| Clone Name | baet99b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 27264051 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 27264110 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 27264111 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 27264170 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 27264171 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 27264230 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 27264231 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 27264290 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 27264291 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 27264350 Query: 308 atcgccg 314 ||||||| Sbjct: 27264351 atcgccg 27264357
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 114722 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 114781 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 114782 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 114841 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 114842 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 114901 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 114902 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 114961 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 114962 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 115021 Query: 308 atcgccg 314 ||||||| Sbjct: 115022 atcgccg 115028
>dbj|AK119517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C05, full insert sequence Length = 2055 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 716 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 775 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 776 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 835 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 836 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 895 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 896 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 955 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 956 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 1015 Query: 308 atcgccg 314 ||||||| Sbjct: 1016 atcgccg 1022
>dbj|AK100650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D06, full insert sequence Length = 2089 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 713 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 772 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 773 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 832 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 833 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 892 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 893 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 952 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 953 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 1012 Query: 308 atcgccg 314 ||||||| Sbjct: 1013 atcgccg 1019
>dbj|AK100585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B08, full insert sequence Length = 2977 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1774 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 1833 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 1834 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 1893 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 1894 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 1953 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 1954 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 2013 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 2014 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 2073 Query: 308 atcgccg 314 ||||||| Sbjct: 2074 atcgccg 2080
>dbj|AK064827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F07, full insert sequence Length = 1984 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 712 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 771 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 772 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 831 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 832 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 891 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 892 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 951 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 952 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 1011 Query: 308 atcgccg 314 ||||||| Sbjct: 1012 atcgccg 1018
