ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234795.1|HVU234795 Hordeum vulgare genomic DNA fragment; c... 410 e-112
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 2e-07
3gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str... 64 2e-07
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 2e-07
5dbj|AK061461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-07
6dbj|AK105970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
7gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.003
8emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 48 0.013
9gb|AC146521.2| Oryza sativa chromosome 3 B1246D11 genomic seque... 44 0.21
10gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.21
11emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.21
12emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.21
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.21
14dbj|AK070241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.21
15dbj|AK068223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.21
16emb|AL442124.6| Human DNA sequence from clone RP11-37D8 on chrom... 42 0.82
17gb|AE005831.1| Caulobacter crescentus CB15 section 157 of 359 of... 42 0.82
18gb|AE004587.1| Pseudomonas aeruginosa PAO1, section 148 of 529 o... 42 0.82
19gb|AF218037.1|AF218037 Aeromonas salmonicida RTX protein (asx) g... 42 0.82
20ref|NM_183742.1| Oryza sativa (japonica cultivar-group), predic... 40 3.2
21gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
22gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.2
23gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.2
24ref|NM_001010908.1| Homo sapiens complement component 1, q subco... 40 3.2
25gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, com... 40 3.2
26emb|AL353576.18| Human DNA sequence from clone RP11-335J9 on chr... 40 3.2
27emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on ch... 40 3.2
28emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.2
29ref|NM_204573.1| Gallus gallus cgABP260 (LOC395260), mRNA 40 3.2
30gb|DQ436920.1| Zea mays ramosa 3 (RA3) mRNA, complete cds 40 3.2
31emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot... 40 3.2
32gb|AE011756.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 3.2
33gb|AC024339.11| Homo sapiens chromosome 10, clone RP11-281O24, c... 40 3.2
34gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 3.2
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
37gb|AC084514.1|CBRG17K04 Caenorhabditis briggsae cosmid G17K04, c... 40 3.2
38gb|AE004952.1| Pseudomonas aeruginosa PAO1, section 513 of 529 o... 40 3.2
39gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.2
40dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
41dbj|AK070437.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
42gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 3.2
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
44dbj|AB056475.1| Gallus gallus mRNA for cgABP260, complete cds 40 3.2 
>emb|AJ234795.1|HVU234795 Hordeum vulgare genomic DNA fragment; clone MWG2135.uni
          Length = 386

 Score =  410 bits (207), Expect = e-112
 Identities = 207/207 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   caatctcacaccacattccacggacaaaaccacaccttctgaaaccaccatcgatcgtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 caatctcacaccacattccacggacaaaaccacaccttctgaaaccaccatcgatcgtag 148

                                                                       
Query: 61  cagctagcagtgcagtacacaggcagtaacagccacagcggcgagaatggcggcaaggtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cagctagcagtgcagtacacaggcagtaacagccacagcggcgagaatggcggcaaggtc 88

                                                                       
Query: 121 gtcgctgctgcttgtcttcgcgctggccgcggtggcagcgcacggcgccgacggtgcgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  gtcgctgctgcttgtcttcgcgctggccgcggtggcagcgcacggcgccgacggtgcgac 28

                                      
Query: 181 cgtggccgcgccggcgccggccgtgga 207
           |||||||||||||||||||||||||||
Sbjct: 27  cgtggccgcgccggcgccggccgtgga 1
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                           
Query: 188     gcgccggcgccggccgtggactgcagcgacgccctgatcagcctggcggggtgcctgagc 247
               |||||||||||||| | ||||||||  ||||| ||| | ||||||||||| |||||||||
Sbjct: 4803918 gcgccggcgccggcggcggactgcacggacgcgctgctgagcctggcgggttgcctgagc 4803859

                   
Query: 248     tacg 251
               ||||
Sbjct: 4803858 tacg 4803855



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 188      gcgccggcgccggccgtggactgca 212
                |||||||||||||||||||||||||
Sbjct: 15139035 gcgccggcgccggccgtggactgca 15139059



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 191      ccggcgccggccgtggactgca 212
                ||||||||||||||||||||||
Sbjct: 15145979 ccggcgccggccgtggactgca 15146000
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>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 188   gcgccggcgccggccgtggactgcagcgacgccctgatcagcctggcggggtgcctgagc 247
             |||||||||||||| | ||||||||  ||||| ||| | ||||||||||| |||||||||
Sbjct: 31537 gcgccggcgccggcggcggactgcacggacgcgctgctgagcctggcgggttgcctgagc 31596

