ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet99f09 |
|---|---|
| Clone Library Name | barley_pub |
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 232 bits (591), Expect = 3e-61 Identities = 112/123 (91%), Positives = 115/123 (93%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S N A LGSVSNGGRIRCMQVWPIEGIKKF Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRS-NGASLGSVSNGGRIRCMQVWPIEGIKKF 59 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPLSTE LLKQVDYLIRSKWVPCLEF KVGFIFREHN SPGYYDGRYWTMWKLP Sbjct: 60 ETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFRKVGFIFREHNVSPGYYDGRYWTMWKLP 119 Query: 404 MFG 412 MFG Sbjct: 120 MFG 122
>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 Score = 229 bits (585), Expect = 1e-60 Identities = 112/123 (91%), Positives = 115/123 (93%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S A SVSNGGRIRCMQVWPIEGIKKF Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSN--ASSASVSNGGRIRCMQVWPIEGIKKF 58 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP Sbjct: 59 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 118 Query: 404 MFG 412 MFG Sbjct: 119 MFG 121
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 Score = 228 bits (582), Expect = 3e-60 Identities = 109/123 (88%), Positives = 115/123 (93%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAP VM+S+AT VAPFQGLKSTAGLP+S SG+ GL SVSNGGRIRCMQVWPIEGIKKF Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPISCRSGST-GLSSVSNGGRIRCMQVWPIEGIKKF 59 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLP Sbjct: 60 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLP 119 Query: 404 MFG 412 MFG Sbjct: 120 MFG 122
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 Score = 226 bits (576), Expect = 2e-59 Identities = 109/123 (88%), Positives = 114/123 (92%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAP VM+S+AT VAPFQGLKSTAGLPVSR S + LGSVSNGGRIRCMQVWPIEGIKKF Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSRGS--LGSVSNGGRIRCMQVWPIEGIKKF 58 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPLSTEAL KQVDYLIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLP Sbjct: 59 ETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLP 118 Query: 404 MFG 412 MFG Sbjct: 119 MFG 121
>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 175 Score = 216 bits (549), Expect = 2e-56 Identities = 99/123 (80%), Positives = 115/123 (93%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAP+VM+S+AT VAPFQGLKSTAG+PV+R SGN++ G+VSNGGRIRCMQVWPIEGIKKF Sbjct: 1 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSS-FGNVSNGGRIRCMQVWPIEGIKKF 59 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP Sbjct: 60 ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119 Query: 404 MFG 412 MFG Sbjct: 120 MFG 122
>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) Length = 175 Score = 213 bits (542), Expect = 1e-55 Identities = 100/123 (81%), Positives = 114/123 (92%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S N+ G G+VSNGGRI+ MQVWPIEGIKKF Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNS-GFGNVSNGGRIKFMQVWPIEGIKKF 59 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP Sbjct: 60 ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119 Query: 404 MFG 412 MFG Sbjct: 120 MFG 122
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 170 Score = 198 bits (503), Expect = 5e-51 Identities = 96/124 (77%), Positives = 109/124 (87%), Gaps = 1/124 (0%) Frame = +2 Query: 44 MAPTVM-SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKK 220 MAPTVM +S+ATAVAPFQGLKSTA LPV+R S + LG+VSNGGRIRCMQVWP G KK Sbjct: 1 MAPTVMMASSATAVAPFQGLKSTASLPVARRSSRS--LGNVSNGGRIRCMQVWPAYGNKK 58 Query: 221 FGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKL 400 F TLSYLPPLST+ LLKQVDYL+R+ W+PCLEFSKVGF++RE++ SP YYDGRYWTMWKL Sbjct: 59 FETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKL 118 Query: 401 PMFG 412 PMFG Sbjct: 119 PMFG 122
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 191 bits (485), Expect = 6e-49 Identities = 92/123 (74%), Positives = 102/123 (82%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MA TVM+S+ATA APFQGLKSTA LPV+R S L VSNGGRIRCMQVWP G KKF Sbjct: 1 MALTVMASSATAAAPFQGLKSTASLPVARRS--TTSLAKVSNGGRIRCMQVWPAYGNKKF 58 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPL+ E LLKQVDYL+R+ WVPCLEFSK GF++RE++ SP YYDGRYWTMWKLP Sbjct: 59 ETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLP 118 Query: 404 MFG 412 MFG Sbjct: 119 MFG 121
>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 172 Score = 169 bits (429), Expect = 2e-42 Identities = 82/123 (66%), Positives = 97/123 (78%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MAP+VM+S+AT VAPFQG ++ P R + L +GGRIRCMQVWPIEGIKKF Sbjct: 1 MAPSVMASSATTVAPFQG---SSPPPACRRPPSELQLRQRQHGGRIRCMQVWPIEGIKKF 57 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 TLSYLPPL+ E LLKQ++YL + VPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP Sbjct: 58 ETLSYLPPLTVEDLLKQIEYLAPFQVVPCLEFSKVGFVYRENHKSPGYYDGRYWTMWKLP 117 Query: 404 MFG 412 MFG Sbjct: 118 MFG 120
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5B) Length = 177 Score = 168 bits (425), Expect = 5e-42 Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 10/133 (7%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA ++M+S A VAPF GL+S+ P +R + N SNGGR+ CMQ Sbjct: 1 MASSMMASTAAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLST-LPSNGGRVSCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYD 373 VWP EG+KKF TLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYD Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYD 119 Query: 374 GRYWTMWKLPMFG 412 GRYWTMWKLPMFG Sbjct: 120 GRYWTMWKLPMFG 132
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5A) Length = 177 Score = 168 bits (425), Expect = 5e-42 Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 10/133 (7%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA ++M+S A VAPF GL+S+ P +R + N SNGGR+ CMQ Sbjct: 1 MASSMMASTAAVARAGPAQSSMVAPFNGLRSSVAFPATRKANNDLST-LPSNGGRVSCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYD 373 VWP EG+KKF TLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYD Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYD 119 Query: 374 GRYWTMWKLPMFG 412 GRYWTMWKLPMFG Sbjct: 120 GRYWTMWKLPMFG 132
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1/4) Length = 179 Score = 167 bits (424), Expect = 7e-42 Identities = 83/132 (62%), Positives = 102/132 (77%), Gaps = 7/132 (5%) Frame = +2 Query: 38 STMAPTVMSSAATA------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQV 196 STM +V ++A A VAPF GLKST+ PV++ A GL ++ SNGGR++CM+V Sbjct: 5 STMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKP--ATGLSTLPSNGGRVQCMKV 62 Query: 197 WPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDG 376 WPI G+KKF TLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDG Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDG 122 Query: 377 RYWTMWKLPMFG 412 RYWTMWKLPMFG Sbjct: 123 RYWTMWKLPMFG 134
>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 179 Score = 166 bits (420), Expect = 2e-41 Identities = 82/131 (62%), Positives = 101/131 (77%), Gaps = 11/131 (8%) Frame = +2 Query: 53 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 199 T++SS ATA VAPF GLKS + PV++ + A GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAACAAPAQASMVAPFVGLKSASAFPVTQKT--ATGLSTLPSNGGRVQCMKVW 63 Query: 200 PIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGR 379 PI G+KKF TLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGR Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGR 123 Query: 380 YWTMWKLPMFG 412 YWTMWKLPMFG Sbjct: 124 YWTMWKLPMFG 134
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A) Length = 180 Score = 166 bits (419), Expect = 3e-41 Identities = 80/131 (61%), Positives = 99/131 (75%), Gaps = 5/131 (3%) Frame = +2 Query: 35 LSTMAPTVMSSAAT----AVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWP 202 +S+ A T +S A+T AVAPF GLKS G PV +++ + + SNGGR++CMQVWP Sbjct: 5 ISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPVKKVNTDITSI--TSNGGRVKCMQVWP 62 Query: 203 IEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGR 379 G KKF TLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++REHN SPGYYDGR Sbjct: 63 PIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGR 122 Query: 380 YWTMWKLPMFG 412 YWTMWKLPMFG Sbjct: 123 YWTMWKLPMFG 133
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 181 Score = 166 bits (419), Expect = 3e-41 Identities = 80/134 (59%), Positives = 99/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +++SSAA A VAPF GLKS A PV++ + N SNGGR+RCMQ Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++REHN+SPGYY Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYY 120 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 121 DGRYWTMWKLPMFG 134
>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 179 Score = 165 bits (418), Expect = 3e-41 Identities = 82/131 (62%), Positives = 100/131 (76%), Gaps = 11/131 (8%) Frame = +2 Query: 53 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 199 T++SS ATA VAPF GLKS + PV++ A GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKP--ATGLSTLPSNGGRVQCMKVW 63 Query: 200 PIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGR 379 PI G+KKF TLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGR Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGR 123 Query: 380 YWTMWKLPMFG 412 YWTMWKLPMFG Sbjct: 124 YWTMWKLPMFG 134
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU26) Length = 177 Score = 165 bits (417), Expect = 4e-41 Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCM 190 MA ++M+S A VAPF GL+S+ P +R + L ++ SNGG++ CM Sbjct: 1 MASSMMASTAAVARAGPAQSNMVAPFNGLRSSVAFPATRKANK--NLSTLPSNGGKVSCM 58 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 370 QVWP EG+KKF TLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYY Sbjct: 59 QVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYY 118 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 119 DGRYWTMWKLPMFG 132
>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 179 Score = 164 bits (416), Expect = 6e-41 Identities = 81/131 (61%), Positives = 100/131 (76%), Gaps = 11/131 (8%) Frame = +2 Query: 53 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 199 T++SS ATA VAPF GLKS + PV++ + GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKT--VTGLSTLPSNGGRVQCMKVW 63 Query: 200 PIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGR 379 PI G+KKF TLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGR Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGR 123 Query: 380 YWTMWKLPMFG 412 YWTMWKLPMFG Sbjct: 124 YWTMWKLPMFG 134
