcggac 91 Query: 390 c 390 | Sbjct: 92 c 92
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcgag 117 |||||||||||||||||||||| Sbjct: 738498 cgacctcgtcggcggcggcgag 738477
>ref|XM_481132.1| Oryza sativa (japonica cultivar-group), mRNA Length = 843 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 ctcgacctcgtcggcggcggcgagc 118 |||||||||| |||||||||||||| Sbjct: 305 ctcgacctcgccggcggcggcgagc 281
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 gcgcaggcgcaggcgcaggga 80 ||||||||||||||||||||| Sbjct: 2163124 gcgcaggcgcaggcgcaggga 2163144
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgacctcgtcggcggcggcg 115 ||||||||||||||||||||| Sbjct: 116796 tcgacctcgtcggcggcggcg 116776
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gcgcaggcgcaggcgcaggga 80 ||||||||||||||||||||| Sbjct: 42304 gcgcaggcgcaggcgcaggga 42284
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 gcctggatgttctcggtgcca 319 ||||||||||||||||||||| Sbjct: 137122 gcctggatgttctcggtgcca 137102
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gcgcaggcgcaggcgcaggga 80 ||||||||||||||||||||| Sbjct: 22447057 gcgcaggcgcaggcgcaggga 22447037 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 33879318 cgcgcaggcgcaggcgcagg 33879337
>gb|AC099735.47| Mus musculus chromosome 1, clone RP23-218I9, complete sequence Length = 207768 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 cgcgcaggcgcaggcgcaggg 79 ||||||||||||||||||||| Sbjct: 106809 cgcgcaggcgcaggcgcaggg 106789
>gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine protease CP1 mRNA, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgacctcgtcggcggcggcg 115 ||||||||||||||||||||| Sbjct: 379 tcgacctcgtcggcggcggcg 359
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 acgcgcaggcgcaggcgcagg 78 ||||||||||||||||||||| Sbjct: 1646596 acgcgcaggcgcaggcgcagg 1646616
>gb|AC019153.13| Mus musculus chromosome 2 clone RP23-286D16, complete sequence Length = 195068 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 agccctcctggaaggggcttc 381 ||||||||||||||||||||| Sbjct: 101506 agccctcctggaaggggcttc 101526
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctcgtcggcggcggcgagcg 119 ||||||||||||||||||||| Sbjct: 314963 cctcgtcggcggcggcgagcg 314943
>gb|AC159966.5| Mus musculus chromosome 1, clone RP23-287P12, complete sequence Length = 208142 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 cgcgcaggcgcaggcgcaggg 79 ||||||||||||||||||||| Sbjct: 14674 cgcgcaggcgcaggcgcaggg 14654
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgacctcgtcggcggcggcg 115 ||||||||||||||||||||| Sbjct: 54947 tcgacctcgtcggcggcggcg 54927
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctcgtcggcggcggcgagcg 119 ||||||||||||||||||||| Sbjct: 2359326 cctcgtcggcggcggcgagcg 2359346 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tcggcggcggcgagcggctg 123 |||||||||||||||||||| Sbjct: 4109211 tcggcggcggcgagcggctg 4109230
>dbj|AK082339.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230039F11 product:unclassifiable, full insert sequence Length = 2240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 gcctggatgttctcggtgcca 319 ||||||||||||||||||||| Sbjct: 123 gcctggatgttctcggtgcca 103
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ctcgacctcgtcggcggcggcgagc 118 |||||||||| |||||||||||||| Sbjct: 10130984 ctcgacctcgccggcggcggcgagc 10131008
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cctcgtcggcggcggcgagcggctg 123 |||||| |||||||||||||||||| Sbjct: 29893071 cctcgtaggcggcggcgagcggctg 29893047 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 11330716 cgacctcgtcggcggcggcg 11330697 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgacctcgtcggcggcggcgag 117 |||||| ||||||||||||||||| Sbjct: 6567626 ctcgacatcgtcggcggcggcgag 6567603 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 1782821 cgcgcaggcgcaggcgcagg 1782840
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgacctcgtcggcggcggcg 115 ||||||||||||||||||||| Sbjct: 455149 tcgacctcgtcggcggcggcg 455129 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 acctcgtcggcggcggcgag 117 |||||||||||||||||||| Sbjct: 10688735 acctcgtcggcggcggcgag 10688716
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gcgcaggcgcaggcgcaggga 80 ||||||||||||||||||||| Sbjct: 22440086 gcgcaggcgcaggcgcaggga 22440066 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 33969790 cgcgcaggcgcaggcgcagg 33969809
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cctcgtcggcggcggcgagcggctg 123 |||||| |||||||||||||||||| Sbjct: 88584 cctcgtaggcggcggcgagcggctg 88560
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ctcgacctcgtcggcggcggcgagc 118 |||||||||| |||||||||||||| Sbjct: 90330 ctcgacctcgccggcggcggcgagc 90354
>dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G09, full insert sequence Length = 1409 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgacctcgtcggcggcggcg 115 ||||||||||||||||||||| Sbjct: 437 tcgacctcgtcggcggcggcg 417
