ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KCY_MYCPA (Q740D7) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidin... 28 6.8

>KCY_MYCPA (Q740D7) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine|
           monophosphate kinase) (CMP kinase)
          Length = 228

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 167 HLDSSGRFAPLRAAPTA 217
           HLDS+ R +PLRAAP A
Sbjct: 183 HLDSTRRVSPLRAAPDA 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.137    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,388,763
Number of Sequences: 219361
Number of extensions: 87318
Number of successful extensions: 138
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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