| Clone Name | baet99g08 |
|---|---|
| Clone Library Name | barley_pub |
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 123 bits (309), Expect = 1e-28 Identities = 59/118 (50%), Positives = 88/118 (74%), Gaps = 2/118 (1%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLAS--RRMKCLQRIAYLNVGIY 174 KR AF+G+APINL+DRLHQVLRWA GSVEIFFSR+ L + ++K L+R+AY+N +Y Sbjct: 768 KRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVY 827 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINL 348 PFTSI L+ YC +PA+ L +G+FI+ ++ + L + L++ A+LE++WSG+++ Sbjct: 828 PFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSI 885
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 123 bits (308), Expect = 1e-28 Identities = 60/119 (50%), Positives = 86/119 (72%), Gaps = 3/119 (2%) Frame = +1 Query: 4 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVL---LASRRMKCLQRIAYLNVGIY 174 R AF+G+APINL+DRLHQVLRWA GSVEIF SR+ L + R+K LQR+AY+N +Y Sbjct: 704 RPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVY 763 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 PFTS+ L+ YC LPA+ L +G+FI+ L L + +++ + +VLE++WSG+++E Sbjct: 764 PFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIE 822
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 119 bits (299), Expect = 1e-27 Identities = 57/120 (47%), Positives = 85/120 (70%), Gaps = 3/120 (2%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVL---LASRRMKCLQRIAYLNVGI 171 KR AF+G+APINL+DRL+QVLRWA GSVEIFFSR++ L ++K L+R AY N I Sbjct: 746 KRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTI 805 Query: 172 YPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 YPFTSI L+ YC LPA+ L + +FI+ + + + + +++ + +LE++WSG+++E Sbjct: 806 YPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIE 865
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 114 bits (286), Expect = 5e-26 Identities = 57/119 (47%), Positives = 84/119 (70%), Gaps = 2/119 (1%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLA--SRRMKCLQRIAYLNVGIY 174 K AF+G+APINL+DRL+QVLRWA GSVEI FSR+ + + R+K L+R AY+N IY Sbjct: 785 KLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIY 844 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 P TSI L++YC LPA+ LF+ QFI+ ++ + L + L++ +LE++WSG+ ++ Sbjct: 845 PITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGID 903
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 112 bits (281), Expect = 2e-25 Identities = 53/118 (44%), Positives = 83/118 (70%), Gaps = 2/118 (1%) Frame = +1 Query: 4 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASR--RMKCLQRIAYLNVGIYP 177 R AF+G+APINL+DRL+QVLRWA GS+EI SR+ + R++ L+RIAY+N +YP Sbjct: 801 RPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYP 860 Query: 178 FTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 TSI LI YC LPA L + +FI+ E+ + +++ +++ + +LE++WSG+++E Sbjct: 861 ITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIE 918
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 112 bits (280), Expect = 2e-25 Identities = 55/119 (46%), Positives = 84/119 (70%), Gaps = 2/119 (1%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRR--MKCLQRIAYLNVGIY 174 KR AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R +Y+N +Y Sbjct: 804 KRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVY 863 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 P+TS+ LIVYC LPA+ L +G+FIV E+ +++ +++ + +LE++W G+ ++ Sbjct: 864 PWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGID 922
