| Clone Name | baet99b03 |
|---|---|
| Clone Library Name | barley_pub |
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 209 Score = 258 bits (659), Expect = 5e-69 Identities = 128/129 (99%), Positives = 128/129 (99%) Frame = +3 Query: 72 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 251 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF Sbjct: 1 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 60 Query: 252 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRXTPV 431 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR TPV Sbjct: 61 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPV 120 Query: 432 HGQAGTLGA 458 HGQAGTLGA Sbjct: 121 HGQAGTLGA 129
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 216 Score = 167 bits (422), Expect = 2e-41 Identities = 87/135 (64%), Positives = 102/135 (75%), Gaps = 9/135 (6%) Frame = +3 Query: 81 AYAPPMASQVMKSGL---ACSKPRGMSGASLT------RRPRFVVKAVKSDKPTYQVVQP 233 A PMASQ +KSG A P+G+SG +L R F V+A+K++KPTYQV+QP Sbjct: 3 ATTSPMASQ-LKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61 Query: 234 INGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGP 413 +NGDPFIG LETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPF GP Sbjct: 62 LNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 121 Query: 414 LRXTPVHGQAGTLGA 458 LR T G AG+L A Sbjct: 122 LRNTEYAGAAGSLAA 136
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 217 Score = 165 bits (417), Expect = 6e-41 Identities = 87/138 (63%), Positives = 104/138 (75%), Gaps = 9/138 (6%) Frame = +3 Query: 72 MATAYAPPMASQVMKSGLACS-----KPRGMSGASLTRRPR----FVVKAVKSDKPTYQV 224 MATA +P ASQ+ S + + P+G+S + L R P F ++A+++DKPT+QV Sbjct: 1 MATATSPT-ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQV 59 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF Sbjct: 60 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 119 Query: 405 TGPLRXTPVHGQAGTLGA 458 GPLR T G AG+L A Sbjct: 120 AGPLRNTAYAGGAGSLAA 137
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 219 Score = 164 bits (416), Expect = 8e-41 Identities = 90/137 (65%), Positives = 102/137 (74%), Gaps = 11/137 (8%) Frame = +3 Query: 81 AYAPPMASQVMKSGLACSK------PRGMSGA----SLTRR-PRFVVKAVKSDKPTYQVV 227 A A PMASQ+ S + S P+G+SGA S T+R F V+AVKSDK T+QVV Sbjct: 3 ASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVV 62 Query: 228 QPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALT 407 QPINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRG+EVGLAHG+ LVGPF Sbjct: 63 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKA 122 Query: 408 GPLRXTPVHGQAGTLGA 458 GPLR T G AG+L A Sbjct: 123 GPLRNTAYAGSAGSLAA 139
>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 99.8 bits (247), Expect = 3e-21 Identities = 49/90 (54%), Positives = 60/90 (66%) Frame = +3 Query: 189 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGL 368 K + SD +VV P DP G+LETPV +SPLV W+++NLPAYR ++P RG+EVG+ Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68 Query: 369 AHGYLLVGPFALTGPLRXTPVHGQAGTLGA 458 AHGY L GPFA GPLR AG LGA Sbjct: 69 AHGYFLFGPFAKLGPLRDAANANLAGLLGA 98
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 99.8 bits (247), Expect = 3e-21 Identities = 49/90 (54%), Positives = 60/90 (66%) Frame = +3 Query: 189 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGL 368 K + SD +VV P DP G+LETPV +SPLV W+++NLPAYR ++P RG+EVG+ Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68 Query: 369 AHGYLLVGPFALTGPLRXTPVHGQAGTLGA 458 AHGY L GPFA GPLR AG LGA Sbjct: 69 AHGYFLFGPFAKLGPLRDAANANLAGLLGA 98
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 157 Score = 97.1 bits (240), Expect = 2e-20 Identities = 43/80 (53%), Positives = 56/80 (70%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 QVVQ NGDPF+G L TP++ S ++ NLPAYR +SP+LRG+EVG+AHGY L+GP+ Sbjct: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65 Query: 399 ALTGPLRXTPVHGQAGTLGA 458 L GPLR + G +GA Sbjct: 66 TLLGPLRDSEYQYIGGLIGA 85
>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 140 Score = 96.7 bits (239), Expect = 3e-20 Identities = 44/78 (56%), Positives = 53/78 (67%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 ++P N DPF+G L TP+ SS L YLS LP YR VSP LRG+E+G+AHGY L+GPF Sbjct: 5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQ 64 Query: 405 TGPLRXTPVHGQAGTLGA 458 GPLR T + AG L A Sbjct: 65 LGPLRNTDIKYLAGLLSA 82
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 173 Score = 95.9 bits (237), Expect = 4e-20 Identities = 47/86 (54%), Positives = 56/86 (65%) Frame = +3 Query: 201 SDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGY 380 SD +VV P DP IG LETP+ SSPLV W++ NLPAYR ++ RG+EVG+AHGY Sbjct: 13 SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGY 72 Query: 381 LLVGPFALTGPLRXTPVHGQAGTLGA 458 + GPFA GPLR T AG L A Sbjct: 73 WIFGPFAKLGPLRNTVNANLAGLLSA 98
