ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 224 1e-55
2dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic D... 224 1e-55
3ref|XM_467625.1| Oryza sativa (japonica cultivar-group), mRNA 167 3e-38
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 167 3e-38
5dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 167 3e-38
6dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic D... 167 3e-38
7dbj|AK120314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 3e-38
8ref|XM_469510.1| Oryza sativa (japonica cultivar-group), mRNA 143 4e-31
9gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 143 4e-31
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 4e-31
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 4e-31
12dbj|AK120563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 4e-31
13emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 44 0.28
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
16emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584... 42 1.1
17emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 42 1.1
18gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome 40 4.4
19gb|DQ157460.1| Oryza sativa (indica cultivar-group) strain Supha... 40 4.4
20gb|DQ157459.1| Oryza sativa (indica cultivar-group) strain KDML ... 40 4.4
21ref|XM_507206.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.4
22gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 4.4
23ref|NM_009623.1| Mus musculus adenylate cyclase 8 (Adcy8), mRNA 40 4.4
24gb|BC094231.1| Mus musculus adenylate cyclase 8, mRNA (cDNA clon... 40 4.4
25ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro ... 40 4.4
26gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.4
27dbj|AK138244.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 4.4
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
29dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
30dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
31dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
32dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
33dbj|AK105602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
34gb|BC059010.1| Mus musculus cDNA clone IMAGE:6844119, containing... 40 4.4
35gb|U85021.1|MMU85021 Mus musculus adenylyl cyclase type 8 mRNA, ... 40 4.4
36dbj|AB041839.1| Oryza sativa (indica cultivar-group) Hd1 gene, c... 40 4.4

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  224 bits (113), Expect = 1e-55
 Identities = 149/161 (92%)
 Strand = Plus / Plus

                                                                           
Query: 156     caaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgc 215
               |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 8715758 caagtcggcgcgggcgtgcgacggctgcctgcgccggcgggcgaggtggtactgcgcggc 8715817

                                                                           
Query: 216     ggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgc 275
               ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 8715818 ggacgacgcgttcctgtgccaggggtgcgacacgtcggtgcactccgcgaacccgctcgc 8715877

                                                        
Query: 276     gcggaggcatgagcgggtgcgcctgcggcctacgtcgccgc 316
               |||| | || |||||| |||| ||||||||  |||||||||
Sbjct: 8715878 gcggcgccacgagcggctgcggctgcggccgtcgtcgccgc 8715918



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 186      gcggcggcgggcgaggtggt 205
                ||||||||||||||||||||
Sbjct: 10626976 gcggcggcgggcgaggtggt 10626995



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>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0037N01
          Length = 174085

 Score =  224 bits (113), Expect = 1e-55
 Identities = 149/161 (92%)
 Strand = Plus / Plus

                                                                          
Query: 156    caaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgc 215
              |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 130740 caagtcggcgcgggcgtgcgacggctgcctgcgccggcgggcgaggtggtactgcgcggc 130799

                                                                          
Query: 216    ggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgc 275
              ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 130800 ggacgacgcgttcctgtgccaggggtgcgacacgtcggtgcactccgcgaacccgctcgc 130859

                                                       
Query: 276    gcggaggcatgagcgggtgcgcctgcggcctacgtcgccgc 316
              |||| | || |||||| |||| ||||||||  |||||||||
Sbjct: 130860 gcggcgccacgagcggctgcggctgcggccgtcgtcgccgc 130900



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>ref|XM_467625.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1942

 Score =  167 bits (84), Expect = 3e-38
 Identities = 132/148 (89%)
 Strand = Plus / Plus

                                                                       
Query: 155 gcaaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccg 214
           ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 114 gcaaggcggcgcgcgcgtgcgacagctgcctgcggcggcgggcgcggtggtactgcgcgg 173

                                                                       
Query: 215 cggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcg 274
           |||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 174 cggatgacgccttcctgtgccaggggtgcgacacgtcggtgcactcggccaacccgctcg 233

                                       
Query: 275 cgcggaggcatgagcgggtgcgcctgcg 302
           |  || |||| |||||  ||||||||||
Sbjct: 234 ccaggcggcacgagcgcctgcgcctgcg 261



