| Clone Name | baet99f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 791 Score = 297 bits (150), Expect = 1e-77 Identities = 275/317 (86%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcggagtccgcggcggcgacgcgctcaccgtcggccttcgtac 158 ||||| ||||||||| ||| || ||||||||||||||||||| || ||||||||||| | Sbjct: 116 tcctcgtcctcgccgaggccgaccccgcggcggcgacgcgctcgccttcggccttcgtgc 175 Query: 159 agaacgccatctactccaaccgcatcaccatcttctccaaatcctactgcccgtactgta 218 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| || Sbjct: 176 agaacgccatctactccaatcgcatcaccatcttctctaaaacctactgcccgtactcta 235 Query: 219 tgcgtgctaagggaatatttaaagacctcaatgaaaatccttacgttgttgaacttgatc 278 ||||||||||| | ||||||| ||| ||||| || |||||||| |||||||||| |||| Sbjct: 236 tgcgtgctaagcgtatatttagagatctcaaggagaatccttatattgttgaactagatc 295 Query: 279 tccgagaggatggccgagaaattcaaggtgttcttctagacctagttgggcgcaatactg 338 || |||||||||| ||||||||||| |||||||||||||| ||||||| || |||||| Sbjct: 296 tcagagaggatggtagagaaattcaaagtgttcttctagacttagttggccgtcatactg 355 Query: 339 tgccacaggtgntttgtaatggccatcacgttggtggctcagacgatacgaaaagtgctc 398 ||||||||||| | |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 356 tgccacaggtgttcgtgaatggccagcacgttggtggctcagatgatacagcaaatgctc 415 Query: 399 tttcgaatggacagctt 415 ||| |||||||||||| Sbjct: 416 attctaatggacagctt 432
>dbj|AK067828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120N01, full insert sequence Length = 790 Score = 297 bits (150), Expect = 1e-77 Identities = 275/317 (86%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcggagtccgcggcggcgacgcgctcaccgtcggccttcgtac 158 ||||| ||||||||| ||| || ||||||||||||||||||| || ||||||||||| | Sbjct: 115 tcctcgtcctcgccgaggccgaccccgcggcggcgacgcgctcgccttcggccttcgtgc 174 Query: 159 agaacgccatctactccaaccgcatcaccatcttctccaaatcctactgcccgtactgta 218 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| || Sbjct: 175 agaacgccatctactccaatcgcatcaccatcttctctaaaacctactgcccgtactcta 234 Query: 219 tgcgtgctaagggaatatttaaagacctcaatgaaaatccttacgttgttgaacttgatc 278 ||||||||||| | ||||||| ||| ||||| || |||||||| |||||||||| |||| Sbjct: 235 tgcgtgctaagcgtatatttagagatctcaaggagaatccttatattgttgaactagatc 294 Query: 279 tccgagaggatggccgagaaattcaaggtgttcttctagacctagttgggcgcaatactg 338 || |||||||||| ||||||||||| |||||||||||||| ||||||| || |||||| Sbjct: 295 tcagagaggatggtagagaaattcaaagtgttcttctagacttagttggccgtcatactg 354 Query: 339 tgccacaggtgntttgtaatggccatcacgttggtggctcagacgatacgaaaagtgctc 398 ||||||||||| | |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 355 tgccacaggtgttcgtgaatggccagcacgttggtggctcagatgatacagcaaatgctc 414 Query: 399 tttcgaatggacagctt 415 ||| |||||||||||| Sbjct: 415 attctaatggacagctt 431
>gb|BT016211.1| Zea mays clone Contig44 mRNA sequence Length = 705 Score = 204 bits (103), Expect = 2e-49 Identities = 258/310 (83%) Strand = Plus / Plus Query: 105 tcctcgccgtggcggagtccgcggcggcgacgcgctcaccgtcggccttcgtacagaacg 164 ||||||| | |||||||| |||||||| |||| | || |||||||| |||||||| |||| Sbjct: 27 tcctcgcagcggcggagttcgcggcggggacgaggtcgccgtcggctttcgtacaaaacg 86 Query: 165 ccatctactccaaccgcatcaccatcttctccaaatcctactgcccgtactgtatgcgtg 224 |||||||||||||||||||||||||||||||||| | |||||||| |||| ||||||| Sbjct: 87 ccatctactccaaccgcatcaccatcttctccaagacttactgcccctactccatgcgtg 146 Query: 225 ctaagggaatatttaaagacctcaatgaaaatccttacgttgttgaacttgatctccgag 284 ||||| |||||| |||||| || ||| |||| || ||||||||||| ||| ||||| Sbjct: 147 ctaagcacatatttcgagaccttaaggaagatccatatgttgttgaactagatacccgag 206 Query: 285 aggatggccgagaaattcaaggtgttcttctagacctagttgggcgcaatactgtgccac 344 |||||| || || |||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 207 tggatgggcgtgacattcaaagtgttctcctggacctagttgggcgtcgtactgtgccac 266 Query: 345 aggtgntttgtaatggccatcacgttggtggctcagacgatacgaaaagtgctctttcga 404 ||||| || ||||| || || ||||||||||||||||||| || ||| ||||| | Sbjct: 267 aggtgtttgtcaatggacagcatattggtggctcagacgatacagtaaatgcgctttcaa 326 Query: 405 atggacagct 414 |||||||||| Sbjct: 327 atggacagct 336