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 110 bits (274), Expect = 1e-24 Identities = 55/119 (46%), Positives = 83/119 (69%), Gaps = 2/119 (1%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRR--MKCLQRIAYLNVGIY 174 KR AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R +Y+N +Y Sbjct: 808 KRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVY 867 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 P+TS+ L+VYC LPA+ L +G+FIV E+ L++ +++ + +LE++W I ++ Sbjct: 868 PWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGID 926
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 108 bits (270), Expect = 3e-24 Identities = 55/118 (46%), Positives = 79/118 (66%), Gaps = 2/118 (1%) Frame = +1 Query: 4 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLA--SRRMKCLQRIAYLNVGIYP 177 R AF+G+APINL+DRL+QVLRWA GS+EI SR+ + + R+K L+RIAY+N +YP Sbjct: 788 RPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYP 847 Query: 178 FTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 TSI L+ YC LPA L + FI+ E+ +++ ++ A+LE+KWS + LE Sbjct: 848 ITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALE 905
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 107 bits (266), Expect = 9e-24 Identities = 53/119 (44%), Positives = 81/119 (68%), Gaps = 2/119 (1%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRR--MKCLQRIAYLNVGIY 174 K AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R++Y+N +Y Sbjct: 805 KLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVY 864 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 P+TS+ LIVYC LPA+ L +G+FIV E+ + + ++ + +LE++W + ++ Sbjct: 865 PWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGID 923
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 106 bits (264), Expect = 2e-23 Identities = 53/119 (44%), Positives = 81/119 (68%), Gaps = 2/119 (1%) Frame = +1 Query: 1 KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRR--MKCLQRIAYLNVGIY 174 K AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R++Y+N +Y Sbjct: 790 KIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVY 849 Query: 175 PFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 351 P+TSI L+VYC LPA+ L +G+FIV E+ + + ++ + +LE++W + ++ Sbjct: 850 PWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGID 908
>BCSA_XANAC (P58932) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 729 Score = 45.4 bits (106), Expect = 3e-05 Identities = 28/89 (31%), Positives = 45/89 (50%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A +L+ + Q +RWA G +I +R + L R +K QR+ YLN ++ F + I Sbjct: 361 GLATESLSGHVAQRIRWARGMAQI--ARIDNPLLGRGLKLSQRLCYLNAMLHFFYGVPRI 418 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLL 285 +Y P LF G +++ + L Y L Sbjct: 419 IYLTAPLAYLFFGAHVIQASALMILAYAL 447
>BCSA2_ACEXY (O82859) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 756 Score = 45.1 bits (105), Expect = 4e-05 Identities = 29/89 (32%), Positives = 44/89 (49%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A LT + Q +RWA G ++IF N +L R +K QR+ YL+ F +I + Sbjct: 359 GLATERLTTHIGQRMRWARGMIQIFRVDNPML--GRGLKLGQRLCYLSAMTSFFFAIPRV 416 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLL 285 ++ P LF+GQ I+ + Y L Sbjct: 417 IFLASPLAFLFAGQNIIAAAPLAVAAYAL 445
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/89 (31%), Positives = 43/89 (48%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A LT + Q +RWA G ++IF N +L +K QR+ YL+ F +I + Sbjct: 357 GLATERLTTHIGQRMRWARGMIQIFRVDNPML--GGGLKLGQRLCYLSAMTSFFFAIPRV 414 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLL 285 ++ P LF GQ I+ + L Y + Sbjct: 415 IFLASPLAFLFFGQNIIAASPLAVLAYAI 443
>BCSA_PSEFL (P58931) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 739 Score = 37.4 bits (85), Expect = 0.009 Identities = 26/89 (29%), Positives = 43/89 (48%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A +L+ ++Q +RWA G +IF + N +L + +K QRI Y N + F + + Sbjct: 367 GLATESLSRHINQRIRWARGMAQIFRTDNPLL--GKGLKWGQRICYANAMQHFFYGLPRL 424 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLL 285 V+ P L G I + + Y+L Sbjct: 425 VFLTAPLAYLIFGAEIFHASALMIVAYVL 453