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  167 bits (84), Expect = 3e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                            
Query: 155      gcaaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccg 214
                ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 30494154 gcaaggcggcgcgcgcgtgcgacagctgcctgcggcggcgggcgcggtggtactgcgcgg 30494095

                                                                            
Query: 215      cggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcg 274
                |||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 30494094 cggatgacgccttcctgtgccaggggtgcgacacgtcggtgcactcggccaacccgctcg 30494035

                                            
Query: 275      cgcggaggcatgagcgggtgcgcctgcg 302
                |  || |||| |||||  ||||||||||
Sbjct: 30494034 ccaggcggcacgagcgcctgcgcctgcg 30494007



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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0643A10
          Length = 187931

 Score =  167 bits (84), Expect = 3e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 155  gcaaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccg 214
            ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 6162 gcaaggcggcgcgcgcgtgcgacagctgcctgcggcggcgggcgcggtggtactgcgcgg 6103

                                                                        
Query: 215  cggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcg 274
            |||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 6102 cggatgacgccttcctgtgccaggggtgcgacacgtcggtgcactcggccaacccgctcg 6043

                                        
Query: 275  cgcggaggcatgagcgggtgcgcctgcg 302
            |  || |||| |||||  ||||||||||
Sbjct: 6042 ccaggcggcacgagcgcctgcgcctgcg 6015



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>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0617A09
          Length = 134804

 Score =  167 bits (84), Expect = 3e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                          
Query: 155    gcaaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccg 214
              ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 100202 gcaaggcggcgcgcgcgtgcgacagctgcctgcggcggcgggcgcggtggtactgcgcgg 100143

                                                                          
Query: 215    cggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcg 274
              |||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 100142 cggatgacgccttcctgtgccaggggtgcgacacgtcggtgcactcggccaacccgctcg 100083

                                          
Query: 275    cgcggaggcatgagcgggtgcgcctgcg 302
              |  || |||| |||||  ||||||||||
Sbjct: 100082 ccaggcggcacgagcgcctgcgcctgcg 100055



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>dbj|AK120314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L13, full
           insert sequence
          Length = 1941

 Score =  167 bits (84), Expect = 3e-38
 Identities = 132/148 (89%)
 Strand = Plus / Plus

                                                                       
Query: 155 gcaaggcggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccg 214
           ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 114 gcaaggcggcgcgcgcgtgcgacagctgcctgcggcggcgggcgcggtggtactgcgcgg 173

                                                                       
Query: 215 cggacgacgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcg 274
           |||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 174 cggatgacgccttcctgtgccaggggtgcgacacgtcggtgcactcggccaacccgctcg 233

                                       
Query: 275 cgcggaggcatgagcgggtgcgcctgcg 302
           |  || |||| |||||  ||||||||||
Sbjct: 234 ccaggcggcacgagcgcctgcgcctgcg 261



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>ref|XM_469510.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1266

 Score =  143 bits (72), Expect = 4e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                       
Query: 161 cggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgcggacg 220
           ||||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 47  cggcgcgggcgtgcgacgggtgcatgcggcggcgggcgcggtggcactgccccgcggacg 106

                                                                       
Query: 221 acgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgcgcgga 280
           |||||||||||||||||| ||||||| | || |||||||| |||||||| || |||||| 
Sbjct: 107 acgcgttcctgtgccaggcgtgcgacgcgtccgtgcactcggcgaacccgctggcgcggc 166

               
Query: 281 ggca 284
           ||||
Sbjct: 167 ggca 170



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>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
             map R1538, complete sequence
          Length = 142712

 Score =  143 bits (72), Expect = 4e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                         
Query: 161   cggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgcggacg 220
             ||||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 20891 cggcgcgggcgtgcgacgggtgcatgcggcggcgggcgcggtggcactgccccgcggacg 20832

                                                                         
Query: 221   acgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgcgcgga 280
             |||||||||||||||||| ||||||| | || |||||||| |||||||| || |||||| 
Sbjct: 20831 acgcgttcctgtgccaggcgtgcgacgcgtccgtgcactcggcgaacccgctggcgcggc 20772

