ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 6e-13
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 6e-13
3dbj|AK100847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 6e-13
4gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 82 6e-13
5gb|AY105486.1| Zea mays PCO104538 mRNA sequence 54 1e-04
6emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete ch... 42 0.49
7emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chr... 42 0.49
8gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.9
9ref|NM_010721.1| Mus musculus lamin B1 (Lmnb1), mRNA 40 1.9
10gb|BC058392.1| Mus musculus lamin B1, mRNA (cDNA clone MGC:67037... 40 1.9
11gb|BC052729.1| Mus musculus lamin B1, mRNA (cDNA clone MGC:64675... 40 1.9
12gb|AC138016.14| Medicago truncatula clone mth2-34f15, complete s... 40 1.9
13emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chro... 40 1.9
14gb|AC127734.4| Rattus norvegicus 18 BAC CH230-372C24 (Children's... 40 1.9
15emb|X16705.1|MMLAMINB Mouse mRNA for lamin B 40 1.9
16gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, co... 40 1.9
17dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynth... 40 1.9
18dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 40 1.9
19dbj|AK132252.1| Mus musculus 12 days embryo embryonic body below... 40 1.9
20dbj|AK079511.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 1.9
21dbj|AK089110.1| Mus musculus 2 days neonate thymus thymic cells ... 40 1.9
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
24dbj|D50080.2| Mus musculus gene for lamin B1, complete cds 40 1.9
25ref|NM_053905.1| Rattus norvegicus lamin B1 (Lmnb1), mRNA 40 1.9
26ref|XM_579583.1| PREDICTED: Rattus norvegicus hypothetical gene ... 40 1.9
27gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 1.9
28gb|AY688471.1| Triticum aestivum cultivar Bezostaja metallothion... 40 1.9
29gb|AY688468.1| Triticum aestivum cultivar Bezostaja metallothion... 40 1.9
30dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
31dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
32gb|M35153.1|MUSLAMB Mus musculus lamin B mRNA, complete cds 40 1.9
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 1.9
34gb|U72353.1|RNU72353 Rattus norvegicus lamin B1 mRNA, complete cds 40 1.9
35gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cance... 38 7.7
36ref|XM_529748.1| PREDICTED: Pan troglodytes LOC453848 (LOC453848... 38 7.7
37ref|XM_477978.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.7
38gb|AC102355.13| Mus musculus chromosome 5, clone RP23-120C8, com... 38 7.7
39gb|AY320035.2| Bacteriophage VWB, complete genome 38 7.7
40gb|AC004234.1| Homo sapiens chromosome 16, cosmid clone 399H11 (... 38 7.7
41gb|AC151715.3| Mus musculus BAC clone RP23-396L12 from chromosom... 38 7.7
42gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome... 38 7.7
43gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromo... 38 7.7
44gb|AC129573.16| Mus musculus chromosome 6, clone RP23-457B5, com... 38 7.7
45gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 38 7.7
46gb|AC147367.3| Mus musculus BAC clone RP24-424M5 from chromosome... 38 7.7
47gb|AY261531.1| Echis ocellatus prothrombin activator EoMP06 mRNA... 38 7.7
48gb|AC124432.5| Mus musculus BAC clone RP24-243L15 from chromosom... 38 7.7
49gb|AC127252.3| Mus musculus BAC clone RP24-276A6 from chromosome... 38 7.7
50gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome... 38 7.7
51gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome... 38 7.7
52emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chro... 38 7.7
53emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chro... 38 7.7
54emb|AL512595.14| Human DNA sequence from clone RP11-172C24 on ch... 38 7.7
55emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on ch... 38 7.7
56emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chr... 38 7.7
57gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 38 7.7
58emb|AL139090.11| Human DNA sequence from clone RP11-12B13 on chr... 38 7.7
59emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 o... 38 7.7
60ref|XM_790084.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 7.7
61ref|XM_778851.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 7.7
62emb|AL713926.9| Mouse DNA sequence from clone RP23-32H19 on chro... 38 7.7
63emb|AL606466.12| Mouse DNA sequence from clone RP23-348N2 on chr... 38 7.7
64emb|AL645771.1|SCSCP2 Streptomyces coelicolor A3(2) plasmid SCP2 38 7.7
65gb|AC112673.7| Homo sapiens chromosome 8, clone RP11-212F11, com... 38 7.7
66emb|CR627258.1| Homo sapiens mRNA; cDNA DKFZp686P238 (from clone... 38 7.7
67gb|AE005849.1| Caulobacter crescentus CB15 section 175 of 359 of... 38 7.7
68gb|AE005731.1| Caulobacter crescentus CB15 section 57 of 359 of ... 38 7.7
69gb|CP000133.1| Rhizobium etli CFN 42, complete genome 38 7.7
70dbj|AK145541.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 38 7.7
71dbj|AK160938.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 38 7.7
72dbj|AK163241.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 38 7.7
73gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene,... 38 7.7
74gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 7.7
75gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Can... 38 7.7
76gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 38 7.7
77emb|BX820891.1|CNS0AADE Arabidopsis thaliana Full-length cDNA Co... 38 7.7
78gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 38 7.7
79gb|AC010747.10| Homo sapiens BAC clone RP11-555H9 from 2, comple... 38 7.7
80gb|AC108070.2| Homo sapiens BAC clone RP11-638P8 from 2, complet... 38 7.7
81dbj|AB046085.1| Macaca fascicularis brain cDNA, clone:QccE-14947... 38 7.7
82gb|AC158989.1| Mus musculus BAC clone RP23-399H20 from chromosom... 38 7.7
83gb|AC009530.5|AC009530 Homo sapiens chromosome 7 clone RP11-302L... 38 7.7
84gb|AC134504.2| Homo sapiens 3 BAC RP11-316F12 (Roswell Park Canc... 38 7.7
85dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
86dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 38 7.7
87emb|AJ311547.1|VCA311547 Volvox carteri f. nagariensis mRNA for ... 38 7.7
88gb|AY919043.1| Homo sapiens truncated REV1-like (yeast) (REV1L) ... 38 7.7
89ref|NM_024459.2| Mus musculus protein phosphatase 3, regulatory ... 38 7.7
90dbj|AP001591.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.7
91gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromo... 38 7.7
92gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, co... 38 7.7
93emb|AL832203.1|HSM803510 Homo sapiens mRNA; cDNA DKFZp686H142 (f... 38 7.7
94gb|AC125522.4| Mus musculus BAC clone RP24-363I16 from 1, comple... 38 7.7
95gb|AC147129.3| Mus musculus BAC clone RP24-531L5 from 1, complet... 38 7.7
96gb|AC150033.2| Mus musculus BAC clone RP23-449N19 from 3, comple... 38 7.7
97emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chr... 38 7.7
98dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 38 7.7
99dbj|AP006676.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 7.7
100dbj|AB070345.1| Volvox carteri f. nagariensis s9 mRNA for matrix... 38 7.7
101dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.7 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 64/71 (90%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                           
Query: 13      ccccgaaagcctccgcccgccatggcgaccgccgcccaggtcgccgcc---acattcctc 69
               |||||||| ||||||||||||||||||||||||||||||| |||||||    | ||||||
Sbjct: 7749409 ccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcctc 7749350

