ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98h04 |
|---|---|
| Clone Library Name | barley_pub |
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 209 Score = 228 bits (580), Expect = 3e-60 Identities = 113/113 (100%), Positives = 113/113 (100%) Frame = +3 Query: 72 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 251 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF Sbjct: 1 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 60 Query: 252 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 410 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG Sbjct: 61 IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 113
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 216 Score = 151 bits (382), Expect = 3e-37 Identities = 78/119 (65%), Positives = 92/119 (77%), Gaps = 9/119 (7%) Frame = +3 Query: 81 AYAPPMASQVMKSGL---ACSKPRGMSGASLT------RRPRFVVKAVKSDKPTYQVVQP 233 A PMASQ +KSG A P+G+SG +L R F V+A+K++KPTYQV+QP Sbjct: 3 ATTSPMASQ-LKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61 Query: 234 INGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 410 +NGDPFIG LETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPF G Sbjct: 62 LNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAG 120
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 217 Score = 150 bits (378), Expect = 9e-37 Identities = 78/122 (63%), Positives = 94/122 (77%), Gaps = 9/122 (7%) Frame = +3 Query: 72 MATAYAPPMASQVMKSGLACS-----KPRGMSGASLTRRPR----FVVKAVKSDKPTYQV 224 MATA +P ASQ+ S + + P+G+S + L R P F ++A+++DKPT+QV Sbjct: 1 MATATSPT-ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQV 59 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF Sbjct: 60 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 119 Query: 405 TG 410 G Sbjct: 120 AG 121
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 219 Score = 149 bits (375), Expect = 2e-36 Identities = 81/121 (66%), Positives = 92/121 (76%), Gaps = 11/121 (9%) Frame = +3 Query: 81 AYAPPMASQVMKSGLACSK------PRGMSGA----SLTRR-PRFVVKAVKSDKPTYQVV 227 A A PMASQ+ S + S P+G+SGA S T+R F V+AVKSDK T+QVV Sbjct: 3 ASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVV 62 Query: 228 QPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALT 407 QPINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRG+EVGLAHG+ LVGPF Sbjct: 63 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKA 122 Query: 408 G 410 G Sbjct: 123 G 123
>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 88.2 bits (217), Expect = 4e-18 Identities = 41/74 (55%), Positives = 52/74 (70%) Frame = +3 Query: 189 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGL 368 K + SD +VV P DP G+LETPV +SPLV W+++NLPAYR ++P RG+EVG+ Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68 Query: 369 AHGYLLVGPFALTG 410 AHGY L GPFA G Sbjct: 69 AHGYFLFGPFAKLG 82
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 88.2 bits (217), Expect = 4e-18 Identities = 41/74 (55%), Positives = 52/74 (70%) Frame = +3 Query: 189 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGL 368 K + SD +VV P DP G+LETPV +SPLV W+++NLPAYR ++P RG+EVG+ Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68 Query: 369 AHGYLLVGPFALTG 410 AHGY L GPFA G Sbjct: 69 AHGYFLFGPFAKLG 82
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 157 Score = 87.4 bits (215), Expect = 7e-18 Identities = 37/64 (57%), Positives = 48/64 (75%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 QVVQ NGDPF+G L TP++ S ++ NLPAYR +SP+LRG+EVG+AHGY L+GP+ Sbjct: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65 Query: 399 ALTG 410 L G Sbjct: 66 TLLG 69
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 155 Score = 87.0 bits (214), Expect = 9e-18 Identities = 36/64 (56%), Positives = 50/64 (78%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 ++V+P NGDPF+G L TP++ S LV ++ NLPAYR +SP+LRG+EVG+AHGY L+GP+ Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63 Query: 399 ALTG 410 G Sbjct: 64 VKLG 67
>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 86.7 bits (213), Expect = 1e-17 Identities = 36/64 (56%), Positives = 48/64 (75%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 + V+P N DPF+G+L TPVT+S YL NLP YR ++PLLRG+E+G+AHGY L+GPF Sbjct: 5 EFVKPFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPF 64 Query: 399 ALTG 410 + G Sbjct: 65 YILG 68