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcggagtccgcggcggcgacgcgctcaccgtcggccttcgtac 158 ||||| ||||||||| ||| || ||||||||||||||||||| || ||||||||||| | Sbjct: 26050136 tcctcgtcctcgccgaggccgaccccgcggcggcgacgcgctcgccttcggccttcgtgc 26050195 Query: 159 agaacgccatctactccaaccgcatcaccatcttctccaaatcctactgcccgta 213 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 26050196 agaacgccatctactccaatcgcatcaccatcttctctaaaacctactgcccgta 26050250 Score = 95.6 bits (48), Expect = 1e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 283 agaggatggccgagaaattcaaggtgttcttctagacctagttgggcgcaatactgtgcc 342 ||||||||| ||||||||||| |||||||||||||| ||||||| || |||||||||| Sbjct: 26051817 agaggatggtagagaaattcaaagtgttcttctagacttagttggccgtcatactgtgcc 26051876 Query: 343 acaggtgntttgtaatggccatcacgttggtggctcaga 381 ||||||| | |||||||| ||||||||||||||||| Sbjct: 26051877 acaggtgttcgtgaatggccagcacgttggtggctcaga 26051915 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 211 gtactgtatgcgtgctaagggaatatttaaagacctcaatgaaaatccttacgttgttga 270 ||||| ||||||||||||| | ||||||| ||| ||||| || |||||||| ||||||| Sbjct: 26051654 gtactctatgcgtgctaagcgtatatttagagatctcaaggagaatccttatattgttga 26051713 Query: 271 acttgatctc 280 ||| |||||| Sbjct: 26051714 actagatctc 26051723
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcggagtccgcggcggcgacgcgctcaccgtcggccttcgtac 158 ||||| ||||||||| ||| || ||||||||||||||||||| || ||||||||||| | Sbjct: 57582 tcctcgtcctcgccgaggccgaccccgcggcggcgacgcgctcgccttcggccttcgtgc 57641 Query: 159 agaacgccatctactccaaccgcatcaccatcttctccaaatcctactgcccgta 213 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 57642 agaacgccatctactccaatcgcatcaccatcttctctaaaacctactgcccgta 57696 Score = 95.6 bits (48), Expect = 1e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 283 agaggatggccgagaaattcaaggtgttcttctagacctagttgggcgcaatactgtgcc 342 ||||||||| ||||||||||| |||||||||||||| ||||||| || |||||||||| Sbjct: 59263 agaggatggtagagaaattcaaagtgttcttctagacttagttggccgtcatactgtgcc 59322 Query: 343 acaggtgntttgtaatggccatcacgttggtggctcaga 381 ||||||| | |||||||| ||||||||||||||||| Sbjct: 59323 acaggtgttcgtgaatggccagcacgttggtggctcaga 59361 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 211 gtactgtatgcgtgctaagggaatatttaaagacctcaatgaaaatccttacgttgttga 270 ||||| ||||||||||||| | ||||||| ||| ||||| || |||||||| ||||||| Sbjct: 59100 gtactctatgcgtgctaagcgtatatttagagatctcaaggagaatccttatattgttga 59159 Query: 271 acttgatctc 280 ||| |||||| Sbjct: 59160 actagatctc 59169
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcggagtccgcggcggcgacgcgctcaccgtcggccttcgtac 158 ||||| ||||||||| ||| || ||||||||||||||||||| || ||||||||||| | Sbjct: 114009 tcctcgtcctcgccgaggccgaccccgcggcggcgacgcgctcgccttcggccttcgtgc 114068 Query: 159 agaacgccatctactccaaccgcatcaccatcttctccaaatcctactgcccgta 213 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 114069 agaacgccatctactccaatcgcatcaccatcttctctaaaacctactgcccgta 114123 Score = 95.6 bits (48), Expect = 1e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 283 agaggatggccgagaaattcaaggtgttcttctagacctagttgggcgcaatactgtgcc 342 ||||||||| ||||||||||| |||||||||||||| ||||||| || |||||||||| Sbjct: 115690 agaggatggtagagaaattcaaagtgttcttctagacttagttggccgtcatactgtgcc 115749 Query: 343 acaggtgntttgtaatggccatcacgttggtggctcaga 381 ||||||| | |||||||| ||||||||||||||||| Sbjct: 115750 acaggtgttcgtgaatggccagcacgttggtggctcaga 115788 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 211 gtactgtatgcgtgctaagggaatatttaaagacctcaatgaaaatccttacgttgttga 270 ||||| ||||||||||||| | ||||||| ||| ||||| || |||||||| ||||||| Sbjct: 115527 gtactctatgcgtgctaagcgtatatttagagatctcaaggagaatccttatattgttga 115586 Query: 271 acttgatctc 280 ||| |||||| Sbjct: 115587 actagatctc 115596