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 95.5 bits (236), Expect = 6e-20 Identities = 45/80 (56%), Positives = 55/80 (68%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 Q V+P N DPF+G+L TP+T+S LSNLPAYR +SPLLRG+E+G+ HGY LVGPF Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62 Query: 399 ALTGPLRXTPVHGQAGTLGA 458 GPLR + V AG A Sbjct: 63 YKLGPLRNSEVALLAGVFSA 82
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 155 Score = 95.5 bits (236), Expect = 6e-20 Identities = 41/78 (52%), Positives = 57/78 (73%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 ++V+P NGDPF+G L TP++ S LV ++ NLPAYR +SP+LRG+EVG+AHGY L+GP+ Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63 Query: 399 ALTGPLRXTPVHGQAGTL 452 GPLR + V G + Sbjct: 64 VKLGPLRDSDVANLGGLI 81
>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 95.5 bits (236), Expect = 6e-20 Identities = 40/70 (57%), Positives = 53/70 (75%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 + V+P N DPF+G+L TPVT+S YL NLP YR ++PLLRG+E+G+AHGY L+GPF Sbjct: 5 EFVKPFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPF 64 Query: 399 ALTGPLRXTP 428 + GPLR +P Sbjct: 65 YILGPLRNSP 74
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 94.7 bits (234), Expect = 1e-19 Identities = 40/78 (51%), Positives = 55/78 (70%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 ++P +PF+G+L TPV SS + WYL NLP YR +SPLLRG+E+G+AHGY ++GPF Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64 Query: 405 TGPLRXTPVHGQAGTLGA 458 GPLR T + +G + A Sbjct: 65 LGPLRNTDLSLLSGLIAA 82
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 153 Score = 92.8 bits (229), Expect = 4e-19 Identities = 43/80 (53%), Positives = 56/80 (70%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 + ++P N DPF+G+L TPV++S L NLPAYR +SPLLRG+E+G+AHGY L+GPF Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62 Query: 399 ALTGPLRXTPVHGQAGTLGA 458 GPLR T V AG L + Sbjct: 63 DKLGPLRGTDVALLAGFLSS 82
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 148 Score = 92.8 bits (229), Expect = 4e-19 Identities = 40/78 (51%), Positives = 56/78 (71%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 ++V+P NGDPF+G L TP++ S LV ++ NLPAYR +SP+L G+EVG+AHGY L+GP+ Sbjct: 3 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 62 Query: 399 ALTGPLRXTPVHGQAGTL 452 GPLR + V G + Sbjct: 63 VKLGPLRDSDVANLGGLI 80
>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 92.4 bits (228), Expect = 5e-19 Identities = 44/78 (56%), Positives = 55/78 (70%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 +Q N DPF+G+L TPV++S L+NLPAYR +SPLLRG+E+G+AHGY LVGPF Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64 Query: 405 TGPLRXTPVHGQAGTLGA 458 GPLR T V +G L A Sbjct: 65 LGPLRNTDVALLSGFLSA 82
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 90.1 bits (222), Expect = 2e-18 Identities = 39/69 (56%), Positives = 51/69 (73%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 ++P N DPF+G L TP+TSS + L NLPAYR ++PLLRG+E+GLAHGY L+GPF Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64 Query: 405 TGPLRXTPV 431 GPLR + + Sbjct: 65 LGPLRNSDI 73
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 81.6 bits (200), Expect = 9e-16 Identities = 38/72 (52%), Positives = 48/72 (66%) Frame = +3 Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 419 GDP +G+L TP+ +S +++NLP YR +S RG+EVG+AHGY L GPFAL GPLR Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLR 67 Query: 420 XTPVHGQAGTLG 455 G AG LG Sbjct: 68 NADFAGVAGLLG 79
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 199 Score = 79.7 bits (195), Expect = 3e-15 Identities = 41/77 (53%), Positives = 51/77 (66%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 V P++ DP +G+L TPV S +L+NLP YR +SP RG+EVG A GYLL GP+A+ Sbjct: 39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAM 97 Query: 405 TGPLRXTPVHGQAGTLG 455 TGPLR T AG LG Sbjct: 98 TGPLRNTDYALTAGLLG 114
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 166 Score = 79.3 bits (194), Expect = 4e-15 Identities = 36/71 (50%), Positives = 48/71 (67%) Frame = +3 Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 419 G P IG+L TP+ SSP +++ LP YR +S RG+E+G+AHG+LL GPF++ GPLR Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLR 69 Query: 420 XTPVHGQAGTL 452 T G AG L Sbjct: 70 NTETAGSAGLL 80
>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 75.9 bits (185), Expect = 5e-14 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 3/74 (4%) Frame = +3 Query: 243 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRX 422 DP G+L TPV +S + W++ NLP R + RG+E+G+AHGY L+GPFAL GPLR Sbjct: 11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRN 70 Query: 423 TP---VHGQAGTLG 455 T V G T+G Sbjct: 71 TELGLVAGLVSTIG 84