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 85.9 bits (211), Expect = 2e-17 Identities = 38/64 (59%), Positives = 47/64 (73%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 Q V+P N DPF+G+L TP+T+S LSNLPAYR +SPLLRG+E+G+ HGY LVGPF Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62 Query: 399 ALTG 410 G Sbjct: 63 YKLG 66
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 85.1 bits (209), Expect = 4e-17 Identities = 34/62 (54%), Positives = 46/62 (74%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 ++P +PF+G+L TPV SS + WYL NLP YR +SPLLRG+E+G+AHGY ++GPF Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64 Query: 405 TG 410 G Sbjct: 65 LG 66
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 173 Score = 85.1 bits (209), Expect = 4e-17 Identities = 39/70 (55%), Positives = 48/70 (68%) Frame = +3 Query: 201 SDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGY 380 SD +VV P DP IG LETP+ SSPLV W++ NLPAYR ++ RG+EVG+AHGY Sbjct: 13 SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGY 72 Query: 381 LLVGPFALTG 410 + GPFA G Sbjct: 73 WIFGPFAKLG 82
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 148 Score = 84.3 bits (207), Expect = 6e-17 Identities = 35/64 (54%), Positives = 49/64 (76%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 ++V+P NGDPF+G L TP++ S LV ++ NLPAYR +SP+L G+EVG+AHGY L+GP+ Sbjct: 3 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 62 Query: 399 ALTG 410 G Sbjct: 63 VKLG 66
>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 140 Score = 84.0 bits (206), Expect = 8e-17 Identities = 36/62 (58%), Positives = 44/62 (70%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 ++P N DPF+G L TP+ SS L YLS LP YR VSP LRG+E+G+AHGY L+GPF Sbjct: 5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQ 64 Query: 405 TG 410 G Sbjct: 65 LG 66
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 83.2 bits (204), Expect = 1e-16 Identities = 36/62 (58%), Positives = 46/62 (74%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 ++P N DPF+G L TP+TSS + L NLPAYR ++PLLRG+E+GLAHGY L+GPF Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64 Query: 405 TG 410 G Sbjct: 65 LG 66
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 153 Score = 82.0 bits (201), Expect = 3e-16 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPF 398 + ++P N DPF+G+L TPV++S L NLPAYR +SPLLRG+E+G+AHGY L+GPF Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62 Query: 399 ALTG 410 G Sbjct: 63 DKLG 66
>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 81.6 bits (200), Expect = 4e-16 Identities = 36/62 (58%), Positives = 46/62 (74%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 +Q N DPF+G+L TPV++S L+NLPAYR +SPLLRG+E+G+AHGY LVGPF Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64 Query: 405 TG 410 G Sbjct: 65 LG 66
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 68.6 bits (166), Expect = 3e-12 Identities = 30/57 (52%), Positives = 40/57 (70%) Frame = +3 Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 410 GDP +G+L TP+ +S +++NLP YR +S RG+EVG+AHGY L GPFAL G Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLG 64
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 199 Score = 68.2 bits (165), Expect = 5e-12 Identities = 33/62 (53%), Positives = 43/62 (69%) Frame = +3 Query: 225 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 404 V P++ DP +G+L TPV S +L+NLP YR +SP RG+EVG A GYLL GP+A+ Sbjct: 39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAM 97 Query: 405 TG 410 TG Sbjct: 98 TG 99
>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 66.6 bits (161), Expect = 1e-11 Identities = 28/56 (50%), Positives = 38/56 (67%) Frame = +3 Query: 243 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 410 DP G+L TPV +S + W++ NLP R + RG+E+G+AHGY L+GPFAL G Sbjct: 11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLG 66