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40B) Length = 177 Score = 164 bits (416), Expect = 6e-41 Identities = 79/133 (59%), Positives = 96/133 (72%), Gaps = 10/133 (7%) Frame = +2 Query: 44 MAPTVMSSAATAVA----------PFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA ++M+S A AVA PF +S+ P +R + N SNGGR+ CMQ Sbjct: 1 MASSMMASTAAAVARAGPAQTNMVPFNACRSSVPFPATRKANNDLST-LPSNGGRVSCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYD 373 VWP EG+KKF TLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYD Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYD 119 Query: 374 GRYWTMWKLPMFG 412 GRYWTMWKLPMFG Sbjct: 120 GRYWTMWKLPMFG 132
>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 164 bits (415), Expect = 7e-41 Identities = 74/114 (64%), Positives = 92/114 (80%) Frame = +2 Query: 71 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPL 250 ++ VAPF GLKS + PV+R NA SNGGR++CM+VWPIEG+KKF TLSYLP + Sbjct: 21 SSMVAPFTGLKSASAFPVTR-KPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTM 79 Query: 251 STEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 EAL+KQ++YL+RSKW+PCLEF GF++RE++ SPGYYDGRYWTMWKLPMFG Sbjct: 80 KDEALVKQIEYLLRSKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMFG 133
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 164 bits (415), Expect = 7e-41 Identities = 75/115 (65%), Positives = 92/115 (80%), Gaps = 1/115 (0%) Frame = +2 Query: 71 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPL 250 A VAPF GLKS++ PV+R S + + S NGGR++CMQVWP G+KKF TLSYLPPL Sbjct: 24 ARMVAPFNGLKSSSAFPVTRKSNDITSIAS--NGGRVQCMQVWPPLGLKKFETLSYLPPL 81 Query: 251 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 S+E+L K+VDYL+R WVPCLEF + GF++RE++ SPGYYDGRYWTMWKLPMFG Sbjct: 82 SSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 164 bits (414), Expect = 1e-40 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 12/135 (8%) Frame = +2 Query: 44 MAPTVMSSAATA-----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 MA +V+SSAA A VAPF GLKST G P ++ + + L S NGGR++CM Sbjct: 1 MASSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLAS--NGGRVQCM 58 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGY 367 +VWP + +K++ TLSYLPPL+T+ L +QVDYL+ +KWVPCLEF + GF++REH+ SPGY Sbjct: 59 KVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGY 118 Query: 368 YDGRYWTMWKLPMFG 412 YDGRYWTMWKLPMFG Sbjct: 119 YDGRYWTMWKLPMFG 133
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3C) (PSS15) Length = 180 Score = 164 bits (414), Expect = 1e-40 Identities = 79/131 (60%), Positives = 98/131 (74%), Gaps = 5/131 (3%) Frame = +2 Query: 35 LSTMAPTVMSSAA----TAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWP 202 +S+ A T +S A+ AVAPF GLKS G PV +++ + + SNGGR++CMQVWP Sbjct: 5 ISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPVKKVNTDITSI--TSNGGRVKCMQVWP 62 Query: 203 IEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGR 379 G KKF TLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++REHN SPGYYDGR Sbjct: 63 PIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGR 122 Query: 380 YWTMWKLPMFG 412 YWTMWKLPMFG Sbjct: 123 YWTMWKLPMFG 133
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 183 Score = 164 bits (414), Expect = 1e-40 Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 +TMA ++ A VAPF GLKS + PV+R + + + S NGGR++CMQVWP G+K Sbjct: 11 TTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVAS--NGGRVQCMQVWPPLGMK 68 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 394 KF TLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 69 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 128 Query: 395 KLPMFG 412 KLPMFG Sbjct: 129 KLPMFG 134
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 163 bits (413), Expect = 1e-40 Identities = 76/115 (66%), Positives = 92/115 (80%), Gaps = 1/115 (0%) Frame = +2 Query: 71 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPL 250 A VAPF GLKS++ PV+R S + + S NGGR++CMQVWP G+KKF TLSYLPPL Sbjct: 24 ARMVAPFTGLKSSSASPVTRKSNDITSIAS--NGGRVQCMQVWPPLGLKKFETLSYLPPL 81 Query: 251 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 STE+L K+VDYL+R WVPCLEF + GF++RE++ SPGYYDGRYWTMWKLPMFG Sbjct: 82 STESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40A) Length = 177 Score = 163 bits (413), Expect = 1e-40 Identities = 79/134 (58%), Positives = 98/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATAVA----------PFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCM 190 MA ++M+S A AVA PF +S+ P +R + N L ++ NGGR+ CM Sbjct: 1 MASSMMASTAAAVARAGPAQSSMVPFNACRSSVPFPATRKANN--NLSTLPGNGGRVSCM 58 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 370 QVWP EG+KKF TLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYY Sbjct: 59 QVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYY 118 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 119 DGRYWTMWKLPMFG 132
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) Length = 180 Score = 163 bits (412), Expect = 2e-40 Identities = 84/134 (62%), Positives = 98/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +VMSSAA A VAPF GLKSTA PVSR N SNGGR+RCMQ Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVRCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 162 bits (409), Expect = 4e-40 Identities = 75/126 (59%), Positives = 93/126 (73%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 +TMA ++ A VAPF GLKS + PV+R + + + S NGGR++CMQVWP G K Sbjct: 11 TTMAAATTTAQANMVAPFNGLKSVSAFPVTRKNNDITSVAS--NGGRVQCMQVWPPLGKK 68 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 394 KF TLSYLPPLS E+L+K+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 69 KFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 128 Query: 395 KLPMFG 412 KLPMFG Sbjct: 129 KLPMFG 134
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) Length = 180 Score = 161 bits (407), Expect = 6e-40 Identities = 83/134 (61%), Positives = 97/134 (72%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +VMSSAA A VAPF GLKS A PVSR N SNGGR+RCMQ Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVRCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 161 bits (407), Expect = 6e-40 Identities = 74/118 (62%), Positives = 92/118 (77%), Gaps = 1/118 (0%) Frame = +2 Query: 62 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYL 241 S+ A+ APF GLKS PV++ + N SNGGR++CM+VWP G+KK+ TLSYL Sbjct: 17 STQASLAAPFTGLKSNVAFPVTKKANNDFS-SLPSNGGRVQCMKVWPPIGLKKYETLSYL 75 Query: 242 PPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 PPLS EAL K++DYLIR+KW+PCLEF + GF++REH+ SPGYYDGRYWTMWKLPMFG Sbjct: 76 PPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFG 133
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU1) Length = 173 Score = 161 bits (407), Expect = 6e-40 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSAAT-AVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 +ST A + A T V F G +S+ P +R + N S+GGR+ CMQVWP EG Sbjct: 3 VSTAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLST-LPSSGGRVSCMQVWPPEG 61 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 391 +KKF TLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE+NASPGYYDGRYWTM Sbjct: 62 LKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNASPGYYDGRYWTM 121 Query: 392 WKLPMFG 412 WKLPMFG Sbjct: 122 WKLPMFG 128
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 160 bits (406), Expect = 8e-40 Identities = 80/134 (59%), Positives = 98/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA ++MSSAA A VAPF GLKS A PVSR + N SNGGR+RCMQ Sbjct: 1 MASSIMSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKT-NLDITSIASNGGRVRCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS+E LL +++YL+++ WVPCLEF ++ GF++REH +SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) (LESS17) Length = 181 Score = 160 bits (406), Expect = 8e-40 Identities = 77/134 (57%), Positives = 98/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +++SSAA A VAPF GLKS A PV++ + N SNGGR+RCMQ Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE+N+SPGYY Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYY 120 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 121 DGRYWTMWKLPMFG 134
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 181 Score = 160 bits (405), Expect = 1e-39 Identities = 78/134 (58%), Positives = 98/134 (73%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +++SSAA A VAPF GLKS A PV++ + N SNGGR+RCMQ Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE++ SPGYY Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYY 120 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 121 DGRYWTMWKLPMFG 134
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 180 Score = 159 bits (403), Expect = 2e-39 Identities = 81/134 (60%), Positives = 97/134 (72%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +++SSAA A V PF GLKSTA PVSR N SNGGR+RCMQ Sbjct: 1 MASSIVSSAAVATRANGAQASMVGPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVRCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 159 bits (403), Expect = 2e-39 Identities = 78/127 (61%), Positives = 97/127 (76%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 +ST A + S A + V PF GL S+A PV+R +++ L S NG R+RCMQVWP EG Sbjct: 7 VSTAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLPS--NGLRVRCMQVWPPEG 64 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 391 KKF TLSYLPPL+ E L ++VDYLIR+ W+PC+EF KVGF++RE++ SPGYYDGRYWTM Sbjct: 65 KKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTM 124 Query: 392 WKLPMFG 412 WKLPMFG Sbjct: 125 WKLPMFG 131
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 186 Score = 159 bits (402), Expect = 2e-39 Identities = 78/127 (61%), Positives = 94/127 (74%), Gaps = 2/127 (1%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGI 214 +T A + A+ VAPF GLKS + PV+R S N L +V SNGG+++CMQVWP G Sbjct: 13 TTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSN--DLSTVPSNGGKVQCMQVWPPLGK 70 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTM 391 KKF TLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTM Sbjct: 71 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTM 130 Query: 392 WKLPMFG 412 WKLPMFG Sbjct: 131 WKLPMFG 137
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 157 bits (398), Expect = 7e-39 Identities = 76/131 (58%), Positives = 98/131 (74%), Gaps = 5/131 (3%) Frame = +2 Query: 35 LSTMAPTVMSSAATA----VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWP 202 +S+ A T ++ A++A VAPF GLKS+AG PV++ + N SNGGR+ CMQVWP Sbjct: 4 ISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDI-TSIASNGGRVNCMQVWP 62 Query: 203 IEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGR 379 G KKF TLSYLPPL+ E L K+V+YLIR W+PCLEF + GF++RE++ SPGYYDGR Sbjct: 63 PVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGR 122 Query: 380 YWTMWKLPMFG 412 YWTMW+LP+FG Sbjct: 123 YWTMWRLPLFG 133
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) Length = 180 Score = 157 bits (398), Expect = 7e-39 Identities = 78/132 (59%), Positives = 94/132 (71%), Gaps = 9/132 (6%) Frame = +2 Query: 44 MAPTVMSSA--------ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVW 199 MA +++SSA AT VAPF GLKS+A P +R + N SNGGR+ CMQVW Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDI-TSITSNGGRVNCMQVW 59 Query: 200 PIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDG 376 P G KKF TLSYLP L+ L K+VDYLIR+KW+PC+EF + GF++REH SPGYYDG Sbjct: 60 PPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDG 119 Query: 377 RYWTMWKLPMFG 412 RYWTMWKLP+FG Sbjct: 120 RYWTMWKLPLFG 131