>BCSA_SALTY (Q93IN2) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 874 Score = 36.6 bits (83), Expect = 0.016 Identities = 23/77 (29%), Positives = 39/77 (50%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A +L+ + Q +RWA G V+IF R + L + +K QR+ YLN + + I + Sbjct: 481 GLATESLSAHIGQRIRWARGMVQIF--RLDNPLFGKGLKLAQRLCYLNAMFHFLSGIPRL 538 Query: 199 VYCFLPALSLFSGQFIV 249 ++ P L +I+ Sbjct: 539 IFLTAPLAFLLLHAYII 555
>BCSA_SALTI (Q8Z291) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 874 Score = 36.6 bits (83), Expect = 0.016 Identities = 23/77 (29%), Positives = 39/77 (50%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A +L+ + Q +RWA G V+IF R + L + +K QR+ YLN + + I + Sbjct: 481 GLATESLSAHIGQRIRWARGMVQIF--RLDNPLFGKGLKLAQRLCYLNAMFHFLSGIPRL 538 Query: 199 VYCFLPALSLFSGQFIV 249 ++ P L +I+ Sbjct: 539 IFLTAPLAFLLLHAYII 555
>BCSA_ECOLI (P37653) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 872 Score = 35.8 bits (81), Expect = 0.027 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A +L+ + Q +RWA G V+IF R + L + +K QR+ Y+N + + I + Sbjct: 481 GLATESLSAHIGQRIRWARGMVQIF--RLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRL 538 Query: 199 VYCFLPALSLFSGQFIV 249 ++ P L +I+ Sbjct: 539 IFLTAPLAFLLLHAYII 555
>BCSA_ECO57 (Q8X5L7) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 872 Score = 35.8 bits (81), Expect = 0.027 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A +L+ + Q +RWA G V+IF R + L + +K QR+ Y+N + + I + Sbjct: 481 GLATESLSAHIGQRIRWARGMVQIF--RLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRL 538 Query: 199 VYCFLPALSLFSGQFIV 249 ++ P L +I+ Sbjct: 539 IFLTAPLAFLLLHAYII 555
>BCSA5_ACEXY (Q9WX75) Putative cellulose synthase 3 [Includes: Cellulose| synthase catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 3 regulatory subunit)] Length = 1518 Score = 35.4 bits (80), Expect = 0.035 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A L + Q +RWA G ++I N +L A R + QR+ YL+ + +I + Sbjct: 354 GLATERLILHIGQRVRWARGMIQIMRLDNPMLGAGLRWE--QRLCYLSAMSHFLFAIPRL 411 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLLV-ITLTLCMLAVLEIKW 333 + P LF GQ I+ + Y L I ++ L+ +E +W Sbjct: 412 TFLVSPLAFLFLGQNIIAASPLAISVYALPHIFHSVITLSRIEGRW 457
>BCSA4_ACEXY (Q9RBJ2) Putative cellulose synthase 2 [Includes: Cellulose| synthase catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 2 regulatory subunit)] Length = 1518 Score = 35.4 bits (80), Expect = 0.035 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A L + Q +RWA G ++I N +L A R + QR+ YL+ + +I + Sbjct: 354 GLATERLILHIGQRVRWARGMIQIMRLDNPMLGAGLRWE--QRLCYLSAMSHFLFAIPRL 411 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLLV-ITLTLCMLAVLEIKW 333 + P LF GQ I+ + Y L I ++ L+ +E +W Sbjct: 412 TFLVSPLAFLFLGQNIIAASPLAISVYALPHIFHSVITLSRIEGRW 457
>BCSA3_ACEXY (Q9WX61) Cellulose synthase 1 catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 745 Score = 35.0 bits (79), Expect = 0.045 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A L + Q +RWA G ++IF N +L +K QR+ YL+ F +I + Sbjct: 357 GLATERLITHIGQRMRWARGMIQIFRVDNPML--GSGLKLGQRLCYLSAMTSFFFAIPRV 414 Query: 199 VYCFLPALSLFSGQFIV 249 ++ P LF Q I+ Sbjct: 415 IFLASPLAFLFFSQNII 431
