ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 p... 60 1e-09
2FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 pre... 56 3e-08
3FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 pre... 54 1e-07

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +2

Query: 173 GYNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGS 316
           G+NIT+IL + PEYS FN  L+QT+LA +IN R TITVLV+ N  M S
Sbjct: 25  GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSS 72



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>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +2

Query: 176 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGS 316
           +NIT+IL + P+YS FN  L+QT+LA +IN R TITVLV+ N  M +
Sbjct: 26  HNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSA 72



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>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor|
          Length = 424

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +2

Query: 176 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGS 316
           +N+T++L  +P +S F+  LTQT LA +IN+RRTITV  V N+ M +
Sbjct: 25  HNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSA 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,474,216
Number of Sequences: 219361
Number of extensions: 162358
Number of successful extensions: 787
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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