ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, ch... 258 5e-69
2PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, ch... 167 2e-41
3PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, ch... 165 6e-41
4PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, ch... 164 8e-41
5PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PS... 100 3e-21
6PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PS... 100 3e-21
7PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PS... 97 2e-20
8PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PS... 97 3e-20
9PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PS... 96 4e-20
10PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PS... 96 6e-20
11PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PS... 96 6e-20
12PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PS... 96 6e-20
13PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PS... 95 1e-19
14PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PS... 93 4e-19
15PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PS... 93 4e-19
16PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PS... 92 5e-19
17PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PS... 90 2e-18
18PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PS... 82 9e-16
19PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PS... 80 3e-15
20PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PS... 79 4e-15
21PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PS... 76 5e-14
22PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PS... 75 6e-14
23DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-... 31 1.3
24PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PS... 31 1.3
25PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease) 30 2.3
26TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20) 30 2.3
27SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 30 2.3
28GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10) 29 6.6
29PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdx... 29 6.6
30RNF41_BRARE (Q7ZW16) RING finger protein 41 29 6.6
31SYI_WOLTR (Q5GSS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 28 8.6
32Y449_MYCBO (P0A5C8) Hypothetical protein Mb0449c 28 8.6
33Y441_MYCTU (P0A5C7) Hypothetical protein Rv0441c/MT0457 28 8.6

>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 209

 Score =  258 bits (659), Expect = 5e-69
 Identities = 128/129 (99%), Positives = 128/129 (99%)
 Frame = +3

Query: 72  MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 251
           MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF
Sbjct: 1   MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 60

Query: 252 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRXTPV 431
           IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR TPV
Sbjct: 61  IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPV 120

Query: 432 HGQAGTLGA 458
           HGQAGTLGA
Sbjct: 121 HGQAGTLGA 129



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>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 216

 Score =  167 bits (422), Expect = 2e-41
 Identities = 87/135 (64%), Positives = 102/135 (75%), Gaps = 9/135 (6%)
 Frame = +3

Query: 81  AYAPPMASQVMKSGL---ACSKPRGMSGASLT------RRPRFVVKAVKSDKPTYQVVQP 233
           A   PMASQ +KSG    A   P+G+SG +L       R   F V+A+K++KPTYQV+QP
Sbjct: 3   ATTSPMASQ-LKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61

Query: 234 INGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGP 413
           +NGDPFIG LETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPF   GP
Sbjct: 62  LNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 121

Query: 414 LRXTPVHGQAGTLGA 458
           LR T   G AG+L A
Sbjct: 122 LRNTEYAGAAGSLAA 136



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>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 217

 Score =  165 bits (417), Expect = 6e-41
 Identities = 87/138 (63%), Positives = 104/138 (75%), Gaps = 9/138 (6%)
 Frame = +3

Query: 72  MATAYAPPMASQVMKSGLACS-----KPRGMSGASLTRRPR----FVVKAVKSDKPTYQV 224
           MATA +P  ASQ+  S  + +      P+G+S + L R P     F ++A+++DKPT+QV
Sbjct: 1   MATATSPT-ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQV 59

Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 60  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 119

Query: 405 TGPLRXTPVHGQAGTLGA 458
            GPLR T   G AG+L A
Sbjct: 120 AGPLRNTAYAGGAGSLAA 137



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>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 219

 Score =  164 bits (416), Expect = 8e-41
 Identities = 90/137 (65%), Positives = 102/137 (74%), Gaps = 11/137 (8%)
 Frame = +3

Query: 81  AYAPPMASQVMKSGLACSK------PRGMSGA----SLTRR-PRFVVKAVKSDKPTYQVV 227
           A A PMASQ+  S  + S       P+G+SGA    S T+R   F V+AVKSDK T+QVV
Sbjct: 3   ASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVV 62

Query: 228 QPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALT 407
           QPINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRG+EVGLAHG+ LVGPF   
Sbjct: 63  QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKA 122

Query: 408 GPLRXTPVHGQAGTLGA 458
           GPLR T   G AG+L A
Sbjct: 123 GPLRNTAYAGSAGSLAA 139



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>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 49/90 (54%), Positives = 60/90 (66%)
 Frame = +3

Query: 189 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGL 368
           K + SD    +VV P   DP  G+LETPV +SPLV W+++NLPAYR  ++P  RG+EVG+
Sbjct: 9   KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68

Query: 369 AHGYLLVGPFALTGPLRXTPVHGQAGTLGA 458
           AHGY L GPFA  GPLR       AG LGA
Sbjct: 69  AHGYFLFGPFAKLGPLRDAANANLAGLLGA 98



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>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 49/90 (54%), Positives = 60/90 (66%)
 Frame = +3

Query: 189 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGL 368
           K + SD    +VV P   DP  G+LETPV +SPLV W+++NLPAYR  ++P  RG+EVG+
Sbjct: 9   KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68

Query: 369 AHGYLLVGPFALTGPLRXTPVHGQAGTLGA 458
           AHGY L GPFA  GPLR       AG LGA
Sbjct: 69  AHGYFLFGPFAKLGPLRDAANANLAGLLGA 98



