ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet99e06 |
|---|---|
| Clone Library Name | barley_pub |
>ODPB_ARATH (Q38799) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 363 Score = 144 bits (364), Expect = 7e-35 Identities = 73/103 (70%), Positives = 84/103 (81%) Frame = +2 Query: 134 MLGAARRSGCVLGQLMQTLRPAATAARSYSATPKEMTVREALNSALDEEMSADPSVFLMG 313 MLG R+ ++ R A +ARSY+A KEMTVR+ALNSA+DEEMSADP VF+MG Sbjct: 1 MLGILRQRAIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMG 60 Query: 314 EEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 EEVG+YQGAYKITKGLL+KYGP+RV DTPITEAGFTGIGVGAA Sbjct: 61 EEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAA 103
>ODPB_PEA (P52904) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 359 Score = 136 bits (342), Expect = 3e-32 Identities = 68/87 (78%), Positives = 79/87 (90%) Frame = +2 Query: 182 QTLRPAATAARSYSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGL 361 +T+RP+ +A R +S+ K+MTVR+ALNSALD EMSAD VFLMGEEVGEYQGAYK+TKGL Sbjct: 8 KTIRPSFSAFRFFSSA-KQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGL 66 Query: 362 LDKYGPDRVLDTPITEAGFTGIGVGAA 442 L+KYGP+RVLDTPITEAGFTGIGVGAA Sbjct: 67 LEKYGPERVLDTPITEAGFTGIGVGAA 93
>ODPB_SCHPO (Q09171) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 366 Score = 112 bits (279), Expect = 5e-25 Identities = 57/98 (58%), Positives = 75/98 (76%), Gaps = 7/98 (7%) Frame = +2 Query: 170 GQLMQTLRP----AATAARSYSATP---KEMTVREALNSALDEEMSADPSVFLMGEEVGE 328 G+++ T R ++T A+ YS++ KEMTVR+ALNSA++EEM D VFL+GEEV + Sbjct: 8 GEIVGTSRSWKLLSSTIAKRYSSSSNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQ 67 Query: 329 YQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 Y GAYKI++GLLDK+GP RV+DTPITE GFTG+ GAA Sbjct: 68 YNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAA 105
>ODPB_YEAST (P32473) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 366 Score = 109 bits (272), Expect = 3e-24 Identities = 53/85 (62%), Positives = 67/85 (78%) Frame = +2 Query: 188 LRPAATAARSYSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLD 367 +RP+A AA ++ K MTVREALNSA+ EE+ D VFL+GEEV +Y GAYK++KGLLD Sbjct: 22 VRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLD 81 Query: 368 KYGPDRVLDTPITEAGFTGIGVGAA 442 ++G RV+DTPITE GFTG+ VGAA Sbjct: 82 RFGERRVVDTPITEYGFTGLAVGAA 106
>ODPB_RHIME (Q9R9N4) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 460 Score = 99.4 bits (246), Expect = 4e-21 Identities = 55/108 (50%), Positives = 67/108 (62%), Gaps = 21/108 (19%) Frame = +2 Query: 182 QTLRPAATAARSYSATP---------------------KEMTVREALNSALDEEMSADPS 298 +T +PAA A + SA P MTVREAL A+ EEM A+ Sbjct: 98 ETPKPAAAEAPAASAAPVAAQPKADVPSDPAIPAGTEMATMTVREALRDAMAEEMRANED 157 Query: 299 VFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 VF+MGEEV EYQGAYK+T+GLL ++G RV+DTPITE GF G+GVGAA Sbjct: 158 VFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAA 205
>ODPB_CAEEL (O44451) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) Length = 352 Score = 99.0 bits (245), Expect = 5e-21 Identities = 52/84 (61%), Positives = 61/84 (72%) Frame = +2 Query: 191 RPAATAARSYSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDK 370 R A T+ R+ S MTVR+ALN A+DEE+ D VFLMGEEV +Y GAYKI+KGL K Sbjct: 13 RLAGTSTRAAST----MTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKK 68 Query: 371 YGPDRVLDTPITEAGFTGIGVGAA 442 +G RV+DTPITE GF GI VGAA Sbjct: 69 HGDKRVVDTPITEMGFAGIAVGAA 92
>ODPB_RICCN (Q92IS2) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 326 Score = 98.6 bits (244), Expect = 6e-21 Identities = 45/69 (65%), Positives = 57/69 (82%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 ++TVREAL A+ EEM D VF++GEEV EYQGAYK+T+GLL+++GP RV+DTPITE G Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61 Query: 416 FTGIGVGAA 442 F G+ VGAA Sbjct: 62 FAGLAVGAA 70
>ODPB_RAT (P49432) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 359 Score = 96.3 bits (238), Expect = 3e-20 Identities = 49/107 (45%), Positives = 66/107 (61%) Frame = +2 Query: 122 IASTMLGAARRSGCVLGQLMQTLRPAATAARSYSATPKEMTVREALNSALDEEMSADPSV 301 +A + G R +L +L PAA ++TVREA+N +DEE+ D V Sbjct: 4 VAGLVRGLCGRLSGLLKRLFHCSAPAAV----------QLTVREAINQGMDEELERDEKV 53 Query: 302 FLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 FL+GEEV +Y GAYK+++GL KYG R++DTPI+E GF GI VGAA Sbjct: 54 FLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAA 100
