ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet99f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329268 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 329209 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329208 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 329149 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329148 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 329089 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329088 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 329029 Query: 241 caag 244 |||| Sbjct: 329028 caag 329025 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 20 ggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgg 79 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| Sbjct: 421226 ggatgatcagccacactgggactgagacacggcccggactcccacggggggcagcagtgg 421167 Query: 80 ggaattttccgcaatgggcgaaagcc 105 ||||| || ||||||||||||||| Sbjct: 421166 ggaatcttggacaatgggcgaaagcc 421141 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 187 gaggaataagcatcggctaactctgtgccagcagccgcggtaagac 232 |||||| |||| |||||||||| |||||||||||||||||||||| Sbjct: 421057 gaggaagaagccccggctaactccgtgccagcagccgcggtaagac 421012
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127324 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 127265 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127264 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 127205 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127204 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 127145 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127144 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 127085 Query: 241 caag 244 |||| Sbjct: 127084 caag 127081 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 95472 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 95532 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95533 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 95592 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 95652 Query: 241 caag 244 |||| Sbjct: 95653 caag 95656
>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 300 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 360 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 420 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 480 Query: 241 caag 244 |||| Sbjct: 481 caag 484
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 276 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 336 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 396 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 456 Query: 241 caag 244 |||| Sbjct: 457 caag 460
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48554 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 48495 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48494 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 48435 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48434 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 48375 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48374 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 48315 Query: 241 caag 244 |||| Sbjct: 48314 caag 48311 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16564 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 16623 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16624 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 16683 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16684 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 16743 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16744 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 16803 Query: 241 caag 244 |||| Sbjct: 16804 caag 16807
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127393 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 127334 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127333 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 127274 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127273 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 127214 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127213 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 127154 Query: 241 caag 244 |||| Sbjct: 127153 caag 127150 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 95503 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 95563 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95564 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 95623 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 95683 Query: 241 caag 244 |||| Sbjct: 95684 caag 95687
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1258 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 1318 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1319 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 1378 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 1438 Query: 241 caag 244 |||| Sbjct: 1439 caag 1442
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1766 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1825 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1826 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 1885 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1886 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 1945 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1946 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 2005 Query: 241 caag 244 |||| Sbjct: 2006 caag 2009
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 483 Query: 241 caag 244 |||| Sbjct: 484 caag 487
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 304 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 364 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 424 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 484 Query: 241 caag 244 |||| Sbjct: 485 caag 488
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 304 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 364 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 424 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 484 Query: 241 caag 244 |||| Sbjct: 485 caag 488
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 304 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 364 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 424 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 484 Query: 241 caag 244 |||| Sbjct: 485 caag 488
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128110 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 128051 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128050 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 127991 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127990 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 127931 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127930 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 127871 Query: 241 caag 244 |||| Sbjct: 127870 caag 127867 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96121 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 96180 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96181 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 96240 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96241 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 96300 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96301 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 96360 Query: 241 caag 244 |||| Sbjct: 96361 caag 96364
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123590 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 123531 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123530 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 123471 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123470 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 123411 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123410 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 123351 Query: 241 caag 244 |||| Sbjct: 123350 caag 123347 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91304 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91363 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91364 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91423 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91424 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 91483 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91484 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91543 Query: 241 caag 244 |||| Sbjct: 91544 caag 91547
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89311 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 89252 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89251 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 89192 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 89191 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 89132 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89131 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 89072 Query: 241 caag 244 |||| Sbjct: 89071 caag 89068
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123597 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 123538 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 123478 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 123418 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123417 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 123358 Query: 241 caag 244 |||| Sbjct: 123357 caag 123354 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91559 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91618 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91619 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91678 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 91679 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 91738 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91739 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91798 Query: 241 caag 244 |||| Sbjct: 91799 caag 91802
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123597 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 123538 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 123478 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 123418 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123417 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 123358 Query: 241 caag 244 |||| Sbjct: 123357 caag 123354 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91559 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91618 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91619 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91678 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 91679 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 91738 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91739 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91798 Query: 241 caag 244 |||| Sbjct: 91799 caag 91802
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123546 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 123487 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123486 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 123427 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123426 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 123367 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123366 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 123307 Query: 241 caag 244 |||| Sbjct: 123306 caag 123303 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91504 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91563 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91564 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91623 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 91624 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 91683 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91684 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91743 Query: 241 caag 244 |||| Sbjct: 91744 caag 91747
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123567 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 123508 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123507 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 123448 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123447 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 123388 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123387 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 123328 Query: 241 caag 244 |||| Sbjct: 123327 caag 123324 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91551 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91610 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91611 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91670 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 91671 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 91730 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91731 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91790 Query: 241 caag 244 |||| Sbjct: 91791 caag 91794
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118604 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 118663 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118664 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 118723 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118724 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 118783 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118784 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 118843 Query: 241 caag 244 |||| Sbjct: 118844 caag 118847 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86729 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 86788 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86789 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 86848 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86849 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 86908 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86909 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 86968 Query: 241 caag 244 |||| Sbjct: 86969 caag 86972 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59194 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 59135 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59134 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 59075 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 59074 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 59015 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59014 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 58955 Query: 241 caag 244 |||| Sbjct: 58954 caag 58951 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10326 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 10385 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10386 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 10445 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10446 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 10505 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10506 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 10565 Query: 241 caag 244 |||| Sbjct: 10566 caag 10569
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137134 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 137193 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137194 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 137253 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 137254 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 137313 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137314 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 137373 Query: 241 caag 244 |||| Sbjct: 137374 caag 137377
>dbj|AB254251.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: 3m Length = 617 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 201 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 261 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 321 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 381 Query: 241 caag 244 |||| Sbjct: 382 caag 385
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264484 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9264543 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264544 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9264603 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264604 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9264663 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264664 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9264723 Query: 241 caag 244 |||| Sbjct: 9264724 caag 9264727 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9223984 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9224043 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224044 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9224103 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224104 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9224163 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224164 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9224223 Query: 241 caag 244 |||| Sbjct: 9224224 caag 9224227 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205656 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9205715 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205716 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9205775 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205776 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9205835 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205836 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9205895 Query: 241 caag 244 |||| Sbjct: 9205896 caag 9205899 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160578 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9160637 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160638 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9160697 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160698 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9160757 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160758 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9160817 Query: 241 caag 244 |||| Sbjct: 9160818 caag 9160821 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128703 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9128762 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128763 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9128822 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128823 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9128882 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128883 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9128942 Query: 241 caag 244 |||| Sbjct: 9128943 caag 9128946 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9101168 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9101109 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9101108 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9101049 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9101048 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9100989 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9100988 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9100929 Query: 241 caag 244 |||| Sbjct: 9100928 caag 9100925 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052400 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9052459 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052460 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9052519 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052520 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9052579 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052580 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9052639 Query: 241 caag 244 |||| Sbjct: 9052640 caag 9052643 Score = 127 bits (64), Expect = 3e-26 Identities = 102/114 (89%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 268 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 324 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 24891465 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 24891524 Query: 325 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 378 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 24891525 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggagg 24891578 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 20 ggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgg 79 ||||||||||||||||||||||||||||||||||| |||||| ||||| || |||||||| Sbjct: 32961806 ggatgatcagccacactgggactgagacacggcccggactcccacggggggtagcagtgg 32961747 Query: 80 ggaattttccgcaatgggcgaaagcc 105 ||||| || ||||||||||||||| Sbjct: 32961746 ggaatcttggacaatgggcgaaagcc 32961721 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 187 gaggaataagcatcggctaactctgtgccagcagccgcggtaagac 232 |||||| |||| |||||||||| |||||||||||||||||||||| Sbjct: 32961637 gaggaagaagccccggctaactccgtgccagcagccgcggtaagac 32961592 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 aagcatcggctaactctgtgcc 215 |||||||||||||||||||||| Sbjct: 18465935 aagcatcggctaactctgtgcc 18465956 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 tacgggaggcagcagtggggaattt 86 |||||| |||||||||||||||||| Sbjct: 15066850 tacgggtggcagcagtggggaattt 15066874 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 tacgggaggcagcagtggggaattt 86 |||||| |||||||||||||||||| Sbjct: 14320099 tacgggtggcagcagtggggaattt 14320075