>dbj|AK067426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107M14, full insert sequence Length = 2189 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cctcgtcggcggcggcgagcggctg 123 |||||| |||||||||||||||||| Sbjct: 286 cctcgtaggcggcggcgagcggctg 262
>gb|AY107681.1| Zea mays PCO116018 mRNA sequence Length = 978 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 atctcccccgccgtgcagtcccacctcaa 183 ||||| ||||| ||||||||||||||||| Sbjct: 153 atctcacccgctgtgcagtcccacctcaa 181
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ttcgacgcgcaggcgcaggcg 74 ||||||||||||||||||||| Sbjct: 1155758 ttcgacgcgcaggcgcaggcg 1155738
>emb|BX004793.12| Mouse DNA sequence from clone RP23-188D9 on chromosome 2, complete sequence Length = 161514 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 agccctcctggaaggggcttc 381 ||||||||||||||||||||| Sbjct: 95562 agccctcctggaaggggcttc 95542
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cggcggcggcgagcggctggg 125 ||||||||||||||||||||| Sbjct: 1624085 cggcggcggcgagcggctggg 1624105
>ref|XM_550608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 531 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 111 cgcgcaggcgcaggcgcagg 130
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acgcgcaggcgcaggcgcag 77 |||||||||||||||||||| Sbjct: 134511 acgcgcaggcgcaggcgcag 134530
>ref|NM_001003352.1| Canis familiaris neurofilament, heavy polypeptide 200kDa (NEFH), mRNA Length = 4099 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 808 cgcgcaggcgcaggcgcagg 827
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tcgacgcgcaggcgcaggcg 74 |||||||||||||||||||| Sbjct: 1062072 tcgacgcgcaggcgcaggcg 1062091
>ref|XM_473828.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2673 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actcgacctcgtcggcggcg 112 |||||||||||||||||||| Sbjct: 78 actcgacctcgtcggcggcg 97
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 acctcgtcggcggcggcgag 117 |||||||||||||||||||| Sbjct: 73335 acctcgtcggcggcggcgag 73316
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 103037 cgcgcaggcgcaggcgcagg 103056
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 13502 gcgcaggcgcaggcgcaggg 13521
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 92401 gcgcaggcgcaggcgcaggg 92420
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tcgacctcgtcggcggcggcgagc 118 |||||| ||||||||||||||||| Sbjct: 1832802 tcgaccgcgtcggcggcggcgagc 1832779
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cggcggcggcgagcggctgg 124 |||||||||||||||||||| Sbjct: 133105 cggcggcggcgagcggctgg 133086
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgtcggcggcggcgagcggc 121 |||||||||||||||||||| Sbjct: 1083096 cgtcggcggcggcgagcggc 1083115
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 2205320 cgcgcaggcgcaggcgcagg 2205339
>gb|AF453320.1| Brassica oleracea bax inhibitor-like protein (BI1) mRNA, complete cds Length = 1013 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 413 tttgacccaagcatcctcgtgacagggtttgtcgga 448 |||||||||||||||||| | || | |||||||||| Sbjct: 354 tttgacccaagcatcctcatcactgcgtttgtcgga 389
>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence, complete sequence Length = 27024 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 13520 cgcgcaggcgcaggcgcagg 13539
>gb|AF274858.3| Homo sapiens chromosome X clone RP11-54I20, RP11-66N11 map q28, complete sequence Length = 191983 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 158715 cgcgcaggcgcaggcgcagg 158734
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgtcggcggcggcgagcggc 121 |||||||||||||||||||| Sbjct: 2400581 cgtcggcggcggcgagcggc 2400600
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 acctcgtcggcggcggcgag 117 |||||||||||||||||||| Sbjct: 82331 acctcgtcggcggcggcgag 82350
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actcgacctcgtcggcggcg 112 |||||||||||||||||||| Sbjct: 93224 actcgacctcgtcggcggcg 93243
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cggcggcgagcggctggggc 127 |||||||||||||||||||| Sbjct: 1329058 cggcggcgagcggctggggc 1329039
>gb|AE005722.1| Caulobacter crescentus CB15 section 48 of 359 of the complete genome Length = 12112 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 ctcgacctcgtcggcggcggcgagcggc 121 |||||||| |||||||||||||| |||| Sbjct: 6267 ctcgacctggtcggcggcggcgaccggc 6240
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ggcggcggcgagcggctggg 125 |||||||||||||||||||| Sbjct: 82749 ggcggcggcgagcggctggg 82768
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ttgcactggcctcatctgcc 226 |||||||||||||||||||| Sbjct: 163195 ttgcactggcctcatctgcc 163176
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcgagcg 119 ||||||| |||||||||||||||| Sbjct: 366487 cgacctcctcggcggcggcgagcg 366464
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcgagcg 119 |||||||| ||||||||||||||| Sbjct: 1029126 cgacctcgccggcggcggcgagcg 1029149