>ODPB_MOUSE (Q9D051) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 359 Score = 95.9 bits (237), Expect = 4e-20 Identities = 48/107 (44%), Positives = 67/107 (62%) Frame = +2 Query: 122 IASTMLGAARRSGCVLGQLMQTLRPAATAARSYSATPKEMTVREALNSALDEEMSADPSV 301 +A + G R++ +L + PAA ++TVREA+N +DEE+ D V Sbjct: 4 VAGLVRGPLRQASGLLKRRFHRSAPAAV----------QLTVREAINQGMDEELERDEKV 53 Query: 302 FLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 FL+GEEV +Y GAYK+++GL KYG R++DTPI+E GF GI VGAA Sbjct: 54 FLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAA 100
>ODPB_RICPR (Q9ZDR3) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 326 Score = 95.5 bits (236), Expect = 5e-20 Identities = 44/69 (63%), Positives = 56/69 (81%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 ++TVREAL A+ EEM D VF++GEEV EYQGAYK+T+GLL+++G RV+DTPITE G Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYG 61 Query: 416 FTGIGVGAA 442 F G+ VGAA Sbjct: 62 FAGLAVGAA 70
>ODPB_ZYMMO (O66113) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 462 Score = 95.1 bits (235), Expect = 7e-20 Identities = 45/69 (65%), Positives = 56/69 (81%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 + T+REAL A+ EEM D VF+MGEEV EYQGAYK+T+GLL ++G RV+DTPI+E G Sbjct: 138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYG 197 Query: 416 FTGIGVGAA 442 F+GIGVGAA Sbjct: 198 FSGIGVGAA 206
>ODPB_HUMAN (P11177) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 359 Score = 92.4 bits (228), Expect = 4e-19 Identities = 40/69 (57%), Positives = 54/69 (78%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 ++TVR+A+N +DEE+ D VFL+GEEV +Y GAYK+++GL KYG R++DTPI+E G Sbjct: 32 QVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMG 91 Query: 416 FTGIGVGAA 442 F GI VGAA Sbjct: 92 FAGIAVGAA 100
>ODPB_ASCSU (P26269) Pyruvate dehydrogenase E1 component subunit beta,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) Length = 361 Score = 91.3 bits (225), Expect = 1e-18 Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 7/95 (7%) Frame = +2 Query: 179 MQTLRPAATAA-------RSYSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQG 337 M+ LR T+A R ++ +TVR+ALN+ALDEE+ D VFL+GEEV +Y G Sbjct: 7 MRLLRNGLTSACALEQSVRRLASGTLNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDG 66 Query: 338 AYKITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 AYKI+KGL KYG R+ DTPITE G+ VGAA Sbjct: 67 AYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAA 101
>ODPB_MESVI (Q9MUR4) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 327 Score = 79.3 bits (194), Expect = 4e-15 Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 3/71 (4%) Frame = +2 Query: 239 MTVR---EALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITE 409 MTVR EALN A+DEEM+ + V L+GE++G Y G+YK+T+ L KYG RV+DTPI E Sbjct: 1 MTVRFLFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAE 60 Query: 410 AGFTGIGVGAA 442 F G +GAA Sbjct: 61 NSFVGAAIGAA 71
>ODPB_PORPU (P51266) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 331 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/64 (57%), Positives = 47/64 (73%) Frame = +2 Query: 251 EALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIG 430 +AL +A DEEM D +V ++GE+VG Y G+YK+TK L KYG RVLDTPI E FTG+ Sbjct: 8 DALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMA 67 Query: 431 VGAA 442 +GAA Sbjct: 68 IGAA 71
>ODBB_BACSU (P37941) 2-oxoisovalerate dehydrogenase beta subunit (EC 1.2.4.4)| (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) Length = 327 Score = 72.8 bits (177), Expect = 4e-13 Identities = 31/68 (45%), Positives = 48/68 (70%) Frame = +2 Query: 239 MTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGF 418 M+ +A+N A+ EEM D VF++GE+VG G +K T GL +++G +RV+DTP+ E+ Sbjct: 4 MSYIDAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAI 63 Query: 419 TGIGVGAA 442 G+G+GAA Sbjct: 64 AGVGIGAA 71
