ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_973635.1| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, s... 48 0.011
2ref|XM_135146.8| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, s... 48 0.011
3ref|XM_920725.2| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, s... 48 0.011
4ref|XM_908064.2| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, s... 48 0.011
5dbj|AK135876.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 48 0.011
6dbj|AK142362.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 48 0.011
7dbj|AB093258.1| Mus musculus mRNA for mKIAA0678 protein 48 0.011
8gb|L14864.1|PDEETFAB Paracoccus denitrificans electron transfer ... 46 0.043
9gb|AY781905.1| Saccharum hybrid cultivar isolate c511 stem-speci... 44 0.17
10gb|AY781900.1| Saccharum hybrid cultivar isolate c51 stem-specif... 44 0.17
11gb|AY781892.1| Saccharum hybrid cultivar isolate c512 stem-speci... 44 0.17
12ref|XM_915655.2| PREDICTED: Mus musculus inositol 1,4,5-trisphos... 44 0.17
13ref|XM_900404.2| PREDICTED: Mus musculus inositol 1,4,5-trisphos... 44 0.17
14ref|XM_205854.7| PREDICTED: Mus musculus inositol 1,4,5-trisphos... 44 0.17
15ref|XM_858938.1| PREDICTED: Canis familiaris similar to Butyrate... 44 0.17
16ref|XM_858920.1| PREDICTED: Canis familiaris similar to Butyrate... 44 0.17
17ref|XM_846472.1| PREDICTED: Canis familiaris similar to Butyrate... 44 0.17
18gb|AC121838.2| Mus musculus BAC clone RP24-74O18 from 1, complet... 44 0.17
19dbj|AK046612.1| Mus musculus 4 days neonate male adipose cDNA, R... 44 0.17
20dbj|AK053759.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 44 0.17
21gb|AF217189.1|AF217189 Sorangium cellulosum putative transposase... 44 0.17
22gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epoth... 44 0.17
23ref|XM_482905.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.7
24gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, comp... 40 2.7
25ref|XM_359936.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 2.7
26ref|XM_883392.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 2.7
27gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, com... 40 2.7
28ref|XM_883491.1| Leishmania major strain Friedlin hypothetical p... 40 2.7
29emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 40 2.7
30gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosom... 40 2.7
31ref|NM_132676.2| Drosophila melanogaster toothrin CG12175-RB (tt... 40 2.7
32gb|AY069245.1| Drosophila melanogaster GM01964 full length cDNA 40 2.7
33gb|AY061619.1| Drosophila melanogaster SD08423 full length cDNA 40 2.7
34gb|AC160960.5| Mus musculus BAC clone RP24-230O19 from chromosom... 40 2.7
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
36gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, r... 40 2.7
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.7
38dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 2.7
40gb|AE003493.3| Drosophila melanogaster chromosome X, section 45 ... 40 2.7
41gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, comple... 40 2.7 
>ref|XM_973635.1| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 13
            (Dnajc13), mRNA
          Length = 8346

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 42   cagggtcacagtagcactagcttcagctagct 73
            ||||||| |||||||||||||| |||||||||
Sbjct: 5469 cagggtctcagtagcactagctacagctagct 5438
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>ref|XM_135146.8| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 13,
            transcript variant 1 (Dnajc13), mRNA
          Length = 8346

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 42   cagggtcacagtagcactagcttcagctagct 73
            ||||||| |||||||||||||| |||||||||
Sbjct: 5469 cagggtctcagtagcactagctacagctagct 5438
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>ref|XM_920725.2| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 13,
            transcript variant 5 (Dnajc13), mRNA
          Length = 4745

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 42   cagggtcacagtagcactagcttcagctagct 73
            ||||||| |||||||||||||| |||||||||
Sbjct: 1868 cagggtctcagtagcactagctacagctagct 1837
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>ref|XM_908064.2| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 13,
            transcript variant 2 (Dnajc13), mRNA
          Length = 7767