>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 165 Score = 75.5 bits (184), Expect = 6e-14 Identities = 35/71 (49%), Positives = 45/71 (63%) Frame = +3 Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 419 G P IG L TP SSP +++ LP YR +S RG+E+G+AHG+LL GP ++ GPLR Sbjct: 9 GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLR 68 Query: 420 XTPVHGQAGTL 452 T G AG L Sbjct: 69 NTETAGSAGLL 79
>DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-.-.-)| (Nitrogen regulation protein nifR3) Length = 324 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 3/97 (3%) Frame = +3 Query: 96 MASQVMKSGLACSKPR---GMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLE 266 M ++++ + C + G+SGA+L R P ++ +++ +G+++ Sbjct: 92 MGAEIIDINMGCPAKKVTGGLSGAALMRNPDHALRLIEA---------------VVGAVD 136 Query: 267 TPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHG 377 PVT + W L A A G+++ + HG Sbjct: 137 LPVTLKMRLGWDEDQLNAAEIAARAEAAGVKMIVIHG 173
>PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) (Fragment) Length = 20 Score = 31.2 bits (69), Expect = 1.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETP 272 ++V+P NGDPF+G L TP Sbjct: 3 ELVKPYNGDPFVGHLSTP 20
>PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease)| Length = 502 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/75 (29%), Positives = 30/75 (40%) Frame = -1 Query: 238 LMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 59 LMGW Y G + A A D + HA+ + +TW+ + A AVA+ Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292 Query: 58 FDSHTLNSALPAASN 14 N AL A N Sbjct: 293 IAYFNNNPALAGAVN 307
>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 245 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +3 Query: 207 KPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVG 365 +PT VV PI+ D I + T V S +V + L+++ + A+S GI VG Sbjct: 164 RPTTGVVIPISIDSLINRIRTMVQSKLVVGFGLNSIEDIKKAMSVGADGIAVG 216
>SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1111 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/97 (18%), Positives = 41/97 (42%) Frame = +3 Query: 18 DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 197 D G + +ED + ++ P+ + SG ++ ++G + V+K + Sbjct: 365 DGTGVVHTAPGFGEEDFYLCQSHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKL 424 Query: 198 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 308 K ++ Q I+ P +TP+ + +WY++ Sbjct: 425 KGQGSWFKTEQYIHNYPHCWRTDTPLIYRTMPSWYVA 461
>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 28.9 bits (63), Expect = 6.6 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGHVRR 157 Q+ VE G GG GH +C GD L VL+A G R+ Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALGRDRQ 359
>PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 248 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 77 HCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGCQV 202 H +C + + G L+ A R AH APLR GC+V Sbjct: 91 HAVCIVPEKREERTTEGGLEVAREENRLAHFIAPLREVGCRV 132
>RNF41_BRARE (Q7ZW16) RING finger protein 41| Length = 318 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -3 Query: 86 ICSGHLDVLLRLPHAQ--LCSACSVKW 12 ICSG L+ +R PH + C+AC +W Sbjct: 20 ICSGVLEEPVRAPHCEHAFCNACITQW 46
>SYI_WOLTR (Q5GSS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1134 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/97 (17%), Positives = 40/97 (41%) Frame = +3 Query: 18 DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 197 D G + +ED + ++ P + SG ++ ++G + ++K + Sbjct: 373 DGTGVVHTAPGFGEEDFYLCQSHDIPAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKL 432 Query: 198 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 308 K ++ Q I+ P +TP+ + +WY++ Sbjct: 433 KEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVA 469
>Y449_MYCBO (P0A5C8) Hypothetical protein Mb0449c| Length = 142 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 71 DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 196 DG S G D R GV+ + R A P++P +GC Sbjct: 91 DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132
>Y441_MYCTU (P0A5C7) Hypothetical protein Rv0441c/MT0457| Length = 142 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 71 DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 196 DG S G D R GV+ + R A P++P +GC Sbjct: 91 DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,775,620 Number of Sequences: 219361 Number of extensions: 1008190 Number of successful extensions: 3721 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3627 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3720 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)