>emb|CR955005.2| Medicago truncatula chromosome 5 clone mte1-58c24, COMPLETE SEQUENCE Length = 106497 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 161 aacgccatctactccaaccgcatcaccatcttctccaaatcctactgcccgtac 214 ||||| |||||||||||| | ||||||||||||||||||||||| ||||||||| Sbjct: 65321 aacgcaatctactccaacagaatcaccatcttctccaaatcctattgcccgtac 65268
>dbj|AP006643.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT34A19, TM0249, complete sequence Length = 111706 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 149 gccttcgtacagaacgccatctactccaaccgcatcaccatcttctccaaatcctactgc 208 |||||||| || |||| ||||||||||||| | ||| || |||||||||||||||| ||| Sbjct: 41124 gccttcgttcacaacgtcatctactccaacagaatcgccttcttctccaaatcctattgc 41065 Query: 209 ccgt 212 |||| Sbjct: 41064 ccgt 41061
>ref|NM_106386.3| Arabidopsis thaliana arsenate reductase (glutaredoxin)/ electron transporter/ thiol-disulfide exchange intermediate AT1G77370 mRNA, complete cds Length = 609 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgtactgtatgcg 222 ||||||||||||||||||||||||||| ||| |||| Sbjct: 210 catcttctccaaatcctactgcccgtattgtttgcg 245
>gb|AY096542.1| Arabidopsis thaliana putative glutaredoxin protein (At1g77370) mRNA, complete cds Length = 424 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgtactgtatgcg 222 ||||||||||||||||||||||||||| ||| |||| Sbjct: 141 catcttctccaaatcctactgcccgtattgtttgcg 176
>gb|AY065377.1| Arabidopsis thaliana putative glutaredoxin protein (At1g77370) mRNA, complete cds Length = 663 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgtactgtatgcg 222 ||||||||||||||||||||||||||| ||| |||| Sbjct: 209 catcttctccaaatcctactgcccgtattgtttgcg 244
>emb|BX817543.1|CNS0ACE3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZH12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 529 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgtactgtatgcg 222 ||||||||||||||||||||||||||| ||| |||| Sbjct: 159 catcttctccaaatcctactgcccgtattgtttgcg 194
>emb|BX818011.1|CNS0AB3J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL56ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgtactgtatgcg 222 ||||||||||||||||||||||||||| ||| |||| Sbjct: 192 catcttctccaaatcctactgcccgtattgtttgcg 227
>gb|AC078898.5|AC078898 Arabidopsis thaliana chromosome 1 BAC F2P24 genomic sequence, complete sequence Length = 46855 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgta 213 ||||||||||||||||||||||||||| Sbjct: 24471 catcttctccaaatcctactgcccgta 24497
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgta 213 ||||||||||||||||||||||| Sbjct: 41741 ttctccaaatcctactgcccgta 41763
>ref|NM_122057.2| Arabidopsis thaliana arsenate reductase (glutaredoxin)/ electron transporter/ thiol-disulfide exchange intermediate AT5G20500 mRNA, complete cds Length = 1064 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 193 ttctccaaatcctactgcccctactg 218
>ref|NM_192611.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 gtcctcctcctcgccgtggcgg 119 |||||||||||||||||||||| Sbjct: 28 gtcctcctcctcgccgtggcgg 49
>gb|BT025498.1| Arabidopsis thaliana At5g20500 mRNA, complete cds Length = 408 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 139 ttctccaaatcctactgcccctactg 164
>emb|AJ271472.1|ATH271472 Arabidopsis thaliana mRNA for glutaredoxin (glu1 gene) Length = 629 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 186 ttctccaaatcctactgcccctactg 211
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 gtcctcctcctcgccgtggcgg 119 |||||||||||||||||||||| Sbjct: 23308620 gtcctcctcctcgccgtggcgg 23308599 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcgg 119 ||||||||||||||||||||| Sbjct: 32455395 tcctcctcctcgccgtggcgg 32455415
>ref|XM_624956.1| PREDICTED: Apis mellifera similar to WOC protein (LOC552580), mRNA Length = 4170 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 gtgctaagggaatatttaaaga 243 |||||||||||||||||||||| Sbjct: 2543 gtgctaagggaatatttaaaga 2564