>dbj|AK061743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F02, full insert sequence Length = 1756 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 716 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 775 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 776 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 835 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 836 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 895 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 896 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 955 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 956 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 1015 Query: 308 atcgccg 314 ||||||| Sbjct: 1016 atcgccg 1022
>dbj|AK061649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C02, full insert sequence Length = 1697 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 339 gccatgctgccgttccagctcgggctcaactccatcaagacgctgacgctcctcgcgccg 398 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggac 127 ||||||||||||||||| || || ||||||||||||||||| |||||| | || ||||| Sbjct: 399 ctcagcatcttcgccgatgtggttgacctcggcgccatgggcgtcgttctcggggaggac 458 Query: 128 gtgtcgacctggctcgccgcacatccacccgtcgtcgcgttcggcgcccccgccgcgctc 187 ||||| |||||||||| || ||||||||| |||| ||||||| || |||| || Sbjct: 459 gtgtccgtctggctcgccaaaccaccacccgtcttcgccttcggcggcctgagcgcgatc 518 Query: 188 ctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctg 247 || |||||| | |||||||||||||||||||||||||| || | |||||||| ||||| Sbjct: 519 ctgtacggcatcggcgtgtccgtgtacgccttcgagggaatcggcatggtccttccgctt 578 Query: 248 gaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgttc 307 |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| Sbjct: 579 gaggcggaggccgccaacaagaagaagttcgggaccacgctcgggctatccatggggttc 638 Query: 308 atcgccg 314 ||||||| Sbjct: 639 atcgccg 645
>ref|XM_473523.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 10 catgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccgct 69 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 501 catgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgct 560 Query: 70 cagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggacgt 129 |||||||||||||||||||||||| |||||||||||||| ||||| | || |||||||| Sbjct: 561 cagcatcttcgccgacgtcgtcgatctcggcgccatgggcgtcgtcctcggccaggacgt 620 Query: 130 gtcgacctggctcgcc 145 ||| |||||||||||| Sbjct: 621 gtccacctggctcgcc 636 Score = 121 bits (61), Expect = 1e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 186 tcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgc 245 ||||||||||| | ||||| |||| || |||||||||||| || | |||||||| |||| Sbjct: 677 tcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgc 736 Query: 246 tggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgt 305 ||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 737 tggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgt 796 Query: 306 tcatcgccg 314 ||||||||| Sbjct: 797 tcatcgccg 805
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Minus Query: 10 catgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccgct 69 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 28315930 catgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgct 28315871 Query: 70 cagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggacgt 129 |||||||||||||||||||||||| |||||||||||||| ||||| | || |||||||| Sbjct: 28315870 cagcatcttcgccgacgtcgtcgatctcggcgccatgggcgtcgtcctcggccaggacgt 28315811 Query: 130 gtcgacctggctcgcc 145 ||| |||||||||||| Sbjct: 28315810 gtccacctggctcgcc 28315795 Score = 121 bits (61), Expect = 1e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 186 tcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgc 245 ||||||||||| | ||||| |||| || |||||||||||| || | |||||||| |||| Sbjct: 28315754 tcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgc 28315695 Query: 246 tggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgt 305 ||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 28315694 tggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgt 28315635 Query: 306 tcatcgccg 314 ||||||||| Sbjct: 28315634 tcatcgccg 28315626
>dbj|AK105902.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F10, full insert sequence Length = 1500 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 10 catgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccgct 69 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 616 catgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgct 675 Query: 70 cagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggacgt 129 |||||||||||||||||||||||| |||||||||||||| ||||| | || |||||||| Sbjct: 676 cagcatcttcgccgacgtcgtcgatctcggcgccatgggcgtcgtcctcggccaggacgt 735 Query: 130 gtcgacctggctcgcc 145 ||| |||||||||||| Sbjct: 736 gtccacctggctcgcc 751 Score = 121 bits (61), Expect = 1e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 186 tcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgc 245 ||||||||||| | ||||| |||| || |||||||||||| || | |||||||| |||| Sbjct: 792 tcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgc 851 Query: 246 tggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgt 305 ||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 852 tggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgt 911 Query: 306 tcatcgccg 314 ||||||||| Sbjct: 912 tcatcgccg 920