                          
Query: 70      tccttcctctc 80
               |||||||||||
Sbjct: 7749349 tccttcctctc 7749339
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 64/71 (90%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                           
Query: 13      ccccgaaagcctccgcccgccatggcgaccgccgcccaggtcgccgcc---acattcctc 69
               |||||||| ||||||||||||||||||||||||||||||| |||||||    | ||||||
Sbjct: 7747244 ccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcctc 7747185

                          
Query: 70      tccttcctctc 80
               |||||||||||
Sbjct: 7747184 tccttcctctc 7747174
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>dbj|AK100847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123H08, full
           insert sequence
          Length = 1094

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 64/71 (90%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                       
Query: 13  ccccgaaagcctccgcccgccatggcgaccgccgcccaggtcgccgcc---acattcctc 69
           |||||||| ||||||||||||||||||||||||||||||| |||||||    | ||||||
Sbjct: 55  ccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcctc 114

                      
Query: 70  tccttcctctc 80
           |||||||||||
Sbjct: 115 tccttcctctc 125
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 64/71 (90%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                          
Query: 13     ccccgaaagcctccgcccgccatggcgaccgccgcccaggtcgccgcc---acattcctc 69
              |||||||| ||||||||||||||||||||||||||||||| |||||||    | ||||||
Sbjct: 103385 ccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcctc 103444

                         
Query: 70     tccttcctctc 80
              |||||||||||
Sbjct: 103445 tccttcctctc 103455
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>gb|AY105486.1| Zea mays PCO104538 mRNA sequence
          Length = 1046

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                     
Query: 31 gccatggcgaccgccgcccaggtcgccgccacattcctctcct 73
          |||||||||||||| | || |||||||||||| ||||||||||
Sbjct: 30 gccatggcgaccgcagaccgggtcgccgccaccttcctctcct 72
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>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12
          Length = 299350

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    ggcgaccgccgcccaggtcgc 56
             |||||||||||||||||||||
Sbjct: 23683 ggcgaccgccgcccaggtcgc 23703
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>emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chromosome 4, complete
             sequence
          Length = 142447

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 103   ccctctccttccgcctccttcctgg 127
             |||||||| ||||||||||||||||
Sbjct: 18802 ccctctccctccgcctccttcctgg 18778
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>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0059C14,
              complete sequence
          Length = 142138

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gccgcccaggtcgccgccac 62
              ||||||||||||||||||||
Sbjct: 132437 gccgcccaggtcgccgccac 132418
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>ref|NM_010721.1| Mus musculus lamin B1 (Lmnb1), mRNA
          Length = 2797

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 246 ccgcccgccatggcgaccgc 265
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>gb|BC058392.1| Mus musculus lamin B1, mRNA (cDNA clone MGC:67037 IMAGE:6816118),
           complete cds
          Length = 2820

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 241 ccgcccgccatggcgaccgc 260
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>gb|BC052729.1| Mus musculus lamin B1, mRNA (cDNA clone MGC:64675 IMAGE:6816118),
           complete cds
          Length = 2820

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 241 ccgcccgccatggcgaccgc 260
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>gb|AC138016.14| Medicago truncatula clone mth2-34f15, complete sequence
          Length = 116164

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tcctctccttcctctcatgc 84
             ||||||||||||||||||||
Sbjct: 26283 tcctctccttcctctcatgc 26302
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>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
              novel genes, the 5' end of a novel gene, a novel pseudogene
              and seven CpG islands, complete sequence
          Length = 165696

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     tcctctccttcctctcatgccccc 88
              |||||||||||||||||| |||||
Sbjct: 112362 tcctctccttcctctcatcccccc 112385
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>gb|AC127734.4| Rattus norvegicus 18 BAC CH230-372C24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 166134

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     ccgcccgccatggcgaccgc 44
              ||||||||||||||||||||
Sbjct: 163177 ccgcccgccatggcgaccgc 163158
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>emb|X16705.1|MMLAMINB Mouse mRNA for lamin B
          Length = 2797

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 246 ccgcccgccatggcgaccgc 265
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>gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, complete sequence
          Length = 204022

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ccgcccgccatggcgaccgc 44
             ||||||||||||||||||||
Sbjct: 60102 ccgcccgccatggcgaccgc 60121
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>dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynthetic gene cluster,
            complete cds
          Length = 27448

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   ccgccgcccaggtcgccgcc 60
            ||||||||||||||||||||
Sbjct: 3965 ccgccgcccaggtcgccgcc 3984
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>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      ccaggtcgccgccacattcc 67
               ||||||||||||||||||||
Sbjct: 1264380 ccaggtcgccgccacattcc 1264361
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>dbj|AK132252.1| Mus musculus 12 days embryo embryonic body below diaphragm region
           cDNA, RIKEN full-length enriched library,
           clone:3732426K03 product:lamin B1, full insert sequence
          Length = 2843

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 292 ccgcccgccatggcgaccgc 311
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>dbj|AK079511.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130091A17 product:lamin B1,
           full insert sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 293 ccgcccgccatggcgaccgc 312
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>dbj|AK089110.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430039O09
           product:lamin B1, full insert sequence
          Length = 2213

