| Clone Name | baet99e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 Score = 182 bits (92), Expect = 5e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 184 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 243 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 244 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 303 Query: 319 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 378 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 304 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 363 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 75 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 134 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 135 gcgacacatcagtg 148
>dbj|AB110184.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 14FPB077 Length = 1057 Score = 182 bits (92), Expect = 5e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 135 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 194 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 195 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 254 Query: 319 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 378 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 255 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 314 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 26 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 85 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 86 gcgacacatcagtg 99
>dbj|AK068510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152K18, full insert sequence Length = 3163 Score = 182 bits (92), Expect = 5e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 2245 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 2304 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 2305 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 2364 Query: 319 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 378 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 2365 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 2424 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 2136 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 2195 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 2196 gcgacacatcagtg 2209
>dbj|AK061742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F01, full insert sequence Length = 1067 Score = 182 bits (92), Expect = 5e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 255 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 314 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 315 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 374 Query: 319 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 378 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 375 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 434 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 146 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 205 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 206 gcgacacatcagtg 219
>gb|AY104325.1| Zea mays PCO141653 mRNA sequence Length = 1167 Score = 176 bits (89), Expect = 3e-41 Identities = 155/177 (87%) Strand = Plus / Plus Query: 202 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 261 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 300 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 359 Query: 262 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 321 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 360 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 419 Query: 322 gatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 378 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 420 gatagcgtctatgacgctgtcaaatctatgactcagcacaacgtgggagctttggtg 476
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 168 bits (85), Expect = 8e-39 Identities = 133/149 (89%) Strand = Plus / Minus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 29915824 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 29915765 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 29915764 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 29915705 Query: 319 gatgatagtgtctatgatgctgtcaaatc 347 ||||| ||||||||||||||||||||| Sbjct: 29915704 gatgactctgtctatgatgctgtcaaatc 29915676 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 29915933 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 29915874 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 29915873 gcgacacatcagtg 29915860
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 168 bits (85), Expect = 8e-39 Identities = 133/149 (89%) Strand = Plus / Plus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 94782 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 94841 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 94842 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 94901 Query: 319 gatgatagtgtctatgatgctgtcaaatc 347 ||||| ||||||||||||||||||||| Sbjct: 94902 gatgactctgtctatgatgctgtcaaatc 94930 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 94673 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 94732 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 94733 gcgacacatcagtg 94746
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 168 bits (85), Expect = 8e-39 Identities = 133/149 (89%) Strand = Plus / Minus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 81765 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 81706 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 81705 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 81646 Query: 319 gatgatagtgtctatgatgctgtcaaatc 347 ||||| ||||||||||||||||||||| Sbjct: 81645 gatgactctgtctatgatgctgtcaaatc 81617 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 81874 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 81815 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 81814 gcgacacatcagtg 81801
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 168 bits (85), Expect = 8e-39 Identities = 133/149 (89%) Strand = Plus / Minus Query: 199 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 258 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 30007246 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 30007187 Query: 259 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 318 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 30007186 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 30007127 Query: 319 gatgatagtgtctatgatgctgtcaaatc 347 ||||| ||||||||||||||||||||| Sbjct: 30007126 gatgactctgtctatgatgctgtcaaatc 30007098 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 90 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 149 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 30007355 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 30007296 Query: 150 ccaacacatcagtg 163 | ||||||||||| Sbjct: 30007295 gcgacacatcagtg 30007282
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 141 bits (71), Expect = 2e-30 Identities = 191/231 (82%) Strand = Plus / Plus Query: 118 tcacatggcagtgtactcaaatctgctgtcctccaacacatcagtgttgtgaagcctgct 177 |||||||||||||| || |||| ||||| || ||||||||||| | | || || || Sbjct: 66051 tcacatggcagtgtgcttaaatacgctgttctacaacacatcagcgctcccaaaccagca 66110 Query: 178 atgctgcccgctgtgttcccgcgcttcatgtcagtatcatctgctcaaatagaggagagc 237 ||||| || ||||| || | || ||||||||||| |||||||||| ||||||| || Sbjct: 66111 atgcttcctgctgtcttttctcgtttcatgtcagtttcatctgctcgcctagaggatagt 66170 Query: 238 ggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgga 297 |||||||| | |||||| ||||| | |||||||| ||||||||||||||||||||| Sbjct: 66171 ggatttgaaactgccactgtatcagatgtcttgaagtctaaagggaagagtgctgatgga 66230 Query: 298 tcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcg 348 || |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 66231 tcttggctctggtgcaccacagaggatactgtctatgatgctgtcaaatcg 66281 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 348 gatgacacagcacaacgtgggagctttggtg 378 |||||| |||||||||||||||||||||||| Sbjct: 66380 gatgacgcagcacaacgtgggagctttggtg 66410