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 166 Score = 65.5 bits (158), Expect = 3e-11 Identities = 28/57 (49%), Positives = 40/57 (70%) Frame = +3 Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 410 G P IG+L TP+ SSP +++ LP YR +S RG+E+G+AHG+LL GPF++ G Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILG 66
>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 165 Score = 61.6 bits (148), Expect = 4e-10 Identities = 27/57 (47%), Positives = 37/57 (64%) Frame = +3 Query: 240 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 410 G P IG L TP SSP +++ LP YR +S RG+E+G+AHG+LL GP ++ G Sbjct: 9 GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILG 65
>PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) (Fragment) Length = 20 Score = 31.2 bits (69), Expect = 0.61 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +3 Query: 219 QVVQPINGDPFIGSLETP 272 ++V+P NGDPF+G L TP Sbjct: 3 ELVKPYNGDPFVGHLSTP 20
>DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-.-.-)| (Nitrogen regulation protein nifR3) Length = 324 Score = 31.2 bits (69), Expect = 0.61 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 3/97 (3%) Frame = +3 Query: 96 MASQVMKSGLACSKPR---GMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLE 266 M ++++ + C + G+SGA+L R P ++ +++ +G+++ Sbjct: 92 MGAEIIDINMGCPAKKVTGGLSGAALMRNPDHALRLIEA---------------VVGAVD 136 Query: 267 TPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHG 377 PVT + W L A A G+++ + HG Sbjct: 137 LPVTLKMRLGWDEDQLNAAEIAARAEAAGVKMIVIHG 173
>SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1111 Score = 30.4 bits (67), Expect = 1.0 Identities = 18/97 (18%), Positives = 41/97 (42%) Frame = +3 Query: 18 DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 197 D G + +ED + ++ P+ + SG ++ ++G + V+K + Sbjct: 365 DGTGVVHTAPGFGEEDFYLCQSHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKL 424 Query: 198 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 308 K ++ Q I+ P +TP+ + +WY++ Sbjct: 425 KGQGSWFKTEQYIHNYPHCWRTDTPLIYRTMPSWYVA 461
>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 245 Score = 30.4 bits (67), Expect = 1.0 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +3 Query: 207 KPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVG 365 +PT VV PI+ D I + T V S +V + L+++ + A+S GI VG Sbjct: 164 RPTTGVVIPISIDSLINRIRTMVQSKLVVGFGLNSIEDIKKAMSVGADGIAVG 216
>PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease)| Length = 502 Score = 30.4 bits (67), Expect = 1.0 Identities = 22/75 (29%), Positives = 30/75 (40%) Frame = -1 Query: 238 LMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 59 LMGW Y G + A A D + HA+ + +TW+ + A AVA+ Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292 Query: 58 FDSHTLNSALPAASN 14 N AL A N Sbjct: 293 IAYFNNNPALAGAVN 307
>PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 248 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 77 HCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGCQV 202 H +C + + G L+ A R AH APLR GC+V Sbjct: 91 HAVCIVPEKREERTTEGGLEVAREENRLAHFIAPLREVGCRV 132
>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 28.9 bits (63), Expect = 3.0 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGHVRR 157 Q+ VE G GG GH +C GD L VL+A G R+ Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALGRDRQ 359
>RNF41_BRARE (Q7ZW16) RING finger protein 41| Length = 318 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -3 Query: 86 ICSGHLDVLLRLPHAQ--LCSACSVKW 12 ICSG L+ +R PH + C+AC +W Sbjct: 20 ICSGVLEEPVRAPHCEHAFCNACITQW 46
>SYI_WOLTR (Q5GSS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1134 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/97 (17%), Positives = 40/97 (41%) Frame = +3 Query: 18 DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 197 D G + +ED + ++ P + SG ++ ++G + ++K + Sbjct: 373 DGTGVVHTAPGFGEEDFYLCQSHDIPAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKL 432 Query: 198 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 308 K ++ Q I+ P +TP+ + +WY++ Sbjct: 433 KEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVA 469
>Y449_MYCBO (P0A5C8) Hypothetical protein Mb0449c| Length = 142 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 71 DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 196 DG S G D R GV+ + R A P++P +GC Sbjct: 91 DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132