>dbj|AK071118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082L01, full insert sequence Length = 1514 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 10 catgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccgct 69 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 614 catgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgct 673 Query: 70 cagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggacgt 129 |||||||||||||||||||||||| |||||||||||||| ||||| | || |||||||| Sbjct: 674 cagcatcttcgccgacgtcgtcgatctcggcgccatgggcgtcgtcctcggccaggacgt 733 Query: 130 gtcgacctggctcgcc 145 ||| |||||||||||| Sbjct: 734 gtccacctggctcgcc 749 Score = 121 bits (61), Expect = 1e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 186 tcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgc 245 ||||||||||| | ||||| |||| || |||||||||||| || | |||||||| |||| Sbjct: 790 tcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgc 849 Query: 246 tggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgt 305 ||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 850 tggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgt 909 Query: 306 tcatcgccg 314 ||||||||| Sbjct: 910 tcatcgccg 918
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Minus Query: 10 catgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccgct 69 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 108238 catgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgct 108179 Query: 70 cagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgttgttggacaggacgt 129 |||||||||||||||||||||||| |||||||||||||| ||||| | || |||||||| Sbjct: 108178 cagcatcttcgccgacgtcgtcgatctcggcgccatgggcgtcgtcctcggccaggacgt 108119 Query: 130 gtcgacctggctcgcc 145 ||| |||||||||||| Sbjct: 108118 gtccacctggctcgcc 108103 Score = 121 bits (61), Expect = 1e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 186 tcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgc 245 ||||||||||| | ||||| |||| || |||||||||||| || | |||||||| |||| Sbjct: 108062 tcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgc 108003 Query: 246 tggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgt 305 ||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 108002 tggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgt 107943 Query: 306 tcatcgccg 314 ||||||||| Sbjct: 107942 tcatcgccg 107934
>gb|BT024022.1| Zea mays clone EL01N0413F11 mRNA sequence Length = 1762 Score = 172 bits (87), Expect = 4e-40 Identities = 102/107 (95%) Strand = Plus / Plus Query: 8 gccatgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccg 67 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 599 gccatgctgccgttccagctcggcctcaactccatcaggacgctcacgctcctcgcgccg 658 Query: 68 ctcagcatcttcgccgacgtcgtcgacctcggcgccatgggggtcgt 114 |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 659 ctcagcatcttcgcagacgtcgttgacctcggcgccatgggcgtcgt 705 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 175 ccccgccgcgctcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtat 234 ||||||| ||||||||||||| | ||||| |||| ||||||||||||||| || | || Sbjct: 766 ccccgcccagctcctctacggcctcggcgtcgccgtctacgccttcgagggcatcggcat 825 Query: 235 ggtcctgccgctggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggct 294 ||||||||||||||||||||||||||| |||||| | ||||||||||| ||||| ||| Sbjct: 826 ggtcctgccgctggaggcggaggccgccgacaagcgcaggttcggcgccaagctcgcgct 885 Query: 295 gtccatggcgttcatcgccg 314 ||||||| |||||||||||| Sbjct: 886 gtccatgacgttcatcgccg 905
>gb|AY109638.1| Zea mays CL25119_1 mRNA sequence Length = 1009 Score = 139 bits (70), Expect = 6e-30 Identities = 100/110 (90%) Strand = Plus / Minus Query: 205 gtccgtgtacgccttcgagggcgtctgtatggtcctgccgctggaggcggaggccgcgga 264 |||||||||||| ||||||||| || | ||||| |||||||||||||||||||| ||| | Sbjct: 797 gtccgtgtacgcgttcgagggcatcggcatggtgctgccgctggaggcggaggcggcgaa 738 Query: 265 caagaagaagttcggcgccacgctcgggctgtccatggcgttcatcgccg 314 ||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 737 caagagcaagttcggcgtcacgctcgggctgtccatggcgttcatcgccg 688 Score = 81.8 bits (41), Expect = 1e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 53 acgctcctcgcgccgctcagcatcttcgccgacgtcgtcgacctcggcgccatggg 108 ||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 947 acgctgcttgcgccgctcagcatcttcgccgacgncgttgacctcggcgccatggg 892