>ACSA1_ACEXY (P21877) Cellulose synthase 1 [Includes: Cellulose synthase| catalytic domain [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 1 regulatory domain)] Length = 1550 Score = 34.3 bits (77), Expect = 0.078 Identities = 25/89 (28%), Positives = 40/89 (44%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G A L + Q +RWA G ++IF N L R + QR+ YL+ ++ + Sbjct: 357 GLATERLILHIGQRVRWARGMLQIFRIDNP--LFGRGLSWGQRLCYLSAMTSFLFAVPRV 414 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTYLL 285 ++ P LF GQ I+ + L Y + Sbjct: 415 IFLSSPLAFLFFGQNIIAASPLALLAYAI 443
>ACSA2_ACEXY (Q59167) Cellulose synthase 2 [Includes: Cellulose synthase| catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 2 regulatory domain)] Length = 1596 Score = 32.7 bits (73), Expect = 0.23 Identities = 25/87 (28%), Positives = 40/87 (45%) Frame = +1 Query: 19 GTAPINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSIFLI 198 G + L + Q +RWA G ++I N +L + R + QR+ YL+ + +I + Sbjct: 355 GLSTERLMLHIGQRVRWARGMLQIMRLDNPLLGSGLRWQ--QRLCYLSAMSHFLFAIPRL 412 Query: 199 VYCFLPALSLFSGQFIVKELDVTFLTY 279 V+ P LF GQ I+ L Y Sbjct: 413 VFLASPLAFLFLGQNIIAASPFAILVY 439
>ATKB_STRCO (Q9X8Z9) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 707 Score = 31.2 bits (69), Expect = 0.66 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +1 Query: 4 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN-NVLLASRRMKCLQRIAYLNVGIYPF 180 R A G + L+DR+ V+R T E F R N++ + R K IA LN+ + Sbjct: 192 RSAVTGGTKV-LSDRI--VVRITTKPGETFIDRMINLVEGAARQKTPNEIA-LNILLASL 247 Query: 181 TSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCML 312 T +FL+ LP + ++G T L ++++ L +C++ Sbjct: 248 TVVFLLACATLPPFADYAG---------THLDMIVLVALLVCLI 282
>NR1D1_HUMAN (P20393) Orphan nuclear receptor NR1D1 (V-erbA-related protein| EAR-1) (Rev-erbA-alpha) Length = 614 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +3 Query: 18 RHCTYQPD*PSPPGAPVGYWLSGDLLLPQQCA-AREPKDEVSSEDCVPE 161 +H T P PSPP APV L G PQQ R P E + ED + + Sbjct: 243 QHPTPGPMGPSPPPAPVPSPLVGFSQFPQQLTPPRSPSPEPTVEDVISQ 291
>ATS18_MOUSE (Q4VC17) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 18) (ADAM-TS 18) (ADAM-TS18) Length = 1219 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 9/70 (12%) Frame = +3 Query: 162 RGYXXXXXXXXXXXXXXAGAVALLRTVHRQGAGRDLPHL---------PAGHHPDAVHAG 314 +G+ AG L+RT + LP L PAGHHP ++ Sbjct: 146 QGFIRNDSSSSVAVSTCAGLSGLIRTRDNEFLISPLPQLLAQELNYSSPAGHHPHVLYKR 205 Query: 315 GAGDQVVWHQ 344 A +V W+Q Sbjct: 206 TAEKRVRWYQ 215
>HLYB_PROVU (P11599) Alpha-hemolysin translocation ATP-binding protein hlyB| Length = 707 Score = 28.9 bits (63), Expect = 3.3 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 12/93 (12%) Frame = +1 Query: 100 RNNVLLASRRMKCLQRIAYLNV-----GIYPFTSIF---LIVYCFLPALSLFSGQFIVKE 255 + N++L + R + ++A + + + IF LIV FL +L + F Sbjct: 119 QGNIILITSRSSVIGKLAKFDFTWFIPAVIKYRKIFIETLIVSVFLQLFALITPLFFQVV 178 Query: 256 LDVTFL----TYLLVITLTLCMLAVLEIKWSGI 342 +D + + L +IT+ L ++A+ EI SG+ Sbjct: 179 MDKVLVHRGFSTLNIITIALAVVAIFEITLSGL 211
>MPRF_STAHJ (Q4L667) Probable lysylphosphatidylglycerol synthetase (LPG| synthetase) (Multiple peptide resistance factor) Length = 840 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = +1 Query: 109 VLLASRRMKCLQRIAYLNVGIYPFTSIFLIVYC--FLPALSLFSGQFIVKELDVTFLTYL 282 ++LA RR K ++R L I+ L++Y F+ + +L++ E+D + L Y Sbjct: 432 LILAYRRSKVMKRPFRLKRLIFTIILSMLVLYVNHFIISETLYALDIYHIEMDTSLLKYY 491 Query: 283 LVITLTLCMLAVLEIKW 333 +T+ + ++ V + W Sbjct: 492 FWLTILVVVILVGIVAW 508
>LAPM5_PONPY (Q5REZ0) Lysosomal-associated multitransmembrane protein| Length = 262 Score = 28.5 bits (62), Expect = 4.3 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = +1 Query: 88 IFFSRNNVLLASRRMKC-LQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDV 264 + F ++V +A + C L ++ YL + +S LI F+ +LSL G +VK + Sbjct: 34 LLFIEHSVEVAHGKASCKLSQMGYLRIADL-ISSFLLIAMLFIISLSLLIG--VVKNREK 90 Query: 265 TFLTYLL--VITLTLCMLAVL 321 L +L V+ LC+L +L Sbjct: 91 YLLPFLSLQVMDYLLCLLTLL 111