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 259 ccgcccgccatggcgaccgc 278
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 43      gccgcccaggtcgccgccac 62
               ||||||||||||||||||||
Sbjct: 8833666 gccgcccaggtcgccgccac 8833647
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 41      ccgccgcccaggtcgccgcc 60
               ||||||||||||||||||||
Sbjct: 4188163 ccgccgcccaggtcgccgcc 4188144



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 98       ccgctccctctccttccgc 116
                |||||||||||||||||||
Sbjct: 16139279 ccgctccctctccttccgc 16139297
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>dbj|D50080.2| Mus musculus gene for lamin B1, complete cds
          Length = 6552

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 802 ccgcccgccatggcgaccgc 821
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>ref|NM_053905.1| Rattus norvegicus lamin B1 (Lmnb1), mRNA
          Length = 2154

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 318 ccgcccgccatggcgaccgc 337
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>ref|XM_579583.1| PREDICTED: Rattus norvegicus hypothetical gene supported by
           NM_053905 (LOC497722), mRNA
          Length = 2148

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 316 ccgcccgccatggcgaccgc 335
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 26      cgcccgccatggcgaccgccgccc 49
               |||||||| |||||||||||||||
Sbjct: 4496933 cgcccgccgtggcgaccgccgccc 4496910
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>gb|AY688471.1| Triticum aestivum cultivar Bezostaja metallothionein gene, complete
           cds
          Length = 400

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  ccgccgcccaggtcgccgcc 60
           ||||||||||||||||||||
Sbjct: 261 ccgccgcccaggtcgccgcc 280
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>gb|AY688468.1| Triticum aestivum cultivar Bezostaja metallothionein mRNA, complete
           cds
          Length = 228

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  ccgccgcccaggtcgccgcc 60
           ||||||||||||||||||||
Sbjct: 89  ccgccgcccaggtcgccgcc 108
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>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1361_E02
          Length = 100168

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ccgccgcccaggtcgccgcc 60
             ||||||||||||||||||||
Sbjct: 71785 ccgccgcccaggtcgccgcc 71766
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>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1014_E09
          Length = 184624

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   ccgccgcccaggtcgccgcc 60
            ||||||||||||||||||||
Sbjct: 9217 ccgccgcccaggtcgccgcc 9198
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>gb|M35153.1|MUSLAMB Mus musculus lamin B mRNA, complete cds
          Length = 2789

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 247 ccgcccgccatggcgaccgc 266
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 43      gccgcccaggtcgccgccac 62
               ||||||||||||||||||||
Sbjct: 8904429 gccgcccaggtcgccgccac 8904410
to top
>gb|U72353.1|RNU72353 Rattus norvegicus lamin B1 mRNA, complete cds
          Length = 2154

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ccgcccgccatggcgaccgc 44
           ||||||||||||||||||||
Sbjct: 318 ccgcccgccatggcgaccgc 337
to top
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 170561

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     tcctctccttcctctcatg 83
              |||||||||||||||||||
Sbjct: 117477 tcctctccttcctctcatg 117459
to top
>ref|XM_529748.1| PREDICTED: Pan troglodytes LOC453848 (LOC453848), mRNA
          Length = 756

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 91  caccacaccgctccctctc 109
           |||||||||||||||||||
Sbjct: 237 caccacaccgctccctctc 219
to top
>ref|XM_477978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1092

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  ccgctccctctccttccgc 116
           |||||||||||||||||||
Sbjct: 519 ccgctccctctccttccgc 501
to top
>gb|AC102355.13| Mus musculus chromosome 5, clone RP23-120C8, complete sequence
          Length = 194854

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    cctctccttccgcctcctt 122
              |||||||||||||||||||
Sbjct: 181851 cctctccttccgcctcctt 181869
to top
>gb|AY320035.2| Bacteriophage VWB, complete genome
          Length = 49220

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 25   ccgcccgccatggcgaccgccgc 47
            ||||||||||||||| |||||||
Sbjct: 6846 ccgcccgccatggcgtccgccgc 6824
to top
>gb|AC004234.1| Homo sapiens chromosome 16, cosmid clone 399H11 (LANL), complete
             sequence
          Length = 41103

