>PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 235

 Score =  119 bits (299), Expect = 1e-27
 Identities = 62/85 (72%), Positives = 62/85 (72%)
 Frame = +1

Query: 70  KPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFXXXXXXXXXXXXXXXXXXXXXX 249
           KPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTF                      
Sbjct: 17  KPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAATSPPPAA 76

Query: 250 XDIAGLTPCKESKAFAKREKQSVKK 324
            DIAGLTPCKESKAFAKREKQSVKK
Sbjct: 77  ADIAGLTPCKESKAFAKREKQSVKK 101

>PSAF_FLATR (P46486) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 232

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +1

Query: 103 SVSCSASSGDN-NNSTATPSLSASIKTFXXXXXXXXXXXXXXXXXXXXXXXDIAGLTPCK 279
           S+ CS S+ +  NN+    SL A                            DI+GLTPCK
Sbjct: 33  SIVCSGSTDEKINNADGKSSLKA-----LSAALALSSILVSSTVPALPASADISGLTPCK 87

Query: 280 ESKAFAKREKQSVKK 324
           ESK FAKREKQS+KK
Sbjct: 88  ESKQFAKREKQSLKK 102

>PSAF_SPIOL (P12355) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 231

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSVKK 324
           DIAGLTPCKESK FAKREKQ++KK
Sbjct: 78  DIAGLTPCKESKQFAKREKQALKK 101

>PSAF_CUCSA (P42048) Photosystem I reaction center subunit III (Photosystem I|
           18.5 kDa protein) (PSI-F) (PS I subunit 7) (Fragment)
          Length = 26

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSVK 321
           DI+GLTPCKESK F KREKQ  K
Sbjct: 1   DISGLTPCKESKQFXKREKQQXK 23

>PSAF_CHLRE (P12356) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F) (P21 protein)
          Length = 227

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 25/74 (33%), Positives = 33/74 (44%)
 Frame = +1

Query: 100 LSVSCSASSGDNNNSTATPSLSASIKTFXXXXXXXXXXXXXXXXXXXXXXXDIAGLTPCK 279
           L V+C A   +  +   T +L+AS                           DIAGLTPC 
Sbjct: 24  LRVACQAQKNETASKVGT-ALAAS-----------ALAAAVSLSAPSAAMADIAGLTPCS 71

Query: 280 ESKAFAKREKQSVK 321
           ESKA+AK EK+ +K
Sbjct: 72  ESKAYAKLEKKELK 85

>PSAF_PEA (P20119) Photosystem I reaction center subunit III|
           (Light-harvesting complex I 17 kDa protein) (PSI-F)
           (Fragment)
          Length = 20

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +1

Query: 256 IAGLTPCKESKAFAKREKQ 312
           I+GLTPCKESK FAKREKQ
Sbjct: 2   ISGLTPCKESKQFAKREKQ 20

>PSAF_ODOSI (P49483) Photosystem I reaction center subunit III (PSI-F)|
          Length = 185

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 17/24 (70%), Positives = 17/24 (70%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSVKK 324
           DI GLT C ES AF KR K SVKK
Sbjct: 25  DIGGLTKCSESPAFEKRLKASVKK 48

>PSAF_GUITH (O78457) Photosystem I reaction center subunit III (PSI-F)|
          Length = 183

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSVKK 324
           D+AGL PCK SK F +R   SVKK
Sbjct: 23  DVAGLVPCKNSKEFQRRLDSSVKK 46

>PSAF_PORPU (P51193) Photosystem I reaction center subunit III (PSI-F)|
          Length = 185

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSVKK 324
           ++AGL PCK+S AF KR   SVKK
Sbjct: 25  EVAGLIPCKDSAAFNKRMVNSVKK 48

>PSAF_MAIZE (P13193) Photosystem I reaction center subunit III|
           (Light-harvesting complex I 17 kDa protein) (PSI-F)
           (Fragment)
          Length = 20

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 256 IAGLTPCKESKAFAKREK 309
           IAGLTP KESKAFAK EK
Sbjct: 2   IAGLTPPKESKAFAKXEK 19

>PSAF_SYNEN (P0A402) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 164

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSV 318
           D+AGL PCK+S AF KR   +V
Sbjct: 24  DVAGLVPCKDSPAFQKRAAAAV 45