>NUD1_YEAST (P32336) Protein NUD1| Length = 851 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 67 WATGSVEIFFSRNNVLLASRRMKCLQRIAYLNVGIYPFTSI 189 W T VE+ NN ++ R + CL R+ LN+ P SI Sbjct: 619 WLT--VEVLDLSNNNIIGVRNINCLPRLKVLNLNGNPLVSI 657
>CHAA_ECOLI (P31801) Calcium/proton antiporter| Length = 366 Score = 28.5 bits (62), Expect = 4.3 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 6/106 (5%) Frame = +1 Query: 25 APINLTDRLHQVLRWATGSVEIFFSRNNVLLASRRMKC----LQRIAYLNVGIYPFTSIF 192 AP + D L+ ++ TG + F ++LL R+ L I + ++P I Sbjct: 99 APTLMRDTLYSIIMIVTGGLVGF----SLLLGGRKFATQYMNLFGIKQYLIALFPLAIIV 154 Query: 193 LIVYCFLPALSLFSGQFIVKEL--DVTFLTYLLVITLTLCMLAVLE 324 L+ LPA + +GQ ++ L + +LL+ T T L V E Sbjct: 155 LVFPMALPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYE 200
>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) Length = 518 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 51 PPGAPVGYWLSGDLLLPQQCAAREPKDEVSSEDCVPE 161 P P L G L Q C + EPKD S ++C+P+ Sbjct: 246 PQAGPETPGLEGLKELMQLCWSSEPKDRPSFQECLPK 282
>INVO_PONPY (P14708) Involucrin| Length = 835 Score = 28.1 bits (61), Expect = 5.6 Identities = 27/114 (23%), Positives = 41/114 (35%) Frame = -3 Query: 351 LQVDARPLDLQHRQHAQRQGDDQQVGEEGHVQLLDDELSGEERQRRQXXXXXXXXXXXXX 172 L + L+L +Q Q + +QQ G+ H++ + +L E Q Q Sbjct: 576 LDQQEKQLELPEQQVGQLKHLEQQEGQLEHLEGQEGQLEHLEHQEGQLGLPEQQVWQLKQ 635 Query: 171 DTHVQVRNPLKTLHPSAREQHIVAGEEDLH*ASSPPEHLVETVSQVDRCSAAEG 10 Q P + +H+V E L EHL E V Q+ EG Sbjct: 636 LEK-QEGQPKNLEEEEGQLKHLVQQEGQLEQQEGQVEHLEEQVGQLKHLEEQEG 688
>MOK14_SCHPO (Q9Y704) Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)| Length = 1369 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = +1 Query: 118 ASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLP----ALSLFSGQFIVKELDVTFLTYLL 285 AS R+ QRI YL V +P +IFL + L LSL SG ++ + +T + Sbjct: 925 ASTRLNIYQRILYLKVFTWPLYTIFLSLGQILSISSFQLSLLSGFEDNNQISLYVITGVF 984 Query: 286 VIT 294 +++ Sbjct: 985 ILS 987
>LAPM5_HUMAN (Q13571) Lysosomal-associated multitransmembrane protein (Retinoic| acid-inducible E3 protein) (HA1520) Length = 262 Score = 28.1 bits (61), Expect = 5.6 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = +1 Query: 88 IFFSRNNVLLASRRMKC-LQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDV 264 + F ++V +A + C L ++ YL + +S LI F+ +LSL G +VK + Sbjct: 34 LLFIEHSVEVAHGKASCKLSQMGYLRIADL-ISSFLLITMLFIISLSLLIG--VVKNREK 90 Query: 265 TFLTYLL--VITLTLCMLAVL 321 L +L ++ LC+L +L Sbjct: 91 YLLPFLSLQIMDYLLCLLTLL 111
>RIPK3_RAT (Q9Z2P5) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) (Homocysteine respondent protein HCYP2) Length = 478 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 51 PPGAPVGYWLSGDLLLPQQCAAREPKDEVSSEDC 152 PP +P L G L C + EPKD S +DC Sbjct: 248 PPDSPETPGLEGLKELMTHCWSSEPKDRPSFQDC 281
>MPRF_STAES (Q8CPC0) Probable lysylphosphatidylglycerol synthetase (LPG| synthetase) (Multiple peptide resistance factor) Length = 840 Score = 27.3 bits (59), Expect = 9.5 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = +1 Query: 109 VLLASRRMKCLQR-IAYLNVGIYPFTSIFLI-VYCFLPALSLFSGQFIVKELDVTFLTYL 282 ++LA +R + L+R + + + + SIF++ + L + +L++ E+D + L Y Sbjct: 432 LILAYQRAQVLKRPLRFKKLAVMLLLSIFILYLNHILISGTLYALDVYHIEIDTSLLRYY 491 Query: 283 LVITLTLCMLAVLEIKW 333 +T+ + ML V I W Sbjct: 492 FWMTIVIIMLLVGVIAW 508 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,590,756 Number of Sequences: 219361 Number of extensions: 830183 Number of successful extensions: 3071 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3047 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)