>ODPB_MYCPN (P75391) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 327 Score = 67.8 bits (164), Expect = 1e-11 Identities = 33/64 (51%), Positives = 42/64 (65%) Frame = +2 Query: 251 EALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIG 430 EAL +A+D + DP+V L G++ G G ++ TKGL KYG +RV D PI EA GIG Sbjct: 11 EALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIG 70 Query: 431 VGAA 442 VGAA Sbjct: 71 VGAA 74
>ODBB_HUMAN (P21953) 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial| precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) Length = 392 Score = 67.4 bits (163), Expect = 1e-11 Identities = 33/77 (42%), Positives = 48/77 (62%) Frame = +2 Query: 212 RSYSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVL 391 R Y T K M + +++ SALD ++ DP+ + GE+V + G ++ T GL DKYG DRV Sbjct: 63 REYGQTQK-MNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVF 120 Query: 392 DTPITEAGFTGIGVGAA 442 +TP+ E G G G+G A Sbjct: 121 NTPLCEQGIVGFGIGIA 137
>ODPB_STAES (Q8CPN2) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.4 bits (163), Expect = 1e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLALGLA 71
>ODPB_STAEQ (Q5HQ75) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.4 bits (163), Expect = 1e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLALGLA 71
>ODPB_LEIXX (Q6ABX8) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 337 Score = 67.0 bits (162), Expect = 2e-11 Identities = 28/64 (43%), Positives = 44/64 (68%) Frame = +2 Query: 251 EALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIG 430 +ALN+ L + + ADP V ++GE+VG G +++T+GL ++G RV+DTP+ EAG G Sbjct: 21 KALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTA 80 Query: 431 VGAA 442 +G A Sbjct: 81 IGLA 84
>ODPB_STAAW (P0A0A2) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODPB_STAAU (P0A0A3) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODPB_STAAS (Q6GAC0) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODPB_STAAR (Q6GHZ1) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODPB_STAAN (P99063) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODPB_STAAM (P0A0A1) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODPB_STAAC (Q5HGZ0) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 325 Score = 67.0 bits (162), Expect = 2e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+N AL E+ D V + GE+VG G +++T+GL ++G DRV DTP+ E+G Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 63 IGGLAMGLA 71
>ODBB_BOVIN (P21839) 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial| precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) Length = 392 Score = 66.6 bits (161), Expect = 3e-11 Identities = 33/75 (44%), Positives = 47/75 (62%) Frame = +2 Query: 218 YSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDT 397 Y T K M + +A+ SALD ++ DP+ + GE+V + G ++ T GL DKYG DRV +T Sbjct: 65 YGQTQK-MNLFQAVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNT 122 Query: 398 PITEAGFTGIGVGAA 442 P+ E G G G+G A Sbjct: 123 PLCEQGIVGFGIGIA 137
>ODPB_BACST (P21874) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 324 Score = 65.9 bits (159), Expect = 4e-11 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+ AL E+ DP+V + GE+VG G ++ T+GL ++G DRV DTP+ E+G Sbjct: 2 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESG 61 Query: 416 FTGIGVGAA 442 G+ +G A Sbjct: 62 IGGLAIGLA 70
>ODPB_ACHLA (P35488) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 327 Score = 65.5 bits (158), Expect = 6e-11 Identities = 30/68 (44%), Positives = 42/68 (61%) Frame = +2 Query: 239 MTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGF 418 +T+ EA+N A+D+ M D S+ + GE+ G G +++T GL KYG RV DTPI E+ Sbjct: 4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAI 63 Query: 419 TGIGVGAA 442 G VG A Sbjct: 64 VGSAVGMA 71
>ODPB_MYCGE (P47515) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 326 Score = 65.1 bits (157), Expect = 7e-11 Identities = 32/64 (50%), Positives = 41/64 (64%) Frame = +2 Query: 251 EALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGFTGIG 430 EALN+A+D + D +V L G++ G G ++ TKGL KYG +RV D PI E GIG Sbjct: 10 EALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIG 69 Query: 431 VGAA 442 VGAA Sbjct: 70 VGAA 73
