| Clone Name | baet99c12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 1e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 147 cggcgagtccttcgccaaagttcttcgagtgctggatcttggagcagtcccgtgacct 204 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 3091571 cggcgagtcgttcgccaa-gttcttcgagtgctggatctccgagcagtcccgcgacct 3091515
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 67.9 bits (34), Expect = 1e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 147 cggcgagtccttcgccaaagttcttcgagtgctggatcttggagcagtcccgtgacct 204 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 35359 cggcgagtcgttcgccaa-gttcttcgagtgctggatctccgagcagtcccgcgacct 35303
>dbj|AK106273.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G11, full insert sequence Length = 1336 Score = 67.9 bits (34), Expect = 1e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 147 cggcgagtccttcgccaaagttcttcgagtgctggatcttggagcagtcccgtgacct 204 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 124 cggcgagtcgttcgccaa-gttcttcgagtgctggatctccgagcagtcccgcgacct 180
>dbj|AK106334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F11, full insert sequence Length = 1256 Score = 67.9 bits (34), Expect = 1e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 147 cggcgagtccttcgccaaagttcttcgagtgctggatcttggagcagtcccgtgacct 204 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 125 cggcgagtcgttcgccaa-gttcttcgagtgctggatctccgagcagtcccgcgacct 181
>dbj|AK070330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049H21, full insert sequence Length = 1264 Score = 67.9 bits (34), Expect = 1e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 147 cggcgagtccttcgccaaagttcttcgagtgctggatcttggagcagtcccgtgacct 204 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 128 cggcgagtcgttcgccaa-gttcttcgagtgctggatctccgagcagtcccgcgacct 184
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 67.9 bits (34), Expect = 1e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 147 cggcgagtccttcgccaaagttcttcgagtgctggatcttggagcagtcccgtgacct 204 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 59611 cggcgagtcgttcgccaa-gttcttcgagtgctggatctccgagcagtcccgcgacct 59555
>gb|DQ394104.1| Neurospora crassa suppressor of ascus dominance-2 (Sad2) pseudogene, Sad2-92 allele, complete sequence Length = 4048 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Plus Query: 22 cactccaaagccatcgaaacctccaccaac 51 ||||||||||||||| || ||||||||||| Sbjct: 2653 cactccaaagccatcaaagcctccaccaac 2682
>gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, complete sequence Length = 119991 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gagccacttggatcaccatg 90 |||||||||||||||||||| Sbjct: 95514 gagccacttggatcaccatg 95533
>dbj|AK147250.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1002D21 product:B930044J06 protein (Fragment), full insert sequence Length = 10713 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gagccacttggatcaccatg 90 |||||||||||||||||||| Sbjct: 793 gagccacttggatcaccatg 812
>emb|AL928567.6| Mouse DNA sequence from clone RP23-296K20 on chromosome 11, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gagccacttggatcaccatg 90 |||||||||||||||||||| Sbjct: 39237 gagccacttggatcaccatg 39256 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,119,124 Number of Sequences: 3902068 Number of extensions: 1119124 Number of successful extensions: 70174 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70125 Number of HSP's gapped (non-prelim): 49 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)