Clone Information

BLAST Search Result

Clone Name	baet99a05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box D...	40	0.001
2	FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box D...	39	0.004
3	FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuc...	34	0.076
4	STP2_HUMAN (Q05952) Nuclear transition protein 2 (TP-2) (TP2)	34	0.099
5	STP2_PONPY (Q9N1A4) Nuclear transition protein 2 (TP-2) (TP2) (F...	33	0.13
6	STP2_PANPA (Q9N1A6) Nuclear transition protein 2 (TP-2) (TP2) (F...	33	0.13
7	STP2_GORGO (Q9N1A5) Nuclear transition protein 2 (TP-2) (TP2) (F...	33	0.22
8	FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci...	32	0.29
9	FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic...	32	0.29
10	V2A_TAV (P29035) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (p...	32	0.38
11	FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leuc...	32	0.38
12	STP2_MACMU (Q9N1A3) Nuclear transition protein 2 (TP-2) (TP2) (F...	32	0.49
13	BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (b...	32	0.49
14	FBX27_MOUSE (Q6DIA9) F-box only protein 27	31	0.64
15	STP2_PANTR (Q9N1A7) Nuclear transition protein 2 (TP-2) (TP2) (F...	31	0.64
16	STP2_MACFA (Q8WNV1) Nuclear transition protein 2 (TP-2) (TP2)	31	0.64
17	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	30	1.4
18	AGRN_RAT (P25304) Agrin precursor	30	1.4
19	NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fr...	29	2.4
20	PHK_STRAW (Q82NM9) Probable phosphoketolase (EC 4.1.2.-)	29	2.4
21	EMS_DROME (P18488) Homeotic protein empty spiracles	29	3.2
22	VGLG_TRTV (P33495) Major surface glycoprotein G (Attachment glyc...	29	3.2
23	DLGP2_HUMAN (Q9P1A6) Disks large-associated protein 2 (DAP-2) (S...	28	4.2
24	RDRP_PAV (Q9J7Z2) RNA-directed RNA polymerase (EC 2.7.7.48) (RdR...	28	4.2
25	RYK1_DROME (Q27324) Tyrosine-protein kinase Drl precursor (EC 2....	28	4.2
26	XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1...	28	4.2
27	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	28	5.4
28	YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon ...	28	5.4
29	TOF2_YEAST (Q02208) Topoisomerase 1-associated factor 2	28	5.4
30	AMEL_CAVPO (Q9Z0K9) Amelogenin precursor	28	5.4
31	VE7_HPV68 (P54668) Protein E7	28	5.4
32	BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui	28	5.4
33	FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 3...	28	5.4
34	IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2	28	5.4
35	FBX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 3...	28	5.4
36	FBX24_MOUSE (Q9D417) F-box only protein 24	28	7.1
37	ARI1A_HUMAN (O14497) AT-rich interactive domain-containing prote...	28	7.1
38	V66K_TYYVF (P09506) 66.2 kDa protein (ORF 2)	28	7.1
39	PQE1_CAEEL (Q10124) Putative RNA exonuclease pqe-1 (PolyQ enhanc...	28	7.1
40	SGPL1_RAT (Q8CHN6) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27)...	28	7.1
41	SGPL1_MOUSE (Q8R0X7) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.2...	28	7.1
42	DTD_XANCP (Q8P4H1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	28	7.1
43	DLGP2_RAT (P97837) Disks large-associated protein 2 (DAP-2) (SAP...	28	7.1
44	DLGP2_MOUSE (Q8BJ42) Disks large-associated protein 2 (DAP-2) (S...	28	7.1
45	ASIP_BOVIN (Q29414) Agouti signaling protein precursor (ASP) (Ag...	28	7.1
46	SSB_RALEU (P59927) Single-stranded DNA-binding protein (SSB) (He...	28	7.1
47	ZN265_HUMAN (O95218) Zinc finger protein 265 (Zinc finger, splic...	27	9.3
48	YXEQ_BACSU (P54956) Hypothetical protein yxeQ	27	9.3
49	ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC ...	27	9.3
50	RPOC2_EUCGG (Q49L08) DNA-directed RNA polymerase beta'' chain (E...	27	9.3
51	CYCL_DROME (O61734) Protein cycle (Brain and muscle ARNT-like 1)...	27	9.3
52	ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3...	27	9.3
53	ZN265_RAT (O35986) Zinc finger protein 265 (Zinc finger, splicing)	27	9.3
54	OXAA_STRCO (O54569) Membrane protein oxaA	27	9.3
55	SNPC3_BOVIN (Q5E9M5) snRNA-activating protein complex subunit 3 ...	27	9.3
56	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	27	9.3
57	DTD_XANOR (Q5H5B9) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	27	9.3
58	ERG3_ASHGO (Q754B9) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C...	27	9.3
59	ZN265_MOUSE (Q9R020) Zinc finger protein 265 (Zinc finger, splic...	27	9.3

>FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1042

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147 PTENQSASISRLTPDVLHEILLRLPVSSLQ-RLRRTCHQWRGIISDPCFI 293
           P +   + I RL  +VL  I   LPV  L   L   CH WR II+DP FI
Sbjct: 202 PCQEVPSHICRLPSEVLRHIFAFLPVEDLYWNLSLVCHLWREIINDPLFI 251

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>FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1043

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147 PTENQSASISRLTPDVLHEILLRLPVSSLQ-RLRRTCHQWRGIISDPCFI 293
           P +   + I  L  +VL  +   LPV  L   L   CH WR IISDP FI
Sbjct: 204 PCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFI 253

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>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 165 ASISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIISD 281
           A++  L   VL EI   LPV    R+ R CH+W+ ++ D
Sbjct: 2   ATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40

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>STP2_HUMAN (Q05952) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 138

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR ++R  +S S  Q P + R       +SG QS ++P   PP  RH +    HH   +P
Sbjct: 37  CRQSHRGSRSQSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPMRP 95

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>STP2_PONPY (Q9N1A4) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 138

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAANRKSVSKH--QPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR + R S S++  Q P +         +SG QS ++P D PP  RH +    HH   +P
Sbjct: 42  CRQSQRGSWSQNSSQSPASHHNPTGAHSSSGHQS-QSPNDSPPPKRHKKTMNSHHSPTRP 100

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>STP2_PANPA (Q9N1A6) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR ++R  +S S  Q P + R       +SG QS ++P   PP  RH +    HH   +P
Sbjct: 37  CRQSHRGSRSRSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPMRP 95

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>STP2_GORGO (Q9N1A5) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR ++R  +S S  Q P + R       +SG QS ++P   PP  RH +    HH   +P
Sbjct: 37  CRQSHRGSRSRSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPRRP 95

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>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 138 AEQPTENQSASISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIISDP 284
           A +P + Q ASI RL    + +I   LP + L R  R C +W  +  DP
Sbjct: 104 ASRPQKEQ-ASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDP 151

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>FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic protein 1)|
          Length = 332

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 168 SISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIIS 278
           S SRL   VL++I   LP+  L+    TCH W   +S
Sbjct: 81  SASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALS 117

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>V2A_TAV (P29035) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 828

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 95  IGDKVLGNGQ*WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHN 274
           I D ++G G+  K  R    +S  KH+ P TR  ++  +  S E STE      P    +
Sbjct: 765 ISDLIVGRGKSSKASRRKAVESNGKHRDPSTRDHSKVGTDESKETSTEETTQTEPQGAGS 824

Query: 275 QR 280
           Q+
Sbjct: 825 QK 826

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>FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 186 PD-VLHEILLRLPVSSLQRLRRTCHQWRGIISD 281
           PD VL EI   LPV    R+ R CH+W+ ++ D
Sbjct: 8   PDLVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40

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>STP2_MACMU (Q9N1A3) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 137