>ACOB_RALEU (P27746) Acetoin:2,6-dichlorophenolindophenol oxidoreductase beta| subunit (EC 1.1.1.-) (Acetoin:DCPIP oxidoreductase-beta) (AO:DCPIP OR) (TPP-dependent acetoin dehydrogenase E1 beta-subunit) Length = 337 Score = 64.7 bits (156), Expect = 1e-10 Identities = 32/80 (40%), Positives = 55/80 (68%), Gaps = 10/80 (12%) Frame = +2 Query: 233 KEMTVREALNSALDEEMSADPSVFLMGEEV-------GE---YQGAYKITKGLLDKYGPD 382 ++++++ A+N A+D+EM+ DPSV ++GE++ GE + G +TKGL K+G D Sbjct: 2 RKLSIKLAINEAIDQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHG-D 60 Query: 383 RVLDTPITEAGFTGIGVGAA 442 R+LDTP++E+ + G +GAA Sbjct: 61 RLLDTPLSESAYVGAAIGAA 80
>ODBB_PSEPU (P09061) 2-oxoisovalerate dehydrogenase beta subunit (EC 1.2.4.4)| (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) Length = 339 Score = 63.5 bits (153), Expect = 2e-10 Identities = 29/66 (43%), Positives = 43/66 (65%) Frame = +2 Query: 239 MTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAGF 418 MT+ +AL SA+D + D +V + G++VG + G ++ T+GL KYG RV D PI+E+G Sbjct: 6 MTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGI 65 Query: 419 TGIGVG 436 G VG Sbjct: 66 VGTAVG 71
>ODPB_BACSU (P21882) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) (S complex, 36 kDa subunit) Length = 324 Score = 61.6 bits (148), Expect = 8e-10 Identities = 27/67 (40%), Positives = 44/67 (65%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTPITEAG 415 +MT+ +A+ AL E+ D +V + GE+VG G ++ T+GL ++G DRV DTP+ E+G Sbjct: 2 QMTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESG 61 Query: 416 FTGIGVG 436 G+ +G Sbjct: 62 IGGLALG 68
>ACOB_BACSU (O34591) Acetoin:2,6-dichlorophenolindophenol oxidoreductase beta| subunit (EC 1.1.1.-) (Acetoin:DCPIP oxidoreductase-beta) (AO:DCPIP OR) (TPP-dependent acetoin dehydrogenase E1 beta-subunit) Length = 341 Score = 54.3 bits (129), Expect = 1e-07 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 12/80 (15%) Frame = +2 Query: 239 MTVREALNSALDEEMSADPSVFLMGEEVG------------EYQGAYKITKGLLDKYGPD 382 +++ +A+N A+ M D +V L+GE+V + G +TKGL+ ++G Sbjct: 4 ISMSDAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEFGRT 63 Query: 383 RVLDTPITEAGFTGIGVGAA 442 RVLDTPI+EAG+ G + AA Sbjct: 64 RVLDTPISEAGYMGAAMAAA 83
>ODBB_RAT (P35738) 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial| precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) (Fragment) Length = 369 Score = 40.0 bits (92), Expect = 0.003 Identities = 23/75 (30%), Positives = 36/75 (48%) Frame = +2 Query: 218 YSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDT 397 Y T K M + +++ SALD ++ DP+ + GE+V + GA + L Sbjct: 42 YGQTQK-MNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGASDVLLAYETNMEKTECLTP 99 Query: 398 PITEAGFTGIGVGAA 442 P+ E G G G+G A Sbjct: 100 PLCEQGIVGFGIGIA 114
>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4| precursor (LTBP-4) Length = 1666 Score = 36.6 bits (83), Expect = 0.028 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFPGA-----RTSPPNPIPVGSRSRRRCWAPRGDPDAC 167 T P ++ +A +PS PA P A R SPP PV S RR C+ PDAC Sbjct: 1183 TFPGSQPQAPASPSLPARPPAPPPPRRPSPPRQGPVSS-GRRECYFDTAAPDAC 1235
>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:| Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] Length = 676 Score = 33.5 bits (75), Expect = 0.24 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 10/54 (18%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPP----------NPIPVGSRSRRRCWAPRGDP 158 PP P P PA PGAR PP P P G + +++ P G P Sbjct: 395 PPGPPPPGPPPPGPAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPP 448 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P+G Sbjct: 227 PPGPPPPGPPPPGPAPPGAR-PPPGPPPLG 255 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 612 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 640 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 591 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 619 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 570 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 598 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 549 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 577 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 528 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 556 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 507 