Clone Information

BLAST Search Result

Clone Name	baet98g09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	218	3e-57
2	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	181	3e-46
3	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	181	4e-46
4	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	178	2e-45
5	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	178	3e-45
6	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	177	4e-45
7	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	174	6e-44
8	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	173	1e-43
9	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	171	3e-43
10	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	170	8e-43
11	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	150	5e-37
12	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	149	2e-36
13	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	148	3e-36
14	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	145	2e-35
15	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	144	4e-35
16	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	144	4e-35
17	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	144	5e-35
18	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	144	6e-35
19	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	144	6e-35
20	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	144	6e-35
21	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	143	8e-35
22	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	143	8e-35
23	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	143	8e-35
24	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	143	8e-35
25	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	143	1e-34
26	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	142	1e-34
27	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	142	2e-34
28	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	142	2e-34
29	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	142	2e-34
30	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	142	2e-34
31	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	141	4e-34
32	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	141	4e-34
33	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	140	5e-34
34	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	140	5e-34
35	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	140	7e-34
36	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	140	7e-34
37	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	140	9e-34
38	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	140	9e-34
39	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	139	1e-33
40	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	139	2e-33
41	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	137	5e-33
42	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	137	6e-33
43	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	136	1e-32
44	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	136	1e-32
45	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	135	2e-32
46	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	135	2e-32
47	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	134	5e-32
48	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	134	7e-32
49	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	133	9e-32
50	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	123	9e-29
51	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	123	9e-29
52	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	117	8e-27
53	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	116	1e-26
54	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	113	9e-26
55	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	110	8e-25
56	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	108	3e-24
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	83	1e-16
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	73	1e-13
59	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	65	5e-11
60	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	64	1e-10
61	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	57	1e-08
62	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	57	1e-08
63	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	56	2e-08
64	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	54	1e-07
65	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	53	2e-07
66	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	52	3e-07
67	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	50	1e-06
68	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	47	1e-05
69	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	37	0.009
70	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	37	0.011
71	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	35	0.042
72	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	33	0.12
73	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	33	0.12
74	FTSZ_AGRTU (O30992) Cell division protein ftsZ	32	0.27
75	FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein ...	30	1.0
76	FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein ...	30	1.4
77	FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein ...	30	1.4
78	FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein ...	30	1.4
79	MCPH1_HUMAN (Q8NEM0) Microcephalin	30	1.8
80	GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Glucona...	29	2.3
81	GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Glucona...	29	2.3
82	ACK2_BOVIN (O02742) Activated CDC42 kinase 2 (EC 2.7.10.2) (ACK-2)	29	2.3
83	RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)	29	3.0
84	MCPH1_MACFA (Q5IFK1) Microcephalin	29	3.0
85	MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (L...	28	4.0
86	FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein ...	28	4.0
87	MCPH1_PANTR (P61593) Microcephalin	28	4.0
88	MCPH1_PONPY (P61594) Microcephalin	28	5.2
89	MCPH1_COLGU (P61590) Microcephalin	28	5.2
90	GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose...	28	5.2
91	PIV6_ADES1 (Q8JN68) Minor capsid protein 6 precursor (Minor caps...	28	5.2
92	VP40_EBV (P03234) Capsid protein P40 (Virion structural protein ...	28	6.8
93	PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a ...	28	6.8
94	HBL1_CAEEL (Q9XYD3) Hunchback-like protein	28	6.8
95	LGRC_BREPA (Q70LM5) Linear gramicidin synthetase subunit C [Incl...	27	8.8
96	DUT_HHV11 (P10234) Deoxyuridine 5'-triphosphate nucleotidohydrol...	27	8.8
97	AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic sub...	27	8.8
98	YG22_YEAST (P53235) Hypothetical 71.3 kDa protein in SCM4-MUP1 i...	27	8.8
99	ASB13_MOUSE (Q8VBX0) Ankyrin repeat and SOCS box protein 13 (ASB...	27	8.8
100	ASB13_HUMAN (Q8WXK3) Ankyrin repeat and SOCS box protein 13 (ASB...	27	8.8
101	G6PIB_ORYSA (P42863) Glucose-6-phosphate isomerase, cytosolic B ...	27	8.8
102	G6PIA_ORYSA (P42862) Glucose-6-phosphate isomerase, cytosolic A ...	27	8.8
103	DHE4_SACBA (Q8TFF6) NADP-specific glutamate dehydrogenase 1 (EC ...	27	8.8
104	L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor...	27	8.8
105	GCST_STRAW (Q82JI2) Aminomethyltransferase (EC 2.1.2.10) (Glycin...	27	8.8
106	DOCK_SULAC (P27414) Probable signal recognition particle protein...	27	8.8
107	AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic s...	27	8.8
108	AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic s...	27	8.8