>dbj|AK028630.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732420K15 product:unclassifiable, full insert sequence Length = 2826 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 439 cgcgcaggcgcaggcgcagg 420
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cgtcggcggcggcgagcggc 121 |||||||||||||||||||| Sbjct: 414737 cgtcggcggcggcgagcggc 414718
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actcgacctcgtcggcggcg 112 |||||||||||||||||||| Sbjct: 30825702 actcgacctcgtcggcggcg 30825721
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 19170509 cgacctcgtcggcggcggcg 19170490 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 16549919 gcgcaggcgcaggcgcaggg 16549900
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cggcggcggcgagcggctgg 124 |||||||||||||||||||| Sbjct: 19650030 cggcggcggcgagcggctgg 19650011 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcgtcggcggcggcgagcgg 120 |||||||||||||||||||| Sbjct: 18826741 tcgtcggcggcggcgagcgg 18826760 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 14402776 cgacctcgtcggcggcggcg 14402795
>gb|AF346625.1| Canis familiaris heavy neurofilament protein (NFH) mRNA, NFH-C allele, complete cds Length = 4099 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 808 cgcgcaggcgcaggcgcagg 827
>gb|AC026359.25| Homo sapiens 3 BAC RP11-462A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 78848 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgccatagactttgacccaa 422 |||||||||||||||||||| Sbjct: 45425 tgccatagactttgacccaa 45444
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcgtcggcggcggcgagcg 119 |||||||||||||||||||| Sbjct: 1570350 ctcgtcggcggcggcgagcg 1570331
>gb|AF390556.1| Nicotiana tabacum Bax inhibitor 1 (BI-1) mRNA, complete cds Length = 1293 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aagaacttccgccagatctc 159 |||||||||||||||||||| Sbjct: 206 aagaacttccgccagatctc 225
>gb|AF390555.1| Brassica napus Bax inhibitor 1 (BI-1) mRNA, complete cds Length = 1010 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 413 tttgacccaagcatcctcgtgacagggtttgtcgga 448 |||||||||||||||||| | || | |||||||||| Sbjct: 377 tttgacccaagcatcctcatcactgcgtttgtcgga 412
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 887424 cgcgcaggcgcaggcgcagg 887443
>emb|AL772151.17| Mouse DNA sequence from clone RP23-320C6 on chromosome 4, complete sequence Length = 128073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tatgaggagaggaagaggtt 342 |||||||||||||||||||| Sbjct: 102769 tatgaggagaggaagaggtt 102788
>gb|AC011648.12| Homo sapiens chromosome 15, clone RP11-15F13, complete sequence Length = 107336 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ttgcactggcctcatctgcc 226 |||||||||||||||||||| Sbjct: 93303 ttgcactggcctcatctgcc 93322
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 107970 cgcgcaggcgcaggcgcagg 107989
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 1290847 cgacctcgtcggcggcggcg 1290828
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 18425 cgacctcgtcggcggcggcg 18406
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgacctcgtcggcggcggcgag 117 |||||| ||||||||||||||||| Sbjct: 1752 ctcgacatcgtcggcggcggcgag 1729
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgacctcgtcggcggcggcgag 117 |||||| ||||||||||||||||| Sbjct: 84002 ctcgacatcgtcggcggcggcgag 83979
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 94579 cgacctcgtcggcggcggcg 94598
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 2341 cgacctcgtcggcggcggcg 2360
>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0021C10 Length = 119527 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cgtcggcggcggcgagcggc 121 |||||||||||||||||||| Sbjct: 31106 cgtcggcggcggcgagcggc 31087
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cgacgcgcaggcgcaggcgcaggg 79 |||||||||| ||||||||||||| Sbjct: 106480 cgacgcgcagtcgcaggcgcaggg 106503
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cgacgcgcaggcgcaggcgcaggg 79 |||||||||| ||||||||||||| Sbjct: 62155 cgacgcgcagtcgcaggcgcaggg 62178
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cggcggcggcgagcggctgg 124 |||||||||||||||||||| Sbjct: 59512 cggcggcggcgagcggctgg 59493
>dbj|AK121814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098G21, full insert sequence Length = 3219 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actcgacctcgtcggcggcg 112 |||||||||||||||||||| Sbjct: 50 actcgacctcgtcggcggcg 69
>dbj|AK120829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019H02, full insert sequence Length = 2844 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 261 gcgcaggcgcaggcgcaggg 280
>dbj|AK120604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150B18, full insert sequence Length = 1871 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 913 cgacctcgtcggcggcggcg 932