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR + R  +S S  Q P T +       +SG QS ++P   PP  RH +    HH   +P
Sbjct: 42  CRQSQRGSRSRSSSQSPATHQNPTGAHSSSGLQS-QSPNASPPPKRHKKTMNSHHSPTRP 100

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>BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,|
           intestine and stomach expression 1) (MIST-1)
          Length = 197

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 164 SKHQPPHTRRPARDTSPASGEQSTETPQ 247
           +K++PP  R P +DT    GEQ+ + PQ
Sbjct: 3   TKNRPPRRRTPMQDTEATPGEQTPDRPQ 30

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>FBX27_MOUSE (Q6DIA9) F-box only protein 27|
          Length = 280

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 144 QPTENQSASISRLTPDVLHEILLRLPVSSL-QRLRRTCHQWRGII 275
           +P   +   +SRL P++L  +L  +P  +L    RR C  WR ++
Sbjct: 14  EPDPQEVLDLSRLPPELLLLVLSHVPPRTLLMHCRRVCRAWRALV 58

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>STP2_PANTR (Q9N1A7) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAAN--RKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR ++   +S S  Q P + R       +SG QS ++P   PP  RH +    HH   +P
Sbjct: 37  CRQSHCGSRSRSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPMRP 95

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>STP2_MACFA (Q8WNV1) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 141

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           CR + R  +S S  Q P T +       +SG QS ++P   PP  RH +    HH   +P
Sbjct: 40  CRQSQRGSRSRSSSQSPATHQNPTGAHSSSGCQS-QSPNASPPPKRHKKTMNSHHSPTRP 98

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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 149 NRKSVSKHQPPHTRRPARDTSPASGEQSTETP----QDVPPMARHNQRP 283
           N K  SK  P   RRPA  ++PAS   S  TP    +   P + H Q P
Sbjct: 54  NAKGDSK--PVQQRRPAAPSAPASTSSSAPTPAAPARQASPASAHQQAP 100



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +2

Query: 131 KRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283
           +R  A +  + +    P    PAR  SPAS  Q   TP    P  +   RP
Sbjct: 65  RRPAAPSAPASTSSSAPTPAAPARQASPASAHQQAPTPGAPTPRPQGGARP 115

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>AGRN_RAT (P25304) Agrin precursor|
          Length = 1959

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 176  PPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQ 307
            PP TRRP    + A+      TP    P    + +P LH G+CQ
Sbjct: 1196 PPTTRRPP---TTATNMDRPRTPGHQQPSKSCDSQPCLHGGTCQ 1236

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>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)|
          Length = 434

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 170 HQPPHTRRPARDTSPASGEQSTETPQDVPPMAR---HNQRPLLHH 295
           H PPH + P   + P       E P + PP+     H++ P+ +H
Sbjct: 107 HPPPHEKPPIEYSPPHEKPPVHEPPYEKPPLVHPPPHDKPPIEYH 151

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>PHK_STRAW (Q82NM9) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 793

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +3

Query: 201 EILLRLPVSSLQRLRRTCHQWRGIIS-----DPCFIMDHANRAPEHLLLFLPRLDAST 359
           E+  R P++SL  L  T H WR   +     DP F+    N++PE + ++LP  DA+T
Sbjct: 513 ELAWRAPIASLNYLL-TSHVWRQDHNGFSHQDPGFVDHVLNKSPEAVRVYLPP-DANT 568

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>EMS_DROME (P18488) Homeotic protein empty spiracles|
          Length = 497

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
 Frame = +2

Query: 173 QPPHTRRPARDTSPASGEQSTE------TPQDVPPMARHNQRP-------LLHHGSCQP 310
           QPPHT  P +  SP S + S+       +P   PP  +  Q P       ++H G   P
Sbjct: 202 QPPHT--PPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGP 258

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>VGLG_TRTV (P33495) Major surface glycoprotein G (Attachment glycoprotein G)|
          Length = 391