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  218 bits (555), Expect = 3e-57
 Identities = 102/106 (96%), Positives = 104/106 (98%)
 Frame = +1

Query: 91  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 270
           LHQTTSFLGTAPRRD+LVR VGD GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS
Sbjct: 6   LHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 65

Query: 271 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           YLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCV
Sbjct: 66  YLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCV 111



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFG 224

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  181 bits (460), Expect = 3e-46
 Identities = 82/93 (88%), Positives = 89/93 (95%)
 Frame = +1

Query: 130 RDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 309
           +++LVR VG  GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 310 TAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           TAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCV 112

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  181 bits (459), Expect = 4e-46
 Identities = 87/107 (81%), Positives = 96/107 (89%), Gaps = 3/107 (2%)
 Frame = +1

Query: 97  QTTSFLGTA--PRRDDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 267
           Q ++F+G A    +++ +R VG+FG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7   QQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCV 113

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  178 bits (452), Expect = 2e-45
 Identities = 84/106 (79%), Positives = 93/106 (87%), Gaps = 2/106 (1%)
 Frame = +1

Query: 97  QTTSFLGTAP--RRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 270
           Q+++F G     +RD+LVR VG   GR +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPS
Sbjct: 7   QSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPS 66

Query: 271 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+
Sbjct: 67  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCI 112

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  178 bits (451), Expect = 3e-45
 Identities = 86/107 (80%), Positives = 93/107 (86%), Gaps = 3/107 (2%)
 Frame = +1

Query: 97  QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 267
           Q ++F G    +  ++LVR +G FGG R TMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7   QQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCV 113

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  177 bits (450), Expect = 4e-45
 Identities = 83/94 (88%), Positives = 88/94 (93%), Gaps = 1/94 (1%)
 Frame = +1

Query: 130 RDDLVRSVGDF-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGW 306
           +++LVR +G F GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGW
Sbjct: 20  QNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGW 79

Query: 307 DTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           DTAGLSADPETFA+NRELEVIH RWAMLGALGCV
Sbjct: 80  DTAGLSADPETFARNRELEVIHCRWAMLGALGCV 113

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  174 bits (440), Expect = 6e-44
 Identities = 82/107 (76%), Positives = 92/107 (85%), Gaps = 3/107 (2%)
 Frame = +1

Query: 97  QTTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 267
           Q++S  G     P++++LV+ VG    RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TP
Sbjct: 8   QSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTP 67

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 68  SYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCV 114

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  173 bits (438), Expect = 1e-43
 Identities = 83/106 (78%), Positives = 91/106 (85%), Gaps = 3/106 (2%)
 Frame = +1

Query: 97  QTTSFLGTAPRR--DDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 267
           Q ++F G    R  ++ +R  G+FG  R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ P
Sbjct: 7   QQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIP 66

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 405
           SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGC 112

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  171 bits (434), Expect = 3e-43
 Identities = 78/82 (95%), Positives = 80/82 (97%)
 Frame = +1

Query: 163 GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 342
           GGR+TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 4   GGRVTMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 63

Query: 343 AKNRELEVIHSRWAMLGALGCV 408
           A+NRELEVIH RWAMLGALGCV
Sbjct: 64  ARNRELEVIHCRWAMLGALGCV 85

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  170 bits (430), Expect = 8e-43
 Identities = 82/107 (76%), Positives = 91/107 (85%), Gaps = 3/107 (2%)
 Frame = +1

Query: 97  QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 267
           Q ++F G    +  ++LV  +G  GG R++MRRTVKSAP SIWYGPDRPKYLGPFS+Q P
Sbjct: 7   QQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIP 66

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 113

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  150 bits (380), Expect = 5e-37
 Identities = 75/91 (82%), Positives = 78/91 (85%), Gaps = 5/91 (5%)
 Frame = +1

Query: 151 VGDFG-GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 315
           VG FG GRITMR+TV     +A  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA
Sbjct: 20  VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 79

Query: 316 GLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           GLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 80  GLSADPETFAKNRELEVIHSRWAMLGALGCV 110

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  149 bits (376), Expect = 2e-36
 Identities = 76/103 (73%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = +1

Query: 106 SFLGTAPRRDDLVRSVGDFGGRITMRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLT 279
           SF G A +       +    GRITMR+ V KSAP S  WYGPDR KYLGPFS ++PSYLT
Sbjct: 12  SFAGQAVKLSPSASEISG-NGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 280 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 113