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 157 bits (398), Expect = 7e-39 Identities = 77/135 (57%), Positives = 96/135 (71%), Gaps = 12/135 (8%) Frame = +2 Query: 44 MAPTVMSSAATA-----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 MA +++SSAA A VAPF GLKS A PV++ + + + + NGGR++CM Sbjct: 1 MASSMVSSAAVATVNRTPAQASMVAPFNGLKSVAAFPVTKKNNDITSVAT--NGGRVQCM 58 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGY 367 QVWP G KKF TLSYLPPLS E+L+K+V YL+ + WVPCLEF GF++REH +PGY Sbjct: 59 QVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGY 118 Query: 368 YDGRYWTMWKLPMFG 412 YDGRYWTMWKLPMFG Sbjct: 119 YDGRYWTMWKLPMFG 133
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 157 bits (397), Expect = 9e-39 Identities = 79/135 (58%), Positives = 97/135 (71%), Gaps = 3/135 (2%) Frame = +2 Query: 17 ACLSY*LSTMAPTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 AC +T+A +S A + VAPF LKST+ PV++ + N SNGGR++CM Sbjct: 2 ACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDI-TSIASNGGRVQCM 60 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGY 367 QVWP G+KKF TLSYLPPLS+E L K+VDYL+R +PCLEF + GF++REHN SPGY Sbjct: 61 QVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGY 120 Query: 368 YDGRYWTMWKLPMFG 412 YDGRYWTMWKLPMFG Sbjct: 121 YDGRYWTMWKLPMFG 135
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 182 Score = 157 bits (397), Expect = 9e-39 Identities = 75/126 (59%), Positives = 93/126 (73%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 +TMA ++ A VAPF GLKS + PV+R + + + S NGGR++CM VWP G+K Sbjct: 11 TTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVAS--NGGRVQCM-VWPPLGMK 67 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 394 KF TLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 127 Query: 395 KLPMFG 412 KLPMFG Sbjct: 128 KLPMFG 133
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 157 bits (396), Expect = 1e-38 Identities = 72/115 (62%), Positives = 88/115 (76%), Gaps = 1/115 (0%) Frame = +2 Query: 71 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPL 250 A+ VAPF GLKS + PV++ S + + S NGGR++CMQVWP G KKF TLSYLPPL Sbjct: 19 ASMVAPFTGLKSVSAFPVTKKSNDITSIAS--NGGRVQCMQVWPPLGKKKFETLSYLPPL 76 Query: 251 STEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFG 412 S E+L+K+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFG Sbjct: 77 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFG 131
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 157 bits (396), Expect = 1e-38 Identities = 74/126 (58%), Positives = 89/126 (70%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 S TV + A VAPF GLKS AG P + + + A + S NGGR++CMQVWP G K Sbjct: 8 SPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIAS--NGGRVQCMQVWPTTGKK 65 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 394 KF TLSYLP L L K+V+YL+R W+PCLEF + GF++REH+ SPGYYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMW 125 Query: 395 KLPMFG 412 KLPMFG Sbjct: 126 KLPMFG 131
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A/3C) Length = 180 Score = 156 bits (395), Expect = 2e-38 Identities = 80/134 (59%), Positives = 96/134 (71%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +VMSSAA A VAPF GLKSTA PVSR N SNGGR+ CMQ Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVSCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE++ SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) Length = 180 Score = 156 bits (394), Expect = 2e-38 Identities = 80/134 (59%), Positives = 95/134 (70%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +V+SSAA A VAPF GLKS A PVSR N SNGGR++CMQ Sbjct: 1 MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP KK+ TLSYLP LS E LL +++YL++S WVPCLEF ++ GF++REH+ SPGYY Sbjct: 60 VWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 156 bits (394), Expect = 2e-38 Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGI 214 LS+ A + AT VAPF GLKS++ PV+R + N VSNGGR+ CM+VWP G Sbjct: 6 LSSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDI-TSIVSNGGRVSCMKVWPPVGK 64 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTM 391 KKF TLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH ++PGYYDGRYWTM Sbjct: 65 KKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTM 124 Query: 392 WKLPMFG 412 WKLP+FG Sbjct: 125 WKLPLFG 131
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 155 bits (393), Expect = 3e-38 Identities = 75/127 (59%), Positives = 92/127 (72%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGI 214 LS+ A AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G Sbjct: 6 LSSAAVVTSQLQATMVAPFTGLKSSAAFPVTRKT-NTDITSIASNGGRVSCMKVWPPIGK 64 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTM 391 KKF TLSYLP LS L K+VDYL+R+KW+PC+EF + GF++REH ++PGYYDGRYWTM Sbjct: 65 KKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTM 124 Query: 392 WKLPMFG 412 WKLP+FG Sbjct: 125 WKLPLFG 131
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit F1) Length = 181 Score = 155 bits (393), Expect = 3e-38 Identities = 74/127 (58%), Positives = 93/127 (73%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGI 214 LS+ A + AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G Sbjct: 6 LSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDI-TSIASNGGRVSCMKVWPPVGK 64 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTM 391 KKF TLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH ++PGYYDGRYWTM Sbjct: 65 KKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTM 124 Query: 392 WKLPMFG 412 WKLP+FG Sbjct: 125 WKLPLFG 131
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU11A) Length = 180 Score = 155 bits (392), Expect = 3e-38 Identities = 80/134 (59%), Positives = 95/134 (70%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +VMSSAA A VAPF GLKS A PVSR N SNGGR++CMQ Sbjct: 1 MASSVMSSAAVATSTNAAQASMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP G KK+ TLSYLP L+ E LLK+++YL+ WVPCLEF ++ GF++RE++ASP YY Sbjct: 60 VWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) Length = 181 Score = 155 bits (392), Expect = 3e-38 Identities = 74/127 (58%), Positives = 92/127 (72%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGI 214 LS+ A + AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G Sbjct: 6 LSSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDI-TSITSNGGRVSCMKVWPPIGK 64 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTM 391 KKF TLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH +PGYYDGRYWTM Sbjct: 65 KKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTM 124 Query: 392 WKLPMFG 412 WKLP+FG Sbjct: 125 WKLPLFG 131
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) Length = 180 Score = 155 bits (391), Expect = 5e-38 Identities = 80/134 (59%), Positives = 95/134 (70%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +V+SSAA A VAPF GLKS A PVSR N SNGGR++CMQ Sbjct: 1 MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP KK+ TLSYLP LS E LL +V+YL+++ WVPCLEF ++ GF++RE+N SPGYY Sbjct: 60 VWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 155 bits (391), Expect = 5e-38 Identities = 80/134 (59%), Positives = 95/134 (70%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +V+SSAA A VAPF GLKS A PVSR N SNGGR++CMQ Sbjct: 1 MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP KK+ TLSYLP LS E LL +V+YL+++ WVPCLEF ++ GF++RE+N SPGYY Sbjct: 60 VWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 181 Score = 155 bits (391), Expect = 5e-38 Identities = 75/127 (59%), Positives = 92/127 (72%), Gaps = 1/127 (0%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGI 214 LS+ A + AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G Sbjct: 6 LSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKT-NKDITSIASNGGRVSCMKVWPPIGK 64 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTM 391 KKF TLSYLP LS L K+VDYL+R+KW+PC+EF + GF++REH +PGYYDGRYWTM Sbjct: 65 KKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTM 124 Query: 392 WKLPMFG 412 WKLP+FG Sbjct: 125 WKLPLFG 131
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 181 Score = 155 bits (391), Expect = 5e-38 Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 S+ A + AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G K Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDI-TSITSNGGRVSCMKVWPPIGKK 65 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 394 KF TLSYLP LS L K+VDYL+R+KW+PC+EF + GF++REH +PGYYDGRYWTMW Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMW 125 Query: 395 KLPMFG 412 KLP+FG Sbjct: 126 KLPLFG 131
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 181 Score = 155 bits (391), Expect = 5e-38 Identities = 79/135 (58%), Positives = 97/135 (71%), Gaps = 12/135 (8%) Frame = +2 Query: 44 MAPTVMSSAATA-----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 MA +V+SSAA A +APF GLKS A PVSR N SNGGR+RCM Sbjct: 1 MASSVISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQ-NLDITSIASNGGRVRCM 59 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGY 367 QVWP +KK+ TLSYLP L+ E LLK+V+YL+++ WVPCLEF ++ GF++RE++ SPGY Sbjct: 60 QVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGY 119 Query: 368 YDGRYWTMWKLPMFG 412 YDGRYWTMWKLPMFG Sbjct: 120 YDGRYWTMWKLPMFG 134
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 155 bits (391), Expect = 5e-38 Identities = 73/115 (63%), Positives = 87/115 (75%), Gaps = 1/115 (0%) Frame = +2 Query: 71 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPL 250 AT VAPF GLKSTA P +R S N SNGGR++CM+VWP G++KF TLSYLPPL Sbjct: 22 ATMVAPFTGLKSTAAFPATRKSNNDI-TSLASNGGRVQCMKVWPPLGLQKFETLSYLPPL 80 Query: 251 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 S E+L KQ++YLI W+PCLEF + F++RE+N SPGYYDGRYW MWKLPMFG Sbjct: 81 SIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFG 135
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 180 Score = 154 bits (390), Expect = 6e-38 Identities = 78/134 (58%), Positives = 96/134 (71%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +++SSAA A VAPF GLKSTA PVSR N SNGGR+ CMQ Sbjct: 1 MASSIVSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVSCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE++ SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 171 Score = 154 bits (389), Expect = 8e-38 Identities = 77/126 (61%), Positives = 89/126 (70%), Gaps = 3/126 (2%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAG---LGSVSNGGRIRCMQVWPIEGI 214 MA + AAT V+ F GLKSTA P S NAA + SNGGR+RCMQVWP G Sbjct: 1 MATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGN 60 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 KF TLSYLP L+ E L+K+V+YL+R+KWVPCLEF G I R++N SPGYYDGRYW MW Sbjct: 61 PKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMW 120 Query: 395 KLPMFG 412 KLPMFG Sbjct: 121 KLPMFG 126