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934471 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 19934530 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934531 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 19934590 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934591 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 19934650 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934651 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 19934710 Query: 241 caag 244 |||| Sbjct: 19934711 caag 19934714 Score = 460 bits (232), Expect = e-126 Identities = 241/244 (98%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280952 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 10280893 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280892 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 10280833 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 10280832 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgatg 10280773 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280772 gtatctgatgaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 10280713 Query: 241 caag 244 |||| Sbjct: 10280712 caag 10280709 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10383350 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 10383409 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10383410 ctacgggaggcagcagtggggaattttccacaatgggcgaaagcctgacggagcaatgcc 10383469 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10383470 acgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 10383529 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10383530 gtatctgaggaataagcatcggctaactctgtgctagcagccgcggtaagacagaggatg 10383589 Query: 241 caag 244 |||| Sbjct: 10383590 caag 10383593 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 204 taactctgtgccagcagccgcggtaagac 232 |||||| |||||||||||||||||||||| Sbjct: 4266731 taactccgtgccagcagccgcggtaagac 4266703
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180213 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 14180154 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180153 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 14180094 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180093 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 14180034 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180033 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 14179974 Query: 241 caag 244 |||| Sbjct: 14179973 caag 14179970 Score = 246 bits (124), Expect = 4e-62 Identities = 130/132 (98%) Strand = Plus / Plus Query: 4 agtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactccta 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21822825 agtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactccta 21822884 Query: 64 cgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccgcg 123 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 21822885 cgggagacagcagtggggaattttccgcaatgggcgaaagcctgacagagcaatgccgcg 21822944 Query: 124 tggaggtggaag 135 |||||||||||| Sbjct: 21822945 tggaggtggaag 21822956 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 20 ggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgg 79 ||||||||||||||||| ||||| |||||| |||| ||||| ||||| ||||||||||| Sbjct: 13449294 ggatgatcagccacactaggacttagacactgcccgaactcccacggggggcagcagtgg 13449235 Query: 80 ggaattttccgcaatgggcgaaagcc 105 ||||| || ||||||||||||||| Sbjct: 13449234 ggaatcttggacaatgggcgaaagcc 13449209
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884887 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 884828 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884827 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 884768 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 884767 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 884708 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884707 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 884648 Query: 241 caag 244 |||| Sbjct: 884647 caag 884644 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12829674 atcagtagctggtccgagaagatgatcagccacactgggactgagacacggcccagactc 12829615 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12829614 ctacgggaggcagcagtggggaattttccacaatgggcgaaagcctgacggagcaatgtt 12829555 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12829554 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 12829495 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12829494 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 12829435 Query: 241 caag 244 |||| Sbjct: 12829434 caag 12829431 Score = 135 bits (68), Expect = 1e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 38 ggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaatggg 97 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19262125 ggactgagacacggcccagactcctacgggaggcagcagtggagaattttccgcaatggg 19262184 Query: 98 cgaaagcctgac 109 |||||||||||| Sbjct: 19262185 cgaaagcctgac 19262196 Score = 123 bits (62), Expect = 4e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 17 agaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcag 76 |||||| ||||||| |||||| |||||| ||||| ||||||||||||||||| | ||||| Sbjct: 4749699 agaggacgatcagctacactgagactgaaacacgacccagactcctacgggaagtagcag 4749758 Query: 77 tggggaattttccgcaatgggcgaaagcctgacggagcaatgccgc 122 |||| |||||||||||||| | |||||||||| ||||||||||||| Sbjct: 4749759 tgggaaattttccgcaatgagagaaagcctgatggagcaatgccgc 4749804
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357131 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 14357190 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357191 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 14357250 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357251 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 14357310 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357311 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 14357370 Query: 241 caag 244 |||| Sbjct: 14357371 caag 14357374 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345744 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 14345803 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345804 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 14345863 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345864 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 14345923 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345924 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 14345983 Query: 241 caag 244 |||| Sbjct: 14345984 caag 14345987 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 811975 atcagtagctggtccgagaggatgatcagccacactgggactgagacatggcccagactc 811916 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| Sbjct: 811915 ctacgggaggcagcaatgtggaattttccgcaatgggagaaagcctgacggagcaatgct 811856 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811855 gtgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 811796 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 811795 gtatctgaggaataagcatcggctaactctatgccagcagccgtggtaagacagaggatg 811736 Query: 241 caag 244 |||| Sbjct: 811735 caag 811732 Score = 99.6 bits (50), Expect = 6e-18 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 278 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 331 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 24065827 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24065886 Query: 332 gaagctcccctcggctacagcattga 357 |||||||||||||||||||||||||| Sbjct: 24065887 gaagctcccctcggctacagcattga 24065912 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 212 tgccagcagccgcggtaagacagaggatgcaag 244 ||||||||||| |||||| |||||||||||||| Sbjct: 30831538 tgccagcagccacggtaaaacagaggatgcaag 30831570 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 182 tatctgaggaataagcatcggctaactctgtgcca 216 ||||||||||||||||||| ||||| | ||||||| Sbjct: 10965725 tatctgaggaataagcatcagctaattttgtgcca 10965691
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51572 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 51513 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51512 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 51453 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51452 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 51393 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51392 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 51333 Query: 241 caag 244 |||| Sbjct: 51332 caag 51329
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1021 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 961 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 901 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 841 Query: 241 caag 244 |||| Sbjct: 840 caag 837
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65094 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 65035 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65034 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 64975 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 64974 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 64915 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64914 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 64855 Query: 241 caag 244 |||| Sbjct: 64854 caag 64851
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79053 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 79112 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79113 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 79172 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 79173 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 79232 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79233 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 79292 Query: 241 caag 244 |||| Sbjct: 79293 caag 79296 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67666 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 67725 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67726 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 67785 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 67786 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 67845 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67846 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 67905 Query: 241 caag 244 |||| Sbjct: 67906 caag 67909
>dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B03, full insert sequence Length = 1569 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 257 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 317 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 377 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 437 Query: 241 caag 244 |||| Sbjct: 438 caag 441
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945747 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 19945806 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945807 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 19945866 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945867 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 19945926 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945927 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 19945986 Query: 241 caag 244 |||| Sbjct: 19945987 caag 19945990 Score = 460 bits (232), Expect = e-126 Identities = 241/244 (98%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286991 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 10286932 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286931 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 10286872 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 10286871 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgatg 10286812 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286811 gtatctgatgaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 10286752 Query: 241 caag 244 |||| Sbjct: 10286751 caag 10286748 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389389 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 10389448 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10389449 ctacgggaggcagcagtggggaattttccacaatgggcgaaagcctgacggagcaatgcc 10389508 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389509 acgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 10389568 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10389569 gtatctgaggaataagcatcggctaactctgtgctagcagccgcggtaagacagaggatg 10389628 Query: 241 caag 244 |||| Sbjct: 10389629 caag 10389632 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 204 taactctgtgccagcagccgcggtaagac 232 |||||| |||||||||||||||||||||| Sbjct: 4267552 taactccgtgccagcagccgcggtaagac 4267524
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123540 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 123481 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123480 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 123421 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123420 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 123361 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123360 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 123301 Query: 241 caag 244 |||| Sbjct: 123300 caag 123297 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91499 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91558 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91559 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91618 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 91619 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 91678 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91679 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91738 Query: 241 caag 244 |||| Sbjct: 91739 caag 91742
>emb|AM159406.1| Uncultured bacterium 16S rRNA gene, clone RB45-47 Length = 972 Score = 472 bits (238), Expect = e-130 Identities = 241/242 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 300 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 360 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 420 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 480 Query: 241 ca 242 || Sbjct: 481 ca 482
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 468 bits (236), Expect = e-129 Identities = 242/244 (99%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 276 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctacgggaggcagcagtgggaatttttccgcaatgggcgaaagcctgacggagcaatgcc 336 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 396 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 456 Query: 241 caag 244 |||| Sbjct: 457 caag 460
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 468 bits (236), Expect = e-129 Identities = 242/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245511 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 9245452 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245451 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 9245392 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245391 acgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 9245332 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245331 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 9245272 Query: 241 caag 244 |||| Sbjct: 9245271 caag 9245268 Score = 103 bits (52), Expect = 4e-19 Identities = 107/124 (86%), Gaps = 6/124 (4%) Strand = Plus / Minus Query: 90 gcaatgggcgaaagcctgacggagcaatgccgcgtggaggtggaaggcctacgggtcgtc 149 |||||||| |||||||||| ||||||||| | ||||||||| ||| || |||||||||| Sbjct: 16547510 gcaatgggtgaaagcctgatggagcaatgtcatgtggaggtgaaagccc-acgggtcgtc 16547452 Query: 150 aacttcttttctcggagaagaa-----acaatgacggtatctgaggaataagcatcggct 204 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||||||||| Sbjct: 16547451 aacttcttttctcagagaagaacaatgacaatgacagtatccgagaaataagcatcggct 16547392 Query: 205 aact 208 |||| Sbjct: 16547391 aact 16547388
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 468 bits (236), Expect = e-129 Identities = 242/244 (99%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56724 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 56665 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56664 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 56605 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 56604 acgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 56545 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56544 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 56485 Query: 241 caag 244 |||| Sbjct: 56484 caag 56481
>gb|DQ098848.1| Uncultured bacterium clone MLLC20 16S ribosomal RNA gene, partial sequence Length = 719 Score = 460 bits (232), Expect = e-126 Identities = 241/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 349 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 350 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaaacaatgacg 409 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 469 Query: 241 caag 244 |||| Sbjct: 470 caag 473
>gb|DQ098847.1| Uncultured bacterium clone MLLC19 16S ribosomal RNA gene, partial sequence Length = 774 Score = 460 bits (232), Expect = e-126 Identities = 241/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 283 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 343 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 344 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaaacaatgacg 403 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 463 Query: 241 caag 244 |||| Sbjct: 464 caag 467
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 460 bits (232), Expect = e-126 Identities = 241/244 (98%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62277 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 62218 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62217 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 62158 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 62157 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgatg 62098 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62097 gtatctgatgaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 62038 Query: 241 caag 244 |||| Sbjct: 62037 caag 62034
>emb|AM159431.1| Uncultured bacterium 16S rRNA gene, clone RB45-25e Length = 984 Score = 454 bits (229), Expect = e-124 Identities = 242/245 (98%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 300 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 360 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttctttt-ctcggagaagaaacaatgac 179 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 361 gcgtggaggtggaaggcccacgggtcgtcaacttcttttcctcggagaagaaacaatgac 420 Query: 180 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggat 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 421 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagaccgaggat 480 Query: 240 gcaag 244 ||||| Sbjct: 481 gcaag 485
>gb|DQ187922.1| Uncultured phototrophic eukaryote clone 90 16S ribosomal RNA gene, partial sequence Length = 927 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 92 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 152 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 153 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaatgacg 212 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 272 Query: 241 caag 244 |||| Sbjct: 273 caag 276
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138628 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 138569 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138568 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138509 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 138508 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaatgacg 138449 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138448 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 138389 Query: 241 caag 244 |||| Sbjct: 138388 caag 138385 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101654 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 101713 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101714 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 101773 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 101774 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaatgacg 101833 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101834 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 101893 Query: 241 caag 244 |||| Sbjct: 101894 caag 101897
