ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein poste... 32 0.87
2PHK_LACLA (Q9CFH4) Probable phosphoketolase (EC 4.1.2.-) 30 3.3
3AMPN_MOUSE (P97449) Aminopeptidase N (EC 3.4.11.2) (mAPN) (Alany... 29 4.3
4PPCK_SULTO (Q972S7) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 28 7.4
5SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1... 28 9.7
6MAPE_HUMAN (P78395) Melanoma antigen preferentially expressed in... 28 9.7
7GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor 28 9.7

>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex|
           combs)
          Length = 1368

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
 Frame = +1

Query: 190 CEVLDSFSESVEDLAMISSISLLDSSHQLIQKLYRKCWPSNSNSK---LNMHATAKSGGK 360
           C    + S S    A  S+ +   SSH+  +K + K  P ++N K   L+   ++++ GK
Sbjct: 471 CSSSTNGSSSSLGTADASTSTSTSSSHRKRKKKHSK-EPKDANGKRKKLHAEISSQTDGK 529

Query: 361 SMRVKMALLKPHATDFKRNH 420
            M+VK+     H  DFKR+H
Sbjct: 530 -MKVKITAKPNHKLDFKRSH 548



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>PHK_LACLA (Q9CFH4) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 822

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 73  PMLFSSTSDLRIIFFFHGTGEVFSYASR*PV--TLELNRLCCEVLDSFSESVEDLAMISS 246
           P LF+ TSD+ I  FF G G    Y     +   +  ++L  EV   F +++ED+  I  
Sbjct: 213 PTLFARTSDVDIRKFFEGLGYSPRYIENDDIHDYMAYHKLAAEV---FDKAIEDIHQIQK 269

Query: 247 ISLLDSSHQ 273
            +  D+ +Q
Sbjct: 270 DAREDNRYQ 278



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>AMPN_MOUSE (P97449) Aminopeptidase N (EC 3.4.11.2) (mAPN) (Alanyl|
           aminopeptidase) (Microsomal aminopeptidase)
           (Aminopeptidase M) (Membrane protein p161) (CD13
           antigen)
          Length = 965

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -1

Query: 379 PSSPSCSYPQISRLHACSVWNLSYLASIFCTVSE*AGGNCQVS*WMR 239
           P  PSC+  +       S + L+Y+ S F  +S  +    Q+  W R
Sbjct: 257 PEDPSCTMTEFHSTPKMSTYLLAYIVSEFKNISSVSANGVQIGIWAR 303



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>PPCK_SULTO (Q972S7) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 602

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 239 SHPSAYLTVPTSSFRNCTEN 298
           SHP+A  TVP ++F+N  EN
Sbjct: 364 SHPNARFTVPLTAFKNLDEN 383



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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 4   QGKKRRAPSEPCGGASSTPSPLPP 75
           +G++RR+PS P      +PSP PP
Sbjct: 543 RGRRRRSPSPPPTRRRRSPSPAPP 566



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>MAPE_HUMAN (P78395) Melanoma antigen preferentially expressed in tumors|
           (Preferentially expressed antigen of melanoma)
           (OPA-interacting protein 4) (OIP4)
          Length = 509

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 181 RLCCEVLDSFSESVEDLAMISSISLLDSSHQL 276
           RLCC+ L  F+  ++D+ MI  +  LDS   L
Sbjct: 207 RLCCKKLKIFAMPMQDIKMILKMVQLDSIEDL 238



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>GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor|
          Length = 220

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 37  CGGASSTPSPLPP 75
           CGG SSTPSP PP
Sbjct: 63  CGGNSSTPSPPPP 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,720,214
Number of Sequences: 219361
Number of extensions: 984526
Number of successful extensions: 3232
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3232
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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