>emb|BX833137.1|CNS0A1T6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 149 ttctccaaatcctactgcccctactg 174
>emb|BX830007.1|CNS0A08L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 619 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 167 ttctccaaatcctactgcccctactg 192
>emb|BX833168.1|CNS09Z8N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZD04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 592 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 165 ttctccaaatcctactgcccctactg 190
>gb|AY084705.1| Arabidopsis thaliana clone 115597 mRNA, complete sequence Length = 618 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 192 ttctccaaatcctactgcccctactg 217
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 gtcctcctcctcgccgtggcgg 119 |||||||||||||||||||||| Sbjct: 34318 gtcctcctcctcgccgtggcgg 34297
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 gtcctcctcctcgccgtggcgg 119 |||||||||||||||||||||| Sbjct: 95362 gtcctcctcctcgccgtggcgg 95341
>dbj|AK070921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074J04, full insert sequence Length = 1015 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 gtcctcctcctcgccgtggcgg 119 |||||||||||||||||||||| Sbjct: 74 gtcctcctcctcgccgtggcgg 95
>gb|BT002008.1| Arabidopsis thaliana glutaredoxin (At5g20500) mRNA, complete cds Length = 618 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 192 ttctccaaatcctactgcccctactg 217
>gb|BT002005.1| Arabidopsis thaliana glutaredoxin (At5g20500) mRNA, complete cds Length = 618 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ttctccaaatcctactgcccgtactg 216 |||||||||||||||||||| ||||| Sbjct: 192 ttctccaaatcctactgcccctactg 217
>gb|AY104419.1| Zea mays PCO109791 mRNA sequence Length = 761 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 catcttctccaaatcctactgcccgtactg 216 |||||||||||| || |||||||||||||| Sbjct: 239 catcttctccaagtcatactgcccgtactg 268
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 ccgtggcggagtccgcggcggcgacg 136 |||||||||||| ||||||||||||| Sbjct: 14055 ccgtggcggagttcgcggcggcgacg 14080
>gb|AF053565.1|AF053565 Mesembryanthemum crystallinum glutaredoxin I mRNA, complete cds Length = 698 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 161 aacgccatctactccaaccgcatcaccatcttctccaaatcctactgccc 210 |||| ||||||||||||||| || | | |||||||||||||||||||| Sbjct: 186 aacgtcatctactccaaccgaattgcagttttctccaaatcctactgccc 235
>ref|NM_191406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2691 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcgg 119 ||||||||||||||||||||| Sbjct: 32 tcctcctcctcgccgtggcgg 52
>ref|XM_473523.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ggtcctcctcctcgccgtggc 117 ||||||||||||||||||||| Sbjct: 207 ggtcctcctcctcgccgtggc 227
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 cggcggcgacgcgctcaccgt 146 ||||||||||||||||||||| Sbjct: 11835 cggcggcgacgcgctcaccgt 11815
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 ggtcctcctcctcgccgtggc 117 ||||||||||||||||||||| Sbjct: 28316224 ggtcctcctcctcgccgtggc 28316204
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcgg 119 ||||||||||||||||||||| Sbjct: 42916 tcctcctcctcgccgtggcgg 42936
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcgg 119 ||||||||||||||||||||| Sbjct: 134892 tcctcctcctcgccgtggcgg 134912
>dbj|AB019788.1| Cynops pyrrhogaster CpTbx3 premature mRNA, partial cds Length = 5170 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 25 ctcggcggctgcgctgccctgtcacctcgagca 57 ||||| |||||||||||||| ||||||| |||| Sbjct: 1622 ctcggtggctgcgctgccctttcacctccagca 1654
>dbj|AK105902.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F10, full insert sequence Length = 1500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ggtcctcctcctcgccgtggc 117 ||||||||||||||||||||| Sbjct: 322 ggtcctcctcctcgccgtggc 342