>PSAF_SYNEL (P0A401) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 164

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSV 318
           D+AGL PCK+S AF KR   +V
Sbjct: 24  DVAGLVPCKDSPAFQKRAAAAV 45

>PSAF_CYAPA (P48115) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 186

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSVKK 324
           D+AGL PC +S AF +R K + ++
Sbjct: 26  DVAGLIPCSQSDAFERRLKNTTQR 49

>MXI1_RAT (O09015) MAX-interacting protein 1 (MXI1 protein)|
          Length = 228

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 73  PRL--SRPPARLSVSCSASSGDNNNSTATPS 159
           PRL  S+PP RLS +   SSG +N STA  S
Sbjct: 40  PRLQHSKPPRRLSRAQKHSSGSSNTSTANRS 70

>MXI1_MOUSE (P50540) MAX-interacting protein 1 (MXI1 protein)|
          Length = 228

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 73  PRL--SRPPARLSVSCSASSGDNNNSTATPS 159
           PRL  S+PP RLS +   SSG +N STA  S
Sbjct: 40  PRLQHSKPPRRLSRAQKHSSGSSNTSTANRS 70

>MXI1_HUMAN (P50539) MAX-interacting protein 1 (MXI1 protein)|
          Length = 228

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 73  PRL--SRPPARLSVSCSASSGDNNNSTATPS 159
           PRL  S+PP RLS +   SSG +N STA  S
Sbjct: 40  PRLQHSKPPRRLSRAQKHSSGTSNTSTANRS 70

>I11RA_PONPY (Q5RF19) Interleukin-11 receptor alpha chain precursor|
           (IL-11R-alpha) (IL-11RA)
          Length = 422

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 76  RLSRPPARLSVSCSASSGDNNNSTATPSLSASIKT 180
           +L  PPAR  VSC A+  +N + T +PS  + + T
Sbjct: 108 QLGYPPARPVVSCQAADYENFSCTWSPSQISGLPT 142

>I11RA_HUMAN (Q14626) Interleukin-11 receptor alpha chain precursor|
           (IL-11R-alpha) (IL-11RA)
          Length = 422

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 76  RLSRPPARLSVSCSASSGDNNNSTATPSLSASIKT 180
           +L  PPAR  VSC A+  +N + T +PS  + + T
Sbjct: 108 QLGYPPARPVVSCQAADYENFSCTWSPSQISGLPT 142

>PSAF_SYNP6 (P31083) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 159

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKR 303
           D+AGLTPC ES  F +R
Sbjct: 24  DVAGLTPCSESPRFIQR 40

>PSAF_SYNVU (P23078) Photosystem I reaction center subunit III (PSI-F)|
           (Fragment)
          Length = 27

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 253 DIAGLTPCKESKAFAKREKQSV 318
           D+AGL P K+S AF KR   +V
Sbjct: 1   DVAGLVPAKDSPAFQKRAAAAV 22

>OTX1_BRARE (Q91994) Homeobox protein OTX1 (ZOTX1)|
          Length = 323

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 88  PPARLSVSCSASSGDNNNSTATPSLSASIKT 180
           PPA  S   S+SS  + N+T   S S SI T
Sbjct: 129 PPAVSSAGSSSSSSSSTNNTGISSTSTSIST 159

>NFIC_PIG (P21999) Nuclear factor 1 C-type (Nuclear factor 1/C) (NF1-C)|
           (NFI-C) (NF-I/C) (CCAAT-box-binding transcription
           factor) (CTF) (TGGCA-binding protein)
          Length = 506

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 73  PRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTF 183
           PRL+ PPA    S   SS   + S +TP  S + ++F
Sbjct: 450 PRLALPPATKPTSEGGSSSPTSPSYSTPGTSPANRSF 486

>I11RA_RAT (Q99MF4) Interleukin-11 receptor alpha chain precursor|
           (IL-11R-alpha) (IL-11RA)
          Length = 431

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 76  RLSRPPARLSVSCSASSGDNNNSTATPSLSASIKT 180
           +L  PPAR  VSC A   +N + T +P   + + T
Sbjct: 108 KLGSPPARPEVSCQAVDYENFSCTWSPGRVSGLPT 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.306    0.119    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,684,903
Number of Sequences: 219361
Number of extensions: 81752
Number of successful extensions: 377
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)