ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464727.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
2dbj|AK067205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3ref|XM_464728.1| Oryza sativa (japonica cultivar-group), mRNA 204 2e-49
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
5dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
6dbj|AK068836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
7emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4,... 105 1e-19
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
11dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
12dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
14dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
16dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
17gb|BT024134.1| Zea mays clone EL01N0446D12 mRNA sequence 54 4e-04
18gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 46 0.10
19gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
20ref|XM_475780.1| Oryza sativa (japonica cultivar-group), predic... 44 0.41
21gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
22gb|AC124250.11| Mus musculus chromosome 12, clone RP24-286P13, c... 44 0.41
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
24gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 1.6
25gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.6
26gb|AC152826.2| Mus musculus BAC clone RP23-111C21 from chromosom... 42 1.6
27gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom... 42 1.6
28ref|XM_860004.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.6
29ref|XM_859988.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.6
30ref|XM_859968.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.6
31ref|XM_859951.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.6
32ref|XM_531822.2| PREDICTED: Canis familiaris similar to chromoso... 42 1.6
33gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, comple... 42 1.6
34gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence 42 1.6
35gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, co... 42 1.6
36dbj|AK145959.1| Mus musculus 11 days pregnant adult female place... 42 1.6
37dbj|AK160599.1| Mus musculus 10 days embryo whole body cDNA, RIK... 42 1.6
38dbj|AK170606.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.6
39dbj|AK171458.1| Mus musculus B6-derived CD11 +ve dendritic cells... 42 1.6
40dbj|AK052768.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 1.6
41gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome... 42 1.6
42dbj|AK032683.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 42 1.6
43ref|NM_001012638.1| Mus musculus adrenocortical dysplasia (Acd),... 42 1.6
44dbj|AK030405.1| Mus musculus adult male pituitary gland cDNA, RI... 42 1.6
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
46dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
47dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
48dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
49gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, comple... 42 1.6
50gb|AY902197.1| Mus musculus adrenocortical dysplasia (Acd) gene,... 42 1.6
51gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.6
52gb|AF064553.1|AF064553 Mus musculus NSD1 protein mRNA, complete cds 42 1.6
53gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome... 42 1.6
54gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.4
55gb|AC124985.16| Mus musculus chromosome 8, clone RP24-230O22, co... 40 6.4
56ref|XM_956989.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
57ref|XM_328654.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
58gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.4
59gb|AC121592.3| Mus musculus BAC clone RP23-292K4 from 8, complet... 40 6.4
60emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on ch... 40 6.4
61emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 6.4
62emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.4
63gb|AC182739.1| Gasterosteus aculeatus clone VMRC26-26K03, comple... 40 6.4
64gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.4
65dbj|AK044295.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 6.4
66emb|BX818176.1|CNS0AEES Arabidopsis thaliana Full-length cDNA Co... 40 6.4
67gb|AC154818.2| Mus musculus BAC clone RP23-73C20 from chromosome... 40 6.4
68dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 6.4
69gb|AC141634.4| Mus musculus BAC clone RP24-69A18 from chromosome... 40 6.4
70gb|AE005085.1| Halobacterium sp. NRC-1 section 116 of 170 of the... 40 6.4
71emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.4
72dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 6.4
73gb|AC125520.3| Mus musculus BAC clone RP24-281J17 from 8, comple... 40 6.4
74gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, comple... 40 6.4
75gb|AC160120.2| Mus musculus BAC clone RP23-407B7 from chromosome... 40 6.4
76emb|AL603868.15| Mouse DNA sequence from clone RP23-101J23 on ch... 40 6.4 
>ref|XM_464727.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1846

 Score =  317 bits (160), Expect = 2e-83
 Identities = 199/212 (93%)
 Strand = Plus / Plus

                                                                       
Query: 192 aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 344 aggaaggtggcctccctcttctcccagaggggcaagaaaggccccaaccaggactctgtc 403

                                                                       
Query: 252 atcctctgccagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccac 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 404 atcctctgccagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccat 463

                                                                       
Query: 312 ggcaggtgcggccacttggtcagcaagctggtgagggactacctccccttcatggtcctg 371
           ||| ||||||| || ||  |||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 464 ggccggtgcgggcaattcatcagcaagctggtgcgggactacctcccgttcatgatcctg 523