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  148 bits (374), Expect = 3e-36
 Identities = 69/82 (84%), Positives = 74/82 (90%), Gaps = 1/82 (1%)
 Frame = +1

Query: 166 GRITMRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 342
           GR++MR+TVK+    S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 31  GRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 90

Query: 343 AKNRELEVIHSRWAMLGALGCV 408
           AKNRELEVIHSRWAMLGALGCV
Sbjct: 91  AKNRELEVIHSRWAMLGALGCV 112

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  145 bits (366), Expect = 2e-35
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 2/83 (2%)
 Frame = +1

Query: 166 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 339
           GR++MR+TV    A  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 31  GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET 90

Query: 340 FAKNRELEVIHSRWAMLGALGCV 408
           FAKNRELEVIH RWAMLGALGCV
Sbjct: 91  FAKNRELEVIHCRWAMLGALGCV 113

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  144 bits (364), Expect = 4e-35
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 2/83 (2%)
 Frame = +1

Query: 166 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 339
           GR++MR+TV    +  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 29  GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 88

Query: 340 FAKNRELEVIHSRWAMLGALGCV 408
           FAKNRELEVIHSRWAMLGALGCV
Sbjct: 89  FAKNRELEVIHSRWAMLGALGCV 111

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  144 bits (364), Expect = 4e-35
 Identities = 68/85 (80%), Positives = 73/85 (85%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G++TMR+TV  A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  144 bits (363), Expect = 5e-35
 Identities = 68/85 (80%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           GR+TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  144 bits (362), Expect = 6e-35
 Identities = 68/84 (80%), Positives = 73/84 (86%), Gaps = 3/84 (3%)
 Frame = +1

Query: 166 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 336
           GR+TMR+TV   K    S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 31  GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 90

Query: 337 TFAKNRELEVIHSRWAMLGALGCV 408
           TFA+NRELEVIHSRWAMLGALGCV
Sbjct: 91  TFARNRELEVIHSRWAMLGALGCV 114

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  144 bits (362), Expect = 6e-35
 Identities = 68/84 (80%), Positives = 73/84 (86%), Gaps = 3/84 (3%)
 Frame = +1

Query: 166 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 336
           GR+TMR+TV   K    S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 31  GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 90

Query: 337 TFAKNRELEVIHSRWAMLGALGCV 408
           TFA+NRELEVIHSRWAMLGALGCV
Sbjct: 91  TFARNRELEVIHSRWAMLGALGCV 114

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  144 bits (362), Expect = 6e-35
 Identities = 73/107 (68%), Positives = 80/107 (74%), Gaps = 4/107 (3%)
 Frame = +1

Query: 100 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 267
           ++SF G A       +  G+  G+ TMR+TV  A      S WYGPDR KYLGPFS + P
Sbjct: 10  SSSFAGKAVNVPSSSQITGN--GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 68  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 114

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  143 bits (361), Expect = 8e-35
 Identities = 67/83 (80%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 339
           GR++MR+T      S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 11  GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 70

Query: 340 FAKNRELEVIHSRWAMLGALGCV 408
           FAKNRELEVIHSRWAMLGALGCV
Sbjct: 71  FAKNRELEVIHSRWAMLGALGCV 93

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  143 bits (361), Expect = 8e-35
 Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  143 bits (361), Expect = 8e-35
 Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 30  GKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 90  ETFAKNRELEVIHCRWAMLGALGCV 114

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  143 bits (361), Expect = 8e-35
 Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 30  GKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 90  ETFAKNRELEVIHCRWAMLGALGCV 114

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  143 bits (360), Expect = 1e-34
 Identities = 68/86 (79%), Positives = 74/86 (86%), Gaps = 5/86 (5%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 330
           GRITMR+T    P+++     WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 89

Query: 331 PETFAKNRELEVIHSRWAMLGALGCV 408
           PETFAKNRELEVIH RWAMLGALGCV
Sbjct: 90  PETFAKNRELEVIHCRWAMLGALGCV 115

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  142 bits (359), Expect = 1e-34
 Identities = 71/107 (66%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +1

Query: 100 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTP 267
           ++SF G A +       +    G++TMR+TV  A      S WYGPDR KYLGPFS + P
Sbjct: 10  SSSFAGKAVKLSSSSSEITG-NGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAP 68

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 69  SYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 115

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  142 bits (358), Expect = 2e-34
 Identities = 69/93 (74%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
 Frame = +1

Query: 133 DDLVRSVGDFGGRITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 309
           ++L R VG    R+ M      AP  SIWYG DRP YLGPFS   PSYL+GEFPGDYGWD
Sbjct: 21  NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80