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    caccacaccgctccctctc 109
             |||||||||||||||||||
Sbjct: 32386 caccacaccgctccctctc 32368
to top
>gb|AC151715.3| Mus musculus BAC clone RP23-396L12 from chromosome 7, complete sequence
          Length = 204221

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     attcctctccttcctctca 81
              |||||||||||||||||||
Sbjct: 127039 attcctctccttcctctca 127057
to top
>gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome 18, complete sequence
          Length = 239075

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 59     ccacattcctctccttcctctca 81
              |||| ||||||||||||||||||
Sbjct: 221950 ccaccttcctctccttcctctca 221972
to top
>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete
             sequence
          Length = 161457

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   tctccttccgcctccttcc 124
             |||||||||||||||||||
Sbjct: 43892 tctccttccgcctccttcc 43910
to top
>gb|AC129573.16| Mus musculus chromosome 6, clone RP23-457B5, complete sequence
          Length = 178159

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 103   ccctctccttccgcctccttcct 125
             |||||||||||| ||||||||||
Sbjct: 78746 ccctctccttccccctccttcct 78724
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 32      ccatggcgaccgccgcccaggtc 54
               |||||||| ||||||||||||||
Sbjct: 1411244 ccatggcgtccgccgcccaggtc 1411266
to top
>gb|AC147367.3| Mus musculus BAC clone RP24-424M5 from chromosome 18, complete
            sequence
          Length = 175316

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 59   ccacattcctctccttcctctca 81
            |||| ||||||||||||||||||
Sbjct: 1820 ccaccttcctctccttcctctca 1842
to top
>gb|AY261531.1| Echis ocellatus prothrombin activator EoMP06 mRNA, partial cds
          Length = 1548

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 60  cacattcctctccttcctc 78
           |||||||||||||||||||
Sbjct: 955 cacattcctctccttcctc 937
to top
>gb|AC124432.5| Mus musculus BAC clone RP24-243L15 from chromosome 18, complete
             sequence
          Length = 160728

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 59    ccacattcctctccttcctctca 81
             |||| ||||||||||||||||||
Sbjct: 19567 ccaccttcctctccttcctctca 19545
to top
>gb|AC127252.3| Mus musculus BAC clone RP24-276A6 from chromosome 3, complete sequence
          Length = 173199

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     cattcctctccttcctctc 80
              |||||||||||||||||||
Sbjct: 166123 cattcctctccttcctctc 166105
to top
>gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome 7, complete sequence
          Length = 145046

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    attcctctccttcctctca 81
             |||||||||||||||||||
Sbjct: 15834 attcctctccttcctctca 15852
to top
>gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome 6, complete sequence
          Length = 187752

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     tcctctccttcctctcatg 83
              |||||||||||||||||||
Sbjct: 175837 tcctctccttcctctcatg 175855
to top
>emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chromosome 9 Contains part
             of the gene for a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 162657

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    ttcctctccttcctctcat 82
             |||||||||||||||||||
Sbjct: 43265 ttcctctccttcctctcat 43247
to top
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated protein
             family, a novel pseudogene and a CpG island, complete
             sequence
          Length = 152623

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    ttcctctccttcctctcat 82
             |||||||||||||||||||
Sbjct: 28709 ttcctctccttcctctcat 28691
to top
>emb|AL512595.14| Human DNA sequence from clone RP11-172C24 on chromosome 10 Contains the
             5' end of a gene for cellular modulator of immune
             recognition (c-MIR)and one CpG island, complete sequence
          Length = 80779

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    ctccttcctctcatgcccc 87
             |||||||||||||||||||
Sbjct: 23014 ctccttcctctcatgcccc 23032
to top
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the
             5' end of the CNTNAP3 gene for a contactin associated
             protein-like 3 and two CpG islands, complete sequence
          Length = 118564

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    ttcctctccttcctctcat 82
             |||||||||||||||||||
Sbjct: 91027 ttcctctccttcctctcat 91045
to top
>emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated
             protein-like 3 (CNTNAP3), an RNA binding motif protein 17
             (RBM17) pseudogene and a CpG island, complete sequence
          Length = 179833