>Y441_MYCTU (P0A5C7) Hypothetical protein Rv0441c/MT0457| Length = 142 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 71 DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 196 DG S G D R GV+ + R A P++P +GC Sbjct: 91 DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132
>VGLD_HHV1H (P06476) Glycoprotein D precursor| Length = 393 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -1 Query: 163 SEAPDMPRGLEH---AKP--LFITWLAMGGAYAVAISMSSFDSHTLNSALPA 23 SEAP + RG +P L I W MGG A+ I++ + + N +L A Sbjct: 99 SEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 150
>PUTP_ECOLI (P07117) Sodium/proline symporter (Proline permease)| Length = 502 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/75 (28%), Positives = 30/75 (40%) Frame = -1 Query: 238 LMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 59 LMGW Y G + A A D + HA+ + +TW+ + A AVA+ Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292 Query: 58 FDSHTLNSALPAASN 14 + AL A N Sbjct: 293 IAYFNDHPALAGAVN 307
>CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 335 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 3 HIHPFDAAGRAELSVWESKEDIEMATAYAPPMASQVMKSG 122 H+ AAG AE ESK + +A PP+ Q++ +G Sbjct: 186 HVDEVFAAGMAEWLASESKLPVRLARDGEPPIPGQILLAG 225
>VGLD_HHV1P (P57083) Glycoprotein D precursor| Length = 394 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -1 Query: 163 SEAPDMPRGLEH---AKP--LFITWLAMGGAYAVAISMSSFDSHTLNSALPA 23 SEAP + RG +P L I W MGG A+ I++ + + N +L A Sbjct: 100 SEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 151
>VGLD_HHV11 (Q69091) Glycoprotein D precursor| Length = 394 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -1 Query: 163 SEAPDMPRGLEH---AKP--LFITWLAMGGAYAVAISMSSFDSHTLNSALPA 23 SEAP + RG +P L I W MGG A+ I++ + + N +L A Sbjct: 100 SEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 151
>MTX1_XANCR (P96188) Modification methylase XamI (EC 2.1.1.72)| (Adenine-specific methyltransferase XamI) (M.XamI) Length = 527 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 2/115 (1%) Frame = +3 Query: 6 IHPFDAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFV 185 + P +GR L+ E+ D ++ P+A+ ++++ L S T R + Sbjct: 100 VDPGAGSGRFILAAGEAFPDAQLVAVEMDPLAALMLRANL--------SARGWTDRATVM 151 Query: 186 VKAVKSDK--PTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPL 344 VK + K P + I P++ + AWY SN Y S L Sbjct: 152 VKDYREVKLPPCAGITAFIGNPPYVRHHD---IGEDWKAWYASNFAGYGIKASAL 203
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -1 Query: 220 WYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPL 116 W+VG S+L L+T +G ++ ++ H+K L Sbjct: 111 WFVGCSELAGLSTCKGRKLKSGDELVFTFPHSKGL 145
>GLMM_XANC5 (Q3BRL9) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 145 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALG 355
>GLMM_XYLFT (Q87DJ6) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 448 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGH 148 Q+ VE GV GG GH +C GD L VL+ H Sbjct: 315 QALVESGGVLGGEASGHLLCLDRATTGDGIVSALQVLEVLRH 356
>GLMM_XYLFA (Q9PDB1) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 448 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGH 148 Q+ VE GV GG GH +C GD L VL+ H Sbjct: 315 QALVESGGVLGGEASGHLLCLDRATTGDGIVSALQVLEVLRH 356
>VGLD_HHV1A (P36318) Glycoprotein D precursor| Length = 394 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = -1 Query: 163 SEAPDMPRG-----LEHAKPLFITWLAMGGAYAVAISMSSFDSHTLNSALPA 23 SEAP + RG + L I W MGG A+ I++ + + N +L A Sbjct: 100 SEAPQIVRGGSEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 151
>MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 354 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 33 AELSVWESKEDIEMATAYAPPMASQVMKSG 122 A L+VWE ++D AT A A+ +MKSG Sbjct: 206 ARLTVWELQQDGIDATLIADSAAAHLMKSG 235
>FABZ_SYNPX (Q7U8Q6) (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase| (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase) Length = 156 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 9/60 (15%) Frame = -1 Query: 286 GLEVTGVSRLPMN---------GSPLMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGL 134 G+ TG+ + +N G PLM G+ + A+ GL V++ PD+P+GL Sbjct: 43 GVSATGIKNVTVNEPQFQGHFPGRPLMP------GVLIVEAMAQVGGLIVTQMPDLPKGL 96