>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full insert sequence Length = 3155 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tcctcctcctcgccgtggcgg 119 ||||||||||||||||||||| Sbjct: 262 tcctcctcctcgccgtggcgg 282
>dbj|AK071118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082L01, full insert sequence Length = 1514 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ggtcctcctcctcgccgtggc 117 ||||||||||||||||||||| Sbjct: 320 ggtcctcctcctcgccgtggc 340
>dbj|AK058888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C11, full insert sequence Length = 1405 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ggtcctcctcctcgccgtggc 117 ||||||||||||||||||||| Sbjct: 317 ggtcctcctcctcgccgtggc 337
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 ggtcctcctcctcgccgtggc 117 ||||||||||||||||||||| Sbjct: 108532 ggtcctcctcctcgccgtggc 108512
>ref|XM_513525.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ13511 (LOC456983), mRNA Length = 3777 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 accatcttctccaaatccta 204 |||||||||||||||||||| Sbjct: 1770 accatcttctccaaatccta 1789
>gb|AC115869.9| Mus musculus chromosome 1, clone RP24-330M24, complete sequence Length = 158656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 atcttctccaaatcctactg 207 |||||||||||||||||||| Sbjct: 137499 atcttctccaaatcctactg 137480
>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence Length = 163517 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 129211 cctcctcctcgccgtggcgg 129230
>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence Length = 193320 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 156748 cctcctcctcgccgtggcgg 156729
>gb|BT015239.1| Drosophila melanogaster RE02133 full insert cDNA Length = 4742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 2981 cctcctcctcgccgtggcgg 2962
>ref|XM_656727.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4215.2), mRNA Length = 309 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 tcttctccaaatcctactgcccgtactg 216 |||||||||| ||||||||||| ||||| Sbjct: 56 tcttctccaagtcctactgcccctactg 83
>ref|XM_745266.1| Aspergillus fumigatus Af293 glutaredoxin (Afu1g06100) partial mRNA Length = 309 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 tcttctccaaatcctactgcccgtactg 216 ||||||| |||||||||||||| ||||| Sbjct: 56 tcttctcgaaatcctactgcccctactg 83
>ref|XM_534148.2| PREDICTED: Canis familiaris similar to LIM domain only protein 7 (LOMP) (F-box only protein 20) (LOC476948), mRNA Length = 5525 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tttctttggtcctcctcctc 109 |||||||||||||||||||| Sbjct: 3779 tttctttggtcctcctcctc 3760
>emb|AL603750.7| Human DNA sequence from clone RP11-33E12 on chromosome 1 Contains a novel gene (FLJ13815) and a CpG island, complete sequence Length = 63692 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 accatcttctccaaatccta 204 |||||||||||||||||||| Sbjct: 42479 accatcttctccaaatccta 42460
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 ccgcggcggcgacgcgctcaccgtcggc 150 ||||||||||| |||||||| ||||||| Sbjct: 2733812 ccgcggcggcgtcgcgctcagcgtcggc 2733839 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cggcgacgcgctcaccgtcg 148 |||||||||||||||||||| Sbjct: 1905754 cggcgacgcgctcaccgtcg 1905773
>emb|CR293525.10| Zebrafish DNA sequence from clone CH211-142B9 in linkage group 12, complete sequence Length = 155553 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tttaaagacctcaatgaaaatcct 259 |||||||||| ||||||||||||| Sbjct: 71669 tttaaagaccacaatgaaaatcct 71646
>dbj|AK023877.1| Homo sapiens cDNA FLJ13815 fis, clone THYRO1000381 Length = 1801 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 accatcttctccaaatccta 204 |||||||||||||||||||| Sbjct: 1377 accatcttctccaaatccta 1396