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 149 NRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHH 295
           N K+ +  +P  T +P    S  +G+ +  T +  PP +  N R +L H
Sbjct: 239 NGKTTTDREPGPTNQP---NSTTNGQHNKHTQRMTPPPSHDNTRTILQH 284

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>DLGP2_HUMAN (Q9P1A6) Disks large-associated protein 2 (DAP-2)|
            (SAP90/PSD-95-associated protein 2) (SAPAP2)
            (PSD-95/SAP90-binding protein 2) (Fragment)
          Length = 1019

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 128  WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETP 244
            WK   +  RK   K  PP  ++P +   P + E+S + P
Sbjct: 938  WKMMESPERKEERKVPPPIPKKPPKGKFPITREKSLDLP 976

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>RDRP_PAV (Q9J7Z2) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
           replicase) (Protein A)
          Length = 973

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 194 PARDTSPASGEQSTETPQDVPPMARHNQR 280
           P  +T   + EQS+ TP+ VP MA H++R
Sbjct: 858 PRVETVEPNHEQSSGTPEVVPEMAGHSER 886

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>RYK1_DROME (Q27324) Tyrosine-protein kinase Drl precursor (EC 2.7.10.1)|
           (Protein derailed)
          Length = 610

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 170 HQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283
           HQ P  +RP    SP     S  + +D  PM R N  P
Sbjct: 201 HQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVP 238

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>XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1)|
            (Strand-exchange protein 1 homolog) (Protein Dhm2)
          Length = 1719

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 140  RAANRKSVSKHQPPHTRR-PARDTSPASGEQSTETPQDVPP 259
            R ANRK+    +   ++  P +   P S E +  TPQ+ PP
Sbjct: 1626 RVANRKNFENKEAQSSQATPLQTNKPGSSEATKMTPQESPP 1666

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>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 173  QPPHTRRPARDTSPASGEQSTETPQDVPP 259
            QPP  + P +  +PA G  S   PQ  PP
Sbjct: 3352 QPPIAQLPIKTCTPAPGTVSNANPQSGPP 3380

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>YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon Tn4556|
          Length = 305

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 131 KRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETP 244
           +RC  A  +S     PP TR P     P+ GE + E P
Sbjct: 254 QRCHRAGLRS-----PPRTREPLWSLGPSGGEAAGEAP 286

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>TOF2_YEAST (Q02208) Topoisomerase 1-associated factor 2|
          Length = 771

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 224 EQSTETPQDVPPMARHNQRPLLHHGSCQPCT 316
           E    TPQ V PM ++N+  + H+ S   C+
Sbjct: 24  EARLNTPQSVSPMVQYNEDIITHNNSINNCS 54

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>AMEL_CAVPO (Q9Z0K9) Amelogenin precursor|
          Length = 226

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
 Frame = +2

Query: 167 KHQPPHTRRPARDTSPASGEQSTETPQD--VPPMARHNQRPLLHHGSCQPCT 316
           +H P HT  P     P    Q    PQ   +P    H+  P  HH    P T
Sbjct: 87  QHPPSHTTLPPHHHIPVGPAQQPVVPQQPLMPVPGHHSMTPNQHHQPNLPPT 138

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>VE7_HPV68 (P54668) Protein E7|
          Length = 110

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 195 LHEILLRL-PVSSLQRLRRTCHQWRGIISDPCFIMDHANRAPEHLLL 332
           + EI+L L P + +Q +   CH+  G   D     DHA    +HLLL
Sbjct: 8   VQEIVLELCPYNEIQPVDLVCHEQLGDSDDEIDEPDHAVNHHQHLLL 54

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>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui|
          Length = 677

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 149 NRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQR 280
           NR+  S+ + P  + PA  T P     +T+T Q  P  + H Q+
Sbjct: 94  NRRFSSRDEQPQQQTPASPTQPQQQTTATQTEQ-TPTHSEHEQQ 136