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    ttcctctccttcctctcat 82
             |||||||||||||||||||
Sbjct: 99155 ttcctctccttcctctcat 99173
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 16      cgaaagcctccgcccgcca 34
               |||||||||||||||||||
Sbjct: 1375547 cgaaagcctccgcccgcca 1375529
to top
>emb|AL139090.11| Human DNA sequence from clone RP11-12B13 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 128468

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   tccttcctggtgaccccgg 136
             |||||||||||||||||||
Sbjct: 34203 tccttcctggtgaccccgg 34221
to top
>emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 on chromosome 6p22.1-22.3
             Contains part of a novel gene, complete sequence
          Length = 103268

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 101   ctccctctccttccgcctccttc 123
             |||||||||||||| ||||||||
Sbjct: 98583 ctccctctccttccccctccttc 98561
to top
>ref|XM_790084.1| PREDICTED: Strongylocentrotus purpuratus similar to eukaryotic
           translation initiation factor 2, subunit 2 beta, 38kDa
           (LOC590481), partial mRNA
          Length = 853

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 101 ctccctctccttccgcctccttc 123
           |||| ||||||||||||||||||
Sbjct: 217 ctccatctccttccgcctccttc 195
to top
>ref|XM_778851.1| PREDICTED: Strongylocentrotus purpuratus similar to Eukaryotic
           translation initiation factor 2 beta subunit
           (eIF-2-beta) (LOC578696), partial mRNA
          Length = 795

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 101 ctccctctccttccgcctccttc 123
           |||| ||||||||||||||||||
Sbjct: 403 ctccatctccttccgcctccttc 381
to top
>emb|AL713926.9| Mouse DNA sequence from clone RP23-32H19 on chromosome 11 Contains
            the Ppp3r1 gene for protein phospatase 3 regulatory
            subunit B alpha isoform (calcineurin B, type I), two
            novel genes and two CpG islands, complete sequence
          Length = 86007

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 141  gcccgcctcgctccgggcc 159
            |||||||||||||||||||
Sbjct: 999  gcccgcctcgctccgggcc 1017
to top
>emb|AL606466.12| Mouse DNA sequence from clone RP23-348N2 on chromosome 11 Contains
            the 5' end of the Ppp3r1 gene for protein phospatase 3
            regulatory subunit B alpha isoform (calcineurin B, type
            I), a ribosomal protein L39 (Rpl39) pseudogene, a novel
            gene, the Plek gene for pleckstrin, a CUB domain and
            EGF-like repeat containing (Cegf) protein pseudogene and
            a CpG island, complete sequence
          Length = 201805

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 141  gcccgcctcgctccgggcc 159
            |||||||||||||||||||
Sbjct: 1002 gcccgcctcgctccgggcc 984
to top
>emb|AL645771.1|SCSCP2 Streptomyces coelicolor A3(2) plasmid SCP2
          Length = 31317

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 34    atggcgaccgccgcccaggtcgccgcc 60
             |||||| ||||||||||| ||||||||
Sbjct: 13797 atggcgtccgccgcccagctcgccgcc 13771
to top
>gb|AC112673.7| Homo sapiens chromosome 8, clone RP11-212F11, complete sequence
          Length = 167547

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    tccttcctctcatgccccc 88
             |||||||||||||||||||
Sbjct: 55786 tccttcctctcatgccccc 55768
to top
>emb|CR627258.1| Homo sapiens mRNA; cDNA DKFZp686P238 (from clone DKFZp686P238)
          Length = 6579

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 58   gccacattcctctccttcc 76
            |||||||||||||||||||
Sbjct: 2153 gccacattcctctccttcc 2171
to top
>gb|AE005849.1| Caulobacter crescentus CB15 section 175 of 359 of the complete genome
          Length = 14878

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 29    ccgccatggcgaccgccgcccag 51
             |||||||| ||||||||||||||
Sbjct: 11089 ccgccatgacgaccgccgcccag 11111
to top
>gb|AE005731.1| Caulobacter crescentus CB15 section 57 of 359 of the complete genome
          Length = 10180