                 
Query: 281   ggca 284
             ||||
Sbjct: 20771 ggca 20768



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 4e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                            
Query: 161      cggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgcggacg 220
                ||||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 28392151 cggcgcgggcgtgcgacgggtgcatgcggcggcgggcgcggtggcactgccccgcggacg 28392210

                                                                            
Query: 221      acgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgcgcgga 280
                |||||||||||||||||| ||||||| | || |||||||| |||||||| || |||||| 
Sbjct: 28392211 acgcgttcctgtgccaggcgtgcgacgcgtccgtgcactcggcgaacccgctggcgcggc 28392270

                    
Query: 281      ggca 284
                ||||
Sbjct: 28392271 ggca 28392274



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 160      gcggcgcgggcgtgcgacggctgc 183
                ||||||| ||||||||||||||||
Sbjct: 14122938 gcggcgcaggcgtgcgacggctgc 14122915



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 4e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                            
Query: 161      cggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgcggacg 220
                ||||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 28483475 cggcgcgggcgtgcgacgggtgcatgcggcggcgggcgcggtggcactgccccgcggacg 28483534

                                                                            
Query: 221      acgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgcgcgga 280
                |||||||||||||||||| ||||||| | || |||||||| |||||||| || |||||| 
Sbjct: 28483535 acgcgttcctgtgccaggcgtgcgacgcgtccgtgcactcggcgaacccgctggcgcggc 28483594

                    
Query: 281      ggca 284
                ||||
Sbjct: 28483595 ggca 28483598



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 160      gcggcgcgggcgtgcgacggctgc 183
                ||||||| ||||||||||||||||
Sbjct: 14117913 gcggcgcaggcgtgcgacggctgc 14117890



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>dbj|AK120563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132M18, full
           insert sequence
          Length = 1841

 Score =  143 bits (72), Expect = 4e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                       
Query: 161 cggcgcgggcgtgcgacggctgcctgcggcggcgggcgaggtggtactgcgccgcggacg 220
           ||||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 123 cggcgcgggcgtgcgacgggtgcatgcggcggcgggcgcggtggcactgccccgcggacg 182

                                                                       
Query: 221 acgcgttcctgtgccaggggtgcgacacctcggtgcactccgcgaaccctctcgcgcgga 280
           |||||||||||||||||| ||||||| | || |||||||| |||||||| || |||||| 
Sbjct: 183 acgcgttcctgtgccaggcgtgcgacgcgtccgtgcactcggcgaacccgctggcgcggc 242

               
Query: 281 ggca 284
           ||||
Sbjct: 243 ggca 246



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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 122    cggggaaggccgcggcggacgg 143
              ||||||||||||||||||||||
Sbjct: 244245 cggggaaggccgcggcggacgg 244266



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 184      ctgcggcggcgggcgaggtgg 204
                |||||||||||||||||||||
Sbjct: 27077813 ctgcggcggcgggcgaggtgg 27077833



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 184      ctgcggcggcgggcgaggtgg 204
                |||||||||||||||||||||
Sbjct: 27003407 ctgcggcggcgggcgaggtgg 27003427



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>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131300

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   ctgcggcggcgggcgaggtgg 204
             |||||||||||||||||||||
Sbjct: 78424 ctgcggcggcgggcgaggtgg 78404



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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   ctgcggcggcgggcgaggtgg 204
             |||||||||||||||||||||
Sbjct: 16706 ctgcggcggcgggcgaggtgg 16726



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>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome
          Length = 1469720

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    gcggcggcgggcgaggtggtactg 209
              ||||||||||||| ||||||||||
Sbjct: 124206 gcggcggcgggcggggtggtactg 124229



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>gb|DQ157460.1| Oryza sativa (indica cultivar-group) strain Suphan Buri 1 Hd1 gene,
            complete cds
          Length = 4717

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 252  ggtgcactccgcgaaccctctcgc 275
            |||||||||||||||||| |||||
Sbjct: 1626 ggtgcactccgcgaacccgctcgc 1649



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>gb|DQ157459.1| Oryza sativa (indica cultivar-group) strain KDML 105 Hd1 gene,
            complete cds
          Length = 4716