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89742 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 89801 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89802 ctacgggaggcagcagtggggaattttccacaatgggcgaaagcctgacggagcaatgcc 89861 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 89862 acgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 89921 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89922 gtatctgaggaataagcatcggctaactctgtgctagcagccgcggtaagacagaggatg 89981 Query: 241 caag 244 |||| Sbjct: 89982 caag 89985
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23806 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 23865 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 23866 ctacgggaggcagcagtggggaattttccacaatgggcgaaagcctgacggagcaatgcc 23925 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23926 acgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 23985 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23986 gtatctgaggaataagcatcggctaactctgtgctagcagccgcggtaagacagaggatg 24045 Query: 241 caag 244 |||| Sbjct: 24046 caag 24049
>emb|AM159495.1| Uncultured bacterium 16S rRNA gene, clone RB90b-49 Length = 1008 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 250 atcagtagctggtccgagaggatgatcagaaacactgggactgagacacggcccagactc 309 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 369 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 429 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 430 gtatctgaggaataagcatcggctaattctgtgccagcagccgcggtaagacagaggatg 489 Query: 241 caag 244 |||| Sbjct: 490 caag 493
>emb|AM159480.1| Uncultured bacterium 16S rRNA gene, clone RB90b-43 Length = 1095 Score = 448 bits (226), Expect = e-123 Identities = 240/244 (98%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 407 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 467 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gcgtgga---ggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 524 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 584 Query: 241 caag 244 |||| Sbjct: 585 caag 588
>emb|AM159428.1| Uncultured bacterium 16S rRNA gene, clone RB45-22e Length = 997 Score = 448 bits (226), Expect = e-123 Identities = 243/246 (98%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 300 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 360 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttctttt-ctcggagaagaaacaatgac 179 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 361 gcgtggaggtggaaggcccacgggtcgtcaacttcttttcctcggagaagaaacaatgac 420 Query: 180 ggtatctgaggaataagcatcggctaac-tctgtgccagcagccgcggtaagacagagga 238 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 421 ggtatctgaggaataagcatcggctaacttctgtgccagcagccgcggtaagacagagga 480 Query: 239 tgcaag 244 |||||| Sbjct: 481 tgcaag 486
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 127133 atcagtagctggtccgagaagatgatcagccacactgggactgagacacggcccagactc 127074 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 127073 ctacgggaggcagcagtggggaattttccacaatgggcgaaagcctgacggagcaatgtt 127014 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127013 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 126954 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126953 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 126894 Query: 241 caag 244 |||| Sbjct: 126893 caag 126890
>gb|AY191350.1| Uncultured marine eukaryote isolate ODP1176A22X_6_B 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 828 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaattttccgcaatgggtgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 346 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcgaagaagaaacaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143120 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 143061 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143060 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 143001 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| | |||||||| |||||||| Sbjct: 143000 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccagagaagaagcaatgacg 142941 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142940 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 142881 Query: 241 caag 244 |||| Sbjct: 142880 caag 142877 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106825 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 106884 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106885 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 106944 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| | |||||||| |||||||| Sbjct: 106945 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccagagaagaagcaatgacg 107004 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107005 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 107064 Query: 241 caag 244 |||| Sbjct: 107065 caag 107068
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131502 atcagtagctggtccgagaagatgatcagccacactgggactgagacacggcccagactc 131443 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131442 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 131383 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 131382 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaatgacg 131323 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131322 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 131263 Query: 241 caag 244 |||| Sbjct: 131262 caag 131259 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103420 atcagtagctggtccgagaagatgatcagccacactgggactgagacacggcccagactc 103479 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103480 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 103539 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 103540 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaatgacg 103599 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103600 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 103659 Query: 241 caag 244 |||| Sbjct: 103660 caag 103663
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1207 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1148 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 1088 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | |||||||||||||||||||||| |||||||| Sbjct: 1087 gcgtggaggtagaaggcccacgggtcatgaacttcttttctcggagaagaagcaatgacg 1028 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1027 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 968 Query: 241 caag 244 |||| Sbjct: 967 caag 964
>emb|AM159498.1| Uncultured bacterium 16S rRNA gene, clone RB90b-72 Length = 997 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 atcagtagctggctcgagaggatgatcagccacactgggactgagacacggcccagactc 298 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 358 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 359 gcgtggaggtggaaggcccacgggtcgtcaacctcttttctcggagaagaaacaatgacg 418 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 419 gtatctgaggaataagcatcggctaactctgtgccagtagccgcggtaagacagaggatg 478 Query: 241 caag 244 |||| Sbjct: 479 caag 482
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137880 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 137821 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137820 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 137761 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 137760 gcgtggaggtagaaggcccacgggtcgtaaacttcttttcccggagaagaagcaatgacg 137701 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137700 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 137641 Query: 241 caag 244 |||| Sbjct: 137640 caag 137637 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100091 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 100150 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100151 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 100210 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 100211 gcgtggaggtagaaggcccacgggtcgtaaacttcttttcccggagaagaagcaatgacg 100270 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100271 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 100330 Query: 241 caag 244 |||| Sbjct: 100331 caag 100334
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131940 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 131881 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131880 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 131821 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 131820 gcgtggaggtagaaggcctacgggtcgtaaactccttttctcggagaagaagcaatgacg 131761 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131760 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 131701 Query: 241 caag 244 |||| Sbjct: 131700 caag 131697 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91507 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 91566 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 91567 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91626 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 91627 gcgtggaggtagaaggcctacgggtcgtaaactccttttctcggagaagaagcaatgacg 91686 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91687 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 91746 Query: 241 caag 244 |||| Sbjct: 91747 caag 91750
>gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 288 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 348 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 349 gcgtggaggtagaaggcctacgggtcgtaaactccttttctcggagaagaagcaatgacg 408 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 468 Query: 241 caag 244 |||| Sbjct: 469 caag 472
>emb|AM159430.1| Uncultured bacterium 16S rRNA gene, clone RB45-24e Length = 991 Score = 438 bits (221), Expect = e-120 Identities = 241/245 (98%), Gaps = 2/245 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 300 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 ctacgggaggcagcagtggggaattttccgcaaggggcgaaagcctgacggagcaatgcc 360 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 420 Query: 181 gtatctgaggaataagcatcggctaac-tctgtgccagcagccgcggtaagacagaggat 239 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 421 gtatctgaggaataagc-tcggctaacttctgtgccagcagccgcggtaagacagaggat 479 Query: 240 gcaag 244 ||||| Sbjct: 480 gcaag 484
>gb|AY827071.1| Uncultured Oscillatoriales cyanobacterium clone X20 16S ribosomal RNA gene, partial sequence Length = 452 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 167 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 227 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 228 gcgtggaggaagaaagcctacgggtcgtaaacttcttttctcggagaagaaacaatgacg 287 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 347 Query: 241 caag 244 |||| Sbjct: 348 caag 351
>gb|AY523534.1| Fragaria x ananassa 16S ribosomal RNA gene, partial sequence; chloroplast Length = 591 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 250 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 310 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 311 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 370 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 371 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 430 Query: 241 caag 244 |||| Sbjct: 431 caag 434
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139426 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139367 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139366 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 139307 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 139306 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 139247 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139246 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139187 Query: 241 caag 244 |||| Sbjct: 139186 caag 139183 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102483 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102542 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102543 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102602 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102603 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102662 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102663 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102722 Query: 241 caag 244 |||| Sbjct: 102723 caag 102726
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 301 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 361 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 362 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 421 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 422 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 481 Query: 241 caag 244 |||| Sbjct: 482 caag 485
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 364 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 424 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 483 Query: 241 caag 244 |||| Sbjct: 484 caag 487
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 302 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 362 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 363 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 422 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 423 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 482 Query: 241 caag 244 |||| Sbjct: 483 caag 486
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145791 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 145732 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145731 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 145672 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 145671 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 145612 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145611 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 145552 Query: 241 caag 244 |||| Sbjct: 145551 caag 145548 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107866 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 107925 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107926 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 107985 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 107986 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 108045 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108046 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 108105 Query: 241 caag 244 |||| Sbjct: 108106 caag 108109
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 276 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 336 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 337 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 396 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 456 Query: 241 caag 244 |||| Sbjct: 457 caag 460
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 297 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 357 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 358 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 417 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 418 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 477 Query: 241 caag 244 |||| Sbjct: 478 caag 481
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42576 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 42635 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42636 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 42695 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 42696 gcgtggaggtcgaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 42755 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42756 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 42815 Query: 241 caag 244 |||| Sbjct: 42816 caag 42819
>gb|U46209.1|AGU46209 Alnus glutinosa 16S rRNA gene, chloroplast gene encoding chloroplast rRNA, partial sequence Length = 996 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 248 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 308 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 309 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 368 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 369 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 428 Query: 241 caag 244 |||| Sbjct: 429 caag 432
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139701 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139642 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139641 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 139582 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 139581 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 139522 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139521 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139462 Query: 241 caag 244 |||| Sbjct: 139461 caag 139458 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102706 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102765 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102766 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102825 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102826 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102885 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102886 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102945 Query: 241 caag 244 |||| Sbjct: 102946 caag 102949
>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact67 Length = 1453 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 284 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct: 345 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatgacg 404 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 464 Query: 241 caag 244 |||| Sbjct: 465 caag 468
>emb|AJ867653.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact62 Length = 1448 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 284 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct: 345 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatgacg 404 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 464 Query: 241 caag 244 |||| Sbjct: 465 caag 468
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 283 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 343 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct: 344 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatgacg 403 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 463 Query: 241 caag 244 |||| Sbjct: 464 caag 467
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 283 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 343 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct: 344 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatgacg 403 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 463 Query: 241 caag 244 |||| Sbjct: 464 caag 467
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact22 Length = 1416 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 398 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 458 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct: 459 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatgacg 518 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 578 Query: 241 caag 244 |||| Sbjct: 579 caag 582
>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact02 Length = 1503 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 333 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 393 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct: 394 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatgacg 453 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 513 Query: 241 caag 244 |||| Sbjct: 514 caag 517
>emb|X95278.1|AGCH16SRR A.glutinosa chloroplast 16S ribosomal RNA Length = 996 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 248 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 308 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 309 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 368 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 369 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 428 Query: 241 caag 244 |||| Sbjct: 429 caag 432
>gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial sequence Length = 1436 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 290 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 350 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 351 gcgtggaggaagaaggcctacgggtcgtaaactccttttctcggagaagaagcaatgacg 410 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 470 Query: 241 caag 244 |||| Sbjct: 471 caag 474
>gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 286 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 346 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 347 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcggagaagaagcaatgacg 406 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 407 gtatctgaggaataagcatcggctaaccctgtgccagcagccgcggtaagacagaggatg 466 Query: 241 caag 244 |||| Sbjct: 467 caag 470
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 349 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 350 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 409 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 410 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 469 Query: 241 caag 244 |||| Sbjct: 470 caag 473
>gb|AY145639.1| Uncultured eukaryote FL10D12 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 699 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 364 gcgtgaaggcagaaggcccacgggtcgtgaacttcttttctcggagaagaagcaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 483 Query: 241 caag 244 |||| Sbjct: 484 caag 487
>gb|AY957763.1| Uncultured bacterium clone P2HE06 16S small subunit ribosomal RNA gene, partial sequence Length = 440 Score = 432 bits (218), Expect = e-118 Identities = 227/230 (98%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 270 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 330 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 331 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaaacaatgacg 390 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaag 230 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaag 440
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 430 bits (217), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 279 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 339 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 340 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 399 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 400 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatn 459 Query: 241 caag 244 |||| Sbjct: 460 caag 463
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 273 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 333 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| | |||||||| |||||||| Sbjct: 334 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccagagaagaagcaatgacg 393 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 453 Query: 241 caag 244 |||| Sbjct: 454 caag 457
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143186 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 143127 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143126 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 143067 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 143066 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 143007 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 143006 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 142947 Query: 241 caag 244 |||| Sbjct: 142946 caag 142943 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105911 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 105970 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105971 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 106030 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 106031 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 106090 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106091 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 106150 Query: 241 caag 244 |||| Sbjct: 106151 caag 106154
>gb|BT014415.1| Lycopersicon esculentum clone 133723R, mRNA sequence Length = 1449 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 433 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 493 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 494 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 553 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 554 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 613 Query: 241 caag 244 |||| Sbjct: 614 caag 617
>gb|AY043965.1| Uncultured embryophyte plastid clone SMW4.10WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 508 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 282 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 342 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 343 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 402 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 462 Query: 241 caag 244 |||| Sbjct: 463 caag 466
>gb|AY043964.1| Uncultured embryophyte plastid clone NOW2.115WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 518 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 274 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 334 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| || |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 335 gcgtggaggtagagggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 394 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 395 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 454 Query: 241 caag 244 |||| Sbjct: 455 caag 458
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1254 atcagtagctggttcgagaggatgatcagccacactgggactgagacacggcccagactc 1195 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 1135 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 1134 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 1075 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1074 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 1015 Query: 241 caag 244 |||| Sbjct: 1014 caag 1011
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139616 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139557 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139556 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 139497 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 139496 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 139437 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139436 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139377 Query: 241 caag 244 |||| Sbjct: 139376 caag 139373 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103014 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 103073 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103074 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 103133 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 103134 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 103193 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103194 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 103253 Query: 241 caag 244 |||| Sbjct: 103254 caag 103257
>emb|AM086239.1| Pinus thunbergii plastid 16S rRNA gene, isolate 20 0D6 Length = 924 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 226 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 286 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 287 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatgacg 346 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 406 Query: 241 caag 244 |||| Sbjct: 407 caag 410
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135159 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 135100 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135099 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 135040 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 135039 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 134980 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134979 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 134920 Query: 241 caag 244 |||| Sbjct: 134919 caag 134916 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99476 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 99535 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99536 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 99595 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 99596 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 99655 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99656 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 99715 Query: 241 caag 244 |||| Sbjct: 99716 caag 99719
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144015 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 143956 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143955 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 143896 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 143895 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 143836 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 143835 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 143776 Query: 241 caag 244 |||| Sbjct: 143775 caag 143772 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106045 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 106104 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106105 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 106164 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 106165 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 106224 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106225 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 106284 Query: 241 caag 244 |||| Sbjct: 106285 caag 106288
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140236 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 140177 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140176 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 140117 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 140116 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 140057 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140056 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139997 Query: 241 caag 244 |||| Sbjct: 139996 caag 139993 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103321 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 103380 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103381 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 103440 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 103441 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 103500 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103501 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 103560 Query: 241 caag 244 |||| Sbjct: 103561 caag 103564
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138978 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 138919 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138918 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138859 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 138858 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 138799 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138798 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 138739 Query: 241 caag 244 |||| Sbjct: 138738 caag 138735 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102058 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102117 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102118 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102177 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102178 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102237 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102238 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102297 Query: 241 caag 244 |||| Sbjct: 102298 caag 102301
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 304 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 364 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||| |||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 365 gcgtggaggtagaaggcttacgggtcgtgaacttcttttcccggagaagaagcaatgacg 424 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 425 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 484 Query: 241 caag 244 |||| Sbjct: 485 caag 488
>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1467 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 288 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 348 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 349 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 408 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 468 Query: 241 caag 244 |||| Sbjct: 469 caag 472
>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 349 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 350 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 409 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 469 Query: 241 caag 244 |||| Sbjct: 470 caag 473
>gb|AY917772.1| Uncultured bacterium clone 1971a-16 16S ribosomal RNA gene, partial sequence Length = 755 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 313 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 314 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 373 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 374 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcggagaagaatcaatgacg 433 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 493 Query: 241 caag 244 |||| Sbjct: 494 caag 497
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140236 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 140177 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140176 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 140117 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 140116 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 140057 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140056 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139997 Query: 241 caag 244 |||| Sbjct: 139996 caag 139993 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102189 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102248 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102249 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102308 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102309 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102368 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102369 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102428 Query: 241 caag 244 |||| Sbjct: 102429 caag 102432
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139114 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139055 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139054 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138995 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 138994 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 138935 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138934 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 138875 Query: 241 caag 244 |||| Sbjct: 138874 caag 138871 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102229 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102288 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102289 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102348 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102349 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102408 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102409 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102468 Query: 241 caag 244 |||| Sbjct: 102469 caag 102472
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139112 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139053 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139052 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138993 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 138992 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 138933 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138932 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 138873 Query: 241 caag 244 |||| Sbjct: 138872 caag 138869 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102226 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102286 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102346 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102406 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102465 Query: 241 caag 244 |||| Sbjct: 102466 caag 102469
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139023 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 138964 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138963 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138904 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 138903 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 138844 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138843 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 138784 Query: 241 caag 244 |||| Sbjct: 138783 caag 138780 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102105 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102164 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102165 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102224 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102225 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102284 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102285 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102344 Query: 241 caag 244 |||| Sbjct: 102345 caag 102348
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 283 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 343 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | |||||||||||||||||||||||||||| || Sbjct: 344 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaacaatggcg 403 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 463 Query: 241 caag 244 |||| Sbjct: 464 caag 467
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139614 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139555 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139554 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 139495 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 139494 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 139435 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139434 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139375 Query: 241 caag 244 |||| Sbjct: 139374 caag 139371 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103012 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 103071 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103072 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 103131 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 103132 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 103191 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103192 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 103251 Query: 241 caag 244 |||| Sbjct: 103252 caag 103255
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121491 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 121432 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121431 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 121372 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 121371 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 121312 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121311 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 121252 Query: 241 caag 244 |||| Sbjct: 121251 caag 121248 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86611 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 86670 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86671 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 86730 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 86731 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 86790 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86791 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 86850 Query: 241 caag 244 |||| Sbjct: 86851 caag 86854
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139355 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 139296 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139295 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 139236 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 139235 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 139176 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139175 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 139116 Query: 241 caag 244 |||| Sbjct: 139115 caag 139112 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102783 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102842 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102843 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102902 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102903 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102962 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102963 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 103022 Query: 241 caag 244 |||| Sbjct: 103023 caag 103026