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 43   gccgcccaggtcgccgcca 61
            |||||||||||||||||||
Sbjct: 8844 gccgcccaggtcgccgcca 8862
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 30      cgccatggcgaccgccgcccagg 52
               ||||||||||| |||||||||||
Sbjct: 3102522 cgccatggcgatcgccgcccagg 3102544
to top
>dbj|AK145541.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0012M12 product:protein phospatase 3,
           regulatory subunit B, alpha isoform (calcineurin B, type
           I), full insert sequence
          Length = 2806

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 141 gcccgcctcgctccgggcc 159
           |||||||||||||||||||
Sbjct: 103 gcccgcctcgctccgggcc 121
to top
>dbj|AK160938.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4021401O17 product:protein phospatase 3,
           regulatory subunit B, alpha isoform (calcineurin B, type
           I), full insert sequence
          Length = 2815

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 141 gcccgcctcgctccgggcc 159
           |||||||||||||||||||
Sbjct: 112 gcccgcctcgctccgggcc 130
to top
>dbj|AK163241.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020005D14 product:protein phospatase 3,
           regulatory subunit B, alpha isoform (calcineurin B, type
           I), full insert sequence
          Length = 2234

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 141 gcccgcctcgctccgggcc 159
           |||||||||||||||||||
Sbjct: 100 gcccgcctcgctccgggcc 118
to top
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds,
              alternatively spliced
          Length = 379048

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     tccttcctctcatgccccc 88
              |||||||||||||||||||
Sbjct: 327679 tccttcctctcatgccccc 327697
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 35      tggcgaccgccgcccaggtcgcc 57
               |||||||||||||||||| ||||
Sbjct: 2473839 tggcgaccgccgcccaggccgcc 2473817
to top
>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 195877

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cctctccttcctctcatgc 84
             |||||||||||||||||||
Sbjct: 93143 cctctccttcctctcatgc 93125
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      cgaccgccgcccaggtcgc 56
               |||||||||||||||||||
Sbjct: 3142855 cgaccgccgcccaggtcgc 3142837



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 38      cgaccgccgcccaggtcgccgcc 60
               |||||||||||||||||| ||||
Sbjct: 3099907 cgaccgccgcccaggtcggcgcc 3099885
to top
>emb|BX820891.1|CNS0AADE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH79ZF02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1421

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 cctctccttccgcctcctt 122
           |||||||||||||||||||
Sbjct: 574 cctctccttccgcctcctt 592
to top
>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   tctccttccgcctccttcc 124
             |||||||||||||||||||
Sbjct: 35188 tctccttccgcctccttcc 35206
to top
>gb|AC010747.10| Homo sapiens BAC clone RP11-555H9 from 2, complete sequence
          Length = 159512

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     cacattcctctccttcctc 78
              |||||||||||||||||||
Sbjct: 152332 cacattcctctccttcctc 152314
to top
>gb|AC108070.2| Homo sapiens BAC clone RP11-638P8 from 2, complete sequence
          Length = 92113

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 66   cctctccttcctctcatgccccc 88
            |||||||| ||||||||||||||
Sbjct: 4970 cctctcctccctctcatgccccc 4992
to top
>dbj|AB046085.1| Macaca fascicularis brain cDNA, clone:QccE-14947, similar to human
           TBC1 domain family member 13 (TBC1D13), mRNA,
           NM_018201.2
          Length = 2839

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 106 tctccttccgcctccttcc 124
           |||||||||||||||||||
Sbjct: 877 tctccttccgcctccttcc 895
to top
>gb|AC158989.1| Mus musculus BAC clone RP23-399H20 from chromosome 3, complete sequence
          Length = 190372

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 62     cattcctctccttcctctc 80
              |||||||||||||||||||
Sbjct: 137374 cattcctctccttcctctc 137392
to top
>gb|AC009530.5|AC009530 Homo sapiens chromosome 7 clone RP11-302L6, complete sequence
          Length = 189653

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 65     tcctctccttcctctcatgcccc 87
              |||||||||||||| ||||||||
Sbjct: 105383 tcctctccttcctcccatgcccc 105361
to top
>gb|AC134504.2| Homo sapiens 3 BAC RP11-316F12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87167

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    gccacattcctctccttcc 76
             |||||||||||||||||||
Sbjct: 75192 gccacattcctctccttcc 75210
to top
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0038F09
          Length = 166568