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 152 RKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283
           +KS  +HQPP  + P +   P       ++PQ  PP  R    P
Sbjct: 330 QKSPQQHQPPPPKSPQQHQPP-----PPKSPQQQPPPQREQTPP 368

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>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)|
          Length = 646

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 180 LTPDVLHEILLRLPVSSLQRLRRTCHQWRGII 275
           L   VL +I   LP  +L  L+ TCH ++GII
Sbjct: 476 LPEHVLVKIFSFLPTRALAALKCTCHHFKGII 507

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>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2|
          Length = 989

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 131 KRCRAANRKSVSKHQPPH-TRRPARDTSPASGEQSTETPQDVPP 259
           K  +AA  K+    +    TRRPA+  +P + E+ +E+P+   P
Sbjct: 290 KEAKAAQAKTAGAAEGEEKTRRPAKAAAPKAREERSESPRSPAP 333

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>FBX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 34-like)|
          Length = 603

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 180 LTPDVLHEILLRLPVSSLQRLRRTCHQWRGII 275
           L   VL +I   LP  +L  L+ TCH ++GII
Sbjct: 476 LPEHVLVKIFSFLPTRALAALKCTCHHFKGII 507

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>FBX24_MOUSE (Q9D417) F-box only protein 24|
          Length = 589

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 138 AEQPTENQSASISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGI 272
           +E+       S+    P+++  I+  LPV  L  L +TCH +  +
Sbjct: 15  SEKKERGNPISVQLFPPELVEHIVSFLPVKDLVALGQTCHYFHEV 59

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>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID|
           domain-containing protein 1A) (SWI/SNF-related,
           matrix-associated, actin-dependent regulator of
           chromatin subfamily F member 1) (SWI-SNF complex protein
           p270) (B120) (SWI-like pr
          Length = 2285

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 167 KHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310
           + QPP++++P   T P +     + PQ  PP  + +Q P     S  P
Sbjct: 480 QQQPPYSQQPPSQT-PHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPP 526

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>V66K_TYYVF (P09506) 66.2 kDa protein (ORF 2)|
          Length = 607

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 152 RKSVSKHQPPHTRRPARDTSPASGEQSTETP 244
           R +  K+QPPH R PA  T  A+   +T TP
Sbjct: 543 RSTTGKYQPPHVRSPASVT--AANCPNTTTP 571

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>PQE1_CAEEL (Q10124) Putative RNA exonuclease pqe-1 (PolyQ enhancer protein 1)|
          Length = 1647

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 50   SFRRKSESRFRCATFIGDKVLGN----GQ*WKRCRAANRKSVSKHQPPHTRRPARDTSPA 217
            S +R+S+SR + +    D+        G    R  + N +  S+  PP  R   R TSP+
Sbjct: 911  SRKRRSDSRSKKSATPTDRRRSRDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRR-TSPS 969

Query: 218  SGEQSTETP 244
             G +S +TP
Sbjct: 970  DGRKSRDTP 978

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>SGPL1_RAT (Q8CHN6) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)|
           (SPL) (Sphingosine-1-phosphate aldolase)
          Length = 568

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -2

Query: 250 VLRSLCRLLTGSRRSISCRTSGVRRLMLAD*FSVGCSASFPSLAISKHLVSYESCAAESA 71
           ++R  C L  G   S  C TSG    +L     + C A +  LA+ K + + E  A ESA
Sbjct: 188 IVRMTCSLFNGGPDSCGCVTSGGTESIL-----MACKA-YRDLALEKGIKTPEIVAPESA 241

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>SGPL1_MOUSE (Q8R0X7) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)|
           (mSPL) (Sphingosine-1-phosphate aldolase)
          Length = 568

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -2

Query: 250 VLRSLCRLLTGSRRSISCRTSGVRRLMLAD*FSVGCSASFPSLAISKHLVSYESCAAESA 71
           ++R  C L  G   S  C TSG    +L     + C A +  LA+ K + + E  A ESA
Sbjct: 188 IVRMTCSLFNGGPDSCGCVTSGGTESIL-----MACKA-YRDLALEKGIKTPEIVAPESA 241