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 535 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 486 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 514 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 465 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 493 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 374 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 402 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 353 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 381 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 332 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 360 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 311 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 339 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 290 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 318 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 269 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 297 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 248 PPGPPPLGPPPPGPAPPGAR-PPPGPPPPG 276 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 206 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 234 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 185 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 213 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 164 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 192 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 143 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 171 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 122 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 150 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 101 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 129 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVG 116 PP P P PA PGAR PP P P G Sbjct: 80 PPGPPPPGPPPPGPAPPGAR-PPPGPPPPG 108 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSP-PNPIPVGSRSRRRCWAPRGDP 158 PP P P PA PGAR P P P P G R P G P Sbjct: 633 PPGPPPPGPPPPGPAPPGARPPPGPPPPPPGPSPPR---PPPGPP 674
>CI123_HUMAN (Q96GE9) Protein C9orf123| Length = 116 Score = 32.7 bits (73), Expect = 0.41 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = +3 Query: 18 ITNPPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSRRRCWAPR 149 IT PP A P+ PA PGA TSP R + CW+ R Sbjct: 13 ITAPPGTAAAPAKPAPPATPGAPTSPAE-----HRLLKTCWSCR 51
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 31.2 bits (69), Expect = 1.2 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFP-GARTSPPNPIPVGS 119 T PP P PS+P P G ++PP P+P S Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
>ODPB_BOVIN (P11966) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) (Fragment) Length = 24 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 236 EMTVREALNSALDEEMSADPSVF 304 ++TVREA+N +DEE+ D VF Sbjct: 2 QVTVREAINQGMDEELERDEKVF 24
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 30.8 bits (68), Expect = 1.6 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +3 Query: 15 LITNPPNKQKADPTPSSPAFPGARTSPPNPIP 110 L+ PP P PS PA+ A PP P P Sbjct: 538 LVLGPPAPPPPPPLPSGPAYASALPPPPGPPP 569
>Y746_CHLPN (Q9Z7F9) UPF0159 protein CPn_0746/CP1126/CPj0746/CpB0774| Length = 531 Score = 30.8 bits (68), Expect = 1.6 Identities = 21/63 (33%), Positives = 27/63 (42%) Frame = +2 Query: 206 AARSYSATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDR 385 A Y KE A + EEMS+ PSV L+ G+ G YK+ G L Y Sbjct: 280 AMMQYRRALKEQLKGLAEQATFSEEMSSSPSVQLV---YGDPDGIYKVAAGFLFPYSNRS 336 Query: 386 VLD 394 + D Sbjct: 337 LTD 339
>EXTL1_HUMAN (Q92935) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 676 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIP 110 P KQ+ + P +P PG R PP P P Sbjct: 605 PYGKQRQEAAPLAPGGPGPRPKPPAPAP 632
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +3 Query: 27 PPNKQKADPTPS--SPAFPGARTSPPNPIPVG 116 PP++Q PTP+ P P SPP+P P G Sbjct: 583 PPHRQPRPPTPTYGQPPSPPTTYSPPSPPPYG 614
>LIPS_HUMAN (Q05469) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1076 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNP 104 PP +Q+A+ TP++ A PGA+ P P Sbjct: 147 PPAQQEAESTPAAQAKPGAKREPSAP 172
