| Clone Name | baet99c03 |
|---|---|
| Clone Library Name | barley_pub |
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 92.8 bits (229), Expect = 2e-19 Identities = 39/48 (81%), Positives = 43/48 (89%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSP 315 CD C++RRARWYCAADDAFLCQ CD+ VHSANPLARRHERVRL+ SP Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASP 64
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 89.4 bits (220), Expect = 2e-18 Identities = 38/47 (80%), Positives = 41/47 (87%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTS 312 CD C++RRARWYCAADDAFLC CD SVHSANPLARRHERVRL+ S Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 81.3 bits (199), Expect = 6e-16 Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 1/49 (2%) Frame = +1 Query: 172 CDGCLRR-RARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSP 315 CD C++R RA WYC ADDAFLCQ CD S+HSAN LA+RHERVRL+ +SP Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSP 70
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 67.4 bits (163), Expect = 9e-12 Identities = 29/44 (65%), Positives = 34/44 (77%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLR 303 C+ CL + A WYCA+DDAFLC CD SVHSAN +A +HERV LR Sbjct: 15 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLR 58
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 63.9 bits (154), Expect = 9e-11 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTS 312 C+ C R A + C ADDA LC CD+ VHSANPLARRH+RV + P S Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPIS 109 Score = 56.2 bits (134), Expect = 2e-08 Identities = 25/51 (49%), Positives = 30/51 (58%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C YC AD A+LC CD VHSAN +A RH+RVR+ + AP Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAP 70
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 60.5 bits (145), Expect = 1e-09 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTS 312 C C R A ++C AD A LC CD+ +HSANPLARRH+RV + P S Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPIS 101 Score = 57.8 bits (138), Expect = 7e-09 Identities = 26/51 (50%), Positives = 30/51 (58%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C YC AD A+LC CD VH+AN LA RHERVR+ + AP Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAP 62
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 57.0 bits (136), Expect = 1e-08 Identities = 25/47 (53%), Positives = 29/47 (61%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTS 312 C C A + C AD A LC CD +HSANPLARRH+RV + P S Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLS 105 Score = 55.1 bits (131), Expect = 4e-08 Identities = 25/51 (49%), Positives = 30/51 (58%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C YC AD A+LC CD VH+AN +A RHERVR+ + AP Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAP 66
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 55.1 bits (131), Expect = 4e-08 Identities = 26/51 (50%), Positives = 29/51 (56%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C A +C AD AFLC CD +H+AN LA RHERV L AP Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAP 58 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRP 306 C+ C + A C AD A LC CD +HSANPL+RRHERV + P Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITP 95
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 54.3 bits (129), Expect = 7e-08 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRP 306 C+ C + A C AD A LC CD +HSANPLARRHERV + P Sbjct: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTP 93 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/51 (49%), Positives = 28/51 (54%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C A YC D AFLC CD+ VH+AN LA RH RV + AP Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAP 56
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/51 (49%), Positives = 30/51 (58%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C +A YC +D A LC CD +VHSANPL++RH R L L P Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQP 55
>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 51.6 bits (122), Expect = 5e-07 Identities = 23/52 (44%), Positives = 30/52 (57%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAPR 327 CD C + A C AD+A LC CD +H+AN LA +H+R+ L S PR Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPR 56 Score = 42.4 bits (98), Expect = 3e-04 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C + A +C D A LC+ CD S+H AN + H+R Sbjct: 57 CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQR 96
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 51.2 bits (121), Expect = 6e-07 Identities = 22/40 (55%), Positives = 27/40 (67%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C +R+ YC +D A LC CD SVHSAN L++RH R Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR 44
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 50.8 bits (120), Expect = 8e-07 Identities = 23/41 (56%), Positives = 26/41 (63%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERV 294 C+ C + A C AD A LC CD +HSANPLA RHERV Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101 Score = 42.7 bits (99), Expect = 2e-04 Identities = 22/51 (43%), Positives = 25/51 (49%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C A +C D AFLC CDT +HS RHERV + AP Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAP 68
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 50.1 bits (118), Expect = 1e-06 Identities = 21/40 (52%), Positives = 27/40 (67%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C +R+ YC +D A LC CD +VHSAN L++RH R Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSR 44