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>DTD_XANCP (Q8P4H1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 146

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -3

Query: 225 SPEAGEVSRAGRLV*GG*CLLTDFRLAALHRFHHWPFPSTLSPMKVAQR--NLLSDLRRK 52
           S EAG+++R+     GG  L++ F LAA  +    P  ST +P + A+R  N L  + R+
Sbjct: 56  SDEAGKMNRSLADTGGGLLLVSQFTLAADTKAGMRPSFSTAAPPEEAERAFNQLVAICRE 115

Query: 51  LSSPGEE 31
             S G E
Sbjct: 116 KHSGGVE 122

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>DLGP2_RAT (P97837) Disks large-associated protein 2 (DAP-2)|
            (SAP90/PSD-95-associated protein 2) (SAPAP2)
            (PSD-95/SAP90-binding protein 2)
          Length = 1059

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 128  WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETP 244
            WK   +  RK   K  PP  ++P +   P + E+S + P
Sbjct: 978  WKIMESPERKEERKIPPPIPKKPPKGKFPITREKSLDLP 1016

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>DLGP2_MOUSE (Q8BJ42) Disks large-associated protein 2 (DAP-2)|
            (SAP90/PSD-95-associated protein 2) (SAPAP2)
            (PSD-95/SAP90-binding protein 2)
          Length = 1059

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 128  WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETP 244
            WK   +  RK   K  PP  ++P +   P + E+S + P
Sbjct: 978  WKIIESPERKEERKIPPPIPKKPPKGKFPITREKSLDLP 1016

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>ASIP_BOVIN (Q29414) Agouti signaling protein precursor (ASP) (Agouti switch|
           protein)
          Length = 133

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +2

Query: 143 AANRKS--VSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQPC 313
           A N+KS  +S+++    +RP++  +P      T  P   P +A  +         C PC
Sbjct: 54  ALNKKSKKISRNEAEKKKRPSKRKAPMKNVARTRPPPPTPCVATRDSCKPPAPACCDPC 112

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>SSB_RALEU (P59927) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 188

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 185 TRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283
           T R A   SPAS ++S  T Q  PP  R   +P
Sbjct: 123 TDRSASQQSPASAQRSAPTGQRQPPARRQPAQP 155

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>ZN265_HUMAN (O95218) Zinc finger protein 265 (Zinc finger, splicing)|
          Length = 337

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 140 RAANRKSVSKHQPPHTRRPARDTSPASGEQSTET 241
           + +NR+S SK +  H+R  +R +SP+S    + +
Sbjct: 196 KKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRS 229

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>YXEQ_BACSU (P54956) Hypothetical protein yxeQ|
          Length = 445

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = +2

Query: 143 AANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQPCTGX 322
           AAN + +    PP       + SP +GE+   + + V  +A H     + H S QP    
Sbjct: 292 AANTERIEVIFPPGGDAALTERSPKAGEEGRFSVEYVIALALHGHGLTVEHFSSQPIPN- 350

Query: 323 XXXXXXXXGRLDKLQD 370
                   GR+ ++ D
Sbjct: 351 --GVQTTMGRIQRVYD 364

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>ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43)|
           (Trithorax-homolog protein 4) (TRX-homolog protein 4)
           (Trithorax 4) (Protein SET DOMAIN GROUP 16)
          Length = 990

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
 Frame = +2

Query: 134 RCRAANRKSVSKHQ------PPHTRRPARDTSPASGEQSTETPQDVP--PMARHNQRPLL 289
           RCR   RK  SK +      P HTR P    S A   Q+  T + VP  P +  + R  L
Sbjct: 782 RCRVFKRKINSKKRIEEEAIPHHTRGPRHHASAAI--QTLNTFRHVPEEPKSFSSFRERL 839