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 131 bits (66), Expect = 2e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 202 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 261 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 135870 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 135929 Query: 262 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 321 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135930 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 135989 Query: 322 gatagtgtctatgatgctgtcaaatc 347 ||||| |||||||| ||||||||||| Sbjct: 135990 gatagcgtctatgacgctgtcaaatc 136015 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 348 gatgacacagcacaacgtgggagctttggtg 378 |||||| |||||||||||||||||||||||| Sbjct: 136115 gatgactcagcacaacgtgggagctttggtg 136145
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 131 bits (66), Expect = 2e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 202 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 261 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 118941 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 119000 Query: 262 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 321 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 119001 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 119060 Query: 322 gatagtgtctatgatgctgtcaaatc 347 ||||| |||||||| ||||||||||| Sbjct: 119061 gatagcgtctatgacgctgtcaaatc 119086 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 348 gatgacacagcacaacgtgggagctttggtg 378 |||||| |||||||||||||||||||||||| Sbjct: 119186 gatgactcagcacaacgtgggagctttggtg 119216
>gb|AF459408.1| Narcissus pseudonarcissus DAFSAG13 senescence-associated putative protein mRNA, partial cds Length = 410 Score = 97.6 bits (49), Expect = 2e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 237 cggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgg 296 |||||||||||||| ||| ||| |||| |||| || || || || || ||||||||||| Sbjct: 228 cggatttgagagcaccacagtttcagacgttttaaaatcaaagggtaaaagtgctgatgg 287 Query: 297 atcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcgatgacaca 356 ||| ||||| |||||||| ||||| || | ||||||||||||||| ||||| ||||| || Sbjct: 288 atcttggctttggtgcactacagaggacactgtctatgatgctgtgaaatcaatgactca 347 Query: 357 gcacaacgtgggagctttggt 377 |||||| || || |||||||| Sbjct: 348 gcacaatgttggtgctttggt 368
>gb|AY389652.1| Hyacinthus orientalis CBS1 mRNA, partial cds Length = 818 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 241 tttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatggatca 300 ||||| |||| ||| ||| | ||| |||| ||||| ||||| |||||||||||||| || Sbjct: 145 tttgaaagcaccaccgtttcggatgttttaaagtctaaaggcaagagtgctgatggttcc 204 Query: 301 tggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcgatgacacagcac 360 ||||| ||||||||||||||||| ||||| |||||||| || ||||| ||||| || ||| Sbjct: 205 tggctgtggtgcaccacagatgacagtgtttatgatgccgtgaaatccatgactcaacac 264 Query: 361 aa 362 || Sbjct: 265 aa 266
>ref|NM_121124.3| Arabidopsis thaliana unknown protein AT5G10860 mRNA, complete cds Length = 1025 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 364 tttatgatgctgttaaatccatgacacaacacaa 397
>gb|AF361845.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 975 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 364 tttatgatgctgttaaatccatgacacaacacaa 397
>gb|AY066046.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 621 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 182 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 241 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 242 tttatgatgctgttaaatccatgacacaacacaa 275
>emb|BX832554.1|CNS0A15P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 257 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 316 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 317 tttatgatgctgttaaatccatgacacaacacaa 350
>emb|BX832342.1|CNS0A0VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 927 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 245 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 304 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 305 tttatgatgctgttaaatccatgacacaacacaa 338
>emb|BX831549.1|CNS0A0VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 255 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 314 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 315 tttatgatgctgttaaatccatgacacaacacaa 348
>emb|BX831340.1|CNS0A0OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 279 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 338 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 339 tttatgatgctgttaaatccatgacacaacacaa 372
>emb|BX833110.1|CNS0A0JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 75.8 bits (38), Expect = 9e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 287 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 346 Query: 329 tctatgatgctgtcaaatcgatgacacagcacaa 362 | ||||||||||| ||||| |||||||| ||||| Sbjct: 347 tttatgatgctgttaaatccatgacacaacacaa 380
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project) Length = 98473 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 37589 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 37530 Query: 329 tctatgatgctgtcaaatc 347 | ||||||||||| ||||| Sbjct: 37529 tttatgatgctgttaaatc 37511
>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons 1-6 Length = 5177 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 269 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 328 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 4850 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 4909 Query: 329 tctatgatgctgtcaaatc 347 | ||||||||||| ||||| Sbjct: 4910 tttatgatgctgttaaatc 4928
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 aaatgcagcgagcaattcaag 109 ||||||||||||||||||||| Sbjct: 1152267 aaatgcagcgagcaattcaag 1152247
>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete sequence Length = 212903 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgtcctccaacacatcagt 162 |||||||||||||||||||| Sbjct: 147714 ctgtcctccaacacatcagt 147733
>emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chromosome 1p31.3-32.3 Contains gene FLJ20331, two novel genes, the SFRS11 gene for arginine/serine-rich 11 splicing factor and the 3' end of gene DKFZP566D1346, complete sequence Length = 131612 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tattttgaagtccaaaggga 283 |||||||||||||||||||| Sbjct: 24496 tattttgaagtccaaaggga 24515
>emb|AL157413.18| Human DNA sequence from clone RP11-526K17 on chromosome 20 Contains a novel gene and part of the C20orf39 gene for chromosome 20 open reading frame 39, complete sequence Length = 133207 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aagtccaaagggaagagtgc 290 |||||||||||||||||||| Sbjct: 126202 aagtccaaagggaagagtgc 126183
>gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, complete sequence Length = 177163 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 agcactgttgcagatatttt 269 |||||||||||||||||||| Sbjct: 119062 agcactgttgcagatatttt 119081
>gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, complete sequence Length = 157232 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgtcctccaacacatcagt 162 |||||||||||||||||||| Sbjct: 62256 ctgtcctccaacacatcagt 62237 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,129,676 Number of Sequences: 3902068 Number of extensions: 3129676 Number of successful extensions: 51201 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51070 Number of HSP's gapped (non-prelim): 122 length of query: 378 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 356 effective length of database: 17,147,199,772 effective search space: 6104403118832 effective search space used: 6104403118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)