>dbj|AK058888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C11, full insert sequence Length = 1405 Score = 123 bits (62), Expect = 4e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 10 catgctgccgttccagctcgggctcaactccatcaagacgctcacgctcctcgcgccgct 69 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 611 catgctgccgttccagctggggcttaactccatcaagacgctgacgctcctcgcgccgct 670 Query: 70 cagcatcttcgccg 83 |||||||||||||| Sbjct: 671 cagcatcttcgccg 684 Score = 121 bits (61), Expect = 1e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 186 tcctctacggcgtgggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgc 245 ||||||||||| | ||||| |||| || |||||||||||| || | |||||||| |||| Sbjct: 697 tcctctacggcctcggcgtcgccgtctatgccttcgagggcatcggcatggtcctcccgc 756 Query: 246 tggaggcggaggccgcggacaagaagaagttcggcgccacgctcgggctgtccatggcgt 305 ||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 757 tggaggccgaggccgccgacaagcgcaagttcggcggcacgctcgcgctgtccatggcgt 816 Query: 306 tcatcgccg 314 ||||||||| Sbjct: 817 tcatcgccg 825
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 97.6 bits (49), Expect = 2e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 24 agctcgggctcaactccatcaagacgctcacgctcctcgcgccgctcagcatcttcgccg 83 ||||| |||||||||||||||||||||| |||||||||| ||| |||||||| ||||||| Sbjct: 64771 agctcaggctcaactccatcaagacgctgacgctcctcgtgccactcagcatattcgccg 64712 Query: 84 acgtcgtcgacctcggcgccatggg 108 | || || |||||||||||| |||| Sbjct: 64711 atgtggttgacctcggcgccgtggg 64687 Score = 83.8 bits (42), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 200 ggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctggaggcggaggcc 259 |||||||| |||||||| |||||||| || | ||||||| ||||| |||||||||||| Sbjct: 64595 ggcgtgtctgtgtacgctttcgagggattcggcatggtccatccgcttgaggcggaggcc 64536 Query: 260 gcggacaagaagaagttcggcg--ccacgctcgggctgtccatgg 302 || ||||||||||||| |||| ||||||||||||| ||||||| Sbjct: 64535 gccaacaagaagaagttgggcgcaccacgctcgggctatccatgg 64491
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 2e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 24 agctcgggctcaactccatcaagacgctcacgctcctcgcgccgctcagcatcttcgccg 83 ||||| |||||||||||||||||||||| |||||||||| ||| |||||||| ||||||| Sbjct: 28429847 agctcaggctcaactccatcaagacgctgacgctcctcgtgccactcagcatattcgccg 28429788 Query: 84 acgtcgtcgacctcggcgccatggg 108 | || || |||||||||||| |||| Sbjct: 28429787 atgtggttgacctcggcgccgtggg 28429763 Score = 83.8 bits (42), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 200 ggcgtgtccgtgtacgccttcgagggcgtctgtatggtcctgccgctggaggcggaggcc 259 |||||||| |||||||| |||||||| || | ||||||| ||||| |||||||||||| Sbjct: 28429671 ggcgtgtctgtgtacgctttcgagggattcggcatggtccatccgcttgaggcggaggcc 28429612 Query: 260 gcggacaagaagaagttcggcg--ccacgctcgggctgtccatgg 302 || ||||||||||||| |||| ||||||||||||| ||||||| Sbjct: 28429611 gccaacaagaagaagttgggcgcaccacgctcgggctatccatgg 28429567 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cgctggaggcggaggccgcgg 263 ||||||||||||||||||||| Sbjct: 28776619 cgctggaggcggaggccgcgg 28776639
>gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (kn1) gene, complete cds Length = 22402 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 269 aagaagttcggcgccacgctcgggctgtccatggcgttcatcg 311 ||||||||||||| |||||| || |||||||||| |||||||| Sbjct: 15706 aagaagttcggcgtcacgcttggactgtccatggtgttcatcg 15664
>ref|NM_193298.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 78 tcgccgacgtcgtcgacctcggcg 101 |||||||||||||||||||||||| Sbjct: 110 tcgccgacgtcgtcgacctcggcg 133
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 78 tcgccgacgtcgtcgacctcggcg 101 |||||||||||||||||||||||| Sbjct: 19968302 tcgccgacgtcgtcgacctcggcg 19968325
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 78 tcgccgacgtcgtcgacctcggcg 101 |||||||||||||||||||||||| Sbjct: 71211 tcgccgacgtcgtcgacctcggcg 71234
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 46.1 bits (23), Expect = 0.068 Identities = 29/31 (93%) Strand = Plus / Plus Query: 244 gctggaggcggaggccgcggacaagaagaag 274 |||||||||||||||||||| |||| ||||| Sbjct: 1782601 gctggaggcggaggccgcggccaaggagaag 1782631
>ref|NM_212415.1| Eremothecium gossypii AFR731Wp (AFR731W), mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.068 Identities = 29/31 (93%) Strand = Plus / Plus Query: 244 gctggaggcggaggccgcggacaagaagaag 274 |||||||||||||||||||| |||| ||||| Sbjct: 321 gctggaggcggaggccgcggccaaggagaag 351
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 95 ctcggcgccatgggggtcgttgttgg 120 |||||||||||||| ||||||||||| Sbjct: 1983654 ctcggcgccatgggcgtcgttgttgg 1983629