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 153 bits (387), Expect = 1e-37 Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 4/130 (3%) Frame = +2 Query: 35 LSTMAPTVMSSA---ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPI 205 +S+ TV +A A VAPF GLKS A P ++ + + + L S NGGR++CM+VWP Sbjct: 4 ISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPS--NGGRVQCMKVWPP 61 Query: 206 EGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 382 G+KK+ TLSYLPPL+ L K+VDYL+R KWVPCLEF + GF++RE+ SPGYYDGRY Sbjct: 62 LGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRY 121 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 122 WTMWKLPMFG 131
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 153 bits (387), Expect = 1e-37 Identities = 74/126 (58%), Positives = 88/126 (69%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 S TV + A VAPF GLKS AGLP + + + + S NGGR++CMQVWP G K Sbjct: 8 SPAVTTVNRAGAGMVAPFTGLKSMAGLPTRKTNNDITSIAS--NGGRVQCMQVWPPVGKK 65 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 394 KF TLSYLP L L K+V+YL+R W+PCLEF + GF++REHN S GYYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMW 125 Query: 395 KLPMFG 412 KLPMFG Sbjct: 126 KLPMFG 131
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 177 Score = 153 bits (386), Expect = 2e-37 Identities = 79/130 (60%), Positives = 94/130 (72%), Gaps = 4/130 (3%) Frame = +2 Query: 35 LSTMAPTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIE 208 +S A S+AA A VAPF GLKST+ PVSR S N +NGGR+ CMQVWP Sbjct: 5 MSNAAVVTASTAAQANMVAPFSGLKSTSAFPVSRKS-NVDITSLATNGGRVNCMQVWPPR 63 Query: 209 GIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG--FIFREHNASPGYYDGRY 382 +KKF TLSYLP LS E+LLK+++YL+ WVPCLEF +VG ++RE+N SPGYYDGRY Sbjct: 64 NLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYRENNKSPGYYDGRY 122 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 123 WTMWKLPMFG 132
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 152 bits (385), Expect = 2e-37 Identities = 72/130 (55%), Positives = 95/130 (73%), Gaps = 4/130 (3%) Frame = +2 Query: 35 LSTMAPTVMSSA---ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPI 205 +S+ A T ++ A A PF GLKS+AG PV++ + + + SNG R+ CMQVWP Sbjct: 4 ISSAAVTTINRAPVQANLATPFTGLKSSAGFPVTKKNNDITSI--TSNGSRVNCMQVWPP 61 Query: 206 EGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 382 G KKF TLSYLPPL+ E LLK+V+YL+R WVPC+EF + GF+ R++N+SPGYYDGRY Sbjct: 62 VGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRY 121 Query: 383 WTMWKLPMFG 412 WTMW+LP+FG Sbjct: 122 WTMWRLPLFG 131
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 152 bits (385), Expect = 2e-37 Identities = 72/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 S TV + A VAPF GLKS AG P + + + A + S NGGR++CMQVWP G K Sbjct: 8 SPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIAS--NGGRVQCMQVWPTTGKK 65 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 394 KF TLSYLP L L K+V+YL+R W+PCLEF + GF++RE++ SPGYYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMW 125 Query: 395 KLPMFG 412 KLP+FG Sbjct: 126 KLPVFG 131
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 178 Score = 152 bits (385), Expect = 2e-37 Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 1/126 (0%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIK 217 S TV + A VAPF GLKS AG P + + + + S NGGR++CMQVWP G K Sbjct: 8 SPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIAS--NGGRVQCMQVWPPIGKK 65 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 394 KF TLSYLP L L K+V+YL+R W+PCLEF + GF++REHN SP YYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMW 125 Query: 395 KLPMFG 412 KLPMFG Sbjct: 126 KLPMFG 131
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) (LESS 5) Length = 180 Score = 152 bits (384), Expect = 3e-37 Identities = 77/134 (57%), Positives = 96/134 (71%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +V+SSAA A VAPF GLKS+A PV++ N SNGGR+ CMQ Sbjct: 1 MASSVISSAAVATRSNVTQASMVAPFTGLKSSATFPVTKKQ-NLDITSIASNGGRVSCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP +KK+ TLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE+N SPGYY Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) Length = 181 Score = 150 bits (380), Expect = 9e-37 Identities = 77/135 (57%), Positives = 93/135 (68%), Gaps = 12/135 (8%) Frame = +2 Query: 44 MAPTVMSSAATA-----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 MA +MSSAA +APF GLKS PVSR N SNGGR++CM Sbjct: 1 MAFLIMSSAAAVATGTNAAQASMIAPFTGLKSATSFPVSRKQ-NLDITSIASNGGRVQCM 59 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGY 367 QVWP KK+ TLSYLP LS E LL++V+YL+++ WVPCLEF ++ GF++RE+N SPGY Sbjct: 60 QVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGY 119 Query: 368 YDGRYWTMWKLPMFG 412 YDGRYWTMWKLPMFG Sbjct: 120 YDGRYWTMWKLPMFG 134
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 150 bits (379), Expect = 1e-36 Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 1/120 (0%) Frame = +2 Query: 56 VMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLS 235 V + AT VAPF GLKST P +R + N+ SNGG+++CM+VWP G+KKF TLS Sbjct: 17 VSPAQATMVAPFTGLKSTPVFPTTRKT-NSDITSITSNGGKVQCMKVWPTLGMKKFETLS 75 Query: 236 YLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 YLPPL+ E L +V+YL+RS W+PCLEF + G ++REH PGYYDGRYWTMWKLPMFG Sbjct: 76 YLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFG 135
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU8) Length = 180 Score = 150 bits (379), Expect = 1e-36 Identities = 77/134 (57%), Positives = 93/134 (69%), Gaps = 11/134 (8%) Frame = +2 Query: 44 MAPTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 193 MA +V+SSAA A VAPF GLKS PVS N SNGGR++CMQ Sbjct: 1 MASSVISSAAVATRTNVAQASMVAPFNGLKSAVSFPVSSKQ-NLDITSIASNGGRVQCMQ 59 Query: 194 VWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYY 370 VWP G KK+ TLSYLP L+ E LLK+++YL+ WVPCLEF ++ GF++RE++ASP YY Sbjct: 60 VWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYY 119 Query: 371 DGRYWTMWKLPMFG 412 DGRYWTMWKLPMFG Sbjct: 120 DGRYWTMWKLPMFG 133
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 184 Score = 149 bits (376), Expect = 2e-36 Identities = 76/138 (55%), Positives = 93/138 (67%), Gaps = 15/138 (10%) Frame = +2 Query: 44 MAPTVMSSAATAVA--------------PFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRI 181 MA ++MS+AATAVA PF GLKS A PV+R S + + S NGGR+ Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSNDITSIAS--NGGRV 58 Query: 182 RCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 358 +CMQVWP G KKF TLSYLPPLS LL QV YL+ W+PC+EF + F++RE++ S Sbjct: 59 QCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRS 118 Query: 359 PGYYDGRYWTMWKLPMFG 412 PGY DGRYWTMWKLPM+G Sbjct: 119 PGYQDGRYWTMWKLPMYG 136
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 180 Score = 149 bits (375), Expect = 3e-36 Identities = 75/135 (55%), Positives = 93/135 (68%), Gaps = 12/135 (8%) Frame = +2 Query: 44 MAPTVMSSAATAV-----------APFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 MA ++MS+A TAV APF GLKS A PV+R S + + S NGGR++CM Sbjct: 1 MASSLMSNAITAVVGASGAQANMVAPFNGLKSIASFPVTRKSNDITSIAS--NGGRVQCM 58 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGY 367 QVWP G KKF TLSYLPPLS LL QV YL+ + W+PC+EF + F++RE++ SPGY Sbjct: 59 QVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGY 118 Query: 368 YDGRYWTMWKLPMFG 412 DGRYWTMWKLPM+G Sbjct: 119 QDGRYWTMWKLPMYG 133
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 149 bits (375), Expect = 3e-36 Identities = 73/136 (53%), Positives = 95/136 (69%), Gaps = 13/136 (9%) Frame = +2 Query: 44 MAPTVMSSAATA------------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRC 187 MA +++SSAA A VAPF GLKS+AG P++R N SN G+++C Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITR-KNNVDITTLASNAGKVQC 59 Query: 188 MQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPG 364 M+VWP G++KF TLSYLP +S E L K+ DYL+R+ WVPC+EF GF++RE++ SPG Sbjct: 60 MKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPG 119 Query: 365 YYDGRYWTMWKLPMFG 412 +YDGRYWTMWKLPMFG Sbjct: 120 FYDGRYWTMWKLPMFG 135
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 148 bits (374), Expect = 4e-36 Identities = 75/128 (58%), Positives = 92/128 (71%), Gaps = 3/128 (2%) Frame = +2 Query: 38 STMAPTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 +T+A SS A A VAPF GLKS + PV+R + N SNGGR++CMQVWP G Sbjct: 9 ATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDI-TSLASNGGRVQCMQVWPPLG 67 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 KKF TLSYLP L+ L K+VDYL+RSKW+PCLEF + GF+ R++++ P YYDGRYWT Sbjct: 68 KKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWT 127 Query: 389 MWKLPMFG 412 MWKLPMFG Sbjct: 128 MWKLPMFG 135
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 148 bits (374), Expect = 4e-36 Identities = 74/130 (56%), Positives = 94/130 (72%), Gaps = 4/130 (3%) Frame = +2 Query: 35 LSTMAPTVMSSA---ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPI 205 +S+ TV +A A VAPF GLKS A P ++ + + + L S NGGR++CM+VWP Sbjct: 4 ISSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPS--NGGRVQCMKVWPP 61 Query: 206 EGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 382 G KK+ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRY Sbjct: 62 LGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRY 121 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 122 WTMWKLPMFG 131
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 147 bits (372), Expect = 7e-36 Identities = 75/132 (56%), Positives = 95/132 (71%), Gaps = 6/132 (4%) Frame = +2 Query: 35 LSTMAPTVMSSAATA----VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 199 LST A ++ A+ A VAPF GLKST+ P +R + + S+ SNGGR++CMQVW Sbjct: 6 LSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKT--TTDITSIASNGGRVQCMQVW 63 Query: 200 PIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDG 376 P G K + TLSYLPPL+ E L K+V+YL+R WVPCLEF + G ++RE++ SPGYYDG Sbjct: 64 PPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDG 123 Query: 377 RYWTMWKLPMFG 412 RYWTMWKLPMFG Sbjct: 124 RYWTMWKLPMFG 135
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) Length = 173 Score = 147 bits (372), Expect = 7e-36 Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 2/128 (1%) Frame = +2 Query: 35 LSTMAPTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 ++++ TV + A A VAPF GLKS A PV++ + + L S NGGR++CM+VWP G Sbjct: 1 MASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLAS--NGGRVQCMKVWPPLG 58 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 K++ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWT Sbjct: 59 KKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 118 Query: 389 MWKLPMFG 412 MWKLPMFG Sbjct: 119 MWKLPMFG 126
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 173 Score = 147 bits (372), Expect = 7e-36 Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 2/128 (1%) Frame = +2 Query: 35 LSTMAPTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 ++++ TV + A A VAPF GLK+ A PV++ + + L S NGGR++CM+VWP G Sbjct: 1 MASIPATVAAVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLG 58 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 KK+ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWT Sbjct: 59 KKKYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 118 Query: 389 MWKLPMFG 412 MWKLPMFG Sbjct: 119 MWKLPMFG 126
