ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet99a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 56 2e-08
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 45 6e-05
314KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 39 0.003
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 28 4.6

>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 24/48 (50%), Positives = 28/48 (58%)
 Frame = +1

Query: 148 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADPDAALCLC 291
           CP+D LKL ACVD               +TCCPLL G+ D DAA+CLC
Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLC 308



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 22/48 (45%), Positives = 24/48 (50%)
 Frame = +1

Query: 148 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADPDAALCLC 291
           CP+D LKL  C                 E CCPLL G+ D DAALCLC
Sbjct: 48  CPIDALKLKVCAKVLGLVKVGLPQY---EQCCPLLEGLVDLDAALCLC 92



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>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 148 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADPDAALCLC 291
           CP D LKL  C D              +  CC LL G+ + +AA+CLC
Sbjct: 54  CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLC 101



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 232 ETCCPLLSGVADPDAALCLC 291
           + CC L+ G+ D +A +CLC
Sbjct: 26  DDCCALIGGLGDIEAIVCLC 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,124,608
Number of Sequences: 219361
Number of extensions: 174566
Number of successful extensions: 454
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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