>ref|XM_528253.1| PREDICTED: Pan troglodytes LOC472883 (LOC472883), mRNA Length = 4998 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 gccgctggaggcggaggccgcg 262 |||||||||||||||||||||| Sbjct: 1388 gccgctggaggcggaggccgcg 1409
>gb|DQ479919.1| Mus musculus strain BTBR T+ tf/J alpha-2 adrenergic receptor (Adra2a) gene, complete cds Length = 2631 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 2265 ggcgcccccgccgcgctcctct 2244
>ref|NM_007417.2| Mus musculus adrenergic receptor, alpha 2a (Adra2a), mRNA Length = 3750 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 2098 ggcgcccccgccgcgctcctct 2077
>dbj|AK140461.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830040P15 product:adrenergic receptor, alpha 2a, full insert sequence Length = 3593 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 1943 ggcgcccccgccgcgctcctct 1922
>dbj|AK141573.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630032H01 product:adrenergic receptor, alpha 2a, full insert sequence Length = 3754 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 2102 ggcgcccccgccgcgctcctct 2081
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 cagcatcttcgccgacgtcgtc 91 |||||||||||||||||||||| Sbjct: 4776733 cagcatcttcgccgacgtcgtc 4776712
>dbj|AK046802.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830011M21 product:ALPHA-2A ADRENERGIC RECEPTOR (ALPHA-2A ADRENOCEPTOR) (ALPHA-2AAR), full insert sequence Length = 3594 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 1944 ggcgcccccgccgcgctcctct 1923
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 cgggctgtccatggcgttcatc 310 |||||||||||||||||||||| Sbjct: 2018471 cgggctgtccatggcgttcatc 2018450
>gb|AC113491.17| Mus musculus chromosome 19, clone RP23-358H2, complete sequence Length = 211604 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 146297 ggcgcccccgccgcgctcctct 146318
>gb|M99377.1|MUSALP2ADB Mouse alpha-2 adrenergic receptor, complete cds Length = 1454 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 ggcgcccccgccgcgctcctct 191 |||||||||||||||||||||| Sbjct: 1121 ggcgcccccgccgcgctcctct 1100
>ref|XM_475951.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cgctggaggcggaggccgcgg 263 ||||||||||||||||||||| Sbjct: 851 cgctggaggcggaggccgcgg 871
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cgctggaggcggaggccgcgg 263 ||||||||||||||||||||| Sbjct: 95332 cgctggaggcggaggccgcgg 95352
>ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA (LOC409729), mRNA Length = 7938 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 gaggcggaggccgcggacaag 268 ||||||||||||||||||||| Sbjct: 3229 gaggcggaggccgcggacaag 3249
>dbj|AK070825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064P05, full insert sequence Length = 1575 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cgctggaggcggaggccgcgg 263 ||||||||||||||||||||| Sbjct: 974 cgctggaggcggaggccgcgg 994
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 cgctggaggcggaggccgcgg 263 ||||||||||||||||||||| Sbjct: 96848 cgctggaggcggaggccgcgg 96828
>ref|NM_119987.2| Arabidopsis thaliana amino acid permease/ amino acid transporter AT4G38250 mRNA, complete cds Length = 1834 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 699 atcaagacgctcactcacttggctcctctcagcatcttcgccga 742
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 ggcgccacgctcgggctgtccatg 301 |||||||||||||||||| ||||| Sbjct: 670391 ggcgccacgctcgggctggccatg 670368
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tcgccgacgtcgtcgacctcggcg 101 |||||||||||||| ||||||||| Sbjct: 1295715 tcgccgacgtcgtctacctcggcg 1295692
>gb|BT016426.1| Zea mays clone Contig259 mRNA sequence Length = 643 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcggacaagaagaagttcgg 279 |||||||||||||||||||| Sbjct: 204 gcggacaagaagaagttcgg 223
>ref|XM_756534.1| Ustilago maydis 521 hypothetical protein (UM05480.1) partial mRNA Length = 3822 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgccgacgtcgtcgacctcg 98 |||||||||||||||||||| Sbjct: 885 cgccgacgtcgtcgacctcg 904
>gb|AY354531.1| Hepatitis C virus isolate Arg49 non-structural 5 gene, partial cds Length = 449 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cgttccagctcgggctcaac 37 |||||||||||||||||||| Sbjct: 36 cgttccagctcgggctcaac 55
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tcgggctgtccatggcgttcatcg 311 |||||||||||||| ||||||||| Sbjct: 1794161 tcgggctgtccatgtcgttcatcg 1794138
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 45041 atcaagacgctcactcacttggctcctctcagcatcttcgccga 45084