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 173 Score = 147 bits (372), Expect = 7e-36 Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 2/128 (1%) Frame = +2 Query: 35 LSTMAPTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 ++++ TV + A A VAPF GLKS A PV++ + + L S NGGR++CM+VWP G Sbjct: 1 MASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLG 58 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 K++ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWT Sbjct: 59 KKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 118 Query: 389 MWKLPMFG 412 MWKLPMFG Sbjct: 119 MWKLPMFG 126
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 173 Score = 147 bits (371), Expect = 9e-36 Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 2/128 (1%) Frame = +2 Query: 35 LSTMAPTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 ++++ TV + A A VAPF GLK+ A PV++ + + L S NGGR++CM+VWP G Sbjct: 1 MASIPATVATVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLG 58 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 KK+ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWT Sbjct: 59 KKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 118 Query: 389 MWKLPMFG 412 MWKLPMFG Sbjct: 119 MWKLPMFG 126
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 173 Score = 147 bits (370), Expect = 1e-35 Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 2/128 (1%) Frame = +2 Query: 35 LSTMAPTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 ++++ TV + A A VAPF GLKS A PV++ + + L S NGGR++CM+VWP G Sbjct: 1 MASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLG 58 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 K++ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWT Sbjct: 59 KKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 118 Query: 389 MWKLPMFG 412 MWKLPMFG Sbjct: 119 MWKLPMFG 126
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 173 Score = 146 bits (369), Expect = 2e-35 Identities = 69/112 (61%), Positives = 86/112 (76%), Gaps = 1/112 (0%) Frame = +2 Query: 80 VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTE 259 VAPF GLK+ A PV++ + L S NGGR++CM+VWP G KK+ TLSYLP L+ Sbjct: 17 VAPFTGLKANAAFPVTKKVNGFSTLPS--NGGRVQCMKVWPPVGKKKYETLSYLPELTEA 74 Query: 260 ALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 L K+VDYL+R+KWVPCLEF + GF++RE+ +SPGYYDGRYWTMWKLPMFG Sbjct: 75 QLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFG 126
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 187 Score = 146 bits (368), Expect = 2e-35 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 2/127 (1%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGI 214 +T+A ++ A+ +A F GLKS A PV+R + S+ SNGGR+ CM VWP Sbjct: 9 ATVATGANAAQASMIASFNGLKSAASFPVTRKQD--LDITSIASNGGRVECMLVWPPINK 66 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTM 391 KK+ TLSYLP LS E LLK+++YL++ WVPCLEF ++ GF++REH+ SPGYYDGRYWTM Sbjct: 67 KKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTM 126 Query: 392 WKLPMFG 412 WKLPMFG Sbjct: 127 WKLPMFG 133
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 178 Score = 145 bits (367), Expect = 3e-35 Identities = 72/130 (55%), Positives = 93/130 (71%), Gaps = 4/130 (3%) Frame = +2 Query: 35 LSTMAPTVMSSA---ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPI 205 +S+ TV +A A VAPF GLKS P ++ + + + L S NGGR++CM+VWP Sbjct: 4 ISSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPS--NGGRVQCMKVWPP 61 Query: 206 EGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 382 G K++ TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRY Sbjct: 62 LGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRY 121 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 122 WTMWKLPMFG 131
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 183 Score = 144 bits (363), Expect = 8e-35 Identities = 72/128 (56%), Positives = 89/128 (69%), Gaps = 3/128 (2%) Frame = +2 Query: 38 STMAPTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 211 + MA T ++ A A VAPF GLKS A P+++ S N SNGGR++CMQVWP G Sbjct: 9 AAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFS-SLPSNGGRVQCMQVWPPVG 67 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 388 KKF TLSYLPPLS LL QV YL+ W+PC+EF + F++RE++ SPGY DGRYWT Sbjct: 68 KKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWT 127 Query: 389 MWKLPMFG 412 MWKLPM+G Sbjct: 128 MWKLPMYG 135
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 139 bits (351), Expect = 2e-33 Identities = 68/129 (52%), Positives = 86/129 (66%), Gaps = 3/129 (2%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAG---LGSVSNGGRIRCMQVWPI 205 ++ +A + + V+ F GLKS A P S+ NA + SNG R+RCMQVWP Sbjct: 14 VAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPP 73 Query: 206 EGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYW 385 KKF TLSYLP L+ E L+K+V+YL+++KWVPCLEF + G I R + SPGYYDGRYW Sbjct: 74 YANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGYYDGRYW 133 Query: 386 TMWKLPMFG 412 MWKLPMFG Sbjct: 134 VMWKLPMFG 142
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1) (Fragment) Length = 136 Score = 133 bits (335), Expect = 1e-31 Identities = 59/84 (70%), Positives = 69/84 (82%), Gaps = 1/84 (1%) Frame = +2 Query: 164 SNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIF 340 SNG R++CMQVWP G KKF TLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++ Sbjct: 6 SNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVY 65 Query: 341 REHNASPGYYDGRYWTMWKLPMFG 412 EHN SP YYDGRYWTMWKLPMFG Sbjct: 66 GEHNKSPRYYDGRYWTMWKLPMFG 89
>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512| (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 Score = 133 bits (334), Expect = 2e-31 Identities = 59/60 (98%), Positives = 60/60 (100%) Frame = +2 Query: 233 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 +YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 60
>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 125 bits (313), Expect = 5e-29 Identities = 61/118 (51%), Positives = 74/118 (62%), Gaps = 1/118 (0%) Frame = +2 Query: 62 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGIKKFGTLSY 238 +SAA+ Q + AGL G + +NG R+ CMQVW KF TLSY Sbjct: 16 ASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSY 75 Query: 239 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 LPPLS +AL KQ+DY+I+S W PC+EF G + RE + PGYYDGRYWTMWKLPMFG Sbjct: 76 LPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFG 133
>RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 123 Score = 120 bits (301), Expect = 1e-27 Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 1/76 (1%) Frame = +2 Query: 188 MQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPG 364 MQVWP G+KKF TLSYLPPL+TE LL +V+YL+ W+P LEF K GF++REH+ SPG Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPG 60 Query: 365 YYDGRYWTMWKLPMFG 412 YYDGRYWTMWKLPMFG Sbjct: 61 YYDGRYWTMWKLPMFG 76
>RBS_BATOE (P26985) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 87.4 bits (215), Expect = 1e-17 Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 9/93 (9%) Frame = +2 Query: 161 VSNG--GRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKV 328 +SNG + R M VW K F T SYLPPL+ + + KQVDY++R+ W PCLEF S Sbjct: 25 LSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQ 84 Query: 329 GFIFREHNASPG-----YYDGRYWTMWKLPMFG 412 ++ ++ G Y D RYWTMWKLPMFG Sbjct: 85 AYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFG 117
>RBS2_CHLRE (P08475) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 185 Score = 86.7 bits (213), Expect = 2e-17 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 7/130 (5%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MA + S+ +A S + + + AA + + + + M VW K F Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMF 57 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRY 382 T SYLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RY Sbjct: 58 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 117 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 118 WTMWKLPMFG 127
>RBS_CHLMO (P17537) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 86.7 bits (213), Expect = 2e-17 Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 7/81 (8%) Frame = +2 Query: 191 QVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REH 349 +VW K++ T SYLPPL+ + + +QVDY+I + W PCLEF+ F R Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQ 89 Query: 350 NASPGYYDGRYWTMWKLPMFG 412 S GYYD RYWTMWKLPMFG Sbjct: 90 GVSAGYYDNRYWTMWKLPMFG 110
>RBS5_ACECL (P16133) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 184 Score = 86.7 bits (213), Expect = 2e-17 Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 7/130 (5%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MA +M+ T V G ++ +P +++ N G S + R M VW K F Sbjct: 1 MAAAMMNK--TIVVSKDGCARSSSIP--KVATNKMGFASAVAMKKSREMMVWQPFNNKMF 56 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRY 382 T SYLPPL+ E + KQVDY++ + W PCLEF S + E+ G Y D RY Sbjct: 57 ETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRY 116 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 117 WTMWKLPMFG 126
>RBS1_CHLRE (P00873) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 185 Score = 86.3 bits (212), Expect = 3e-17 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 7/130 (5%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MA + S+ +A S + + + AA + + + + M VW K F Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMF 57 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRY 382 T SYLPPL+ E + QVDY++ + W+PCLEF++ + R + S YYD RY Sbjct: 58 ETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRY 117 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 118 WTMWKLPMFG 127