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>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 157

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398
           QVVQ  NGDPF+G L TP++ S     ++ NLPAYR  +SP+LRG+EVG+AHGY L+GP+
Sbjct: 6   QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65

Query: 399 ALTGPLRXTPVHGQAGTLGA 458
            L GPLR +      G +GA
Sbjct: 66  TLLGPLRDSEYQYIGGLIGA 85



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>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 140

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 44/78 (56%), Positives = 53/78 (67%)
 Frame = +3

Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404
           ++P N DPF+G L TP+ SS L   YLS LP YR  VSP LRG+E+G+AHGY L+GPF  
Sbjct: 5   IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQ 64

Query: 405 TGPLRXTPVHGQAGTLGA 458
            GPLR T +   AG L A
Sbjct: 65  LGPLRNTDIKYLAGLLSA 82



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>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 173

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 47/86 (54%), Positives = 56/86 (65%)
 Frame = +3

Query: 201 SDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGY 380
           SD    +VV P   DP IG LETP+ SSPLV W++ NLPAYR  ++   RG+EVG+AHGY
Sbjct: 13  SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGY 72

Query: 381 LLVGPFALTGPLRXTPVHGQAGTLGA 458
            + GPFA  GPLR T     AG L A
Sbjct: 73  WIFGPFAKLGPLRNTVNANLAGLLSA 98



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>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 45/80 (56%), Positives = 55/80 (68%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398
           Q V+P N DPF+G+L TP+T+S      LSNLPAYR  +SPLLRG+E+G+ HGY LVGPF
Sbjct: 3   QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62

Query: 399 ALTGPLRXTPVHGQAGTLGA 458
              GPLR + V   AG   A
Sbjct: 63  YKLGPLRNSEVALLAGVFSA 82



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>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 155

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 41/78 (52%), Positives = 57/78 (73%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398
           ++V+P NGDPF+G L TP++ S LV  ++ NLPAYR  +SP+LRG+EVG+AHGY L+GP+
Sbjct: 4   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63

Query: 399 ALTGPLRXTPVHGQAGTL 452
              GPLR + V    G +
Sbjct: 64  VKLGPLRDSDVANLGGLI 81



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>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 147

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398
           + V+P N DPF+G+L TPVT+S     YL NLP YR  ++PLLRG+E+G+AHGY L+GPF
Sbjct: 5   EFVKPFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPF 64

Query: 399 ALTGPLRXTP 428
            + GPLR +P
Sbjct: 65  YILGPLRNSP 74



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>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +3

Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404
           ++P   +PF+G+L TPV SS +  WYL NLP YR  +SPLLRG+E+G+AHGY ++GPF  
Sbjct: 5   IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64

Query: 405 TGPLRXTPVHGQAGTLGA 458
            GPLR T +   +G + A
Sbjct: 65  LGPLRNTDLSLLSGLIAA 82



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>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 153

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398
           + ++P N DPF+G+L TPV++S      L NLPAYR  +SPLLRG+E+G+AHGY L+GPF
Sbjct: 3   EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62

Query: 399 ALTGPLRXTPVHGQAGTLGA 458
              GPLR T V   AG L +
Sbjct: 63  DKLGPLRGTDVALLAGFLSS 82



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>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 148

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 40/78 (51%), Positives = 56/78 (71%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398
           ++V+P NGDPF+G L TP++ S LV  ++ NLPAYR  +SP+L G+EVG+AHGY L+GP+
Sbjct: 3   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 62

Query: 399 ALTGPLRXTPVHGQAGTL 452
              GPLR + V    G +
Sbjct: 63  VKLGPLRDSDVANLGGLI 80



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>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 44/78 (56%), Positives = 55/78 (70%)
 Frame = +3

Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404
           +Q  N DPF+G+L TPV++S      L+NLPAYR  +SPLLRG+E+G+AHGY LVGPF  
Sbjct: 5   IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64

Query: 405 TGPLRXTPVHGQAGTLGA 458
            GPLR T V   +G L A
Sbjct: 65  LGPLRNTDVALLSGFLSA 82



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>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = +3

Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404
           ++P N DPF+G L TP+TSS +    L NLPAYR  ++PLLRG+E+GLAHGY L+GPF  
Sbjct: 5   IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64

Query: 405 TGPLRXTPV 431
            GPLR + +
Sbjct: 65  LGPLRNSDI 73



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>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 38/72 (52%), Positives = 48/72 (66%)
 Frame = +3

Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 419
           GDP +G+L TP+ +S     +++NLP YR  +S   RG+EVG+AHGY L GPFAL GPLR
Sbjct: 8   GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLR 67

Query: 420 XTPVHGQAGTLG 455
                G AG LG
Sbjct: 68  NADFAGVAGLLG 79



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>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 199

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 41/77 (53%), Positives = 51/77 (66%)
 Frame = +3

Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404
           V P++ DP +G+L TPV S      +L+NLP YR  +SP  RG+EVG A GYLL GP+A+
Sbjct: 39  VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAM 97