                 
Query: 248   tacg 251
             ||||
Sbjct: 31597 tacg 31600
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                           
Query: 188     gcgccggcgccggccgtggactgcagcgacgccctgatcagcctggcggggtgcctgagc 247
               |||||||||||||| | ||||||||  ||||| ||| | ||||||||||| |||||||||
Sbjct: 4804033 gcgccggcgccggcggcggactgcacggacgcgctgctgagcctggcgggttgcctgagc 4803974

                   
Query: 248     tacg 251
               ||||
Sbjct: 4803973 tacg 4803970



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 188      gcgccggcgccggccgtggactgca 212
                |||||||||||||||||||||||||
Sbjct: 15133569 gcgccggcgccggccgtggactgca 15133593



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 191      ccggcgccggccgtggactgca 212
                ||||||||||||||||||||||
Sbjct: 15140513 ccggcgccggccgtggactgca 15140534
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>dbj|AK061461.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B10, full
           insert sequence
          Length = 1044

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 188 gcgccggcgccggccgtggactgcagcgacgccctgatcagcctggcggggtgcctgagc 247
           |||||||||||||| | ||||||||  ||||| ||| | ||||||||||| |||||||||
Sbjct: 414 gcgccggcgccggcggcggactgcacggacgcgctgctgagcctggcgggttgcctgagc 473

               
Query: 248 tacg 251
           ||||
Sbjct: 474 tacg 477
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>dbj|AK105970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E12, full
           insert sequence
          Length = 1074

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 188 gcgccggcgccggccgtggactgcagcgacgccctgatcagcctggcggggtgcctgagc 247
           |||||||||||||| | ||||||||  ||| | ||| | ||||||||||| |||||||||
Sbjct: 414 gcgccggcgccggcggcggactgcacggacacgctgctgagcctggcgggttgcctgagc 473

               
Query: 248 tacg 251
           ||||
Sbjct: 474 tacg 477
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>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048F08, from chromosome 3, complete sequence
          Length = 155790

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 188   gcgccggcgccggccgtggactgca 212
             |||||||||||||||||||||||||
Sbjct: 15738 gcgccggcgccggccgtggactgca 15714



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 191  ccggcgccggccgtggactgca 212
            ||||||||||||||||||||||
Sbjct: 8794 ccggcgccggccgtggactgca 8773
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 180     ccgtggccgcgccggcgccggccg 203
               ||||||||||||||||||||||||
Sbjct: 1773039 ccgtggccgcgccggcgccggccg 1773016
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>gb|AC146521.2| Oryza sativa chromosome 3  B1246D11 genomic sequence, complete sequence
          Length = 43277

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   ccggcgccggccgtggactgca 212
             ||||||||||||||||||||||
Sbjct: 41088 ccggcgccggccgtggactgca 41067
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 127     gctgcttgtcttcgcgctggccgcggtggc 156
               ||||| ||||| ||||||||||||||||||
Sbjct: 2853239 gctgcatgtctccgcgctggccgcggtggc 2853210
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
            10/14
          Length = 307550

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 127  gctgcttgtcttcgcgctggccgcggtggc 156
            ||||| ||||| ||||||||||||||||||
Sbjct: 7049 gctgcatgtctccgcgctggccgcggtggc 7020
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 127   gctgcttgtcttcgcgctggccgcggtggc 156
             ||||| ||||| ||||||||||||||||||
Sbjct: 84716 gctgcatgtctccgcgctggccgcggtggc 84687
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 165     gcgccgacggtgcgaccgtggccgcgccggcgcc 198
               ||||||||||||||| | |||||||||| |||||
Sbjct: 4820216 gcgccgacggtgcgatcatggccgcgcccgcgcc 4820249



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 176     gcgaccgtggccgcgccggcgccggccg 203
               ||||||| ||||||||||||| ||||||
Sbjct: 5487806 gcgaccgcggccgcgccggcggcggccg 5487833



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     cgagaatggcggcaaggtcg 121
               ||||||||||||||||||||
Sbjct: 4129253 cgagaatggcggcaaggtcg 4129272
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>dbj|AK070241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044C09, full
           insert sequence
          Length = 832

