>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  127 bits (64), Expect = 2e-26
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                         
Query: 44    cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 103
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 18340

                     
Query: 104   ccgcacgg 111
             ||||||||
Sbjct: 18341 ccgcacgg 18348

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  127 bits (64), Expect = 2e-26
 Identities = 67/68 (98%)
 Strand = Plus / Minus

                                                                           
Query: 44      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 103
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798674 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7798615

                       
Query: 104     ccgcacgg 111
               ||||||||
Sbjct: 7798614 ccgcacgg 7798607

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  127 bits (64), Expect = 2e-26
 Identities = 67/68 (98%)
 Strand = Plus / Minus

                                                                           
Query: 44      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 103
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7868761 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7868702

                       
Query: 104     ccgcacgg 111
               ||||||||
Sbjct: 7868701 ccgcacgg 7868694

>ref|XM_466267.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 53  ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgt 102
           |||||||||||| |||| |||||||| ||| | || ||||||||||||||
Sbjct: 70  ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgt 119

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 53       ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgt 102
                |||||||||||| |||| |||||||| ||| | || ||||||||||||||
Sbjct: 21385077 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgt 21385126

>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 53    ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgt 102
             |||||||||||| |||| |||||||| ||| | || ||||||||||||||
Sbjct: 45030 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgt 45079

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 230     ttcggcaacccggtggccggcg 251
               ||||||||||||||||||||||
Sbjct: 1606464 ttcggcaacccggtggccggcg 1606443

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 238     cccggtggccggcgacgacgcg 259
               ||||||||||||||||||||||
Sbjct: 2281355 cccggtggccggcgacgacgcg 2281376



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    tcggcaacccggtggccggcgacg 254
              ||||| ||||||||||||||||||
Sbjct: 310706 tcggccacccggtggccggcgacg 310729

>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene
              cluster, complete sequence
          Length = 138203

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 256    cgcggtgcccgaggacgcccc 276
              |||||||||||||||||||||
Sbjct: 127017 cgcggtgcccgaggacgcccc 126997

>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome
          Length = 12079

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 232  cggcaacccggtggccggcgacgacgcgg 260
            |||| |||| |||||||||||||||||||
Sbjct: 3354 cggcgaccccgtggccggcgacgacgcgg 3326

>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    ctggtcttcctcatgcagtt 231
              ||||||||||||||||||||
Sbjct: 131615 ctggtcttcctcatgcagtt 131634

>ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain receptor protein
           SORCS 3 (LOC533349), mRNA
          Length = 1661

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 caacgaggatctggtcttcc 221
           ||||||||||||||||||||
Sbjct: 679 caacgaggatctggtcttcc 660

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     ccggtggccggcgacgacgc 258
               ||||||||||||||||||||
Sbjct: 3752895 ccggtggccggcgacgacgc 3752876

>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    cccggtggccggcgacgacg 257
              ||||||||||||||||||||
Sbjct: 270247 cccggtggccggcgacgacg 270266

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     acccggtggccggcgacgac 256
               ||||||||||||||||||||
Sbjct: 3307324 acccggtggccggcgacgac 3307305



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     ccggtggccggcgacgacgc 258
               ||||||||||||||||||||
Sbjct: 1696168 ccggtggccggcgacgacgc 1696187

>gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306,  section 337 of 469 of the
            complete genome
          Length = 11092

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  ccggtggccggcgacgacgc 258
            ||||||||||||||||||||
Sbjct: 7727 ccggtggccggcgacgacgc 7708

>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  ccgacgacgtcgccgtcgac 88
           ||||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcgac 564

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      ggatgcccgacgacgtcgcc 82
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     ggtggccggcgacgacgcgg 260
               ||||||||||||||||||||
Sbjct: 4812961 ggtggccggcgacgacgcgg 4812980

>gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the complete genome
          Length = 10179

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  cgacgcggtgcccgaggacg 272
            ||||||||||||||||||||
Sbjct: 3215 cgacgcggtgcccgaggacg 3196

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     acccggtggccggcgacgac 256
               ||||||||||||||||||||
Sbjct: 3303472 acccggtggccggcgacgac 3303453



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     ccggtggccggcgacgacgc 258
               ||||||||||||||||||||
Sbjct: 1719728 ccggtggccggcgacgacgc 1719747

>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
              sequence
          Length = 220149

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    ctggtcttcctcatgcagtt 231
              ||||||||||||||||||||
Sbjct: 106484 ctggtcttcctcatgcagtt 106503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,436,305
Number of Sequences: 3902068
Number of extensions: 1436305
Number of successful extensions: 27068
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26325
Number of HSP's gapped (non-prelim): 743
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)