>TGT_PSEAE (Q9HXH9) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 372 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Frame = +3 Query: 15 FDAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKA 194 FD LSV E KE++ + PP + KPR + G +P +V+ Sbjct: 205 FDGLAIGGLSVGEPKEEMIRVLDFLPPQ--------MPADKPRYLMGVG---KPEDLVEG 253 Query: 195 VKSDKPTYQVVQPI----NGDPFIGS 260 V+ + V P NG F+ S Sbjct: 254 VRRGVDMFDCVMPTRNARNGHLFVDS 279
>MAGC1_HUMAN (O60732) Melanoma-associated antigen C1 (MAGE-C1 antigen)| (Cancer-testis antigen CT7) Length = 1142 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +3 Query: 87 APPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLE 266 +PP + P+G S P+ + S P Y P+ G+ F SL+ Sbjct: 567 SPPQGEDSLSPHYFPQSPQGEDSLSPHYFPQSPPQGEDSMSPLYFPQSPLQGEEFQSSLQ 626 Query: 267 TPVT 278 +PV+ Sbjct: 627 SPVS 630
>RBGPR_CAEEL (Q22670) Rab3 GTPase-activating protein regulatory subunit (Rab3| GTPase-activating protein 2) Length = 1307 Score = 27.3 bits (59), Expect = 8.8 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%) Frame = +3 Query: 30 RAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGAS---LTRRPRFVVKAVK 200 + + VW+ D E A + + +++ L + S A +T RFVV Sbjct: 58 KENVEVWDDWGDKEEGAAENSLESDESIRNWLFRCDLKTYSDAEYLLVTWESRFVVLRKP 117 Query: 201 SDKPTYQVV--QPINGDPFIGSLETPVTSSPLVAWYLSNL 314 D+P Y++V Q I GDP + +T+S + LSN+ Sbjct: 118 PDEPVYKIVCKQYIEGDP----ISNEITASSIFG--LSNV 151
>GLMM_PSEPK (Q88DV3) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 446 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 Query: 38 VERVGVEGGHRDGHCICSSHGEPGD 112 +ER + GG GH +C +H GD Sbjct: 315 LEREWLVGGENSGHVVCCNHTTTGD 339
>GLMM_XANOR (Q5GXR8) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 145 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRATTGDGIVSALQVLEALG 355
>GLMM_XANCP (Q8P7S2) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 145 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRATTGDGIVSALQVLEALG 355
>GLMM_XANC8 (Q4UWC8) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 29 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 145 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRATTGDGIVSALQVLEALG 355
>GLUQ_ECOLI (P27305) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 298 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +2 Query: 23 CRQSRVERVGVEGGHRDGHCICSSHGEPGDEERL----GVLQAAGHVRRFAHPEAPLRRQ 190 C ++R++ +G G DGHC HG R+ V Q +R H + L R+ Sbjct: 103 CTRARIQSIG---GIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLARE 159
>GLUQ_ECO57 (Q8X909) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 308 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +2 Query: 23 CRQSRVERVGVEGGHRDGHCICSSHGEPGDEERL----GVLQAAGHVRRFAHPEAPLRRQ 190 C ++R++ +G G DGHC HG R+ V Q +R H + L R+ Sbjct: 113 CTRARIQSIG---GIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLARE 169
>VRK2_MOUSE (Q8BN21) Serine/threonine-protein kinase VRK2 (EC 2.7.11.1)| (Vaccinia-related kinase 2) Length = 503 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = +3 Query: 48 WESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVV 227 WE+K D +A A + + P G S + L + +V DKP YQ + Sbjct: 250 WEAKLDDPVAVQTAKTNLLDELPESVLKWAPSGSSCSELVKYLMYVHNLAYDDKPDYQKL 309 Query: 228 QPI---NGDPFIGSLE 266 + I +G P +G LE Sbjct: 310 KKILNPDGVP-LGPLE 324
>STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sensitive| alpha-factor receptor and arginine permease (Vacuolar protein sorting-associated protein VPS23) Length = 385 Score = 27.3 bits (59), Expect = 8.8 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 4/29 (13%) Frame = -1 Query: 79 VAISMSSFDSHTLNSALPAA----SNGWM 5 ++I++ +FD +T++S+LP SNGW+ Sbjct: 98 ISINLENFDMNTISSSLPIQEYIDSNGWI 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,780,386 Number of Sequences: 219361 Number of extensions: 933593 Number of successful extensions: 3407 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 3332 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3406 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