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 191 ccggcgccggccgtggactgca 212
           ||||||||||||||||||||||
Sbjct: 166 ccggcgccggccgtggactgca 187
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>dbj|AK068223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140G04, full
           insert sequence
          Length = 865

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 191 ccggcgccggccgtggactgca 212
           ||||||||||||||||||||||
Sbjct: 173 ccggcgccggccgtggactgca 194
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>emb|AL442124.6| Human DNA sequence from clone RP11-37D8 on chromosome 6 Contains part
             of the gene for smooth muscle cell associated protein 2
             (SMAP2) or secreted modular calcium binding protein 2
             (SMOC2), complete sequence
          Length = 45725

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 24    acaaaaccacaccttctgaaaccac 48
             ||||||||||||||||| |||||||
Sbjct: 17704 acaaaaccacaccttcttaaaccac 17728
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>gb|AE005831.1| Caulobacter crescentus CB15 section 157 of 359 of the complete genome
          Length = 13304

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 187  cgcgccggcgccggccgtgga 207
            |||||||||||||||||||||
Sbjct: 1256 cgcgccggcgccggccgtgga 1276
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>gb|AE004587.1| Pseudomonas aeruginosa PAO1, section 148 of 529 of the complete
            genome
          Length = 11149

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 175  tgcgaccgtggccgcgccggcgccg 199
            |||||||||||||||| ||||||||
Sbjct: 7156 tgcgaccgtggccgcggcggcgccg 7180
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>gb|AF218037.1|AF218037 Aeromonas salmonicida RTX protein (asx) gene, complete cds
          Length = 14660

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 181  cgtggccgcgccggcgccggccgtg 205
            ||||||||||||||||||| |||||
Sbjct: 8398 cgtggccgcgccggcgccgaccgtg 8422
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>ref|NM_183742.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 543

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gcgccggcgccggccgtgga 207
           ||||||||||||||||||||
Sbjct: 4   gcgccggcgccggccgtgga 23
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>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09
              map near S6115, complete sequence
          Length = 215240

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ggtcgtcgctgctgcttgtc 136
              ||||||||||||||||||||
Sbjct: 160211 ggtcgtcgctgctgcttgtc 160230
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cggcgccgacggtgcgaccg 182
               ||||||||||||||||||||
Sbjct: 2750807 cggcgccgacggtgcgaccg 2750826



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cggcgccgacggtgcgaccg 182
               ||||||||||||||||||||
Sbjct: 2730397 cggcgccgacggtgcgaccg 2730416
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cggcgccgacggtgcgaccg 182
               ||||||||||||||||||||
Sbjct: 4123296 cggcgccgacggtgcgaccg 4123315



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cggcgccgacggtgcgaccg 182
               ||||||||||||||||||||
Sbjct: 4102886 cggcgccgacggtgcgaccg 4102905
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>ref|NM_001010908.1| Homo sapiens complement component 1, q subcomponent-like 3 (C1QL3),
           mRNA
          Length = 2493

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 gtggccgcgccggcgccggc 201
           ||||||||||||||||||||
Sbjct: 582 gtggccgcgccggcgccggc 601
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>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence
          Length = 130895

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    cacaggcagtaacagccacagcgg 101
             ||||||||| ||||||||||||||
Sbjct: 70826 cacaggcagcaacagccacagcgg 70849
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>emb|AL353576.18| Human DNA sequence from clone RP11-335J9 on chromosome 10 Contains
            the 5' end of the gene for a novel protein possible
            ortholog of mouse C1q-like protein (gliacolin) and a CpG
            island, complete sequence
          Length = 52065

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gtggccgcgccggcgccggc 201
            ||||||||||||||||||||
Sbjct: 4242 gtggccgcgccggcgccggc 4223
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>emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on chromosome 13 Contains part
              of a novel gene (KIAA0916), complete sequence
          Length = 124964

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     accacaccttctgaaaccac 48
              ||||||||||||||||||||
Sbjct: 120059 accacaccttctgaaaccac 120040
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cggcgccgacggtgcgaccg 182
               ||||||||||||||||||||
Sbjct: 3828570 cggcgccgacggtgcgaccg 3828589



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cggcgccgacggtgcgaccg 182
               ||||||||||||||||||||
Sbjct: 3809473 cggcgccgacggtgcgaccg 3809492
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>ref|NM_204573.1| Gallus gallus cgABP260 (LOC395260), mRNA
          Length = 8120