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA project) Length = 93760 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 4084 atcaagacgctcactcacttggctcctctcagcatcttcgccga 4127
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 124118 atcaagacgctcactcacttggctcctctcagcatcttcgccga 124161
>emb|AJ876407.1| Tribolium castaneum mRNA for phosphatase Length = 1773 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 21 tccagctcgggctcaactccatcaagacgctc 52 |||||||| | |||||||||||||||| |||| Sbjct: 80 tccagctccgactcaactccatcaagaagctc 111
>gb|AY133541.1| Arabidopsis thaliana At4g38250/F22I13_20 mRNA, complete cds Length = 1311 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 568 atcaagacgctcactcacttggctcctctcagcatcttcgccga 611
>gb|AF247667.1|AF247667 Methylococcus capsulatus surface-associated protein precursor (mopE) gene, complete cds; and UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase-like protein (lpxD) gene, partial cds Length = 2641 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 caagaagaagttcggcgcca 284 |||||||||||||||||||| Sbjct: 374 caagaagaagttcggcgcca 393
>gb|AY050451.1| Arabidopsis thaliana AT4g38250/F22I13_20 mRNA, complete cds Length = 1588 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 699 atcaagacgctcactcacttggctcctctcagcatcttcgccga 742
>ref|NM_001039436.1| Tribolium castaneum regulatory subunit A of protein phosphatase 2, alpha isoform (ppp2r1a), mRNA Length = 1773 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 21 tccagctcgggctcaactccatcaagacgctc 52 |||||||| | |||||||||||||||| |||| Sbjct: 80 tccagctccgactcaactccatcaagaagctc 111
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 caagaagaagttcggcgcca 284 |||||||||||||||||||| Sbjct: 2774239 caagaagaagttcggcgcca 2774220
>emb|BX828051.1|CNS0A4FB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1620 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 679 atcaagacgctcactcacttggctcctctcagcatcttcgccga 722
>emb|BX828060.1|CNS0A49U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 668 atcaagacgctcactcacttggctcctctcagcatcttcgccga 711
>emb|BX828475.1|CNS0A3DB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1582 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 662 atcaagacgctcactcacttggctcctctcagcatcttcgccga 705
>emb|BX826815.1|CNS0A37L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZH03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 678 atcaagacgctcactcacttggctcctctcagcatcttcgccga 721
>emb|BX827957.1|CNS0A2WP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1518 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 667 atcaagacgctcactcacttggctcctctcagcatcttcgccga 710
>emb|BX827846.1|CNS0A326 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1507 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 610 atcaagacgctcactcacttggctcctctcagcatcttcgccga 653
>emb|BX826502.1|CNS0A2BC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1376 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 573 atcaagacgctcactcacttggctcctctcagcatcttcgccga 616
>gb|AY087791.1| Arabidopsis thaliana clone 38432 mRNA, complete sequence Length = 1549 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 41 atcaagacgctcacgctcctcgcgccgctcagcatcttcgccga 84 |||||||||||||| | | | || || ||||||||||||||||| Sbjct: 667 atcaagacgctcactcacttggctcctctcagcatcttcgccga 710
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgtcgacctcggcgccatgg 107 |||||||||||||||||||| Sbjct: 1149106 cgtcgacctcggcgccatgg 1149125
>gb|AY104566.1| Zea mays PCO130617 mRNA sequence Length = 1029 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcggacaagaagaagttcgg 279 |||||||||||||||||||| Sbjct: 493 gcggacaagaagaagttcgg 512
>dbj|AB014908.1| Brevundimonas vesicularis gyrB gene for DNA gyrase subunit B, partial cds, clone:gy10021.icb Length = 1191 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 acggcgtgggcgtgtccgtg 211 |||||||||||||||||||| Sbjct: 26 acggcgtgggcgtgtccgtg 45
>dbj|AB014907.1| Brevundimonas diminuta gyrB gene for DNA gyrase subunit B, partial cds, clone:gy10020.icb Length = 1197 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 acggcgtgggcgtgtccgtg 211 |||||||||||||||||||| Sbjct: 32 acggcgtgggcgtgtccgtg 51 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,825,331 Number of Sequences: 3902068 Number of extensions: 1825331 Number of successful extensions: 42258 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41534 Number of HSP's gapped (non-prelim): 714 length of query: 318 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 296 effective length of database: 17,147,199,772 effective search space: 5075571132512 effective search space used: 5075571132512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)