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 252  ggtgcactccgcgaaccctctcgc 275
            |||||||||||||||||| |||||
Sbjct: 1626 ggtgcactccgcgaacccgctcgc 1649



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>ref|XM_507206.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0091C18.36
           patrial mRNA
          Length = 2514

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 aggccgcggcggacggcgcc 147
           ||||||||||||||||||||
Sbjct: 437 aggccgcggcggacggcgcc 456



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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    gccgcggcggacggcgccat 149
              ||||||||||||||||||||
Sbjct: 221451 gccgcggcggacggcgccat 221432



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>ref|NM_009623.1| Mus musculus adenylate cyclase 8 (Adcy8), mRNA
          Length = 4901

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  tttgatgagctgctcgggga 127
            ||||||||||||||||||||
Sbjct: 4097 tttgatgagctgctcgggga 4116



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>gb|BC094231.1| Mus musculus adenylate cyclase 8, mRNA (cDNA clone IMAGE:30535346)
          Length = 4502

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  tttgatgagctgctcgggga 127
            ||||||||||||||||||||
Sbjct: 3675 tttgatgagctgctcgggga 3694



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>ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro (LOC475398), mRNA
          Length = 5341

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  cgtcgccgctggccccgcgg 327
            ||||||||||||||||||||
Sbjct: 3218 cgtcgccgctggccccgcgg 3199



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>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0022F22, from chromosome 3, complete sequence
          Length = 144268

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    gcggcgcgggcgtgcgacggctgc 183
              ||||||| ||||||||||||||||
Sbjct: 132617 gcggcgcaggcgtgcgacggctgc 132594



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>dbj|AK138244.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230044D13 product:adenylate cyclase 8,
            full insert sequence
          Length = 4574

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  tttgatgagctgctcgggga 127
            ||||||||||||||||||||
Sbjct: 4148 tttgatgagctgctcgggga 4167



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      aggccgcggcggacggcgcc 147
                ||||||||||||||||||||
Sbjct: 17192504 aggccgcggcggacggcgcc 17192523



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>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1066D09
          Length = 183999

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    gcggcggcgggcgaggtggt 205
              ||||||||||||||||||||
Sbjct: 163683 gcggcggcgggcgaggtggt 163702



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>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091C18
          Length = 154416

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    aggccgcggcggacggcgcc 147
              ||||||||||||||||||||
Sbjct: 116359 aggccgcggcggacggcgcc 116378



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>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aggccgcggcggacggcgcc 147
             ||||||||||||||||||||
Sbjct: 53129 aggccgcggcggacggcgcc 53148



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>dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E04, full
           insert sequence
          Length = 2836

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 gcggcggcgggcgaggtggt 205
           ||||||||||||||||||||
Sbjct: 615 gcggcggcgggcgaggtggt 596



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>dbj|AK105602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A07, full
           insert sequence
          Length = 2514

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 aggccgcggcggacggcgcc 147
           ||||||||||||||||||||
Sbjct: 437 aggccgcggcggacggcgcc 456



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>gb|BC059010.1| Mus musculus cDNA clone IMAGE:6844119, containing frame-shift errors
          Length = 4149

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  tttgatgagctgctcgggga 127
            ||||||||||||||||||||
Sbjct: 3334 tttgatgagctgctcgggga 3353



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>gb|U85021.1|MMU85021 Mus musculus adenylyl cyclase type 8 mRNA, complete cds
          Length = 4901

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  tttgatgagctgctcgggga 127
            ||||||||||||||||||||
Sbjct: 4097 tttgatgagctgctcgggga 4116



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>dbj|AB041839.1| Oryza sativa (indica cultivar-group) Hd1 gene, complete cds,
            strain:Kasalath
          Length = 4793

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 252  ggtgcactccgcgaaccctctcgc 275
            |||||||||||||||||| |||||
Sbjct: 1615 ggtgcactccgcgaacccgctcgc 1638


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,108,842
Number of Sequences: 3902068
Number of extensions: 2108842
Number of successful extensions: 47076
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46685
Number of HSP's gapped (non-prelim): 391
length of query: 330
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 308
effective length of database: 17,147,199,772
effective search space: 5281337529776
effective search space used: 5281337529776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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