                                           
Query: 372 agccaccggaacgcgctgctccttgccgacgc 403
           ||||||||||||||||||||||| ||||||||
Sbjct: 524 agccaccggaacgcgctgctcctggccgacgc 555
to top
>dbj|AK067205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D23, full
           insert sequence
          Length = 1846

 Score =  317 bits (160), Expect = 2e-83
 Identities = 199/212 (93%)
 Strand = Plus / Plus

                                                                       
Query: 192 aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 344 aggaaggtggcctccctcttctcccagaggggcaagaaaggccccaaccaggactctgtc 403

                                                                       
Query: 252 atcctctgccagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccac 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 404 atcctctgccagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccat 463

                                                                       
Query: 312 ggcaggtgcggccacttggtcagcaagctggtgagggactacctccccttcatggtcctg 371
           ||| ||||||| || ||  |||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 464 ggccggtgcgggcaattcatcagcaagctggtgcgggactacctcccgttcatgatcctg 523

                                           
Query: 372 agccaccggaacgcgctgctccttgccgacgc 403
           ||||||||||||||||||||||| ||||||||
Sbjct: 524 agccaccggaacgcgctgctcctggccgacgc 555
to top
>ref|XM_464728.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2257

 Score =  204 bits (103), Expect = 2e-49
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                       
Query: 261 cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccacggcaggtgc 320
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 812 cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccatggccggtgc 871

                                                                       
Query: 321 ggccacttggtcagcaagctggtgagggactacctccccttcatggtcctgagccaccgg 380
           || || ||  |||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 872 gggcaattcatcagcaagctggtgcgggactacctcccgttcatgatcctgagccaccgg 931

                                  
Query: 381 aacgcgctgctccttgccgacgc 403
           |||||||||||||| ||||||||
Sbjct: 932 aacgcgctgctcctggccgacgc 954
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  204 bits (103), Expect = 2e-49
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                           
Query: 261     cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccacggcaggtgc 320
               |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 6957458 cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccatggccggtgc 6957517

                                                                           
Query: 321     ggccacttggtcagcaagctggtgagggactacctccccttcatggtcctgagccaccgg 380
               || || ||  |||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 6957518 gggcaattcatcagcaagctggtgcgggactacctcccgttcatgatcctgagccaccgg 6957577

                                      
Query: 381     aacgcgctgctccttgccgacgc 403
               |||||||||||||| ||||||||
Sbjct: 6957578 aacgcgctgctcctggccgacgc 6957600



 Score =  121 bits (61), Expect = 2e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                           
Query: 192     aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
               |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 6956041 aggaaggtggcctccctcttctcccagaggggcaagaaaggccccaaccaggactctgtc 6956100

                            
Query: 252     atcctctgccagg 264
               |||||||||||||
Sbjct: 6956101 atcctctgccagg 6956113



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 142      gcatcgtgtatgtgatggacgagga 166
                |||||||| ||||||||||||||||
Sbjct: 21973547 gcatcgtgcatgtgatggacgagga 21973571
to top
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470A03
          Length = 133167

 Score =  204 bits (103), Expect = 2e-49
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                         
Query: 261   cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccacggcaggtgc 320
             |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 51080 cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccatggccggtgc 51139

                                                                         
Query: 321   ggccacttggtcagcaagctggtgagggactacctccccttcatggtcctgagccaccgg 380
             || || ||  |||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 51140 gggcaattcatcagcaagctggtgcgggactacctcccgttcatgatcctgagccaccgg 51199

                                    
Query: 381   aacgcgctgctccttgccgacgc 403
             |||||||||||||| ||||||||
Sbjct: 51200 aacgcgctgctcctggccgacgc 51222



 Score =  121 bits (61), Expect = 2e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                         
Query: 192   aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
             |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 49663 aggaaggtggcctccctcttctcccagaggggcaagaaaggccccaaccaggactctgtc 49722

                          
Query: 252   atcctctgccagg 264
             |||||||||||||
Sbjct: 49723 atcctctgccagg 49735
to top
>dbj|AK068836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159P20, full
           insert sequence
          Length = 2255