Query: 310 TAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           TAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCV 113

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  142 bits (357), Expect = 2e-34
 Identities = 68/95 (71%), Positives = 79/95 (83%), Gaps = 3/95 (3%)
 Frame = +1

Query: 133 DDLVRSV-GDFGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYG 303
           ++L R V G+   R+TMRRTV  +  S  IWYG DRPK+LGPFS +TPSYL GEF GDYG
Sbjct: 22  NELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYG 81

Query: 304 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           WDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+
Sbjct: 82  WDTAGLSSDPETFARNRELEVIHARWAMLGALGCL 116



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 244 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           GP  E T P Y  G F      D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 182 GPLGEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  142 bits (357), Expect = 2e-34
 Identities = 66/85 (77%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G++TMR+T   A      S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  142 bits (357), Expect = 2e-34
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 2/83 (2%)
 Frame = +1

Query: 166 GRITMRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 339
           GR+TMR+TVK + P  S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 31  GRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 90

Query: 340 FAKNRELEVIHSRWAMLGALGCV 408
           FA+NRELEVIH RWAMLGALGCV
Sbjct: 91  FARNRELEVIHCRWAMLGALGCV 113

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  141 bits (355), Expect = 4e-34
 Identities = 67/85 (78%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G+ TMR+T   A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  141 bits (355), Expect = 4e-34
 Identities = 66/86 (76%), Positives = 73/86 (84%), Gaps = 4/86 (4%)
 Frame = +1

Query: 163 GGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 330
           G R TMR++  +    +  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 90

Query: 331 PETFAKNRELEVIHSRWAMLGALGCV 408
           PETF+KNRELEVIHSRWAMLGALGCV
Sbjct: 91  PETFSKNRELEVIHSRWAMLGALGCV 116

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  140 bits (354), Expect = 5e-34
 Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
 Frame = +1

Query: 169 RITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 342
           + TMR+T   +  S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 22  KFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 81

Query: 343 AKNRELEVIHSRWAMLGALGCV 408
           AKNRELEVIHSRWAMLGALGCV
Sbjct: 82  AKNRELEVIHSRWAMLGALGCV 103

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  140 bits (354), Expect = 5e-34
 Identities = 71/110 (64%), Positives = 81/110 (73%), Gaps = 7/110 (6%)
 Frame = +1

Query: 100 TTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSE 258
           ++SF G A   P   ++ R+     G++TMR+TV  A      S WYGPDR KYLGPFS 
Sbjct: 10  SSSFAGKAVNVPSSSEITRN-----GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSG 64

Query: 259 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           + PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLGALGCV
Sbjct: 65  EAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCV 114

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  140 bits (353), Expect = 7e-34
 Identities = 72/101 (71%), Positives = 78/101 (77%), Gaps = 6/101 (5%)
 Frame = +1

Query: 124 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 285
           P+ + L+   G  G  R+TMR+    KS   SI   WYGPDR  YLGPFS + PSYLTGE
Sbjct: 26  PQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGE 85

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 86  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 126

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  140 bits (353), Expect = 7e-34
 Identities = 67/85 (78%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G+  MR+TV  A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  140 bits (352), Expect = 9e-34
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +1

Query: 169 RITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 345
           R++MR+T  +    S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32  RVSMRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 91

Query: 346 KNRELEVIHSRWAMLGALGCV 408
           KNRELEVIH RWAMLGALGCV
Sbjct: 92  KNRELEVIHGRWAMLGALGCV 112

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  140 bits (352), Expect = 9e-34
 Identities = 72/101 (71%), Positives = 78/101 (77%), Gaps = 6/101 (5%)
 Frame = +1

Query: 124 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 285
           P+ + L+   G  G  R+TMR+    KS   SI   WYGPDR  YLGPFS + PSYLTGE
Sbjct: 26  PQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGE 85

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 86  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 126

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  139 bits (351), Expect = 1e-33
 Identities = 67/85 (78%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           G+ TMR+TV  A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA LSADP
Sbjct: 31  GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADP 90

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCV 115

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  139 bits (349), Expect = 2e-33
 Identities = 65/84 (77%), Positives = 72/84 (85%), Gaps = 4/84 (4%)
 Frame = +1

Query: 169 RITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 336
           R TMR++  +    +  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 34  RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93

Query: 337 TFAKNRELEVIHSRWAMLGALGCV 408
           TF+KNRELEVIHSRWAMLGALGCV
Sbjct: 94  TFSKNRELEVIHSRWAMLGALGCV 117

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  137 bits (346), Expect = 5e-33
 Identities = 66/85 (77%), Positives = 69/85 (81%), Gaps = 5/85 (5%)
 Frame = +1