>RBS_EUGGR (P16881) Ribulose bisphosphate carboxylase small chains,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunits) [Contains: Ribulose bisphosphate carboxylase small chain P1; Ribulose bisphosphate carboxylase small chain P2; Ribulose bispho Length = 1273 Score = 85.5 bits (210), Expect = 4e-17 Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 7/104 (6%) Frame = +2 Query: 122 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKW 301 V R SG+++ G + G + M+VW KKF T SYLPPLS + KQVD +I Sbjct: 688 VQRPSGSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 746 Query: 302 VPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPMFG 412 PCLEF+ + FI ++ + GYYD RYWTMWKLPMFG Sbjct: 747 SPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFG 790 Score = 83.6 bits (205), Expect = 2e-16 Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Frame = +2 Query: 122 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKW 301 V R SG+++ G + G + M+VW KKF T SYLPPLS + KQVD +I Sbjct: 401 VQRPSGSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 459 Query: 302 VPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPMFG 412 PCLEF+ + FI ++ + GYYD YWTMWKLPMFG Sbjct: 460 SPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFG 503 Score = 83.2 bits (204), Expect = 2e-16 Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 7/122 (5%) Frame = +2 Query: 68 AATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPP 247 A+ + P GL + L ++ + A + ++ + M+VW KKF T SYLPP Sbjct: 98 ASAILFPLSGLFAAVALKMAMMKPKVAAVLPFTSE---KDMKVWNPVNNKKFETFSYLPP 154 Query: 248 LSTEALLKQVDYLIRSKWVPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPM 406 LS + KQVD +I PCLEF+ + FI ++ + GYYD RYWTMWKLPM Sbjct: 155 LSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPM 214 Query: 407 FG 412 FG Sbjct: 215 FG 216 Score = 82.4 bits (202), Expect = 4e-16 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Frame = +2 Query: 122 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKW 301 V R SG+++ ++ + M+VW KKF T SYLPPLS + KQVD +I Sbjct: 975 VQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 1034 Query: 302 VPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPMFG 412 PCLEF+ + FI ++ + GYYD RYWTMWKLPMFG Sbjct: 1035 SPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFG 1078 Score = 82.4 bits (202), Expect = 4e-16 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Frame = +2 Query: 122 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKW 301 V R SG+++ ++ + M+VW KKF T SYLPPLS + KQVD +I Sbjct: 544 VQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 603 Query: 302 VPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPMFG 412 PCLEF+ + FI ++ + GYYD RYWTMWKLPMFG Sbjct: 604 SPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFG 647 Score = 82.4 bits (202), Expect = 4e-16 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Frame = +2 Query: 122 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKW 301 V R SG+++ ++ + M+VW KKF T SYLPPLS + KQVD +I Sbjct: 257 VQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 316 Query: 302 VPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPMFG 412 PCLEF+ + FI ++ + GYYD RYWTMWKLPMFG Sbjct: 317 SPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFG 360 Score = 82.0 bits (201), Expect = 5e-16 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Frame = +2 Query: 122 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKW 301 V R SG+++ ++ + M+VW KKF T SYLPPLS + KQVD +I Sbjct: 1119 VQRPSGSSSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 1178 Query: 302 VPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMWKLPMFG 412 PCLEF+ + FI ++ + GYYD RYWTMWKLPMFG Sbjct: 1179 SPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFG 1222 Score = 81.3 bits (199), Expect = 8e-16 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Frame = +2 Query: 56 VMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLS 235 V +A +V Q + P S ++ G+ +++ M+VW KKF T S Sbjct: 813 VRLAAFDSVKQVQVISFVVQRPSGSSSSSSWGMAAMTGEKE---MKVWNPVNNKKFETFS 869 Query: 236 YLPPLSTEALLKQVDYLIRSKWVPCLEFS--KVGFIFREH-----NASPGYYDGRYWTMW 394 YLPPLS + KQVD +I PCLEF+ + FI ++ + GYYD RYWTMW Sbjct: 870 YLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMW 929 Query: 395 KLPMFG 412 KLPMFG Sbjct: 930 KLPMFG 935
>RBS3_ACECL (P16131) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 85.5 bits (210), Expect = 4e-17 Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Frame = +2 Query: 128 RLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVP 307 R + N G S + + R M VW K F T SYLPPL+ E + KQVDY++ + W P Sbjct: 24 RATKNNKGFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTP 83 Query: 308 CLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPMFG 412 CLEF+ + R S Y D RYWTMWKLPMFG Sbjct: 84 CLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFG 125
>RBS6_ACECL (Q38692) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) (rbcS4) Length = 182 Score = 85.1 bits (209), Expect = 6e-17 Identities = 55/130 (42%), Positives = 68/130 (52%), Gaps = 7/130 (5%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MA T+MS T ++ Q K A VS G ++ N R M VW K F Sbjct: 1 MAATMMSK--TIISSKQCSKPIAPPKVSINKGFVNTSAAIKN----REMMVWQPFNNKMF 54 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRY 382 T SYLPPL+ E + KQVDY++ + W PCLEF S + E+ + G Y D RY Sbjct: 55 ETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRY 114 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 115 WTMWKLPMFG 124
>RBS7_ACECL (Q38693) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) (rbcS1) Length = 183 Score = 82.4 bits (202), Expect = 4e-16 Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 15/109 (13%) Frame = +2 Query: 131 LSGNAAGLGSVSNGGRI--------RCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYL 286 + G A ++S GG + R M VW K F T SYLPPL+ E + KQVDY+ Sbjct: 17 VKGGVAPKVAMSRGGFLNSGIMKKDRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYI 76 Query: 287 IRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFG 412 + + W PCLEF S + E+ G Y D RYWTMWKLPMFG Sbjct: 77 LANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFG 125
>RBS5_ACEME (P16138) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 183 Score = 82.0 bits (201), Expect = 5e-16 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Frame = +2 Query: 98 LKSTAGLP--VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLSTEALLK 271 L G P V ++ + G S + R M VW K F T S+LPPL+ E + K Sbjct: 12 LNKQCGKPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISK 71 Query: 272 QVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFG 412 QVDY++ + W PCLEF S + E+ G Y D RYWTMWKLPMFG Sbjct: 72 QVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFG 125
>RBS4_ACECL (P16132) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 82.0 bits (201), Expect = 5e-16 Identities = 52/130 (40%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Frame = +2 Query: 44 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 223 MA T+M+ V +G + +P ++S N G + + + R M VW K F Sbjct: 1 MAATMMNKT---VVLSKGCTKPSAVP--KVSINRKGFLNTAMNKK-REMMVWQPFNNKMF 54 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRY 382 T SYLPPL+ E + KQVDY++ + W PCLEF S + E+ G Y D RY Sbjct: 55 ETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRY 114 Query: 383 WTMWKLPMFG 412 WTMWKLPMFG Sbjct: 115 WTMWKLPMFG 124
>RBS2_ACEME (P16135) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 173 Score = 79.7 bits (195), Expect = 2e-15 Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Frame = +2 Query: 182 RCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 355 R M VW K F T S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 32 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 91 Query: 356 SPG-----YYDGRYWTMWKLPMFG 412 G Y D RYWTMWKLPMFG Sbjct: 92 RMGPVASTYQDNRYWTMWKLPMFG 115
>RBS4_ACEME (P16137) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 79.7 bits (195), Expect = 2e-15 Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Frame = +2 Query: 182 RCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 355 R M VW K F T S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100 Query: 356 SPG-----YYDGRYWTMWKLPMFG 412 G Y D RYWTMWKLPMFG Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFG 124
>RBS1_ACEME (P16134) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 79.7 bits (195), Expect = 2e-15 Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Frame = +2 Query: 182 RCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 355 R M VW K F T S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 100 Query: 356 SPG-----YYDGRYWTMWKLPMFG 412 G Y D RYWTMWKLPMFG Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFG 124
>RBS3_ACEME (P16136) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 182 Score = 79.3 bits (194), Expect = 3e-15 Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Frame = +2 Query: 182 RCMQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 355 R M VW K F T S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 41 RGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCI 100 Query: 356 SPG-----YYDGRYWTMWKLPMFG 412 G Y D RYWTMWKLPMFG Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFG 124
>RBS1_ACECL (P16129) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) (Fragment) Length = 126 Score = 71.6 bits (174), Expect = 7e-13 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 7/67 (10%) Frame = +2 Query: 233 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTM 391 SYLPPL+ E + KQVDY++ + W PCLEF+ + R + Y D RYWTM Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTM 61 Query: 392 WKLPMFG 412 WKLPMFG Sbjct: 62 WKLPMFG 68
>RBS_SINAL (P13951) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 82 Score = 62.8 bits (151), Expect = 3e-10 Identities = 22/28 (78%), Positives = 27/28 (96%) Frame = +2 Query: 329 GFIFREHNASPGYYDGRYWTMWKLPMFG 412 GF++REH ++PGYYDGRYWTMWKLP+FG Sbjct: 5 GFVYREHGSTPGYYDGRYWTMWKLPLFG 32
>RBS_PROHO (P27569) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 57.8 bits (138), Expect = 1e-08 Identities = 25/65 (38%), Positives = 44/65 (67%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +++ TLSYLPPLS + + +Q++Y++R ++P +EF++ + +A+ YWTMW Sbjct: 8 RRYETLSYLPPLSDQQIARQIEYMVREGYIPAVEFNE------DSDATT-----CYWTMW 56 Query: 395 KLPMF 409 KLP+F Sbjct: 57 KLPLF 61
>RBS_ALVHS (P24682) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 121 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/66 (42%), Positives = 35/66 (53%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +KF T SYLP L E + KQV+Y++ W P + EH +D YW MW Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAV----------EHTEPENAFD-HYWYMW 65 Query: 395 KLPMFG 412 KLPMFG Sbjct: 66 KLPMFG 71
>RBS_ANASP (P06514) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 56.6 bits (135), Expect = 2e-08 Identities = 30/75 (40%), Positives = 45/75 (60%) Frame = +2 Query: 188 MQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 367 MQ P E +++ TLSYLPPL+ + KQV Y++ ++P +EF++V + P Sbjct: 1 MQTLPKE--RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEV--------SEP-- 48 Query: 368 YDGRYWTMWKLPMFG 412 YWT+WKLP+FG Sbjct: 49 -TELYWTLWKLPLFG 62
>RBS_SYNY3 (P54206) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 55.5 bits (132), Expect = 5e-08 Identities = 26/66 (39%), Positives = 41/66 (62%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +++ TLSYLPPL+ + + KQV++L+ ++P +EF E + P + +WTMW Sbjct: 8 RRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEF--------EEDPQP---ETHFWTMW 56 Query: 395 KLPMFG 412 KLP FG Sbjct: 57 KLPFFG 62
>RBS_PSEHY (Q51857) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 124 Score = 55.1 bits (131), Expect = 6e-08 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 K+F T SYLP +S E + KQ++Y++ W P +E + P YW MW Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE-----------HCEPENAILHYWYMW 72 Query: 395 KLPMFG 412 KLPMFG Sbjct: 73 KLPMFG 78