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143366 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 143307 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143306 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 143247 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 143246 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 143187 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 143186 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 143127 Query: 241 caag 244 |||| Sbjct: 143126 caag 143123 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105933 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 105992 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105993 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 106052 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 106053 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 106112 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106113 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 106172 Query: 241 caag 244 |||| Sbjct: 106173 caag 106176
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138992 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 138933 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138932 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138873 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 138872 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 138813 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138812 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 138753 Query: 241 caag 244 |||| Sbjct: 138752 caag 138749 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102070 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 102129 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102130 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 102189 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 102190 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 102249 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102250 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 102309 Query: 241 caag 244 |||| Sbjct: 102310 caag 102313
>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence Length = 1435 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 284 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 345 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 404 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 464 Query: 241 caag 244 |||| Sbjct: 465 caag 468
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||| |||||||||| |||||||| Sbjct: 346 gcgtggaggtagaaggcccacgggtcgtaaactccttttcccggagaagaagcaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||| |||||||||| |||||||| Sbjct: 346 gcgtggaggtagaaggcccacgggtcgtaaactccttttcccggagaagaagcaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>emb|AJ252712.1|PPL252712 Solanum tuberosum leukoplast 16S rRNA gene (partial) clone RC-III-13 Length = 1008 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 312 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 372 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 373 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 432 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 433 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 492 Query: 241 caag 244 |||| Sbjct: 493 caag 496
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 312 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 372 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 373 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 432 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 433 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 492 Query: 241 caag 244 |||| Sbjct: 493 caag 496
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 428 bits (216), Expect = e-117 Identities = 237/244 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84592 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 84651 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84652 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 84711 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 84712 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatgacg 84771 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84772 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 84831 Query: 241 caag 244 |||| Sbjct: 84832 caag 84835
>emb|AM159434.1| Uncultured bacterium 16S rRNA gene, clone RB45-28 Length = 995 Score = 426 bits (215), Expect = e-116 Identities = 239/245 (97%), Gaps = 4/245 (1%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 300 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctacgggaggcagc---ggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 357 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gcgtggaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 417 Query: 181 gtatctgaggaataagcatcggc-taactctgtgccagcagccgcggtaagacagaggat 239 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 418 gtatctgaggaataagcttcggcttaactctgtgccagcagccgcggtaagacagaggat 477 Query: 240 gcaag 244 ||||| Sbjct: 478 gcaag 482
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4459 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 4518 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4519 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 4578 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 4579 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 4638 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4639 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 4698 Query: 241 caag 244 |||| Sbjct: 4699 caag 4702
>gb|AY827072.1| Uncultured Oscillatoriales cyanobacterium clone X26 16S ribosomal RNA gene, partial sequence Length = 452 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 167 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 227 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 228 gcgtggaggaagaaagcctacgggtcgtaaacttcttttctcggagaggaaacaatgacg 287 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 288 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggacg 347 Query: 241 caag 244 |||| Sbjct: 348 caag 351
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7414 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 7473 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7474 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 7533 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 7534 gcgtgaaggtagaaggcctacgggtcatgaacttcttttcccggagaagaagcaatgacg 7593 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7594 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 7653 Query: 241 caag 244 |||| Sbjct: 7654 caag 7657
>gb|AF128638.1| Uncultured soil bacterium C051 16S ribosomal RNA, partial sequence Length = 590 Score = 420 bits (212), Expect = e-114 Identities = 237/244 (97%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 250 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 310 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 311 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaa-aatgacg 369 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 429 Query: 241 caag 244 |||| Sbjct: 430 caag 433
>gb|AY795633.2| Uncultured Oscillatoriales cyanobacterium clone Veg.-frei_9_29.07 16S ribosomal RNA gene, partial sequence Length = 646 Score = 420 bits (212), Expect = e-114 Identities = 237/244 (97%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 284 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 345 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaa-aatgacg 403 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 463 Query: 241 caag 244 |||| Sbjct: 464 caag 467
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136429 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 136370 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136369 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 136310 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 136309 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 136250 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136249 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 136190 Query: 241 caag 244 |||| Sbjct: 136189 caag 136186 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100449 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 100508 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100509 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 100568 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 100569 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 100628 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100629 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 100688 Query: 241 caag 244 |||| Sbjct: 100689 caag 100692
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135246 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 135187 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135186 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 135127 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 135126 gcgtggaggcagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 135067 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135066 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 135007 Query: 241 caag 244 |||| Sbjct: 135006 caag 135003 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98199 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 98258 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98259 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 98318 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 98319 gcgtggaggcagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 98378 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98379 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 98438 Query: 241 caag 244 |||| Sbjct: 98439 caag 98442
>gb|AY102879.1| Uncultured embryophyte clone BCM1-32B 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 685 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 245 atcagtagctggttcgagaggatgatcagccacattgggactgagacacggcccagactc 304 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 364 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | |||||||||||||||||||||| |||||||| Sbjct: 365 gcgtggaggtagaaggcccacgggtcatgaacttcttttctcggagaagaagcaatgacg 424 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 425 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 484 Query: 241 caag 244 |||| Sbjct: 485 caag 488
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 217 atcagtagctggtccgagaggatgatcagccacactgggactgagacaaggcccagactc 276 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 336 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| Sbjct: 337 gcgtggaggtaaaaggcctacgggtcatgaacttcttttcccggagaagaaacaatgacg 396 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 456 Query: 241 caag 244 |||| Sbjct: 457 caag 460
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 276 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 336 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| || |||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 337 gcgtggaggtagagggcctacgggtcgtgaacttcttttccaggagaagaagcaatgacg 396 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 456 Query: 241 caag 244 |||| Sbjct: 457 caag 460
>gb|AF419246.1|AF419246 Medicago sativa 16S ribosomal RNA gene, partial sequence Length = 633 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 516 atcagtagctggtccgagaggatgatcagccacactgggactgagacaaggcccagactc 457 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 397 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 396 gcgtggaggtaaaaggcctacgggtcatgaacttcttttcctggagaagaaacaatgacg 337 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 277 Query: 241 caag 244 |||| Sbjct: 276 caag 273
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 420 bits (212), Expect = e-114 Identities = 237/244 (97%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82504 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 82563 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82564 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 82623 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 82624 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaa-aatgacg 82682 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82683 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 82742 Query: 241 caag 244 |||| Sbjct: 82743 caag 82746
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136429 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 136370 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136369 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 136310 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||| | ||||||||||| | |||||||| |||||||| Sbjct: 136309 gcgtggaggtagaaggcctacgggtcctgaacttcttttcccagagaagaagcaatgacg 136250 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136249 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 136190 Query: 241 caag 244 |||| Sbjct: 136189 caag 136186 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100335 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 100394 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100395 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 100454 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||| | ||||||||||| | |||||||| |||||||| Sbjct: 100455 gcgtggaggtagaaggcctacgggtcctgaacttcttttcccagagaagaagcaatgacg 100514 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100515 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 100574 Query: 241 caag 244 |||| Sbjct: 100575 caag 100578
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 21183 atcagtagctggtccgagaggatgatcagccacactgggactgagacatggcccagactc 21124 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| Sbjct: 21123 ctacgggaggcagcaatgtggaattttccgcaatgggagaaagcctgacggagcaatgct 21064 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21063 gtgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 21004 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 21003 gtatctgaggaataagcatcggctaactctatgccagcagccgtggtaagacagaggatg 20944 Query: 241 caag 244 |||| Sbjct: 20943 caag 20940
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 90106 atcagtagctggtccgagaggatgatcagccacactgggactgagacatggcccagactc 90047 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| Sbjct: 90046 ctacgggaggcagcaatgtggaattttccgcaatgggagaaagcctgacggagcaatgct 89987 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89986 gtgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 89927 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 89926 gtatctgaggaataagcatcggctaactctatgccagcagccgtggtaagacagaggatg 89867 Query: 241 caag 244 |||| Sbjct: 89866 caag 89863
>gb|AY806051.1| Angiosperm environmental sample clone BL004B83 16S ribosomal RNA gene, partial sequence Length = 755 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 251 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 252 ctacgggaggcagcagtggggaattttccgcagtgggcgaaagcttgacggagcaatgcc 311 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 312 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 371 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 372 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 431 Query: 241 caag 244 |||| Sbjct: 432 caag 435
>gb|AY806046.1| Angiosperm environmental sample clone BL004B76 16S ribosomal RNA gene, partial sequence Length = 756 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 250 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 251 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 310 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 311 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 370 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 371 gtatctggagaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 430 Query: 241 caag 244 |||| Sbjct: 431 caag 434
>gb|AY904436.1| Tracheophyte environmental sample clone Ben6 16S ribosomal RNA gene, partial sequence; chloroplast Length = 808 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 254 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 314 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 315 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 374 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 375 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 434 Query: 241 caag 244 |||| Sbjct: 435 caag 438
>gb|AF061065.1|AF061065 Plastid transformation vector pGS31A 16S ribosomal RNA gene, partial sequence; aminoglycoside 3'-adenyltransferase (aadA) gene, complete cds Length = 3136 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 229 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||| | ||||||||||| | |||||||| |||||||| Sbjct: 228 gcgtggaggtagaaggcctacgggtcctgaacttcttttcccagagaagaagcaatgacg 169 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 168 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 109 Query: 241 caag 244 |||| Sbjct: 108 caag 105
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 135481 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135480 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 135421 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 135420 gcgtgaaggtagaaggcctacgggtcatgaacttcttttcccggagaagaagcaatgacg 135361 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135360 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 135301 Query: 241 caag 244 |||| Sbjct: 135300 caag 135297 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99854 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 99913 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99914 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 99973 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 99974 gcgtgaaggtagaaggcctacgggtcatgaacttcttttcccggagaagaagcaatgacg 100033 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100034 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 100093 Query: 241 caag 244 |||| Sbjct: 100094 caag 100097
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137385 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 137326 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137325 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 137266 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||| | ||||||||||| | |||||||| |||||||| Sbjct: 137265 gcgtggaggtagaaggcctacgggtcctgaacttcttttcccagagaagaagcaatgacg 137206 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 137205 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 137146 Query: 241 caag 244 |||| Sbjct: 137145 caag 137142 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101264 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 101323 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101324 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 101383 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||| | ||||||||||| | |||||||| |||||||| Sbjct: 101384 gcgtggaggtagaaggcctacgggtcctgaacttcttttcccagagaagaagcaatgacg 101443 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101444 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 101503 Query: 241 caag 244 |||| Sbjct: 101504 caag 101507
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133955 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 133896 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133895 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 133836 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| || |||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 133835 gcgtggaggtagagggcctacgggtcgtgaacttcttttccaggagaagaagcaatgacg 133776 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133775 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 133716 Query: 241 caag 244 |||| Sbjct: 133715 caag 133712 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98501 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 98560 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98561 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 98620 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| || |||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 98621 gcgtggaggtagagggcctacgggtcgtgaacttcttttccaggagaagaagcaatgacg 98680 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98681 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 98740 Query: 241 caag 244 |||| Sbjct: 98741 caag 98744