>dbj|AK120576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C24, full insert sequence Length = 2233 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcgtcggcggcggcgagcgg 120 |||||||||||||||||||| Sbjct: 1181 tcgtcggcggcggcgagcgg 1162
>dbj|AK110290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-F11, full insert sequence Length = 2399 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tcgacgcgcaggcgcaggcg 74 |||||||||||||||||||| Sbjct: 212 tcgacgcgcaggcgcaggcg 231
>dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D01, full insert sequence Length = 2836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcgtcggcggcggcgagcgg 120 |||||||||||||||||||| Sbjct: 180 tcgtcggcggcggcgagcgg 161
>dbj|AK107270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H11, full insert sequence Length = 1608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 acctcgtcggcggcggcgag 117 |||||||||||||||||||| Sbjct: 958 acctcgtcggcggcggcgag 977
>dbj|AK107218.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C12, full insert sequence Length = 1561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 acctcgtcggcggcggcgag 117 |||||||||||||||||||| Sbjct: 955 acctcgtcggcggcggcgag 974
>dbj|AK102614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099D18, full insert sequence Length = 1868 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 913 cgacctcgtcggcggcggcg 932
>dbj|AK071601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102C01, full insert sequence Length = 799 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgacctcgtcggcggcggcgag 117 |||||| ||||||||||||||||| Sbjct: 114 ctcgacatcgtcggcggcggcgag 91
>dbj|AK067156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098A10, full insert sequence Length = 2697 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cgtcggcggcggcgagcggc 121 |||||||||||||||||||| Sbjct: 184 cgtcggcggcggcgagcggc 165
>gb|AC122193.5| Mus musculus BAC clone RP23-45G16 from 6, complete sequence Length = 211512 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 107427 cgcgcaggcgcaggcgcagg 107408
>dbj|AK064671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E03, full insert sequence Length = 1744 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 acctcgtcggcggcggcgag 117 |||||||||||||||||||| Sbjct: 957 acctcgtcggcggcggcgag 976
>emb|BX784029.5| Zebrafish DNA sequence from clone DKEY-21H14 in linkage group 4, complete sequence Length = 219903 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tatgaggagaggaagaggtt 342 |||||||||||||||||||| Sbjct: 185364 tatgaggagaggaagaggtt 185345
>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full insert sequence Length = 1752 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 29 cgacctcgtcggcggcggcg 10
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin Length = 107379 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 actcgacctcgtcggcggcg 112 |||||||||||||||||||| Sbjct: 84324 actcgacctcgtcggcggcg 84305 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actcgacctcgtcggcggcg 112 |||||||||||||||||||| Sbjct: 33640 actcgacctcgtcggcggcg 33659
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acgcgcaggcgcaggcgcag 77 |||||||||||||||||||| Sbjct: 1861708 acgcgcaggcgcaggcgcag 1861727
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgcgcaggcgcaggcgcagg 78 |||||||||||||||||||| Sbjct: 3301031 cgcgcaggcgcaggcgcagg 3301012
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cggcggcggcgagcggctgg 124 |||||||||||||||||||| Sbjct: 3320668 cggcggcggcgagcggctgg 3320649
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 19096736 cgacctcgtcggcggcggcg 19096717 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 16503152 gcgcaggcgcaggcgcaggg 16503133
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 55470 cgacctcgtcggcggcggcg 55489
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacctcgtcggcggcggcg 115 |||||||||||||||||||| Sbjct: 3839 cgacctcgtcggcggcggcg 3820
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 23871 gcgcaggcgcaggcgcaggg 23890
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgcaggcgcaggcgcaggg 79 |||||||||||||||||||| Sbjct: 120847 gcgcaggcgcaggcgcaggg 120866
>emb|BX005452.7| Mouse DNA sequence from clone RP23-158K12 on chromosome X, complete sequence Length = 167118 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agtctatgaggagaggaaga 338 |||||||||||||||||||| Sbjct: 15483 agtctatgaggagaggaaga 15502
>emb|AL672076.10| Mouse DNA sequence from clone RP23-161N17 on chromosome 4, complete sequence Length = 208396 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acgcgcaggcgcaggcgcag 77 |||||||||||||||||||| Sbjct: 137949 acgcgcaggcgcaggcgcag 137968 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,213,078 Number of Sequences: 3902068 Number of extensions: 3213078 Number of successful extensions: 81736 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76608 Number of HSP's gapped (non-prelim): 5105 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)