 Score =  204 bits (103), Expect = 2e-49
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                       
Query: 261 cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccacggcaggtgc 320
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 811 cagggattcggcatggaggacggcgtgttctgcggcgtgttcgacggccatggccggtgc 870

                                                                       
Query: 321 ggccacttggtcagcaagctggtgagggactacctccccttcatggtcctgagccaccgg 380
           || || ||  |||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 871 gggcaattcatcagcaagctggtgcgggactacctcccgttcatgatcctgagccaccgg 930

                                  
Query: 381 aacgcgctgctccttgccgacgc 403
           |||||||||||||| ||||||||
Sbjct: 931 aacgcgctgctcctggccgacgc 953
to top
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08,
             complete sequence
          Length = 140449

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                         
Query: 192   aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
             |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||
Sbjct: 67092 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggactctgtc 67151

                          
Query: 252   atcctctgccagg 264
             |||||||||||||
Sbjct: 67152 atcctctgccagg 67164
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                            
Query: 192      aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
                |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||
Sbjct: 27124449 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggactctgtc 27124508

                             
Query: 252      atcctctgccagg 264
                |||||||||||||
Sbjct: 27124509 atcctctgccagg 27124521
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                            
Query: 192      aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
                |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||
Sbjct: 15603639 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggactctgtc 15603580

                             
Query: 252      atcctctgccagg 264
                |||||||||||||
Sbjct: 15603579 atcctctgccagg 15603567
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                            
Query: 192      aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
                |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||
Sbjct: 22571534 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggactctgtc 22571593

                             
Query: 252      atcctctgccagg 264
                |||||||||||||
Sbjct: 22571594 atcctctgccagg 22571606
to top
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                         
Query: 192   aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
             |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||
Sbjct: 51916 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggactctgtc 51975

                          
Query: 252   atcctctgccagg 264
             |||||||||||||
Sbjct: 51976 atcctctgccagg 51988
to top
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0410E11
          Length = 150200

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                         
Query: 192   aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
             |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||
Sbjct: 37794 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggactctgtc 37735

                          
Query: 252   atcctctgccagg 264
             |||||||||||||
Sbjct: 37734 atcctctgccagg 37722
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 192      aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
                |||||||||||||| ||||||||||||| |||||| |||||||||||||||| | | |||
Sbjct: 33985084 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggcctctgtc 33985025

                             
Query: 252      atcctctgccagg 264
                |||||||||||||
Sbjct: 33985024 atcctctgccagg 33985012
to top
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0003D09
          Length = 161970

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                          
Query: 192    aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaaccaggacgcagtc 251
              |||||||||||||| ||||||||||||| |||||| |||||||||||||||| | | |||
Sbjct: 116527 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaaccaggcctctgtc 116468

                           
Query: 252    atcctctgccagg 264
              |||||||||||||
Sbjct: 116467 atcctctgccagg 116455
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 192      aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaacc 240
                |||||||||||||| ||||||||||||| |||||| |||||||||||||
Sbjct: 14226709 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaacc 14226757
to top
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0022O02
          Length = 176625

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 192   aggaaggtggcctccctcttctcccagaagggcaagaaaggccccaacc 240
             |||||||||||||| ||||||||||||| |||||| |||||||||||||
Sbjct: 70173 aggaaggtggcctctctcttctcccagaggggcaaaaaaggccccaacc 70221
to top
>gb|BT024134.1| Zea mays clone EL01N0446D12 mRNA sequence
          Length = 1184

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 354 ctccccttcatggtcctgagccaccggaacgcgct 388
           ||||| |||||| ||||||||||||||||||||||
Sbjct: 19  ctcccgttcatgatcctgagccaccggaacgcgct 53
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 178     gcgcgtcgtcgccgaggaaggtg 200
               |||||||||||||||||||||||
Sbjct: 2255277 gcgcgtcgtcgccgaggaaggtg 2255255
to top
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0052K01, complete sequence
          Length = 144395

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 293   cggcgtgttcgacggccacggc 314
             ||||||||||||||||||||||
Sbjct: 14164 cggcgtgttcgacggccacggc 14143
to top
>ref|XM_475780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 293 cggcgtgttcgacggccacggc 314
           ||||||||||||||||||||||
Sbjct: 342 cggcgtgttcgacggccacggc 363
to top
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
              complete sequence
          Length = 147704