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136422 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 136363 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136362 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 136303 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 136302 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 136243 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136242 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 136183 Query: 241 caag 244 |||| Sbjct: 136182 caag 136179 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100447 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 100506 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100507 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 100566 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 100567 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 100626 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100627 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 100686 Query: 241 caag 244 |||| Sbjct: 100687 caag 100690
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3439 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 3498 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3499 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 3558 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 3559 gcgtgaaggtagaaggcctacgggtcatgaacttcttttcccggagaagaagcaatgacg 3618 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3619 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 3678 Query: 241 caag 244 |||| Sbjct: 3679 caag 3682
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 420 bits (212), Expect = e-114 Identities = 237/244 (97%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 663 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 664 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 722 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 723 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 782 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 842 Query: 241 caag 244 |||| Sbjct: 843 caag 846
>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 346 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcggagaagaagcaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 406 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gene, partial sequence Length = 1437 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 346 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcggagaagaagcaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtatctgaagaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 346 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcggagaagaagcaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 406 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 1458 Score = 420 bits (212), Expect = e-114 Identities = 236/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 307 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 367 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||| ||| ||||||||||| |||||||||| |||||||| Sbjct: 368 gcgtggaggtagaaggcccacgggccgtgaacttcttttcccggagaagaagcaatgacg 427 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 428 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 487 Query: 241 caag 244 |||| Sbjct: 488 caag 491
>gb|DQ171558.1| Uncultured eukaryote clone WS08A_C04 16S ribosomal RNA gene, partial sequence; chloroplast Length = 769 Score = 414 bits (209), Expect = e-113 Identities = 239/245 (97%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 193 atcagtagctggtccgagaggatgatca-ccacactgggactgagacacggcccagactc 251 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 311 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttc-ttttctcggagaagaaacaatgac 179 || ||||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||| Sbjct: 312 gc-tggaggtagaaggcccacgggtcgtgaacttcgttttctcggagaagaaacaatgac 370 Query: 180 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggat 430 Query: 240 gcaag 244 ||||| Sbjct: 431 gcaag 435
>gb|AY806039.1| Angiosperm environmental sample clone BL004B64 16S ribosomal RNA gene, partial sequence Length = 740 Score = 414 bits (209), Expect = e-113 Identities = 237/245 (96%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 247 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 248 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 307 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 308 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 367 Query: 181 gtatctgaggaataagcatcggctaactctgtgcca-gcagccgcggtaagacagaggat 239 ||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 368 gtatctggggaataagcatcggctaactctgtgccaggcagccgcggtaatacagaggat 427 Query: 240 gcaag 244 ||||| Sbjct: 428 gcaag 432
>gb|AF038624.1|AF038624 Flindersia australis 16S ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 421 Score = 414 bits (209), Expect = e-113 Identities = 233/241 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 240 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 300 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 301 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 360 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 361 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaagatg 420 Query: 241 c 241 | Sbjct: 421 c 421
>gb|DQ221570.1| Uncultured bacterium clone BPH3C53006 16S ribosomal RNA gene, partial sequence Length = 399 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 229 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 230 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 289 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 290 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 349 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 398
>gb|DQ221569.1| Uncultured bacterium clone BPH3C53005 16S ribosomal RNA gene, partial sequence Length = 399 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 229 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 230 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 289 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 290 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 349 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 398
>gb|DQ221568.1| Uncultured bacterium clone BPH3C53004 16S ribosomal RNA gene, partial sequence Length = 399 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 229 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 230 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 289 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 290 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 349 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 398
>gb|DQ221567.1| Uncultured bacterium clone BPH3C53003 16S ribosomal RNA gene, partial sequence Length = 399 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 229 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 230 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 289 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 290 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 349 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 398
>gb|DQ221565.1| Uncultured bacterium clone BPH3C53001 16S ribosomal RNA gene, partial sequence Length = 400 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 230 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 231 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 290 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 291 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 350 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 399
>gb|DQ221550.1| Uncultured bacterium clone BPH3C50008 16S ribosomal RNA gene, partial sequence Length = 399 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 229 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 230 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 289 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 290 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 349 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 398
>gb|DQ221549.1| Uncultured bacterium clone BPH3C50007 16S ribosomal RNA gene, partial sequence Length = 439 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 269 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 270 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 329 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 330 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 389 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 438
>gb|DQ221548.1| Uncultured bacterium clone BPH3C50006 16S ribosomal RNA gene, partial sequence Length = 439 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 269 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 270 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 329 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 330 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 389 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 438
>gb|DQ221545.1| Uncultured bacterium clone BPH3C50003 16S ribosomal RNA gene, partial sequence Length = 439 Score = 414 bits (209), Expect = e-113 Identities = 224/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 269 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 270 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 329 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 330 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 389 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 438
>gb|AY043966.1| Uncultured embryophyte plastid clone NOS7.166WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 503 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 284 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ctacgggaggcagcagtacggaattttccgcaatgggcgaaagcctgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 345 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 404 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 464 Query: 241 caag 244 |||| Sbjct: 465 caag 468
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3308 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 3249 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3248 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 3190 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 3189 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 3130 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3129 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 3070 Query: 241 caag 244 |||| Sbjct: 3069 caag 3066
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3497 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 3438 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3437 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 3379 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 3378 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 3319 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3318 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 3259 Query: 241 caag 244 |||| Sbjct: 3258 caag 3255
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147073 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 147014 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 147013 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 146955 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 146954 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 146895 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146894 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 146835 Query: 241 caag 244 |||| Sbjct: 146834 caag 146831 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106255 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 106314 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106315 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 106373 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 106374 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 106433 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106434 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 106493 Query: 241 caag 244 |||| Sbjct: 106494 caag 106497
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 318 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 319 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 377 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 378 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 437 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 438 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 497 Query: 241 caag 244 |||| Sbjct: 498 caag 501
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151227 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 151168 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 151167 ctacgggaggcagcagtggggaattttctgcaatgggcgaaagcctgacagagcaatgcc 151108 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||| | ||||||||| |||| |||||||| | ||||||||||||||| Sbjct: 151107 gcgtggaggtagaaggtccacgggtcgtaaactccttttctcagggaagaaacaatgacg 151048 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151047 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 150988 Query: 241 caag 244 |||| Sbjct: 150987 caag 150984 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107235 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 107294 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 107295 ctacgggaggcagcagtggggaattttctgcaatgggcgaaagcctgacagagcaatgcc 107354 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||| | ||||||||| |||| |||||||| | ||||||||||||||| Sbjct: 107355 gcgtggaggtagaaggtccacgggtcgtaaactccttttctcagggaagaaacaatgacg 107414 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 107474 Query: 241 caag 244 |||| Sbjct: 107475 caag 107478
>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 315 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 316 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 374 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||||||| Sbjct: 375 gcgtggaggtagaaggcccacgggtcgtaaactccttttcttagagaagaaacaatgacg 434 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 435 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 494 Query: 241 caag 244 |||| Sbjct: 495 caag 498
>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 315 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 316 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 374 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||||||| Sbjct: 375 gcgtggaggtagaaggcccacgggtcgtaaactccttttcttagagaagaaacaatgacg 434 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 494 Query: 241 caag 244 |||| Sbjct: 495 caag 498
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 27127 atcagtagctggtccgagaggatgatcagccacactgggactgagacaaggcccagactc 27068 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27067 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 27008 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 27007 gcgtggaggtaaaaggcctacgggtcatgaacttcttttcctggagaagaaacaatgacg 26948 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26947 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 26888 Query: 241 caag 244 |||| Sbjct: 26887 caag 26884
>gb|AF393583.1| Chaetosphaeridium globosum SAG 26.98 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1461 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 282 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 342 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 343 gcgtggaggatgaaggcccacgggtcgtaaacttcttttcttggagaagaatcaatgacg 402 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 403 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 462 Query: 241 caag 244 |||| Sbjct: 463 caag 466
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3057 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 3116 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3117 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 3175 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 3176 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 3235 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3236 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 3295 Query: 241 caag 244 |||| Sbjct: 3296 caag 3299
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 83203 atcagtagctggtccgagaggatgatcagccacactgggactgagacaaggcccagactc 83144 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83143 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 83084 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 83083 gcgtggaggtaaaaggcctacgggtcatgaacttcttttcctggagaagaaacaatgacg 83024 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83023 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 82964 Query: 241 caag 244 |||| Sbjct: 82963 caag 82960
>emb|AJ232810.1|UEU232810 Unidentified eubacterium 16S rRNA gene (clone TRE1) Length = 519 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 242 atcagtagctggtccgagaggatgatcagccacactgggactgagacaaggcccagactc 301 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 361 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| Sbjct: 362 gcgtggaggtaaaaggcctacgggtcatgaacttcttttcccggagaagaaacaatgacg 421 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 422 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaagatg 481 Query: 241 caag 244 |||| Sbjct: 482 caag 485
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact33 Length = 1476 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 258 atcagtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactc 317 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 377 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | |||||||||||||||||| |||||||||||| Sbjct: 378 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaggaaacaatgacg 437 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 497 Query: 241 caag 244 |||| Sbjct: 498 caag 501
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128178 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 128119 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128118 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 128059 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 128058 gcgtggaggatgaaggcccacgggtcgtaaacttcttttcttggagaagaatcaatgacg 127999 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127998 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 127939 Query: 241 caag 244 |||| Sbjct: 127938 caag 127935 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91688 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 91747 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91748 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 91807 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 91808 gcgtggaggatgaaggcccacgggtcgtaaacttcttttcttggagaagaatcaatgacg 91867 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 91868 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 91927 Query: 241 caag 244 |||| Sbjct: 91928 caag 91931
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 700 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 701 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagctggacggagcaatgcc 760 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 761 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 820 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 821 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 880 Query: 241 caag 244 |||| Sbjct: 881 caag 884
>emb|AJ007448.1|PVU7448 Phaseolus vulgaris 16S rRNA gene, clone 8360, partial Length = 1057 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 277 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagaccc 336 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 396 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 397 gcgtgaaggtagaaggcctacgggtcatgaacttcttttcccggagaagaagcaatgacg 456 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 516 Query: 241 caag 244 |||| Sbjct: 517 caag 520
>emb|AJ007447.1|PVU7447 Phaseolus vulgaris 16S rRNA gene, clone 8206, partial Length = 1012 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 290 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 350 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| ||||| || Sbjct: 351 gcgtgaaggtagaaggcctacgggtcatgaacttcttttcccggagaagaagcaatgtcg 410 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gtatccggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 470 Query: 241 caag 244 |||| Sbjct: 471 caag 474
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1538 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1539 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 1597 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 1598 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 1657 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1658 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 1717 Query: 241 caag 244 |||| Sbjct: 1718 caag 1721