>RBS_THIDA (Q56260) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 55.1 bits (131), Expect = 6e-08 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +KF T SYLP ++ + KQV+YL+ W P +E + P + YW MW Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE-----------HTEPEHLMDSYWYMW 65 Query: 395 KLPMFG 412 KLPMFG Sbjct: 66 KLPMFG 71
>RBS2_THIFE (Q07088) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 118 Score = 55.1 bits (131), Expect = 6e-08 Identities = 27/65 (41%), Positives = 35/65 (53%) Frame = +2 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 397 KF TLSYLP L+ + + +QV Y++ W P +E + P G YW MWK Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE-----------HTEPENAFGNYWYMWK 66 Query: 398 LPMFG 412 LPMFG Sbjct: 67 LPMFG 71
>RBS1_CHRVI (P22850) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 54.7 bits (130), Expect = 8e-08 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +KF T SYLP + + + KQV+Y++ W P + EH +D YW MW Sbjct: 16 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAI----------EHTEPENAFD-HYWYMW 64 Query: 395 KLPMFG 412 KLPMFG Sbjct: 65 KLPMFG 70
>RBS_RHOCA (O32741) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 54.7 bits (130), Expect = 8e-08 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +K GT SYLPP+ + +QV++++++ W P +E + P + YW MW Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE-----------HTEPDFAAQIYWYMW 65 Query: 395 KLPMFG 412 KLPMFG Sbjct: 66 KLPMFG 71
>RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 53.9 bits (128), Expect = 1e-07 Identities = 26/65 (40%), Positives = 38/65 (58%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 ++F T SYLPPLS + Q++Y+I + P +EF+ EH+ + YWTMW Sbjct: 9 RRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFN-------EHSNPEEF----YWTMW 57 Query: 395 KLPMF 409 KLP+F Sbjct: 58 KLPLF 62
>RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 111 Score = 53.9 bits (128), Expect = 1e-07 Identities = 25/65 (38%), Positives = 41/65 (63%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 K++ TLSYLPPLS + + +QV Y++ ++P +EF K + +P + +WT+W Sbjct: 8 KRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEK--------DPTPELH---HWTLW 56 Query: 395 KLPMF 409 KLP+F Sbjct: 57 KLPLF 61
>RBS1_HYDMR (Q59459) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 52.0 bits (123), Expect = 5e-07 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +K T SYLP ++T+ + QV+Y+I W P +E S+ P YW MW Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIEHSE-----------PENAFSYYWYMW 65 Query: 395 KLPMFG 412 KLPMFG Sbjct: 66 KLPMFG 71
>RBS_CYAPA (P18062) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 106 Score = 52.0 bits (123), Expect = 5e-07 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +2 Query: 215 KKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 394 +KF T SYLPPL+ + + +Q+ Y + + + P +EFS G + WT+W Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFS-----------FTGKAEDLVWTLW 55 Query: 395 KLPMFG 412 KLP+FG Sbjct: 56 KLPLFG 61
>RBS_NITVU (Q59614) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 108 Score = 50.8 bits (120), Expect = 1e-06 Identities = 26/75 (34%), Positives = 39/75 (52%) Frame = +2 Query: 188 MQVWPIEGIKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 367 M V +KK+ T SYLP ++ E + +Q+ + I W P +E ++ G +P Sbjct: 1 MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKG--------TPA- 51 Query: 368 YDGRYWTMWKLPMFG 412 YW MWKLP+FG Sbjct: 52 -KASYWYMWKLPLFG 65
>RBS1_THIFE (P28896) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 110 Score = 50.1 bits (118), Expect = 2e-06 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +2 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 397 K+ T SYLP + E + +Q+ YLI W P +E + P YW MWK Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE-----------HVEPERASTYYWYMWK 60 Query: 398 LPMFG 412 LPMFG Sbjct: 61 LPMFG 65
>RBS2_CHRVI (P22860) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 113 Score = 49.3 bits (116), Expect = 3e-06 Identities = 26/67 (38%), Positives = 36/67 (53%) Frame = +2 Query: 212 IKKFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 391 I ++ T SYLPPL+ E +L+Q+ Y++ + W LE EH Y YW M Sbjct: 13 IGRYETFSYLPPLNREEILEQILYILDNGWNASLE--------HEHPDRAFEY---YWPM 61 Query: 392 WKLPMFG 412 WK+P FG Sbjct: 62 WKMPFFG 68
>RBS_THINE (P45686) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 48.9 bits (115), Expect = 5e-06 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = +2 Query: 218 KFGTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 397 K+ T SYLPP++ E + Q+ Y I W P +E +V N+ +YW MWK Sbjct: 12 KYETFSYLPPMNAERIRAQIKYAIAQGWSPGIEHVEV------KNSM-----NQYWYMWK 60 Query: 398 LPMFG 412 LP FG Sbjct: 61 LPFFG 65
>RBS2_HYDMR (Q59461) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 122 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +2 Query: 227 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 406 T S+LP + + + Q+ Y+I W P LE + +P YW MWKLPM Sbjct: 16 TFSFLPEFTADEIYDQIVYIINQGWTPALE-----------HEAPEAASSHYWGMWKLPM 64 Query: 407 FG 412 FG Sbjct: 65 FG 66
>RBS_SYNPX (P0A4S5) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 227 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 406 T +LPP++ + + Q+ Y+I W P +E + P YW+ WKLP Sbjct: 18 TFGFLPPMTQDEIYDQIAYIIAQGWSPLVE-----------HVHPSNSMATYWSYWKLPF 66 Query: 407 FG 412 FG Sbjct: 67 FG 68
>RBS_SYNPW (P0A4S6) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 227 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 406 T +LPP++ + + Q+ Y+I W P +E + P YW+ WKLP Sbjct: 18 TFGFLPPMTQDEIYDQIAYIIAQGWSPLVE-----------HVHPSNSMATYWSYWKLPF 66 Query: 407 FG 412 FG Sbjct: 67 FG 68
>RBS_CYAME (O22024) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT YLP L+ E + KQ+ Y I W +E++ + YW MW LP Sbjct: 6 GTFCYLPDLTDEQIRKQIQYAINQGWAVSVEYT-----------DDPHPRNSYWEMWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_CYACA (P37394) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ + + KQ+ Y I W +E++ + YW MW LP Sbjct: 6 GTFSFLPDLTNDQIRKQIQYAINKGWALSVEYT-----------DDPHPRNSYWEMWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_ANTSP (P25458) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ E + KQ+ Y + W +EF+ + YW +W LP Sbjct: 6 GTFSFLPDLTDEQIKKQIAYAVSQNWAINIEFT-----------DDPHPRNNYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_GUITH (P14960) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ E ++KQ+ Y I W +E++ + YW +W LP Sbjct: 6 GAFSFLPDLTDEQIVKQIQYAISKNWALNVEWT-----------DDPHPRNAYWDLWGLP 54 Query: 404 MFG 412 +FG Sbjct: 55 LFG 57
>RBS_GALSU (P23756) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ E + KQ+DY+I K +E++ ++ P +W MW LP Sbjct: 6 GTFSFLPDLTDEQIKKQIDYMISKKLAIGIEYT--------NDIHP---RNSFWEMWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_BRAJA (Q9ZI33) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 134 Score = 39.7 bits (91), Expect = 0.003 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ + + KQV Y + W +EF+ + YW MW LP Sbjct: 6 GCFSFLPDLTDDQIYKQVQYCLAKGWAVNIEFT-----------DDPHPRNTYWEMWGLP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBS1_RHOSH (P27998) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 129 Score = 39.7 bits (91), Expect = 0.003 Identities = 22/62 (35%), Positives = 28/62 (45%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ E + QVDY + W L EH P + YW MW +P Sbjct: 6 GCFSFLPDLTDEQISAQVDYCLGRGWAVSL----------EHTDDP-HPRNTYWEMWGMP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBS2_ACECL (P16130) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 86 Score = 39.3 bits (90), Expect = 0.004 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = +2 Query: 356 SPGYYDGRYWTMWKLPMFG 412 S Y D RYWTMWKLPMFG Sbjct: 10 SSTYQDNRYWTMWKLPMFG 28
>RBSC_RALEU (P09658) Ribulose bisphosphate carboxylase small chain, chromosomal| (EC 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 38.9 bits (89), Expect = 0.005 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ E + KQ++Y + W LE++ + YW M+ LP Sbjct: 6 GTFSFLPELTDEQITKQLEYCLNQGWAVGLEYT-----------DDPHPRNTYWEMFGLP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBS_PORAE (Q09125) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 38.9 bits (89), Expect = 0.005 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ + KQV Y + KW +E++ + +W +W LP Sbjct: 6 GTFSFLPDLTDAQIQKQVQYAVSKKWAVSVEYT-----------DDPHPRNSFWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_OLILU (P14961) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 37.7 bits (86), Expect = 0.011 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G SYLP L+ ++KQ+DY + W +E++ + YW +W LP Sbjct: 6 GAFSYLPDLTDAQIIKQIDYCLSRGWSVGVEWT-----------DDPHPRNAYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_XANFL (P23012) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 133 Score = 37.4 bits (85), Expect = 0.014 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ + Q+ Y + W +E++ + YW MW LP Sbjct: 6 GTFSFLPDLTAAQVKAQIQYALDQNWAVSVEYT-----------DDPHPRNTYWEMWGLP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBS_PLECA (Q08052) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 37.4 bits (85), Expect = 0.014 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ + KQ+ Y + W +E++ + YW MW LP Sbjct: 6 GAFSFLPDLTDAQVTKQIQYALNKSWAISIEYT-----------DDPHPRNSYWEMWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_CYLSN (P24683) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 37.0 bits (84), Expect = 0.018 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ E + KQV+Y I W +E++ + YW +W LP Sbjct: 6 GCFSFLPDLTDEQIEKQVNYAISKGWAMNVEWT-----------DDPHPRNNYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_PORPU (P51227) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 34.7 bits (78), Expect = 0.089 Identities = 16/62 (25%), Positives = 29/62 (46%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ + + KQ+ Y++ W +E++ + YW +W LP Sbjct: 6 GAFSFLPDLTDQQINKQLAYIVSKGWSANVEYT-----------DDPHPRNAYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_ECTSI (P24395) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 34.7 bits (78), Expect = 0.089 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP LS + + +QV Y + W +E++ + YW +W LP Sbjct: 6 GCFSFLPDLSDDQIKQQVSYAMSKGWAVSVEWT-----------DDPHPRNSYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS_PYLLI (P23652) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 34.3 bits (77), Expect = 0.12 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP LS E + QV Y + W +E++ + YW +W LP Sbjct: 6 GCFSFLPDLSDEQIKLQVGYAMSKGWAVSVEWT-----------DDPHPRNSYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS2_RHIME (P56890) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 129 Score = 33.9 bits (76), Expect = 0.15 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ E + QV+Y + W +E++ + YW MW P Sbjct: 6 GCFSFLPDLTDEQITAQVEYCLGRGWAIGVEYT-----------DDPHPRNTYWEMWGNP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBSP_RALEU (Q59102) Ribulose bisphosphate carboxylase small chain, plasmid (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 33.9 bits (76), Expect = 0.15 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 GT S+LP L+ + Q++Y + W +E++ + YW M+ LP Sbjct: 6 GTFSFLPDLTDAQITSQLEYCLNQGWAVGIEYT-----------DDPHPRNTYWEMFGLP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBS_ODOSI (P49521) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 33.5 bits (75), Expect = 0.20 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ + + KQ+ Y I W +E++ + YW +W LP Sbjct: 6 GCFSFLPDLTDQQIEKQIAYCIDKGWAMNVEWT-----------DDPHPRNSYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>RBS1_RHIME (P58349) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 129 Score = 33.5 bits (75), Expect = 0.20 Identities = 18/62 (29%), Positives = 26/62 (41%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ E + QV Y + W +E++ + YW MW P Sbjct: 6 GCFSFLPDLTDEQITAQVQYCLGKGWAIGVEYT-----------DDPHPRNTYWEMWGNP 54 Query: 404 MF 409 MF Sbjct: 55 MF 56