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 293    cggcgtgttcgacggccacggc 314
              ||||||||||||||||||||||
Sbjct: 145380 cggcgtgttcgacggccacggc 145359
to top
>gb|AC124250.11| Mus musculus chromosome 12, clone RP24-286P13, complete sequence
          Length = 213630

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 150   tatgtgatggacgaggaaggag 171
             ||||||||||||||||||||||
Sbjct: 98028 tatgtgatggacgaggaaggag 98049
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 293      cggcgtgttcgacggccacggc 314
                ||||||||||||||||||||||
Sbjct: 26500689 cggcgtgttcgacggccacggc 26500668
to top
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    gcggcgtgttcgacggccacg 312
              |||||||||||||||||||||
Sbjct: 646251 gcggcgtgttcgacggccacg 646231
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    gcgctgctccttgccgacgcg 404
              |||||||||||||||||||||
Sbjct: 388130 gcgctgctccttgccgacgcg 388150
to top
>gb|AC152826.2| Mus musculus BAC clone RP23-111C21 from chromosome 8, complete sequence
          Length = 196497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 362    catggtcctgagccaccggaacgcg 386
              ||||||||||||||||| |||||||
Sbjct: 133645 catggtcctgagccacctgaacgcg 133621
to top
>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 18     ctcttgctcttgctcccccctcccc 42
              ||||||||||||||| |||||||||
Sbjct: 182018 ctcttgctcttgctctcccctcccc 182042
to top
>ref|XM_860004.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 5 (LOC474593), mRNA
          Length = 2450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 gaggaaggaggaggcggcgcg 182
           |||||||||||||||||||||
Sbjct: 160 gaggaaggaggaggcggcgcg 180
to top
>ref|XM_859988.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 4 (LOC474593), mRNA
          Length = 2438

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 gaggaaggaggaggcggcgcg 182
           |||||||||||||||||||||
Sbjct: 160 gaggaaggaggaggcggcgcg 180
to top
>ref|XM_859968.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 3 (LOC474593), mRNA
          Length = 2271

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 gaggaaggaggaggcggcgcg 182
           |||||||||||||||||||||
Sbjct: 160 gaggaaggaggaggcggcgcg 180
to top
>ref|XM_859951.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 2 (LOC474593), mRNA
          Length = 2354

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 gaggaaggaggaggcggcgcg 182
           |||||||||||||||||||||
Sbjct: 160 gaggaaggaggaggcggcgcg 180
to top
>ref|XM_531822.2| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 1 (LOC474593), mRNA
          Length = 2446

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 gaggaaggaggaggcggcgcg 182
           |||||||||||||||||||||
Sbjct: 160 gaggaaggaggaggcggcgcg 180
to top
>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence
          Length = 196490

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 18     ctcttgctcttgctcccccctcccc 42
              ||||||||||||||| |||||||||
Sbjct: 193656 ctcttgctcttgctctcccctcccc 193632
to top
>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
          Length = 165072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    tgctcttgctcccccctcccc 42
             |||||||||||||||||||||
Sbjct: 22301 tgctcttgctcccccctcccc 22281
to top
>gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, complete sequence
          Length = 181460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 21    ttgctcttgctcccccctccccgcagaag 49
             ||||||||||||| |||||||| ||||||
Sbjct: 43096 ttgctcttgctcctccctcccctcagaag 43068
to top
>dbj|AK145959.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530018A05
           product:nuclear receptor-binding SET-domain protein 1,
           full insert sequence
          Length = 1523

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 390 catggtcctgagccacctgaacgcg 366
to top
>dbj|AK160599.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610001O07 product:hypothetical
           protein, full insert sequence
          Length = 1496

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 365 catggtcctgagccacctgaacgcg 341
to top
>dbj|AK170606.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630110D09
           product:nuclear receptor-binding SET-domain protein 1,
           full insert sequence
          Length = 1408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 274 catggtcctgagccacctgaacgcg 250
to top
>dbj|AK171458.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730216L20
           product:hypothetical protein, full insert sequence
          Length = 1416

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 396 catggtcctgagccacctgaacgcg 372
to top
>dbj|AK052768.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630046L01 product:nuclear
           receptor-binding SET-domain protein 1, full insert
           sequence
          Length = 2724