>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence Length = 1456 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 304 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 305 ctacgggaggcagcagtggggaattttctgcaatgggcgaaagcctgacagagcaatgcc 364 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||| | ||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 365 gcgtggaggtagaaggtccacgggtcgtaaactccttttctcagagaagaaacaatgacg 424 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 484 Query: 241 caag 244 |||| Sbjct: 485 caag 488
>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence Length = 1428 Score = 412 bits (208), Expect = e-112 Identities = 235/244 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 276 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 336 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 337 gcgtgaaggcagaaggcctacgggttgtgaacttcttttctcggagaagaagcaatgacg 396 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 397 gtatctgaggaataagcatcggccaactctgtgccagcagccgcggtaatacagaggatg 456 Query: 241 caag 244 |||| Sbjct: 457 caag 460
>gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gene, partial sequence Length = 1447 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 345 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 404 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 464 Query: 241 caag 244 |||| Sbjct: 465 caag 468
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 1013 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1012 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 954 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 953 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 894 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 893 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 834 Query: 241 caag 244 |||| Sbjct: 833 caag 830
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 412 bits (208), Expect = e-112 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 288 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 348 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 349 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 408 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||| || |||||||||||||| |||||||| |||||||||| Sbjct: 409 gtatctggggaataagcatcgnntanctctgtgccagcagncgcggtaatacagaggatg 468 Query: 241 caag 244 |||| Sbjct: 469 caag 472
>gb|AF419692.1| Uncultured bacterium C1_B022 16S ribosomal RNA gene, partial sequence Length = 1461 Score = 408 bits (206), Expect = e-111 Identities = 236/244 (96%), Gaps = 2/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 249 atcagtagctggtccgagaggatgatcagccacactgggactgagacacgscc-agactc 307 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 308 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 366 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 367 gcgtggaggtagaaggcccacgggtcgtgaacttcttttctcggagaagaaacaatgacg 426 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 427 ttatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagagggtg 486 Query: 241 caag 244 |||| Sbjct: 487 caag 490
>gb|DQ419724.1| Uncultured bacterium clone biogas-DT-b7 16S ribosomal RNA gene, partial sequence Length = 472 Score = 406 bits (205), Expect = e-110 Identities = 223/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggttcgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 364 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 472
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 406 bits (205), Expect = e-110 Identities = 235/244 (96%), Gaps = 2/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 939 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 940 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc--gacggagcaatgcc 997 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 998 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 1057 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1058 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 1117 Query: 241 caag 244 |||| Sbjct: 1118 caag 1121
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 406 bits (205), Expect = e-110 Identities = 235/244 (96%), Gaps = 2/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 612 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 613 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc--gacggagcaatgcc 670 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 671 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 730 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 731 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 790 Query: 241 caag 244 |||| Sbjct: 791 caag 794
>gb|AY939036.1| Uncultured bacterium clone PO74OL1C03 16S small subunit ribosomal RNA gene, partial sequence Length = 449 Score = 406 bits (205), Expect = e-110 Identities = 223/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 279 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 339 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 340 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 399 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 448
>gb|DQ221566.1| Uncultured bacterium clone BPH3C53002 16S ribosomal RNA gene, partial sequence Length = 399 Score = 406 bits (205), Expect = e-110 Identities = 223/229 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 atcagtggctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 229 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 230 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 289 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 290 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacg 349 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 398
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 406 bits (205), Expect = e-110 Identities = 236/245 (96%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagac-t 59 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 427 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagacct 486 Query: 60 cctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgc 119 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 487 cctacgggaggcagcagtggggaattttccgcaatgggcgaaagctggacggagcaatgc 546 Query: 120 cgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgac 179 ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||| Sbjct: 547 cgcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgac 606 Query: 180 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggat 239 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 607 ggtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggat 666 Query: 240 gcaag 244 ||||| Sbjct: 667 gcaag 671
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55934 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 55875 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 55874 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 55816 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||| || ||||||| |||||||| Sbjct: 55815 gcgtggaggtagaaggcccacgggtcgtgaacttcttttaccgaagaagaagcaatgacg 55756 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55755 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 55696 Query: 241 caag 244 |||| Sbjct: 55695 caag 55692 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33894 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 33953 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 33954 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 34012 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||| || ||||||| |||||||| Sbjct: 34013 gcgtggaggtagaaggcccacgggtcgtgaacttcttttaccgaagaagaagcaatgacg 34072 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34073 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 34132 Query: 241 caag 244 |||| Sbjct: 34133 caag 34136
>gb|DQ160078.1| Taraxacum officinale To61-12 mRNA, partial sequence Length = 350 Score = 404 bits (204), Expect = e-110 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 119 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 120 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctaacggagcaatgcc 179 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| | |||||||| |||||||| Sbjct: 180 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccagagaagaagcaatgacg 239 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 240 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 299 Query: 241 caag 244 |||| Sbjct: 300 caag 303
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 404 bits (204), Expect = e-110 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 406 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 407 ctacgggaggcagcagtgggggattttccgcaatgggcgaaagcctgacggagcaatgcc 466 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||| |||||||||||||||||||| | || |||||||||||||| Sbjct: 467 gcgtggaggtataaggcccacgggtcgtcaacttcttttacctgataagaaacaatgacg 526 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 gtatctggtgaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 586 Query: 241 caag 244 |||| Sbjct: 587 caag 590
>gb|DQ419617.1| Uncultured bacterium clone biogas-DE-b37 16S ribosomal RNA gene, partial sequence Length = 471 Score = 404 bits (204), Expect = e-110 Identities = 222/228 (97%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggttcgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 364 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaagcaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggta 228 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctggggaataagcatcggctaactctgtgccagcagccgcggta 471
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 404 bits (204), Expect = e-110 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 349 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| |||||| || |||| ||||||| |||||||| |||||||| Sbjct: 350 gcgtggaggtagaaggcccacgggttgtaaactccttttcttagagaagaagcaatgacg 409 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtatctaaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 469 Query: 241 caag 244 |||| Sbjct: 470 caag 473
>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1486 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 314 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 315 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 373 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 374 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 433 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 434 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 493 Query: 241 caag 244 |||| Sbjct: 494 caag 497
>gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1448 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 307 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 308 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 366 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 367 gcgtgaaggcagaaggcctacgggtcgtgaacttcttttctcggagaagaaccaatgacg 426 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 427 gtatctgaggaataagcatcggccaactctgtgccagcagccgcggtaatacagaggatg 486 Query: 241 caag 244 |||| Sbjct: 487 caag 490
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 294 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 295 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 353 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 354 gcgtgaaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 413 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 414 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 473 Query: 241 caag 244 |||| Sbjct: 474 caag 477
>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1430 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgaggggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 344 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 345 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 404 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 464 Query: 241 caag 244 |||| Sbjct: 465 caag 468
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 404 bits (204), Expect = e-110 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 328 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 388 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| |||||| || |||| ||||||| |||||||| |||||||| Sbjct: 389 gcgtggaggtagaaggcccacgggttgtaaactccttttcttagagaagaagcaatgacg 448 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 gtatctaaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 508 Query: 241 caag 244 |||| Sbjct: 509 caag 512
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 404 bits (204), Expect = e-110 Identities = 234/244 (95%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154905 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 154846 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154845 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 154786 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| |||||| || |||| ||||||| |||||||| |||||||| Sbjct: 154785 gcgtggaggtagaaggcccacgggttgtaaactccttttcttagagaagaagcaatgacg 154726 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154725 gtatctaaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 154666 Query: 241 caag 244 |||| Sbjct: 154665 caag 154662 Score = 404 bits (204), Expect = e-110 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113761 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 113820 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113821 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 113880 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| |||||| || |||| ||||||| |||||||| |||||||| Sbjct: 113881 gcgtggaggtagaaggcccacgggttgtaaactccttttcttagagaagaagcaatgacg 113940 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113941 gtatctaaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 114000 Query: 241 caag 244 |||| Sbjct: 114001 caag 114004
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 881 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 882 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 940 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||||||||| || ||||||| |||||||| Sbjct: 941 gcgtggaggtagaaggcccacgggtcgtgaacttcttttaccgaagaagaagcaatgacg 1000 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 1060 Query: 241 caag 244 |||| Sbjct: 1061 caag 1064
>gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene, partial sequence Length = 1443 Score = 404 bits (204), Expect = e-110 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 282 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 283 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 341 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| |||||||| Sbjct: 342 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcaatgacg 401 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 402 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 461 Query: 241 caag 244 |||| Sbjct: 462 caag 465
>gb|DQ221547.1| Uncultured bacterium clone BPH3C50005 16S ribosomal RNA gene, partial sequence Length = 440 Score = 400 bits (202), Expect = e-108 Identities = 224/230 (97%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 269 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 270 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 329 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctc-ggagaagaaacaatgac 179 |||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 330 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccnggagaagaaacaatgac 389 Query: 180 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ggtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 439
>gb|DQ221544.1| Uncultured bacterium clone BPH3C50002 16S ribosomal RNA gene, partial sequence Length = 440 Score = 400 bits (202), Expect = e-108 Identities = 224/230 (97%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 269 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 270 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgcc 329 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctc-ggagaagaaacaatgac 179 |||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 330 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccnggagaagaaacaatgac 389 Query: 180 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ggtatctggggaataagcatcggctaactctgtgccagcagccgcggtaa 439
>gb|DQ419753.1| Uncultured bacterium clone biogas-LD-B46 16S ribosomal RNA gene, partial sequence Length = 472 Score = 398 bits (201), Expect = e-108 Identities = 222/229 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 364 gcgtgaaggcagaaggcccacgggtcatgaacttcttttctcggagaagaaaaaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaa 472
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140207 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 140266 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 140267 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 140326 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||| |||||||| |||||||| || ||||| Sbjct: 140327 gcgtggaggcagaaggcccacgggtcgtaaactccttttctcagagaagaagcagtgacg 140386 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 140387 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 140446 Query: 241 caag 244 |||| Sbjct: 140447 caag 140450 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92644 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 92585 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 92584 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 92525 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||| |||||||| |||||||| || ||||| Sbjct: 92524 gcgtggaggcagaaggcccacgggtcgtaaactccttttctcagagaagaagcagtgacg 92465 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 92464 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 92405 Query: 241 caag 244 |||| Sbjct: 92404 caag 92401
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141541 atcagtagctggtccgggaggatgatcagccacactgggactgagacacggcccagactc 141482 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141481 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 141422 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||| ||| |||||||||||||| || ||| ||||||||||||||||| |||||||| Sbjct: 141421 gcgtgggggtagaaggcctacgggttgtaaaccccttttctcggagaagaagcaatgacg 141362 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || Sbjct: 141361 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacggagggtg 141302 Query: 241 caag 244 |||| Sbjct: 141301 caag 141298 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80336 atcagtagctggtccgggaggatgatcagccacactgggactgagacacggcccagactc 80395 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80396 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 80455 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||| ||| |||||||||||||| || ||| ||||||||||||||||| |||||||| Sbjct: 80456 gcgtgggggtagaaggcctacgggttgtaaaccccttttctcggagaagaagcaatgacg 80515 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || Sbjct: 80516 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacggagggtg 80575 Query: 241 caag 244 |||| Sbjct: 80576 caag 80579
>gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 396 bits (200), Expect = e-107 Identities = 234/244 (95%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| Sbjct: 290 ctacgggaggcagcagtggggaattttctgcaatgggcgaaagc-tgacagagcaatgcc 348 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||| | ||||||||| |||| ||||||||| ||||||||||||||| Sbjct: 349 gcgtggaggtagaaggtccacgggtcgtaaactccttttctcgaggaagaaacaatgacg 408 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 468 Query: 241 caag 244 |||| Sbjct: 469 caag 472
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 396 bits (200), Expect = e-107 Identities = 234/244 (95%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 242 atcagtagctggtctgagaggatgatcagccacactgggactgagacacagcccagactc 301 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 302 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 360 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| |||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 361 gcgtgaaggtagaaggcccacgggtcgtgaacttcttttcccggagaagaagcaatgacg 420 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 480 Query: 241 caag 244 |||| Sbjct: 481 caag 484
>gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 396 bits (200), Expect = e-107 Identities = 234/244 (95%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 312 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 313 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 371 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| |||||||| |||||||| || ||||| Sbjct: 372 gcgtggaggtagaaggcccacgggtcgtaaactccttttctcagagaagaagcagtgacg 431 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 432 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 491 Query: 241 caag 244 |||| Sbjct: 492 caag 495