>RBS_THANO (O98948) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 32.7 bits (73), Expect = 0.34 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +2 Query: 224 GTLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 403 G S+LP L+ + KQV Y + W +E++ + YW +W LP Sbjct: 6 GCFSFLPDLTDTQIEKQVAYAMNKGWAMNVEWT-----------DDPHPRNNYWELWGLP 54 Query: 404 MF 409 +F Sbjct: 55 LF 56
>SYH_BIFLO (Q8G864) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 466 Score = 31.6 bits (70), Expect = 0.76 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -3 Query: 361 WRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGERWQVRQSPELLD 212 +RG+ LT+ E L E++ +GAD+V LL E Q R EL + Sbjct: 183 YRGLGLTDVEGVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAE 232
>YEL8_YEAST (P39943) Hypothetical 43.1 kDa protein in GAL83-YPT8 intergenic| region Length = 394 Score = 30.4 bits (67), Expect = 1.7 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Frame = +2 Query: 35 LSTMAPTVMSSAATAVAPFQGLKS-----TAGLPVSRLSGNAAGLGSVSNGGRIRCMQVW 199 LST + T ++S + +PFQ LKS A P SG++ LG +S+ I Sbjct: 165 LSTTSITSIASVYPSTSPFQYLKSGFPEDPASTPYVHSSGSSLALGELSSNSSIFSKSRR 224 Query: 200 PIEGIKKFGTLSYLPPLSTEALLKQVDYLIRS 295 + + +LS S+ +LL Q + +S Sbjct: 225 NLAAMSGPDSLSSSKNQSSASLLSQTSHPSKS 256
>NFIP1_XENLA (Q6GLN5) NEDD4 family-interacting protein 1| Length = 212 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 296 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 KW+ + FS PGY+DG+YW W + G Sbjct: 150 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 179
>NFIP1_RAT (Q5U2S1) NEDD4 family-interacting protein 1| Length = 221 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 296 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_MOUSE (Q8R0W6) NEDD4 family-interacting protein 1 (NEDD4 WW| domain-binding protein 5) Length = 221 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 296 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_HUMAN (Q9BT67) NEDD4 family-interacting protein 1 (NEDD4 WW| domain-binding protein 5) (Putative MAPK-activating protein PM13) (Putative NF-kappa-B-activating protein 164) (Putative NFKB and MAPK-activating protein) (Breast cancer-associated protein Length = 221 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 296 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_XENTR (Q4V786) NEDD4 family-interacting protein 1| Length = 211 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 296 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 KW+ + FS PGY+DG+YW W + G Sbjct: 149 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 178
>NFIP1_BRARE (Q6DGP4) NEDD4 family-interacting protein 1| Length = 210 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 296 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 412 KW+ + FS PGY+DG+YW W + G Sbjct: 148 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 177
>PK1L1_MOUSE (Q8R526) Polycystic kidney disease 1-like 1 protein| (Polycystin-1L1) (Fragment) Length = 531 Score = 30.0 bits (66), Expect = 2.2 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 239 LPPLSTEALLKQVDYLI-RSKWVPCLEFSKVGFIFREHNASPGY 367 LP + + LL L+ +S++V C E GFIF E + PGY Sbjct: 26 LPGIFSAFLLVLYGILVSKSRYVDCHEKKNPGFIFLEEDTLPGY 69
>NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC 3.4.24.21)| (Nematode astacin 35) (Dumpy protein 31) (Tollish protein 2) Length = 592 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 Query: 349 VLTEDESNLAELETRHPLGADQVVDLLQECLR 254 ++ D A RHPLG +Q+V L EC+R Sbjct: 185 IVFTDVDGCASNVGRHPLGEEQLVSLAPECIR 216
>TOP2B_CHICK (O42131) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1627 Score = 29.3 bits (64), Expect = 3.7 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +2 Query: 131 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLS-TEALLKQVDYLIRSKWVP 307 L+G+ G+ + NG ++ P+ G + + L L T LK + ++ +W Sbjct: 272 LAGSCKGVKVMLNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDV 325 Query: 308 CLEFSKVGF 334 CL S+ GF Sbjct: 326 CLTLSEKGF 334
>TOP2B_HUMAN (Q02880) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1626 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 131 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLS-TEALLKQVDYLIRSKWVP 307 L+G+ G+ + NG ++ P+ G + + L L T LK + L +W Sbjct: 267 LAGSCRGVKVMFNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDV 320 Query: 308 CLEFSKVGF 334 CL S+ GF Sbjct: 321 CLTLSEKGF 329
>TOP2B_MOUSE (Q64511) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1612 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 131 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLS-TEALLKQVDYLIRSKWVP 307 L+G+ G+ + NG ++ P+ G + + L L T LK + L +W Sbjct: 255 LAGSCKGVKVMFNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDV 308 Query: 308 CLEFSKVGF 334 CL S+ GF Sbjct: 309 CLTLSEKGF 317
>TOP2B_CRILO (Q64399) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1612 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 131 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSYLPPLS-TEALLKQVDYLIRSKWVP 307 L+G+ G+ + NG ++ P+ G + + L L T LK + L +W Sbjct: 255 LAGSCKGVKVMFNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDV 308 Query: 308 CLEFSKVGF 334 CL S+ GF Sbjct: 309 CLTLSEKGF 317
>PRU_MYXXA (P27755) Protein U precursor| Length = 179 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +2 Query: 38 STMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIE--- 208 + +A +++ A +P + +TA L V+ G A +GS + GG + P+ Sbjct: 6 TAVAAVTAAASLVAFSPAEAATATANLNVTANVGGACSIGSGAGGGTLNFGTYDPVVVNS 65 Query: 209 --GIKKFGT 229 G+ FGT Sbjct: 66 ALGVDLFGT 74
>FMT_LISIN (Q92AI5) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 312 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -3 Query: 370 VIPWRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGERWQVRQSPE 221 +I R I +TE+++ + LGA+ ++D L + L G+ V Q PE Sbjct: 147 MISQRKIPITEEDNTGTMFDKLSKLGAELLMDTLPDFLAGKITAVAQDPE 196
>YJIB_BACSU (O34374) Putative cytochrome P450 yjiB (EC 1.14.-.-)| Length = 396 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +2 Query: 95 GLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFGTLSY 238 G+ G P++RL N A +S + C+ + PIE +G S+ Sbjct: 345 GIHFCLGAPLARLEANIALTSLISAFPHMECVSITPIENSVIYGLKSF 392
>HESA_PLEBO (P46037) Protein hesA| Length = 277 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -3 Query: 394 PHCPVSAIVIPWRGIVLTEDESNLAELE 311 PHCPV PWR V ES L +L+ Sbjct: 239 PHCPVCGNHAPWRQHVSRSLESQLRDLD 266
>MNTR_ECOLI (P0A9F1) Transcriptional regulator mntR (Manganese transport| regulator) Length = 155 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 370 VIPWRGIVLTEDESNLA-ELETRHPLGAD--QVVDLLQECLR--GERWQVRQSPELLDAF 206 +IPWRG+ LT + LA E RH + + V+ + E R E + S E LDAF Sbjct: 86 MIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAF 145
>MNTR_ECOL6 (P0A9F2) Transcriptional regulator mntR (Manganese transport| regulator) Length = 155 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 370 VIPWRGIVLTEDESNLA-ELETRHPLGAD--QVVDLLQECLR--GERWQVRQSPELLDAF 206 +IPWRG+ LT + LA E RH + + V+ + E R E + S E LDAF Sbjct: 86 MIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAF 145
>MNTR_ECO57 (Q8X7U4) Transcriptional regulator mntR (Manganese transport| regulator) Length = 155 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 370 VIPWRGIVLTEDESNLA-ELETRHPLGAD--QVVDLLQECLR--GERWQVRQSPELLDAF 206 +IPWRG+ LT + LA E RH + + V+ + E R E + S E LDAF Sbjct: 86 MIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAF 145
>COE2_MOUSE (O08792) Transcription factor COE2 (Early B-cell factor 2) (EBF-2)| (Olf-1/EBF-like 3) (OE-3) (O/E-3) (Metencephalon-mesencephalon-olfactory transcription factor 1) (MET-mesencephalon-olfactory transcription factor 1) (MET-mesencephalon-olfacto Length = 575 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Frame = +2 Query: 29 Y*LSTMAPTVMSSAATAVAPFQG------LKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 Y + + +PTV SS+ +++ PF + +A PV R G+ + S NG R M Sbjct: 508 YGIMSSSPTVGSSSTSSILPFSSSVFPAVKQKSAFAPVIRPQGSPSPACSSGNGNGFRAM 567
>CLPB_MEIRU (Q7X2S8) Chaperone clpB| Length = 854 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 289 DQVVDLLQECLRGERWQVRQSPELLDAFNRPDL 191 D+ +DL+ E R + SPE +DA NR L Sbjct: 379 DKAIDLVDEAAARLRMALESSPESIDALNRRKL 411
>COE2_HUMAN (Q9HAK2) Transcription factor COE2 (Early B-cell factor 2) (EBF-2)| (Fragment) Length = 343 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Frame = +2 Query: 29 Y*LSTMAPTVMSSAATAVAPFQG------LKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 190 Y + + +PTV SS+ +++ PF + +A PV R G+ + S NG R M Sbjct: 276 YGIMSSSPTVGSSSTSSILPFSSSVFPAVKQKSAFAPVIRPQGSPSPACSSGNGNGFRAM 335
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Frame = +2 Query: 50 PTVMSSAATAVAPFQGLKSTAGLPVSRLSG-----NAAGLGSVSNGGRIRCMQ 193 P SS + P G S+ G P + + A+G + +NGG + C+Q Sbjct: 270 PATSSSLPSPATPSHGSPSSHGPPATHPTSPTPPSTASGATTAANGGSLNCLQ 322
>MNTR_SALTY (P67710) Transcriptional regulator mntR (Manganese transport| regulator) Length = 157 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 370 VIPWRGIVLTEDESNLA-ELETRHPLGAD--QVVDLLQECLR--GERWQVRQSPELLDAF 206 +IPWRG+ LT + LA E RH + + V+ + E R E + S E LDAF Sbjct: 86 MIPWRGVFLTPEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSQETLDAF 145
>MNTR_SALTI (P67711) Transcriptional regulator mntR (Manganese transport| regulator) Length = 157 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 370 VIPWRGIVLTEDESNLA-ELETRHPLGAD--QVVDLLQECLR--GERWQVRQSPELLDAF 206 +IPWRG+ LT + LA E RH + + V+ + E R E + S E LDAF Sbjct: 86 MIPWRGVFLTPEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSQETLDAF 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,444,071 Number of Sequences: 219361 Number of extensions: 1053648 Number of successful extensions: 3684 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 3368 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3485 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
