>ASPX_MOUSE (P50289) Acrosomal protein SP-10 precursor (Acrosomal vesicle|
           protein 1) (MSA-63)
          Length = 261

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 410 HSQMPHSSADHIQAAVSKTAAALGSGNQSSHKLAARHSAGSR*NHHTLVKHN 255
           HS     S++H  A    +A    SG QSS  ++  H +G   + HT  +H+
Sbjct: 68  HSSSEQESSEH--AVAEHSAGEHSSGEQSSEHMSGDHMSGEHLSEHTSEEHS 117

>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 26.2 bits (56), Expect(2) = 2.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 401 SGYGSAANSTQDGTAPSYGGPGGAG 475
           +GYG        G  PSYGG  G G
Sbjct: 233 NGYGGGQGGGNYGGGPSYGGGRGGG 257



 Score = 22.7 bits (47), Expect(2) = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 266 QGYGDSTYSQQSGGQ 310
           +GYGD+ Y+   GGQ
Sbjct: 225 RGYGDNGYNGYGGGQ 239

>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 11/96 (11%)
 Frame = +2

Query: 224 NNYNYSHPPASYASQG-YGDSTYSQQSGGQQ----------AXXXXXXXXXXXXXXXXXX 370
           N+Y+    P  Y S G YG S  SQ S GQQ          A                  
Sbjct: 64  NSYSTQSAPQGYGSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSGYG 123

Query: 371 XXXXXXXXXASGYGSAANSTQDGTAPSYGGPGGAGQ 478
                     SGYG    S   G   SY  P G GQ
Sbjct: 124 QPQGGGYGQQSGYGGQQQSY--GQQQSYNPPQGYGQ 157

>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9|
          Length = 556

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 197 TGTAAPADANNYNYSHPPASYASQGYGDSTYS 292
           TG  AP   NN  Y     SY+++ YG ++YS
Sbjct: 138 TGYNAPLQQNNNPYGSMNNSYSNKSYGSNSYS 169

>YKG7_CAEEL (P46557) Hypothetical protein B0285.7 precursor|
          Length = 781

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 46  PATLWQLPSSIWRVSDRVGSVFKP 117
           P    Q+P++ WRV   +GSVF+P
Sbjct: 278 PHVFKQIPTAKWRVPQMIGSVFEP 301

>SYHH_HUMAN (P49590) Histidyl-tRNA synthetase homolog (EC 6.1.1.21)|
           (Histidine--tRNA ligase homolog) (HisRS)
          Length = 506

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 146 QCQGGAAVIAGLKTDPTLSDTLQMLEG 66
           QC GG +++  +  DP LS   Q LEG
Sbjct: 273 QCHGGVSLVEQMFQDPRLSQNKQALEG 299

>CLPB_LACLC (O68185) Chaperone clpB|
          Length = 867

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 113 LKTDPTLSDTLQMLEG--SCHKVAGHTVVVHQDKLQAA 6
           L T+PT+ DT+ +L G   C ++  H V +H + L AA
Sbjct: 339 LVTEPTVEDTISILRGLKECFEI-HHGVTIHDNALVAA 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,201,309
Number of Sequences: 219361
Number of extensions: 890967
Number of successful extensions: 3359
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3347
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)