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 396 catggtcctgagccacctgaacgcg 372
to top
>gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome 17, complete sequence
          Length = 223528

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ctccctcttctcccagaaggg 223
             |||||||||||||||||||||
Sbjct: 83552 ctccctcttctcccagaaggg 83572
to top
>dbj|AK032683.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:6530419C17 product:hypothetical
           protein, full insert sequence
          Length = 1403

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 385 catggtcctgagccacctgaacgcg 361
to top
>ref|NM_001012638.1| Mus musculus adrenocortical dysplasia (Acd), mRNA
          Length = 1425

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 405 catggtcctgagccacctgaacgcg 381
to top
>dbj|AK030405.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330407J07 product:nuclear
           receptor-binding SET-domain protein 1, full insert
           sequence
          Length = 3132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 370 catggtcctgagccacctgaacgcg 346
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 160     acgaggaaggaggaggcggcg 180
               |||||||||||||||||||||
Sbjct: 2342928 acgaggaaggaggaggcggcg 2342948
to top
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0046L23
          Length = 100041

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 142   gcatcgtgtatgtgatggacgagga 166
             |||||||| ||||||||||||||||
Sbjct: 22169 gcatcgtgcatgtgatggacgagga 22193
to top
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0095O23
          Length = 159792

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   acgaggaaggaggaggcggcg 180
             |||||||||||||||||||||
Sbjct: 21338 acgaggaaggaggaggcggcg 21358
to top
>dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0433B06
          Length = 126258

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   acgaggaaggaggaggcggcg 180
             |||||||||||||||||||||
Sbjct: 81967 acgaggaaggaggaggcggcg 81987
to top
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence
          Length = 176649

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    ctcttgctcttgctcccccctcccc 42
             ||||||||||||||| |||||||||
Sbjct: 93137 ctcttgctcttgctctcccctcccc 93113
to top
>gb|AY902197.1| Mus musculus adrenocortical dysplasia (Acd) gene, complete cds
          Length = 2937

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 647 catggtcctgagccacctgaacgcg 623
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 111     ctcgggcagcaggggcaggatgcgg 135
               |||||||||||| ||||||||||||
Sbjct: 2849736 ctcgggcagcagcggcaggatgcgg 2849760
to top
>gb|AF064553.1|AF064553 Mus musculus NSD1 protein mRNA, complete cds
          Length = 10019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 362 catggtcctgagccaccggaacgcg 386
           ||||||||||||||||| |||||||
Sbjct: 60  catggtcctgagccacctgaacgcg 36
to top
>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence
          Length = 212724

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    ctcttgctcttgctcccccctcccc 42
             ||||||||| |||||||||||||||
Sbjct: 44644 ctcttgctcctgctcccccctcccc 44620
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     tcgtcgccgaggaaggtggc 202
               ||||||||||||||||||||
Sbjct: 2510351 tcgtcgccgaggaaggtggc 2510332
to top
>gb|AC124985.16| Mus musculus chromosome 8, clone RP24-230O22, complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ctcttgctcttgctcccccc 37
             ||||||||||||||||||||
Sbjct: 30975 ctcttgctcttgctcccccc 30956
to top
>ref|XM_956989.1| Neurospora crassa OR74A hypothetical protein (NCU07949.1) partial
            mRNA
          Length = 8481

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   tgctcttgctcttgctcccc 35
            ||||||||||||||||||||
Sbjct: 5488 tgctcttgctcttgctcccc 5469
to top
>ref|XM_328654.1| Neurospora crassa OR74A hypothetical protein (NCU07949.1) partial
            mRNA
          Length = 8481

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   tgctcttgctcttgctcccc 35
            ||||||||||||||||||||
Sbjct: 5488 tgctcttgctcttgctcccc 5469
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 293     cggcgtgttcgacggccacg 312
               ||||||||||||||||||||
Sbjct: 1694401 cggcgtgttcgacggccacg 1694382
to top
>gb|AC121592.3| Mus musculus BAC clone RP23-292K4 from 8, complete sequence
          Length = 186807

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 16     tgctcttgctcttgctc-ccccctcccc 42
              ||||||||||||||||| ||||||||||
Sbjct: 147578 tgctcttgctcttgctctccccctcccc 147551
to top
>emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on chromosome 9 Contains a
              eukaryotic translation initiation factor 4B (EIF4B)
              pseudogene and part of a novel gene, complete sequence
          Length = 173916