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 42   cagggtcacagtagcactagcttcagctagct 73
            ||||||| |||||||||||||| |||||||||
Sbjct: 4890 cagggtctcagtagcactagctacagctagct 4859
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>dbj|AK135876.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420431H04 product:DnaJ (Hsp40)
           homolog, subfamily C, member 13, full insert sequence
          Length = 3513

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 42  cagggtcacagtagcactagcttcagctagct 73
           ||||||| |||||||||||||| |||||||||
Sbjct: 961 cagggtctcagtagcactagctacagctagct 930
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>dbj|AK142362.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430021J01 product:DnaJ (Hsp40) homolog,
            subfamily C, member 13, full insert sequence
          Length = 3551

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 42   cagggtcacagtagcactagcttcagctagct 73
            ||||||| |||||||||||||| |||||||||
Sbjct: 1011 cagggtctcagtagcactagctacagctagct 980
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>dbj|AB093258.1| Mus musculus mRNA for mKIAA0678 protein
          Length = 3618

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 42   cagggtcacagtagcactagcttcagctagct 73
            ||||||| |||||||||||||| |||||||||
Sbjct: 1059 cagggtctcagtagcactagctacagctagct 1028
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>gb|L14864.1|PDEETFAB Paracoccus denitrificans electron transfer flavoprotein alpha and
            beta subunit genes, complete cds's
          Length = 2440

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 175  gccgccgaggaggccgcgaagat 197
            |||||||||||||||||||||||
Sbjct: 1298 gccgccgaggaggccgcgaagat 1320
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>gb|AY781905.1| Saccharum hybrid cultivar isolate c511 stem-specific protein mRNA,
           complete cds
          Length = 1000

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 101 caatggccaccgctgatgtccagaacccgacggccgcgctgacggaggaggcgccggcgg 160
           |||||||||| || || ||||||| |||||| | || |  ||| ||||||||||| | ||
Sbjct: 122 caatggccactgccgaggtccagaccccgaccgtcgtggcgaccgaggaggcgcccgtgg 181

                     
Query: 161 tggagacgcc 170
           ||||||||||
Sbjct: 182 tggagacgcc 191
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>gb|AY781900.1| Saccharum hybrid cultivar isolate c51 stem-specific protein mRNA,
           complete cds
          Length = 1007

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 101 caatggccaccgctgatgtccagaacccgacggccgcgctgacggaggaggcgccggcgg 160
           |||||||||| || || ||||||| |||||| | || |  ||| ||||||||||| | ||
Sbjct: 127 caatggccactgccgaggtccagaccccgaccgtcgtggcgaccgaggaggcgcccgtgg 186

                     
Query: 161 tggagacgcc 170
           ||||||||||
Sbjct: 187 tggagacgcc 196
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>gb|AY781892.1| Saccharum hybrid cultivar isolate c512 stem-specific protein mRNA,
           complete cds
          Length = 955

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 101 caatggccaccgctgatgtccagaacccgacggccgcgctgacggaggaggcgccggcgg 160
           |||||||||| || || ||||||| |||||| | || |  ||| ||||||||||| | ||
Sbjct: 121 caatggccactgccgaggtccagaccccgaccgtcgtggcgaccgaggaggcgcccgtgg 180

                     
Query: 161 tggagacgcc 170
           ||||||||||
Sbjct: 181 tggagacgcc 190
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>ref|XM_915655.2| PREDICTED: Mus musculus inositol 1,4,5-trisphosphate 3-kinase B,
           transcript variant 3 (Itpkb), mRNA
          Length = 5090

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 144 ggaggaggcgccggcggtggag 165
           ||||||||||||||||||||||
Sbjct: 435 ggaggaggcgccggcggtggag 456
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>ref|XM_900404.2| PREDICTED: Mus musculus inositol 1,4,5-trisphosphate 3-kinase B,
           transcript variant 2 (Itpkb), mRNA
          Length = 6656

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 144 ggaggaggcgccggcggtggag 165
           ||||||||||||||||||||||
Sbjct: 444 ggaggaggcgccggcggtggag 465
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>ref|XM_205854.7| PREDICTED: Mus musculus inositol 1,4,5-trisphosphate 3-kinase B,
           transcript variant 1 (Itpkb), mRNA
          Length = 5101