>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540| Length = 331 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/43 (51%), Positives = 26/43 (60%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 CD C + A +C AD+A LC GCD VH AN LA +H R L Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSL 47 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 CD C ++A +C D A LC+ CD+S+H+AN ++H+R L Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/40 (55%), Positives = 25/40 (62%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C +A YC +D A LC CD VHSANPL+ RH R Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR 44
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/51 (45%), Positives = 29/51 (56%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD C + A C AD+A LC CD VH+AN LA +H+R+ L S P Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFP 55 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD CL + A +C D A LC+ CD + H+ N + H+R Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQR 96
>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600| Length = 299 Score = 48.1 bits (113), Expect = 5e-06 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAPR 327 C+ C A C AD+A LC CD +H+AN LA +H+RV L ++ P+ Sbjct: 5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPK 56 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 CD C ++C D A LC+ CD ++H+ NP H+R L Sbjct: 57 CDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLL 99
>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190| Length = 356 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/43 (53%), Positives = 25/43 (58%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 C+ C RA YC AD A LC CD VHSAN L+ RH R L Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/50 (28%), Positives = 17/50 (34%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLA 321 CD C + C FLC GC+ H R +R P A Sbjct: 57 CDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPA 106
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 CD C R A +C AD A LC CD VH+AN L+R+H R ++ Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI 51 Score = 32.7 bits (73), Expect = 0.23 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C C D+ LCQ CD VH + ++ H R Sbjct: 52 CDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVR 91
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 C+ C R A +C AD A LC CD VHSAN L+R+H R ++ Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI 54 Score = 35.8 bits (81), Expect = 0.027 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C + C D+ LCQ CD VH + + HER Sbjct: 55 CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHER 94
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 40.8 bits (94), Expect = 9e-04 Identities = 20/40 (50%), Positives = 21/40 (52%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER 291 CD C A YC AD A LC CD VH AN L +H R Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR 52 Score = 31.2 bits (69), Expect = 0.68 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSAN 267 CD C + +C + + LCQ CD H+A+ Sbjct: 56 CDSCNESPSSLFCETERSVLCQNCDWQHHTAS 87
>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog| Length = 539 Score = 34.3 bits (77), Expect = 0.080 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSP 315 CD A YC D+ LC+ C S HS N L+ +H R+ L P Sbjct: 108 CDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVLS-KHRRIPLTEKPP 154
>YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in chromosome II| Length = 250 Score = 33.9 bits (76), Expect = 0.10 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAP 324 CD A YC DA LC+ C T +HS + LA +++ P P Sbjct: 106 CDENTNHHASNYCETCDADLCEECWTWIHSISTLAHHEKKMISTPDCQFHP 156
>POLG_GBVB (Q69422) Genome polyprotein [Contains: Core protein; Envelope| glycoprotein E1; Envelope glycoprotein E2 (NS1); p13; Protease NS2-3 (EC 3.4.22.-); Serine protease/NTPase/helicase NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.1.-) (Hepacivirin) (NS3P) Length = 2864 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 324 RGQRRRRPQAHPLMPPRERVRGVHRGVAPLAQ 229 RGQR +R P ++ G+H G+ LAQ Sbjct: 36 RGQRAKRKVQRDARPRNYKIAGIHDGLQTLAQ 67
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVH 258 C GC RR R +C + LC+ C + H Sbjct: 101 CRGCGRRLPRQFCRSCGVVLCEPCREADH 129
>RGMC_HUMAN (Q6ZVN8) Hemojuvelin precursor (Hemochromatosis type 2 protein)| (RGM domain family member C) Length = 426 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = +1 Query: 181 CLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRLRPTSPLAPR 327 C RR AR C D AF ++VH L +H R PT+P PR Sbjct: 89 CTRRTART-CRGDLAF-----HSAVHGIEDLMIQHNCSRQGPTAPPPPR 131
>ZFY19_MOUSE (Q9DAZ9) Zinc finger FYVE domain-containing protein 19| Length = 389 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Frame = +1 Query: 208 CAADDAFLCQGCDTSVHSANPLARRHERVRLR--PTSPLAPR 327 C D C GCD ++ A H+ L+ TSP PR Sbjct: 342 CNEDATLRCAGCDGDLYCARCFREGHDNFDLKEHQTSPYHPR 383
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 CD A YC LC C HS LA +H RV L Sbjct: 127 CDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPL 168
>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (RING finger protein 46) Length = 574 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = +1 Query: 172 CDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHERVRL 300 CD A YC LC C HS LA +H RV L Sbjct: 127 CDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,151,209 Number of Sequences: 219361 Number of extensions: 429542 Number of successful extensions: 1514 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1514 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)