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gaggaaggtggcctccctct 210
              ||||||||||||||||||||
Sbjct: 124919 gaggaaggtggcctccctct 124900
to top
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 2/10
          Length = 349887

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   ctcgggcagcaggggcagga 130
             ||||||||||||||||||||
Sbjct: 83276 ctcgggcagcaggggcagga 83295
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 293     cggcgtgttcgacggccacg 312
               ||||||||||||||||||||
Sbjct: 3029363 cggcgtgttcgacggccacg 3029344
to top
>gb|AC182739.1| Gasterosteus aculeatus clone VMRC26-26K03, complete sequence
          Length = 171340

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ggcgtgttcgacggccacgg 313
             ||||||||||||||||||||
Sbjct: 84886 ggcgtgttcgacggccacgg 84867
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 293     cggcgtgttcgacggccacg 312
               ||||||||||||||||||||
Sbjct: 2178170 cggcgtgttcgacggccacg 2178151
to top
>dbj|AK044295.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930006B13 product:unclassifiable, full insert
            sequence
          Length = 2998

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   tcttgctcccccctccccgc 44
            ||||||||||||||||||||
Sbjct: 2204 tcttgctcccccctccccgc 2223
to top
>emb|BX818176.1|CNS0AEES Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL64ZH09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 424

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  tcttgctcccccctccccgc 44
           ||||||||||||||||||||
Sbjct: 350 tcttgctcccccctccccgc 369
to top
>gb|AC154818.2| Mus musculus BAC clone RP23-73C20 from chromosome 16, complete sequence
          Length = 183223

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ctcttgctcttgctcccccc 37
             ||||||||||||||||||||
Sbjct: 80840 ctcttgctcttgctcccccc 80821
to top
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ctcgggcagcaggggcagga 130
              ||||||||||||||||||||
Sbjct: 431298 ctcgggcagcaggggcagga 431317
to top
>gb|AC141634.4| Mus musculus BAC clone RP24-69A18 from chromosome 6, complete sequence
          Length = 227680

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     ctcttgctcttgctcccccc 37
              ||||||||||||||||||||
Sbjct: 123481 ctcttgctcttgctcccccc 123500
to top
>gb|AE005085.1| Halobacterium sp. NRC-1 section 116 of 170 of the complete genome
          Length = 14152

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  ggcgaacgccgacgaccccg 426
            ||||||||||||||||||||
Sbjct: 3545 ggcgaacgccgacgaccccg 3564
to top
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
             sequence
          Length = 118971

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   cgaggaaggaggaggcggcg 180
             ||||||||||||||||||||
Sbjct: 91651 cgaggaaggaggaggcggcg 91632
to top
>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete
              sequences
          Length = 172173

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctcttgctcttgctcccccc 37
              ||||||||||||||||||||
Sbjct: 135203 ctcttgctcttgctcccccc 135184
to top
>gb|AC125520.3| Mus musculus BAC clone RP24-281J17 from 8, complete sequence
          Length = 178227

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 16     tgctcttgctcttgctc-ccccctcccc 42
              ||||||||||||||||| ||||||||||
Sbjct: 171802 tgctcttgctcttgctctccccctcccc 171829
to top
>gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, complete sequence
          Length = 164783

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctcttgctcttgctcccccc 37
              ||||||||||||||||||||
Sbjct: 126124 ctcttgctcttgctcccccc 126105
to top
>gb|AC160120.2| Mus musculus BAC clone RP23-407B7 from chromosome 14, complete sequence
          Length = 202981

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tcttgctcttgctcccccct 38
              ||||||||||||||||||||
Sbjct: 112018 tcttgctcttgctcccccct 112037
to top
>emb|AL603868.15| Mouse DNA sequence from clone RP23-101J23 on chromosome 11, complete
              sequence
          Length = 209068

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tcttgctcccccctccccgc 44
              ||||||||||||||||||||
Sbjct: 146952 tcttgctcccccctccccgc 146971


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,937,404
Number of Sequences: 3902068
Number of extensions: 3937404
Number of successful extensions: 106316
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 104954
Number of HSP's gapped (non-prelim): 1364
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top