Query: 290 HH 295
           HH
Sbjct: 840 HH 841

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>RPOC2_EUCGG (Q49L08) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta'' subunit) (RNA
            polymerase beta'' subunit)
          Length = 1392

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 141  EQPTENQSASISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIISDPCFIMDHANRAP 317
            E  T     S + L  D L   L++ P+S L++  R      G+ISD   + DH N  P
Sbjct: 855  EAHTSFVEVSTNGLIRDFLRIDLVKFPISYLRK--RNDPSGSGLISDSDNVSDHTNSNP 911

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>CYCL_DROME (O61734) Protein cycle (Brain and muscle ARNT-like 1) (BMAL1)|
           (MOP3)
          Length = 413

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 250 VLRSLCRLLTGSRRSISCR 194
           V +SLCRL  G+RRS  CR
Sbjct: 192 VPQSLCRLCPGARRSFFCR 210

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>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase xnp-1) (X-linked nuclear protein
           1)
          Length = 1359

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +2

Query: 131 KRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQR 280
           KR +    K   + +PP  +RPA+    +S E+  +  ++ P  +    R
Sbjct: 34  KRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSR 83

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>ZN265_RAT (O35986) Zinc finger protein 265 (Zinc finger, splicing)|
          Length = 332

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 140 RAANRKSVSKHQPPHTRRPARDTSPASGEQSTET 241
           + +NR+S SK +  H+R  +R +SP+S    + +
Sbjct: 196 KKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRS 229

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>OXAA_STRCO (O54569) Membrane protein oxaA|
          Length = 431

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 152 RKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283
           R+S S+ Q     +PA +T P +    ++ PQD  P  + + +P
Sbjct: 356 RQSKSQRQA----KPAGETEPKTSLTKSDEPQDAEPAGKQDAKP 395

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>SNPC3_BOVIN (Q5E9M5) snRNA-activating protein complex subunit 3 (SNAPc subunit|
           3) (snRNA-activating protein complex 50 kDa subunit)
           (SNAPc 50 kDa subunit) (Small nuclear RNA-activating
           complex polypeptide 3)
          Length = 412

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 119 GQ*WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDV 253
           G+ W RCR   +  +S  +PP    P  DT   SG +     +D+
Sbjct: 48  GELW-RCRLRGKGDLSLKEPPAPAVPEGDTVADSGREDAAVARDL 91

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 176 PPHTRRPARDTSPAS-GEQSTETPQDVPPMARHNQRP 283
           PPHT      +  AS GE++ +TPQ   P+     RP
Sbjct: 777 PPHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRP 813

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>DTD_XANOR (Q5H5B9) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 146

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -3

Query: 225 SPEAGEVSRAGRLV*GG*CLLTDFRLAALHRFHHWPFPSTLSPMKVAQR--NLLSDLRRK 52
           S +AG+++R+     GG  L++ F LAA     + P  ST +P + A+R  N L D+ R+
Sbjct: 56  SDDAGKMNRSLTDTNGGLLLVSQFTLAADTSSGNRPGFSTAAPPEEAERAFNQLVDICRE 115

Query: 51  LSSPGEE 31
               G E
Sbjct: 116 KHRGGVE 122

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>ERG3_ASHGO (Q754B9) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)|
           (Ergosterol delta 5,6 desaturase)
          Length = 351

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 168 LLTDFRLAALHRFHHWP 118
           L TDF +  LHR+ HWP
Sbjct: 184 LFTDFGIYLLHRWLHWP 200

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>ZN265_MOUSE (Q9R020) Zinc finger protein 265 (Zinc finger, splicing) (Fragment)|
          Length = 326

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 140 RAANRKSVSKHQPPHTRRPARDTSPASGEQSTET 241
           + +NR+S SK +  H+R  +R +SP+S    + +
Sbjct: 196 KKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRS 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,039,708
Number of Sequences: 219361
Number of extensions: 1010136
Number of successful extensions: 4014
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 3800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4008
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result