>gb|AF393604.1| Nitella sp. CL-2002 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1465 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 atcagtagctgatctgagaggatgatcagccacactgggactgagacacggcccagactc 293 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 353 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||| || || | |||| ||||||| Sbjct: 354 gcgtggaggtagaaggcctacgggtcgtaaactccttttttcagaaacgaaaaaatgacg 413 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 gtatctgaagaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 473 Query: 241 caag 244 |||| Sbjct: 474 caag 477
>gb|AF393595.1| Coleochaete scutata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1462 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 282 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 342 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||| || ||||||| || |||| |||||||| ||||||||| ||||||| Sbjct: 343 gcgtggaggaagaaagcttacgggttgtaaactccttttctcagagaagaaaaaatgacg 402 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 403 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 462 Query: 241 caag 244 |||| Sbjct: 463 caag 466
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||| || ||||||| || |||| |||||||| ||||||||| ||||||| Sbjct: 346 gcgtggaggaagaaagcttacgggttgtaaactccttttctcagagaagaaaaaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 406 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>gb|AF393592.1| Coleochaete nitellarum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 283 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 343 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||| || ||||||| || |||| |||||||| ||||||||| ||||||| Sbjct: 344 gcgtggaggaagaaagcttacgggttgtaaactccttttctcagagaagaaaaaatgacg 403 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 404 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 463 Query: 241 caag 244 |||| Sbjct: 464 caag 467
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctgatctgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||| || |||| |||| |||||| Sbjct: 364 gcgtggaggtagaaggcctacgggtcgtaaactccttttttcagagacgaaatcatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctgaagaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 483 Query: 241 caag 244 |||| Sbjct: 484 caag 487
>gb|AF393585.1| Chara sp. CL-2002-1 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctgatctgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||| || |||| |||| |||||| Sbjct: 364 gcgtggaggtagaaggcctacgggtcgtaaactccttttttcagagacgaaatcatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctgaagaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 483 Query: 241 caag 244 |||| Sbjct: 484 caag 487
>gb|AF393580.1| Chara corallina small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1479 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 atcagtagctgatctgagaggatgatcagccacactgggactgagacacggcccagactc 298 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 358 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||| || |||| |||| |||||| Sbjct: 359 gcgtggaggtagaaggcctacgggtcgtaaactccttttttcagagacgaaatcatgacg 418 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gtatctgaagaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 478 Query: 241 caag 244 |||| Sbjct: 479 caag 482
>gb|U24583.1|DMU24583 Doodia maxima chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||| ||||||||||||||||| || ||||| Sbjct: 346 gcgtggaggcagaaggcccacgggtcgtaaactccttttctcggagaagaagcagtgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 406 gtatccgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>gb|U24579.1|COU24579 Coleochaete orbicularis chloroplast 16S rRNA gene, partial sequence Length = 1617 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 277 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 337 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||| || ||||||| || |||| |||||||| ||||||||| ||||||| Sbjct: 338 gcgtggaggaagaaagcttacgggttgtaaactccttttctcagagaagaaaaaatgacg 397 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 398 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatg 457 Query: 241 caag 244 |||| Sbjct: 458 caag 461
>emb|Z81323.1|PAA16SRRN P.aquilinum chloroplast 16S rRNA gene Length = 1372 Score = 396 bits (200), Expect = e-107 Identities = 234/244 (95%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 262 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 263 ctacgggaggcagcagtggggaatcttccgcaatgggcgaaagc-tgacggagcaatgcc 321 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| ||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct: 322 gcgtggaggcagaaggcccacgggtcgtaaactccttttctcggagaagaagcaatgacg 381 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 382 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacaggggatg 441 Query: 241 caag 244 |||| Sbjct: 442 caag 445
>emb|X75519.1|CSPL16SR Chara spec. plastid 16S rRNA gene Length = 1515 Score = 396 bits (200), Expect = e-107 Identities = 233/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 atcagtagctgatctgagaggatgatcagccacactgggactgagacacggcccagactc 334 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 394 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| |||| ||||| || |||| |||| |||||| Sbjct: 395 gcgtggaggtagaaggcctacgggtcgtaaactccttttttcagagacgaaatcatgacg 454 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 gtatctgaagaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 514 Query: 241 caag 244 |||| Sbjct: 515 caag 518
>gb|DQ221678.1| Uncultured bacterium clone BPH3085 16S ribosomal RNA gene, partial sequence Length = 400 Score = 396 bits (200), Expect = e-107 Identities = 218/224 (97%) Strand = Plus / Plus Query: 6 tagctggtccgagaggatgatcagccacactgggactgagacacggcccagactcctacg 65 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 tagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacg 235 Query: 66 ggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtg 125 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 236 ggaggcagcagtggggaattttccgcaatgggcgaaagcttgacggagcaatgccgcgtg 295 Query: 126 gaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacggtatc 185 ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 296 gaggtagaaggcctacgggtcgtgaacttcttttcccggagaagaaacaatgacggtatc 355 Query: 186 tgaggaataagcatcggctaactctgtgccagcagccgcggtaa 229 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 tggggaataagcatcggctaactctgtgccagcagccgcggtaa 399
>emb|AM159403.1| Uncultured bacterium 16S rRNA gene, clone RB45-20 Length = 993 Score = 394 bits (199), Expect = e-107 Identities = 239/247 (96%), Gaps = 4/247 (1%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 296 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 356 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gctgtgaggtggaaggcccacgggtcgtcaacttcttttctcggagaagaaacaatgacg 416 Query: 181 g-tatctgaggaataagca-tcggctaac-tctgtgccagcagccgcggtaagacagagg 237 | ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||| Sbjct: 417 gttatctgaggaataagcattcggctaacttctgtgccagcagccgc-gtaagacagagg 475 Query: 238 atgcaag 244 ||||||| Sbjct: 476 atgcaag 482
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 392 bits (198), Expect = e-106 Identities = 232/244 (95%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 237 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcnnnnnntc 296 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 297 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgcc 355 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||||||||||||| ||||||||||| | |||||||| |||||||| Sbjct: 356 gcgtggaggtagaaggcctacgggtcgtgaacttcttttcccagagaagaagcaatgacg 415 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 475 Query: 241 caag 244 |||| Sbjct: 476 caag 479
>gb|AY939471.1| Uncultured bacterium clone PORABL3B05 16S small subunit ribosomal RNA gene, partial sequence Length = 443 Score = 392 bits (198), Expect = e-106 Identities = 222/230 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 214 atcagtagctggtccgagaggatgatcagccacactgggactgagacaaggcccagactc 273 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 333 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 334 gcgtggaggtaaaaggcctacgggtcatgaacttcttttcctggagaagaaacaatgacg 393 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaag 230 ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gtatctggggaataagcatcggctaactctgtgccagcagccgcggtaag 443
>gb|AF038625.1|AF038625 Flindersia pimenteliana 16S ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 421 Score = 392 bits (198), Expect = e-106 Identities = 233/242 (96%), Gaps = 2/242 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 240 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 300 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 301 gcgtggaggtagaaggcccacgggtcgtgaacttcttttcccggagaag-aacaatgacg 359 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccg-cggtaagacagaggat 239 ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 360 gtatctggggaataagcatcggctaactctgtgccagcagccgccggtaatacagaagat 419 Query: 240 gc 241 || Sbjct: 420 gc 421
>gb|DQ419656.1| Uncultured bacterium clone biogas-DM1-b12 16S ribosomal RNA gene, partial sequence Length = 483 Score = 391 bits (197), Expect = e-105 Identities = 218/225 (96%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 303 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 363 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||| | ||||||||||| |||||||||| |||||||| Sbjct: 364 gcgtggaggtagaaggcccacgggtcatgaacttcttttcccggagaagaagcaatgacg 423 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcg 225 ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtatctggggaataagcatcggctaactctgtgccagcagccgcg 468
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 391 bits (197), Expect = e-105 Identities = 235/245 (95%), Gaps = 2/245 (0%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacact-gggactgagacacggcccagact 59 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 449 atcagtagctggtccgagaggatgatcagccacactcgggactgagacacggcccagact 508 Query: 60 cctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgc 119 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 509 cctacgggaggcagcagtggggaattttccgcaatgggcgaaagc-tgacggagcaatgc 567 Query: 120 cgcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgac 179 ||||||||||| ||||||||||||||| | ||||||||||| |||||||||| |||||| Sbjct: 568 cgcgtggaggtagaaggcctacgggtcatgaacttcttttcccggagaagaataaatgac 627 Query: 180 ggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggat 239 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 628 ggtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggat 687 Query: 240 gcaag 244 ||||| Sbjct: 688 gcaag 692
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93337 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 93396 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 93397 ctacgggaggcagcagtggggaattttccgcaatgggcgcaagcctgacggagcaatgcc 93456 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||||||| |||||| ||||||||| |||| |||||||| |||||||| |||||| Sbjct: 93457 gcgtggaggaagaaggctcacgggtcgtaaactccttttctcagagaagaagacatgacg 93516 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93517 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 93576 Query: 241 caag 244 |||| Sbjct: 93577 caag 93580
>gb|AY827024.1| Uncultured bacterium clone N32 16S ribosomal RNA gene, partial sequence Length = 452 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 167 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 168 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatacc 227 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| ||||||| ||||||||| |||| ||||||| |||||||| |||||| Sbjct: 228 gcgtggaggtagaaggcccacgggtcgtaaactccttttctgagagaagaagatatgacg 287 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gtatctcaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 347 Query: 241 caag 244 |||| Sbjct: 348 caag 351
>gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 1475 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 atcagtagttggtctgagaggatgatcagccacactgggactgagacacggcccagactc 332 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 392 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| |||||| ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 393 gcgtgaagggagaaggctcacgggtcgtaaacttcttttctcggagaagaataaatgacg 452 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 453 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaaaacagaggatg 512 Query: 241 caag 244 |||| Sbjct: 513 caag 516
>gb|AY553213.1| Auxenochlorella protothecoides 16S small subunit ribosomal RNA gene, partial sequence; chloroplast Length = 1475 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Minus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 1155 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1154 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 1095 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 1094 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 1035 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 975 Query: 241 caag 244 |||| Sbjct: 974 caag 971
>emb|X16579.1|CHCVSSRN Chlorella vulgaris chloroplast DNA for small subunit ribosomal RNA Length = 1494 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 328 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 329 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 388 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 389 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 448 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 508 Query: 241 caag 244 |||| Sbjct: 509 caag 512
>gb|AF350259.1|AF350259 Chlorella vulgaris 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 578 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 187 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 188 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 247 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 248 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 307 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 367 Query: 241 caag 244 |||| Sbjct: 368 caag 371
>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 289 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ttacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 349 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||| ||||||||| |||| |||||||| || |||| ||||||| Sbjct: 350 gcgtggaggtagaaggctcacgggtcgtaaactccttttctcagaaaagatgtaatgacg 409 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 469 Query: 241 caag 244 |||| Sbjct: 470 caag 473
>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1464 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 285 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 286 ttacgggaggcagcagtggggaattttccgcaatgggcgagagcctgacggagcaatgcc 345 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 |||||||||| |||||| ||| ||||| |||| |||||||| ||||||| |||||||| Sbjct: 346 gcgtggaggtagaaggctcacgagtcgtaaactccttttctcagagaagatgcaatgacg 405 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 465 Query: 241 caag 244 |||| Sbjct: 466 caag 469
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22566 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 22625 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22626 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 22685 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 22686 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 22745 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22746 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 22805 Query: 241 caag 244 |||| Sbjct: 22806 caag 22809 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 40 actgagacacggcccagactcctacgggaggcagcagtggggaa 83 ||||||| |||||||||||||||||| |||||||||||| |||| Sbjct: 32919 actgagatacggcccagactcctacgagaggcagcagtgaggaa 32876
>emb|AJ387750.1|CVU387750 Chlorella vulgaris 16S rRNA gene CS12 region, strain IAM C-208 Length = 444 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 78 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 138 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| |||||||| |||| || ||||||||||||| ||||||||| | ||||| Sbjct: 139 gcgtgaaggatgaaggcctgtgggttgtaaacttcttttctcagagaagaaaaattgacg 198 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 258 Query: 241 caag 244 |||| Sbjct: 259 caag 262
>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence Length = 1454 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 atcagtagttggtctgagaggatgatcagccacactgggactgagacacggcccagactc 305 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 365 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| |||||| ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 366 gcgtgaaggaagaaggctcacgggtcgtaaacttcttttctcggagaagaataaatgacg 425 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 426 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaaaacagaggatg 485 Query: 241 caag 244 |||| Sbjct: 486 caag 489
>emb|AJ242754.1|CVU242754 Chlorella vulgaris chloroplast 16S rRNA gene, partial, strain NIES 227 Length = 479 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 106 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 166 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 167 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 226 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 286 Query: 241 caag 244 |||| Sbjct: 287 caag 290
>emb|AJ242753.1|CVU242753 Chlorella vulgaris chloroplast 16S rRNA gene, partial, strain IAM C-27 Length = 475 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 106 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 166 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 167 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 226 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 286 Query: 241 caag 244 |||| Sbjct: 287 caag 290
>emb|AJ242750.1|CVU242750 Chlorella vulgaris chloroplast 16S rRNA gene, partial, strain CCAP 211/19 Length = 481 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 105 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 165 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 166 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 225 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 285 Query: 241 caag 244 |||| Sbjct: 286 caag 289
>dbj|D11347.1|CHLCPV16S Chlorella vulgaris (strain 211-1e) chloroplast gene for 16S ribosomal RNA Length = 1450 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 302 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 303 ctacgggaggcagcagtgaggaattttccgcaatgggcgacagcctgacggagcaatgcc 362 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| ||||||||| |||| || ||||||||||||| |||||||| || ||||| Sbjct: 363 gcgtgaaggatgaaggcctatgggttgtaaacttcttttctcagagaagaagcattgacg 422 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 482 Query: 241 caag 244 |||| Sbjct: 483 caag 486
>dbj|D11346.1|CHLCP16S Chlorella kessleri (strain 211-11h) chloroplast gene for 16S ribosomal RNA Length = 1545 Score = 389 bits (196), Expect = e-105 Identities = 232/244 (95%) Strand = Plus / Plus Query: 1 atcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactc 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 atcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactc 306 Query: 61 ctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgcc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 ctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgcc 366 Query: 121 gcgtggaggtggaaggcctacgggtcgtcaacttcttttctcggagaagaaacaatgacg 180 ||||| ||| |||||||| |||| || ||||||||||||| ||||||||| | ||||| Sbjct: 367 gcgtgaaggatgaaggcctgtgggttgtaaacttcttttctcagagaagaaaaattgacg 426 Query: 181 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatg 486 Query: 241 caag 244 |||| Sbjct: 487 caag 490 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,042,692 Number of Sequences: 3902068 Number of extensions: 3042692 Number of successful extensions: 468804 Number of sequences better than 10.0: 205847 Number of HSP's better than 10.0 without gapping: 205674 Number of HSP's successfully gapped in prelim test: 210 Number of HSP's that attempted gapping in prelim test: 78746 Number of HSP's gapped (non-prelim): 375035 length of query: 378 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 356 effective length of database: 17,147,199,772 effective search space: 6104403118832 effective search space used: 6104403118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