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 144 ggaggaggcgccggcggtggag 165
           ||||||||||||||||||||||
Sbjct: 444 ggaggaggcgccggcggtggag 465
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>ref|XM_858938.1| PREDICTED: Canis familiaris similar to Butyrate response factor 2
           (TIS11D protein) (EGF-response factor 2) (ERF-2),
           transcript variant 3 (LOC609810), mRNA
          Length = 1690

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 156 ggcggtggagacgcccgtggccgccg 181
           |||||||| |||||||||||||||||
Sbjct: 389 ggcggtggggacgcccgtggccgccg 414
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>ref|XM_858920.1| PREDICTED: Canis familiaris similar to Butyrate response factor 2
           (TIS11D protein) (EGF-response factor 2) (ERF-2),
           transcript variant 2 (LOC609810), mRNA
          Length = 1514

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 156 ggcggtggagacgcccgtggccgccg 181
           |||||||| |||||||||||||||||
Sbjct: 389 ggcggtggggacgcccgtggccgccg 414
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>ref|XM_846472.1| PREDICTED: Canis familiaris similar to Butyrate response factor 2
           (TIS11D protein) (EGF-response factor 2) (ERF-2),
           transcript variant 1 (LOC609810), mRNA
          Length = 1796

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 156 ggcggtggagacgcccgtggccgccg 181
           |||||||| |||||||||||||||||
Sbjct: 389 ggcggtggggacgcccgtggccgccg 414
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>gb|AC121838.2| Mus musculus BAC clone RP24-74O18 from 1, complete sequence
          Length = 180961

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 144    ggaggaggcgccggcggtggag 165
              ||||||||||||||||||||||
Sbjct: 117503 ggaggaggcgccggcggtggag 117482
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>dbj|AK046612.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430205M18 product:INOSITOL
           1,4,5-TRISPHOSPHATE 3-KINASE, ISOFORM B (EC 2.7.1.127)
           homolog [Rattus norvegicus], full insert sequence
          Length = 1883

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 144 ggaggaggcgccggcggtggag 165
           ||||||||||||||||||||||
Sbjct: 394 ggaggaggcgccggcggtggag 415
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>dbj|AK053759.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130307H12 product:INOSITOL
           1,4,5-TRISPHOSPHATE 3-KINASE, ISOFORM B (EC 2.7.1.127)
           homolog [Rattus norvegicus], full insert sequence
          Length = 2384

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 144 ggaggaggcgccggcggtggag 165
           ||||||||||||||||||||||
Sbjct: 393 ggaggaggcgccggcggtggag 414
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>gb|AF217189.1|AF217189 Sorangium cellulosum putative transposase gene, partial cds; putative
             transposase gene, complete cds; epothilone biosynthesis
             gene cluster, complete sequence; putative membrane protein
             gene, complete cds
          Length = 58733

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   ggaggaggcgccggcggtggag 165
             ||||||||||||||||||||||
Sbjct: 43746 ggaggaggcgccggcggtggag 43767



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   ggaggaggcgccggcggtggag 165
             ||||||||||||||||||||||
Sbjct: 39270 ggaggaggcgccggcggtggag 39291
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>gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epothilone biosynthesis gene
             cluster, complete sequence
          Length = 68750

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   ggaggaggcgccggcggtggag 165
             ||||||||||||||||||||||
Sbjct: 49358 ggaggaggcgccggcggtggag 49379



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   ggaggaggcgccggcggtggag 165
             ||||||||||||||||||||||
Sbjct: 44882 ggaggaggcgccggcggtggag 44903
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>ref|XM_482905.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1197

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gaggaggcgccggcggtgga 164
           ||||||||||||||||||||
Sbjct: 970 gaggaggcgccggcggtgga 989
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>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence
          Length = 175836