>ref|NM_001038883.1| Drosophila melanogaster CG33988-RA (CG33988), mRNA Length = 4726 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 2981 cctcctcctcgccgtggcgg 2962
>ref|XM_936457.1| PREDICTED: Homo sapiens synapse defective 1, Rho GTPase, homolog 2 (C. elegans) (SYDE2), mRNA Length = 4218 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 accatcttctccaaatccta 204 |||||||||||||||||||| Sbjct: 2082 accatcttctccaaatccta 2101
>ref|XM_086186.6| PREDICTED: Homo sapiens synapse defective 1, Rho GTPase, homolog 2 (C. elegans) (SYDE2), mRNA Length = 4218 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 accatcttctccaaatccta 204 |||||||||||||||||||| Sbjct: 2082 accatcttctccaaatccta 2101
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aaattcaaggtgttcttcta 316 |||||||||||||||||||| Sbjct: 1444535 aaattcaaggtgttcttcta 1444516
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ccgaagtcgcgctcggcggc 33 |||||||||||||||||||| Sbjct: 2611480 ccgaagtcgcgctcggcggc 2611499
>gb|AC153628.3| Mus musculus 6 BAC RP23-13B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219322 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tttaaagacctcaatgaaaa 255 |||||||||||||||||||| Sbjct: 192278 tttaaagacctcaatgaaaa 192297
>gb|AC156954.5| Mus musculus 6 BAC RP24-343M7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179140 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tttaaagacctcaatgaaaa 255 |||||||||||||||||||| Sbjct: 59052 tttaaagacctcaatgaaaa 59071
>gb|BT022875.1| Drosophila melanogaster IP12847 full insert cDNA Length = 3197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 1445 cctcctcctcgccgtggcgg 1426
>gb|BT022839.1| Drosophila melanogaster IP12947 full insert cDNA Length = 3197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 1445 cctcctcctcgccgtggcgg 1426
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone BACR03B07, complete sequence Length = 170089 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 51262 cctcctcctcgccgtggcgg 51281
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ctttggtcctcctcctcgcc 112 |||||||||||||||||||| Sbjct: 810654 ctttggtcctcctcctcgcc 810635
>emb|AL833789.20| Zebrafish DNA sequence from clone DKEY-69O7 in linkage group 12, complete sequence Length = 175664 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tttaaagacctcaatgaaaatcct 259 |||||||||| ||||||||||||| Sbjct: 83908 tttaaagaccacaatgaaaatcct 83885
>ref|XM_316489.2| Anopheles gambiae str. PEST ENSANGP00000013496 (ENSANGG00000011007), partial mRNA Length = 2601 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tcctcctcgccgtggcggag 121 |||||||||||||||||||| Sbjct: 1949 tcctcctcgccgtggcggag 1968
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctcctcctcgccgtggcgg 119 |||||||||||||||||||| Sbjct: 13415 cctcctcctcgccgtggcgg 13434
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cggcggcgacgcgctcaccg 145 |||||||||||||||||||| Sbjct: 1077723 cggcggcgacgcgctcaccg 1077704
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ctttggtcctcctcctcgcc 112 |||||||||||||||||||| Sbjct: 481734 ctttggtcctcctcctcgcc 481715
>emb|AL844865.6| Mouse DNA sequence from clone RP23-350L23 on chromosome 2, complete sequence Length = 197785 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccatcttctccaaatcctac 205 |||||||||||||||||||| Sbjct: 139987 ccatcttctccaaatcctac 139968
>emb|AL834286.1|HSM805322 Homo sapiens mRNA; cDNA DKFZp667B2411 (from clone DKFZp667B2411) Length = 3017 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 accatcttctccaaatccta 204 |||||||||||||||||||| Sbjct: 1008 accatcttctccaaatccta 1027 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,648,972 Number of Sequences: 3902068 Number of extensions: 3648972 Number of successful extensions: 67587 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66749 Number of HSP's gapped (non-prelim): 831 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)