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFPGARTSPPNPIPVGS 119 TNP +P+ +SPAFP + TS P+ P + Sbjct: 370 TNPAPSTFPNPSVASPAFPNSSTSNPSTAPASA 402
>MMP21_HUMAN (Q8N119) Matrix metalloproteinase-21 precursor (EC 3.4.24.-)| (MMP-21) Length = 569 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 10/53 (18%) Frame = +3 Query: 33 NKQKADPTPSSPAFPGARTSPPNPIPVGSRSRR----------RCWAPRGDPD 161 N+ + P P A SPP P P +RSRR R W PRG PD Sbjct: 113 NRPRCGVPDMRPPPPSAPPSPPGP-PPRARSRRSPRAPLSLSRRGWQPRGYPD 164
>OI106_HUMAN (Q9UPV9) 106 kDa O-GlcNAc transferase-interacting protein| (Trafficking protein, kinesin-binding 1) Length = 953 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 9 AILITNPPNKQKADPTPSSPAFPGARTSPP 98 A++ + PPN PT S P+F TSPP Sbjct: 776 AVIPSTPPNSPMQTPTSSPPSFEFKCTSPP 805
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 15 LITNPPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSR 128 + T+PP Q+ P PS P P T P P+P+ + R Sbjct: 567 ITTSPPVPQEPAPVPSPPRAP---TPPSTPVPLPEKRR 601
>SORL_HUMAN (Q92673) Sortilin-related receptor precursor (Sorting| protein-related receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2214 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 Query: 66 PAFPGARTSPPNPIPVGSRSRRRCWAPRGDPDACWG 173 P F G SPP P PVGS RR + D C G Sbjct: 703 PEFSGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSG 738
>GR65_RAT (O35254) Golgi reassembly-stacking protein 1 (Golgi| reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi peripheral membrane protein p65) Length = 450 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFPGARTSPPNPIPVGS 119 T P ++ K P+ SSP P A+T PN P+G+ Sbjct: 202 TQPSSQYKKPPSASSPGTP-AKTPQPNAFPLGA 233
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Frame = +3 Query: 51 PTPSSPAFPGARTSPPN--PIPVGSRS----RRRCWAPR 149 P P P P AR +PP P P G+RS R R W+ R Sbjct: 1108 PPPPRPVAPPARPAPPQRPPPPSGARSPAPARERVWSTR 1146
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +3 Query: 27 PPNKQKADPTP-SSPAFPGARTSPPNPIPVGSRSR 128 PP K P P SPA+P AR PP P P R R Sbjct: 901 PPAKPPPPPQPLPSPAYPAARP-PPGPAPFVPRER 934
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +3 Query: 27 PPNKQKADPTP-SSPAFPGARTSPPNPIPVGSRSR 128 PP K P P SPA+P AR PP P P R R Sbjct: 901 PPAKPPPPPQPLPSPAYPAARP-PPGPAPFVPRER 934
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 57 PSSPAFPGARTSPPNPIPVGSRSRRRCWAPRGDPDA 164 P +P PG + SP P P G R P+G+P A Sbjct: 1316 PGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGA 1351
>EGR1_MOUSE (P08046) Early growth response protein 1 (EGR-1) (Krox-24 protein)| (Transcription factor Zif268) (Nerve growth factor-induced protein A) (NGFI-A) Length = 533 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 6 GAILITNPPNKQKADPTPSSPAFPGARTSPP 98 G + +TNPP + P+P++ + A SPP Sbjct: 157 GLVSMTNPPTSSSSAPSPAASSSSSASQSPP 187
>SORL_MOUSE (O88307) Sortilin-related receptor precursor (Sorting| protein-related receptor containing LDLR class A repeats) (mSorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2215 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 Query: 66 PAFPGARTSPPNPIPVGSRSRRRCWAPRGDPDACWG 173 P F G SPP P PVGS RR + D C G Sbjct: 703 PEFSGKPYSPPVPCPVGSSYRRTRGYRKISGDTCSG 738
>EGR1_RAT (P08154) Early growth response protein 1 (EGR-1) (Krox-24 protein)| (Transcription factor Zif268) (Nerve growth factor-induced protein A) (NGFI-A) Length = 508 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 6 GAILITNPPNKQKADPTPSSPAFPGARTSPP 98 G + +TNPP + P+P++ + A SPP Sbjct: 132 GLVSMTNPPTSSSSAPSPAASSSSSASQSPP 162
>IE68_HHV2 (P14379) Immediate-early protein IE4 (IE68) (Fragment)| Length = 197 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSRRRCWAP-----RGDPD 161 PP+ D TP++ A PP+P+P GSR RRR P G PD Sbjct: 5 PPDPPALDTTPANHA-------PPSPLP-GSRKRRRPVLPSSSESEGKPD 46
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 15 LITNPPNKQKADPTPSSP-AFPGARTSPPNPIPVGSRSRRRCWAPR 149 L P A + SSP A P +R+ P P+P + +R W PR Sbjct: 1172 LALGPRGPSPASSSSSSPPAHPRSRSDPGPPVPRLPQKQRAPWGPR 1217
>GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30; Core protein p10] Length = 536 Score = 29.3 bits (64), Expect = 4.5 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 16/64 (25%) Frame = +3 Query: 21 TNPPNKQKADPTPSS----------PAFPGARTSPPNPI------PVGSRSRRRCWAPRG 152 TNPP P PSS P +PG PP+ + P+ SR R R P Sbjct: 210 TNPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGLRTPAASPIASRLRERRENPAE 269 Query: 153 DPDA 164 + A Sbjct: 270 ESQA 273
>ADAM8_MOUSE (Q05910) ADAM 8 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 8) (Cell surface antigen MS2) (Macrophage cysteine-rich glycoprotein) (CD156 antigen) Length = 826 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFPGARTSPPNPIPV 113 TN P + P PA PGA +S P P+PV Sbjct: 730 TNQPPRPIVKPKRPPPAPPGAVSSSPLPVPV 760
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSRRRCW 140 P + ++ P S+P P AR PP P P R R W Sbjct: 110 PRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRAW 147
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 12/55 (21%) Frame = +3 Query: 6 GAILITNP-------PNKQKADPTPSSPAF-----PGARTSPPNPIPVGSRSRRR 134 G + + NP PN Q A P P++P P R +PP P P G + +R Sbjct: 204 GGVRLDNPFAVPTAVPNIQAAVPLPATPIKQPPRPPPPRPAPPRPAPPGQAAPQR 258
>ISPE_PSEAE (P42805) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 282 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -2 Query: 169 QHASGSPRGAQHRRRDRLPTGMGLGG 92 Q ASGSP+G RLP G G+GG Sbjct: 77 QEASGSPQGVDIWLDKRLPMGGGIGG 102
>VMP25_BORHE (P32779) Variable major outer membrane lipoprotein 25 precursor| Length = 362 Score = 29.3 bits (64), Expect = 4.5 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%) Frame = +2 Query: 170 GQLMQTLRPAATAARSYSATPKEMTVREALNSALDEEMSADPSVFLMG--EEVGEYQGAY 343 G + +R A A++ +T KE E+L D++ + + G E +GA+ Sbjct: 120 GPIAVAIRAAVDTAKTTLSTLKEHL--ESLKGIGDDDKVGEATSNQNGVAASTDELKGAF 177 Query: 344 KITKGLLDKYGPDRVLDTPITEAGFTGIGVGAA 442 K KG++D G + V +AG T + +G A Sbjct: 178 KALKGIVDTAGKEGVAK---PKAGDTAVKIGNA 207
>Y1354_MYCBO (P59972) Hypothetical protein Mb1354c| Length = 567 Score = 28.9 bits (63), Expect = 5.9 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Frame = +2 Query: 221 SATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQ-GAYKITKGLLDKYGPDRVLD 394 +ATP + VREALN ++S D VF G E+GE Q G ++ +GL ++ +RV D Sbjct: 279 TATPVRV-VREALNRVEQGDLSGDLVVF-DGTELGELQRGFNRMVEGLRER---ERVRD 332
>Y1320_MYCTU (Q10633) Hypothetical protein Rv1320c/MT1362| Length = 567 Score = 28.9 bits (63), Expect = 5.9 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Frame = +2 Query: 221 SATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQ-GAYKITKGLLDKYGPDRVLD 394 +ATP + VREALN ++S D VF G E+GE Q G ++ +GL ++ +RV D Sbjct: 279 TATPVRV-VREALNRVEQGDLSGDLVVF-DGTELGELQRGFNRMVEGLRER---ERVRD 332
>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6| (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3) Length = 1173 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 60 SSPAFPGARTSPPNPIPVGSRSRRRCWAPRGDPD 161 SSP+ PG+ PP+ G +RR + PR DPD Sbjct: 275 SSPSRPGSTAFPPHDGDSG--GQRRSFPPRTDPD 306
>MREC_ECOLI (P16926) Rod shape-determining protein mreC| Length = 367 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +3 Query: 45 ADPTPSSPAFPGARTSPPNPI-PVGSRSRRRCWAPR 149 A PTP PA A T+P P P +RS +R P+ Sbjct: 319 AQPTPQQPATGNAATAPAAPTQPAANRSPQRATPPQ 354
>SORL_CHICK (Q98930) Sortilin-related receptor (Sorting protein-related| receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) ( Length = 1592 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +3 Query: 66 PAFPGARTSPPNPIPVGSRSRRRCWAPRGDPDACWG 173 P F G PP P PVGS RR + D C G Sbjct: 610 PEFAGKPYDPPVPCPVGSTYRRTRGYRKISGDTCMG 645
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSRRRCWAPRGDP 158 PP+ P PS P P T P+P P S S +P P Sbjct: 322 PPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSP 365
>MAK_MOUSE (Q04859) Serine/threonine-protein kinase MAK (EC 2.7.11.22) (Male| germ cell-associated kinase) (Protein kinase RCK) Length = 622 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +3 Query: 18 ITNPPNKQKADPTPSSPAFPG-ARTSPPNPI-PVGSRSRRRCW 140 +T+PP KQ+ P FP +T P N + +G + RR W Sbjct: 354 VTHPPPKQQGHQKPPQTMFPSIIKTIPVNSVSALGHKGARRRW 396
>GALT5_MOUSE (Q8C102) Polypeptide N-acetylgalactosaminyltransferase 5 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 5) (Polypeptide GalNAc transferase 5) (GalNAc-T5) (pp-GaNTase 5) Length = 930 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 Query: 362 ANPLLSCTHLDTLQPLLPLRKQKGRQTSPRQGRNSML 252 A PL HL TL +P++K +GR + P M+ Sbjct: 119 AVPLWHLAHLQTLPVTIPMQKTQGRDSKPEVSSQYMM 155