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ccgtggactgcagcgacgcc 220
            ||||||||||||||||||||
Sbjct: 2349 ccgtggactgcagcgacgcc 2368
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>gb|DQ436920.1| Zea mays ramosa 3 (RA3) mRNA, complete cds
          Length = 1086

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 180 ccgtggccgcgccggcgccggccg 203
           ||||||| ||||||||||||||||
Sbjct: 44  ccgtggcggcgccggcgccggccg 67
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>emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot globule-associated
           protein 1 (gap1 gene), strain SAG B 1.85
          Length = 2358

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 175 tgcgaccgtggccgcgccggcgcc 198
           |||| |||||||||||||||||||
Sbjct: 546 tgcgcccgtggccgcgccggcgcc 569



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 175 tgcgaccgtggccgcgccggcgcc 198
           |||| |||||||||||||||||||
Sbjct: 486 tgcgcccgtggccgcgccggcgcc 509



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 175 tgcgaccgtggccgcgccggcgcc 198
           |||| |||||||||||||||||||
Sbjct: 318 tgcgcccgtggccgcgccggcgcc 341
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>gb|AE011756.1| Xanthomonas axonopodis pv. citri str. 306,  section 134 of 469 of the
             complete genome
          Length = 12738

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ggccgcgccggcgccggccg 203
             ||||||||||||||||||||
Sbjct: 11148 ggccgcgccggcgccggccg 11167
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>gb|AC024339.11| Homo sapiens chromosome 10, clone RP11-281O24, complete sequence
          Length = 195191

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  gtggccgcgccggcgccggc 201
            ||||||||||||||||||||
Sbjct: 5377 gtggccgcgccggcgccggc 5396
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 136     cttcgcgctggccgcggtgg 155
               ||||||||||||||||||||
Sbjct: 3928488 cttcgcgctggccgcggtgg 3928507
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ggtcgtcgctgctgcttgtc 136
                ||||||||||||||||||||
Sbjct: 12777535 ggtcgtcgctgctgcttgtc 12777554
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      gcgccggcgccggccgtgga 207
                ||||||||||||||||||||
Sbjct: 11957539 gcgccggcgccggccgtgga 11957558
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>gb|AC084514.1|CBRG17K04 Caenorhabditis briggsae cosmid G17K04, complete sequence
          Length = 26339

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    accacaccttctgaaaccac 48
             ||||||||||||||||||||
Sbjct: 10200 accacaccttctgaaaccac 10219
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>gb|AE004952.1| Pseudomonas aeruginosa PAO1, section 513 of 529 of the complete
            genome
          Length = 10523

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ggccgcgccggcgccggccg 203
            ||||||||||||||||||||
Sbjct: 9041 ggccgcgccggcgccggccg 9060
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 180     ccgtggccgcgccggcgccggccg 203
               |||| |||||||||||||||||||
Sbjct: 1292398 ccgtcgccgcgccggcgccggccg 1292375



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     ggccgcgccggcgccggccg 203
               ||||||||||||||||||||
Sbjct: 1138364 ggccgcgccggcgccggccg 1138383
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>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0028G04
          Length = 159761

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gcgccggcgccggccgtgga 207
            ||||||||||||||||||||
Sbjct: 3203 gcgccggcgccggccgtgga 3222
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>dbj|AK070437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F17, full
           insert sequence
          Length = 3946

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gcgccggcgccggccgtgga 207
           ||||||||||||||||||||
Sbjct: 336 gcgccggcgccggccgtgga 355
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 180     ccgtggccgcgccggcgccggccg 203
               |||| |||||||||||||||||||
Sbjct: 3182642 ccgtcgccgcgccggcgccggccg 3182665
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ggtcgtcgctgctgcttgtc 136
                ||||||||||||||||||||
Sbjct: 12856842 ggtcgtcgctgctgcttgtc 12856861
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>dbj|AB056475.1| Gallus gallus mRNA for cgABP260, complete cds
          Length = 8120

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ccgtggactgcagcgacgcc 220
            ||||||||||||||||||||
Sbjct: 2349 ccgtggactgcagcgacgcc 2368


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,797,236
Number of Sequences: 3902068
Number of extensions: 1797236
Number of successful extensions: 44581
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42833
Number of HSP's gapped (non-prelim): 1748
length of query: 251
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 229
effective length of database: 17,147,199,772
effective search space: 3926708747788
effective search space used: 3926708747788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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