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     ccgctccctctccttccgc 116
              |||||||||||||||||||
Sbjct: 109612 ccgctccctctccttccgc 109630
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     accgccgcccaggtcgccg 58
              |||||||||||||||||||
Sbjct: 838428 accgccgcccaggtcgccg 838410
to top
>emb|AJ311547.1|VCA311547 Volvox carteri f. nagariensis mRNA for metalloproteinase (VMP1
            protein)
          Length = 1722

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 40   accgccgcccaggtcgccgccac 62
            ||||||| |||||||||||||||
Sbjct: 1584 accgccgaccaggtcgccgccac 1606
to top
>gb|AY919043.1| Homo sapiens truncated REV1-like (yeast) (REV1L) gene, complete cds
          Length = 93047

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   tctccttccgcctccttcc 124
             |||||||||||||||||||
Sbjct: 86656 tctccttccgcctccttcc 86638
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>ref|NM_024459.2| Mus musculus protein phosphatase 3, regulatory subunit B, alpha
           isoform (calcineurin B, type I) (Ppp3r1), mRNA
          Length = 2829

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 141 gcccgcctcgctccgggcc 159
           |||||||||||||||||||
Sbjct: 126 gcccgcctcgctccgggcc 144
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>dbj|AP001591.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-838I13, complete
              sequence
          Length = 178982

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 103    ccctctccttccgcctcct 121
              |||||||||||||||||||
Sbjct: 129871 ccctctccttccgcctcct 129853
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>gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromosome unknown, complete
              sequence
          Length = 219428

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 106    tctccttccgcctccttcc 124
              |||||||||||||||||||
Sbjct: 187356 tctccttccgcctccttcc 187338
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>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 103   ccctctccttccgcctccttcct 125
             |||||||||||| ||||||||||
Sbjct: 98206 ccctctccttccccctccttcct 98228
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>emb|AL832203.1|HSM803510 Homo sapiens mRNA; cDNA DKFZp686H142 (from clone DKFZp686H142)
          Length = 6613

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 58   gccacattcctctccttcc 76
            |||||||||||||||||||
Sbjct: 2185 gccacattcctctccttcc 2203
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>gb|AC125522.4| Mus musculus BAC clone RP24-363I16 from 1, complete sequence
          Length = 100480

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 102   tccctctccttccgcctccttcc 124
             ||||||||||||| |||||||||
Sbjct: 56253 tccctctccttccccctccttcc 56231
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>gb|AC147129.3| Mus musculus BAC clone RP24-531L5 from 1, complete sequence
          Length = 147476

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 102    tccctctccttccgcctccttcc 124
              ||||||||||||| |||||||||
Sbjct: 116466 tccctctccttccccctccttcc 116488
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>gb|AC150033.2| Mus musculus BAC clone RP23-449N19 from 3, complete sequence
          Length = 179293

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    cattcctctccttcctctc 80
             |||||||||||||||||||
Sbjct: 61745 cattcctctccttcctctc 61727
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>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete
              sequence
          Length = 146143

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     ttcctctccttcctctcat 82
              |||||||||||||||||||
Sbjct: 102952 ttcctctccttcctctcat 102970
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 39      gaccgccgcccaggtcgcc 57
               |||||||||||||||||||
Sbjct: 2107875 gaccgccgcccaggtcgcc 2107893
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>dbj|AP006676.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371a,
             complete sequence
          Length = 46189

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 101   ctccctctccttccgcctccttc 123
             |||||||||||||| ||||||||
Sbjct: 33975 ctccctctccttccacctccttc 33997
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>dbj|AB070345.1| Volvox carteri f. nagariensis s9 mRNA for matrix metalloproteinase,
            complete cds
          Length = 3590

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 40   accgccgcccaggtcgccgccac 62
            ||||||| |||||||||||||||
Sbjct: 1817 accgccgaccaggtcgccgccac 1839
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>dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H9, complete
             sequence
          Length = 184057

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 103   ccctctccttccgcctcct 121
             |||||||||||||||||||
Sbjct: 32561 ccctctccttccgcctcct 32543


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,366,143
Number of Sequences: 3902068
Number of extensions: 1366143
Number of successful extensions: 139170
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137776
Number of HSP's gapped (non-prelim): 1394
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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