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFPGARTSPPNPI---PVGS 119 T PP A P P++ PG +T+PP P PVG+ Sbjct: 455 TPPPTSTHATPRPTT---PGPQTTPPGPATPGPVGA 487 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 9/52 (17%) Frame = +3 Query: 21 TNPPNKQKADPTPSSPAFPGART---------SPPNPIPVGSRSRRRCWAPR 149 T PP +A+ P P P R S PNP G R R RC P+ Sbjct: 205 TAPPQAARAEGGPCVPPVPAGRPWRSVPPVWYSAPNPGFRGLRFRERCLPPQ 256
>PTPA1_USTMA (Q4P4W3) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 487 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = -3 Query: 441 AAPTPMPVNPASVIGVSRTLSGPYLSSKPFVILYAP*YSPTSSPIKKTEGSADISSSRA 265 AA TP +PA+ + TL L + P + + A + +P+KK D+ + +A Sbjct: 13 AAATPTTSSPAASSSTTATLDSQSLCALPRIRVSASTLNSIVTPVKKITSETDVEAWKA 71
>SORL_RABIT (Q95209) Sortilin-related receptor precursor (Sorting| protein-related receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2213 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = +3 Query: 66 PAFPGARTSPPNPIPVGSRSRRRCWAPRGDPDACWG 173 P F G ++SPP P PVGS RR + D C G Sbjct: 703 PGFSG-KSSPPVPCPVGSTYRRSRGYRKISGDTCSG 737
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSRR--RCWAPRGDP 158 PP + P +P PGA PP+P P + R R + PRG P Sbjct: 1124 PPKEGVLGQVPLAPPQPGA---PPSPAPARFSTARGGRVFTPRGVP 1166
>CYSA_STRCO (Q59829) Putative cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 392 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = -2 Query: 166 HASGSPRGAQHRRRDRLPTGMGLG---GEVRAPGKAGEE 59 H G P G RD PT L GE+ APG+AG E Sbjct: 52 HLPGDPTGPYTYGRDENPTWTRLESAIGELEAPGEAGVE 90
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSR-RRCWAPRGDP 158 PP + P +P PGA PP+P P +R R + PRG P Sbjct: 1129 PPKEGTLTQVPLAPPPPGA---PPSPAPARFTARGGRVFTPRGVP 1170
>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1055 Score = 28.5 bits (62), Expect = 7.7 Identities = 22/74 (29%), Positives = 32/74 (43%) Frame = +2 Query: 221 SATPKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKITKGLLDKYGPDRVLDTP 400 S +PK++T N ++D EM + E G +GA KG P + LDTP Sbjct: 714 SQSPKKVTAETDFNKSVDFEMPPPSPPLNLHELSGPAEGASLTPKG----GNPTKGLDTP 769 Query: 401 ITEAGFTGIGVGAA 442 + + V AA Sbjct: 770 GKRSVDKAVSVEAA 783
>AGRN_RAT (P25304) Agrin precursor| Length = 1959 Score = 28.5 bits (62), Expect = 7.7 Identities = 9/27 (33%), Positives = 18/27 (66%) Frame = -3 Query: 435 PTPMPVNPASVIGVSRTLSGPYLSSKP 355 PTP+P++P + + + R+ + P L+ P Sbjct: 909 PTPLPISPHTTVSIPRSTAWPVLTVPP 935
>NAPE_ENTFA (P37062) NADH peroxidase (EC 1.11.1.1) (NPXase) (Npx)| Length = 447 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 12/71 (16%) Frame = +2 Query: 206 AARSYSATPKEMTVREALN------------SALDEEMSADPSVFLMGEEVGEYQGAYKI 349 AA +++ K++TV + L+ L EEM A+ GE V Y+G ++ Sbjct: 164 AAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRV 223 Query: 350 TKGLLDKYGPD 382 K + DK D Sbjct: 224 QKIVTDKNAYD 234
>GPSM3_HUMAN (Q9Y4H4) G-protein signaling modulator 3 (Activator of G-protein| signaling 4) (Protein G18) (G18.1b) Length = 160 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSR 122 PP ++ P P+S P R++PP+P P G+R Sbjct: 16 PPQDEEGWPPPNSTTRPW-RSAPPSPPPPGTR 46
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/46 (36%), Positives = 18/46 (39%) Frame = +3 Query: 27 PPNKQKADPTPSSPAFPGARTSPPNPIPVGSRSRRRCWAPRGDPDA 164 PP + P SP PGA SP P P G P G P A Sbjct: 220 PPGEAGPQGPPGSPGQPGADGSPGQPGPKGPN------GPDGQPGA 259
>CTDP1_MOUSE (Q7TSG2) RNA polymerase II subunit A C-terminal domain phosphatase| (EC 3.1.3.16) (TFIIF-associating CTD phosphatase) Length = 960 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +3 Query: 33 NKQKADPTPSSPAFPGARTSPPNPIP-VGSRSRRRCWAPRG 152 N+Q+ P P P PG R P +P G RS PRG Sbjct: 875 NEQERAPKPRKPRAPGIRREQPVGLPSSGERSTPGMRGPRG 915 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,152,767 Number of Sequences: 219361 Number of extensions: 1200805 Number of successful extensions: 7098 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 5526 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6993 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