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     acaacagggtcacagtagca 57
              ||||||||||||||||||||
Sbjct: 118284 acaacagggtcacagtagca 118303
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>ref|XM_359936.1| Magnaporthe grisea 70-15 hypothetical protein (MG04841.4) partial
           mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 tgacggaggaggcgccggcggtgg 163
           ||||||||||||| ||||||||||
Sbjct: 673 tgacggaggaggcaccggcggtgg 650
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>ref|XM_883392.1| PREDICTED: Bos taurus hypothetical protein LOC618829 (LOC618829),
           mRNA
          Length = 825

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 ccagaacccgacggccgcgc 139
           ||||||||||||||||||||
Sbjct: 628 ccagaacccgacggccgcgc 647
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>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence
          Length = 157233

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacagggtcacagtagca 57
           ||||||||||||||||||||
Sbjct: 957 acaacagggtcacagtagca 976
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>ref|XM_883491.1| Leishmania major strain Friedlin hypothetical protein (L2969.06)
            partial mRNA
          Length = 9039

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 170  ccgtggccgccgaggaggccgcga 193
            ||||||||||||| ||||||||||
Sbjct: 4721 ccgtggccgccgatgaggccgcga 4744
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>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    ccgtggccgccgaggaggccgcga 193
              ||||||||||||| ||||||||||
Sbjct: 195391 ccgtggccgccgatgaggccgcga 195368
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>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     cagtagcactagcttcagctagct 73
              |||||||||||||| |||||||||
Sbjct: 190075 cagtagcactagctacagctagct 190052
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>ref|NM_132676.2| Drosophila melanogaster toothrin CG12175-RB (tth), mRNA
          Length = 2908

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  ggaggaggcgccggcggtgg 163
            ||||||||||||||||||||
Sbjct: 1206 ggaggaggcgccggcggtgg 1225
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>gb|AY069245.1| Drosophila melanogaster GM01964 full length cDNA
          Length = 1861

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 ggaggaggcgccggcggtgg 163
           ||||||||||||||||||||
Sbjct: 141 ggaggaggcgccggcggtgg 160
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>gb|AY061619.1| Drosophila melanogaster SD08423 full length cDNA
          Length = 2946

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  ggaggaggcgccggcggtgg 163
            ||||||||||||||||||||
Sbjct: 1206 ggaggaggcgccggcggtgg 1225
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>gb|AC160960.5| Mus musculus BAC clone RP24-230O19 from chromosome 13, complete
             sequence
          Length = 152915

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    agccacaggcacacaacagggtca 49
             ||||||||||| ||||||||||||
Sbjct: 65171 agccacaggcagacaacagggtca 65148
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      gaggaggcgccggcggtgga 164
                ||||||||||||||||||||
Sbjct: 23253676 gaggaggcgccggcggtgga 23253657
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>gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone
              BACR30C16, complete sequence
          Length = 185810

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ggaggaggcgccggcggtgg 163
              ||||||||||||||||||||
Sbjct: 106960 ggaggaggcgccggcggtgg 106941
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 129     gacggccgcgctgacggagg 148
               ||||||||||||||||||||
Sbjct: 3508361 gacggccgcgctgacggagg 3508380
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>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0013B04
          Length = 141319

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   gaggaggcgccggcggtgga 164
             ||||||||||||||||||||
Sbjct: 53027 gaggaggcgccggcggtgga 53008
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 143     cggaggaggcgccggcggtggaga 166
               |||||||||||||| |||||||||
Sbjct: 5300946 cggaggaggcgccgccggtggaga 5300969
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>gb|AE003493.3| Drosophila melanogaster chromosome X, section 45 of 74 of the complete
             sequence
          Length = 307761

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ggaggaggcgccggcggtgg 163
             ||||||||||||||||||||
Sbjct: 59667 ggaggaggcgccggcggtgg 59648
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>gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, complete sequence
          Length = 177964

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     cagtagcactagcttcagctagct 73
              |||||||||||||| |||||||||
Sbjct: 114215 cagtagcactagctacagctagct 114238


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,648,605
Number of Sequences: 3902068
Number of extensions: 1648605
Number of successful extensions: 133410
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 132940
Number of HSP's gapped (non-prelim): 472
length of query: 210
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 188
effective length of database: 17,147,199,772
effective search space: 3223673557136
effective search space used: 3223673557136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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