Query: 405 TGPLRXTPVHGQAGTLG 455
           TGPLR T     AG LG
Sbjct: 98  TGPLRNTDYALTAGLLG 114



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>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 166

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = +3

Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 419
           G P IG+L TP+ SSP    +++ LP YR  +S   RG+E+G+AHG+LL GPF++ GPLR
Sbjct: 10  GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLR 69

Query: 420 XTPVHGQAGTL 452
            T   G AG L
Sbjct: 70  NTETAGSAGLL 80



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>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 147

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = +3

Query: 243 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRX 422
           DP  G+L TPV +S  + W++ NLP  R  +    RG+E+G+AHGY L+GPFAL GPLR 
Sbjct: 11  DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRN 70

Query: 423 TP---VHGQAGTLG 455
           T    V G   T+G
Sbjct: 71  TELGLVAGLVSTIG 84



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>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 165

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 35/71 (49%), Positives = 45/71 (63%)
 Frame = +3

Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 419
           G P IG L TP  SSP    +++ LP YR  +S   RG+E+G+AHG+LL GP ++ GPLR
Sbjct: 9   GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLR 68

Query: 420 XTPVHGQAGTL 452
            T   G AG L
Sbjct: 69  NTETAGSAGLL 79



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>DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-.-.-)|
           (Nitrogen regulation protein nifR3)
          Length = 324

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
 Frame = +3

Query: 96  MASQVMKSGLACSKPR---GMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLE 266
           M ++++   + C   +   G+SGA+L R P   ++ +++                +G+++
Sbjct: 92  MGAEIIDINMGCPAKKVTGGLSGAALMRNPDHALRLIEA---------------VVGAVD 136

Query: 267 TPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHG 377
            PVT    + W    L A   A      G+++ + HG
Sbjct: 137 LPVTLKMRLGWDEDQLNAAEIAARAEAAGVKMIVIHG 173



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>PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V) (Fragment)
          Length = 20

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 219 QVVQPINGDPFIGSLETP 272
           ++V+P NGDPF+G L TP
Sbjct: 3   ELVKPYNGDPFVGHLSTP 20



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>PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease)|
          Length = 502

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = -1

Query: 238 LMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 59
           LMGW   Y G   + A           A D    + HA+ + +TW+ +  A AVA+    
Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292

Query: 58  FDSHTLNSALPAASN 14
                 N AL  A N
Sbjct: 293 IAYFNNNPALAGAVN 307



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>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 245

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +3

Query: 207 KPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVG 365
           +PT  VV PI+ D  I  + T V S  +V + L+++   + A+S    GI VG
Sbjct: 164 RPTTGVVIPISIDSLINRIRTMVQSKLVVGFGLNSIEDIKKAMSVGADGIAVG 216



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>SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1111

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/97 (18%), Positives = 41/97 (42%)
 Frame = +3

Query: 18  DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 197
           D  G    +    +ED  +  ++  P+   +  SG   ++   ++G  +      V+K +
Sbjct: 365 DGTGVVHTAPGFGEEDFYLCQSHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKL 424

Query: 198 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 308
           K     ++  Q I+  P     +TP+    + +WY++
Sbjct: 425 KGQGSWFKTEQYIHNYPHCWRTDTPLIYRTMPSWYVA 461



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>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 449

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +2

Query: 29  QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGHVRR 157
           Q+ VE  G  GG   GH +C      GD     L VL+A G  R+
Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALGRDRQ 359



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>PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 248

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 77  HCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGCQV 202
           H +C    +  +    G L+ A    R AH  APLR  GC+V
Sbjct: 91  HAVCIVPEKREERTTEGGLEVAREENRLAHFIAPLREVGCRV 132



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>RNF41_BRARE (Q7ZW16) RING finger protein 41|
          Length = 318

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -3

Query: 86  ICSGHLDVLLRLPHAQ--LCSACSVKW 12
           ICSG L+  +R PH +   C+AC  +W
Sbjct: 20  ICSGVLEEPVRAPHCEHAFCNACITQW 46



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>SYI_WOLTR (Q5GSS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1134

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/97 (17%), Positives = 40/97 (41%)
 Frame = +3

Query: 18  DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 197
           D  G    +    +ED  +  ++  P    +  SG   ++   ++G  +      ++K +
Sbjct: 373 DGTGVVHTAPGFGEEDFYLCQSHDIPAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKL 432

Query: 198 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 308
           K     ++  Q I+  P     +TP+    + +WY++
Sbjct: 433 KEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVA 469



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>Y449_MYCBO (P0A5C8) Hypothetical protein Mb0449c|
          Length = 142

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 71  DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 196
           DG    S  G   D  R GV+     + R A P++P   +GC
Sbjct: 91  DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132



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>Y441_MYCTU (P0A5C7) Hypothetical protein Rv0441c/MT0457|
          Length = 142

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 71  DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 196
           DG    S  G   D  R GV+     + R A P++P   +GC
Sbjct: 91  DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,775,620
Number of Sequences: 219361
Number of extensions: 1008190
Number of successful extensions: 3721
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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