>Y5621_ARATH (O81488) PHD finger protein At5g26210|
          Length = 255

 Score =  120 bits (301), Expect = 9e-28
 Identities = 54/71 (76%), Positives = 61/71 (85%)
 Frame = +1

Query: 103 AGAPYASRTAEEVFRDFRGRRAGMIKALTQEVDKFYQLCDPEKENLCLYGYPNETWGVTL 282
           AG  Y  RT EEVFRDF+GRRAGMIKALT +V +F++LCDPEKENLCLYG+PNE W V L
Sbjct: 3   AGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNL 62

Query: 283 PAEEVPPEIPE 315
           PAEEVPPE+PE
Sbjct: 63  PAEEVPPELPE 73

>UBP28_HUMAN (Q96RU2) Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 28)
           (Ubiquitin-specific-processing protease 28)
           (Deubiquitinating enzyme 28)
          Length = 1077

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = +1

Query: 106 GAPYASRTAEEVFRDFRGRRAGMIKALTQEVDKFYQLC--------DPEKENLCLYGYPN 261
           G   A   A + F D  G  AG+IKA  +E  + YQL         DP  +++ +Y + N
Sbjct: 777 GVILAIAKARQTF-DRDGSEAGLIKAFHEEYSRLYQLAKETPTSHSDPRLQHVLVYFFQN 835

Query: 262 E 264
           E
Sbjct: 836 E 836

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 158 PRKSRKTSSAVREA*GAPAPAPTSIQG 78
           PR +R+ SS+ R A G+P PAP   QG
Sbjct: 733 PRSARRVSSS-RSASGSPEPAPKKHQG 758

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 167  ARRPRKSRKTSSAVREA*GAPAPAPTSIQ 81
            AR       T +A++EA GAPAPAP + Q
Sbjct: 2305 AREEPLPTTTPAAIKEAAGAPAPAPLAGQ 2333

>PHNF_ECOLI (P16684) Probable transcriptional regulator phnF|
          Length = 241

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 174 DQGPHPRSGQVLPALRPRKGEL 239
           DQG HP S ++L  LRP  G +
Sbjct: 96  DQGSHPTSEKLLSVLRPASGHV 117

>BAG1_HUMAN (Q99933) BAG family molecular chaperone regulator 1 (BCL-2-binding|
           athanogene-1) (BAG-1) (Glucocorticoid
           receptor-associated protein RAP46)
          Length = 274

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 136 EVFRDFRGRRAGMIKALTQEVDKFYQLCDPEKENLC 243
           E F+D R +R G++K    +V  F   CD  ++N+C
Sbjct: 228 ENFKDSRLKRKGLVK----KVQAFLAECDTVEQNIC 259

>HIS8_THIDN (Q30TC9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 364

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 166 AGMIKALTQE--VDKFYQLCDPEKENLCLYGYPNETWGVTLPAEEV 297
           A +I+  +QE  +D+FY+L   EK  +     PN   G  L A+++
Sbjct: 129 ADVIRTSSQEHDLDEFYELYKQEKPEIIFICTPNNPTGDALDAQKI 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,429,260
Number of Sequences: 219361
Number of extensions: 498718
Number of successful extensions: 1738
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)