Query: 169 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           R+TMR+T   A       S WYGPDR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  RVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 89  ETFAKNRELEVIHSRWAMLGALGCV 113

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  137 bits (345), Expect = 6e-33
 Identities = 70/107 (65%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
 Frame = +1

Query: 100 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 267
           ++SF G A +       +GD   R+ MR+T   A Q    S WYG DR  YLGP S + P
Sbjct: 10  SSSFAGKAVKNLPSSALIGD--ARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPP 67

Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 68  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 114

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  136 bits (343), Expect = 1e-32
 Identities = 67/104 (64%), Positives = 71/104 (68%)
 Frame = +1

Query: 97  QTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 276
           + T FLG     + L   V     R TM          +WYGPDR KYLGPFS QTPSYL
Sbjct: 15  KATPFLGQTKNANPLRDVVAMGSARFTMSN-------DLWYGPDRVKYLGPFSAQTPSYL 67

Query: 277 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
            GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+
Sbjct: 68  NGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI 111



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  136 bits (342), Expect = 1e-32
 Identities = 66/85 (77%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           GRITMR++      +A  S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 25  GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 84

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 85  ETFAKNRELEVIHSRWAMLGALGCV 109

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  135 bits (341), Expect = 2e-32
 Identities = 65/85 (76%), Positives = 68/85 (80%), Gaps = 5/85 (5%)
 Frame = +1

Query: 169 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           R+TMR+T   A       S WYGPDR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  RVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWAMLGALGCV
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCV 113



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 244 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           GP  E   P Y  G F      D  GL+ DPE F + +  E+   R AML   G
Sbjct: 179 GPLGEVVDPLYPGGSF------DPLGLADDPEAFGELKVKELKKGRLAMLSMFG 226

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  135 bits (341), Expect = 2e-32
 Identities = 65/85 (76%), Positives = 68/85 (80%), Gaps = 5/85 (5%)
 Frame = +1

Query: 169 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           R+TMR+        SA  S WYGPDR  YLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 38  RVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 97

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           E FAKNRELEVIH RWAMLGALGCV
Sbjct: 98  ENFAKNRELEVIHCRWAMLGALGCV 122

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  134 bits (337), Expect = 5e-32
 Identities = 63/81 (77%), Positives = 65/81 (80%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 345
           GRITM          +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA
Sbjct: 41  GRITMGN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 93

Query: 346 KNRELEVIHSRWAMLGALGCV 408
           +NR LEVIH RWAMLGALGCV
Sbjct: 94  RNRALEVIHGRWAMLGALGCV 114



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  134 bits (336), Expect = 7e-32
 Identities = 65/85 (76%), Positives = 69/85 (81%), Gaps = 5/85 (5%)
 Frame = +1

Query: 169 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           RITMR+T       ++  S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 89  ETFAKNRELEVIHSRWAMLGALGCV 113

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  133 bits (335), Expect = 9e-32
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = +1

Query: 196 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 375
           ++  S W+GPD  KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 6   ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 65

Query: 376 RWAMLGALGCV 408
           RWAMLGALGCV
Sbjct: 66  RWAMLGALGCV 76

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  123 bits (309), Expect = 9e-29
 Identities = 62/85 (72%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
 Frame = +1

Query: 166 GRITMRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 333
           GRITMR+T  K  P    S WYG DR  YLGP S   PSYLTGEFPGDYGWDT GLSADP
Sbjct: 28  GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADP 87

Query: 334 ETFAKNRELEVIHSRWAMLGALGCV 408
           ETFAKNRELEVIH RWA+   LGCV
Sbjct: 88  ETFAKNRELEVIHCRWAIAVGLGCV 112

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  123 bits (309), Expect = 9e-29
 Identities = 54/63 (85%), Positives = 58/63 (92%)
 Frame = +1

Query: 214 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 393
           WYGPDR K+LGPFS  TP+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH+RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 394 ALG 402
           ALG
Sbjct: 99  ALG 101



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  117 bits (292), Expect = 8e-27
 Identities = 55/74 (74%), Positives = 65/74 (87%), Gaps = 4/74 (5%)
 Frame = +1

Query: 196 SAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 363
           +AP+S    +YGP+R K+LGP+SE  TP+YLTGEFPGDYGWDTAGLSADPETF + RELE
Sbjct: 27  AAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELE 86

Query: 364 VIHSRWAMLGALGC 405
           +IH+RWAMLGALGC
Sbjct: 87  LIHARWAMLGALGC 100



 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG+  +D  GL+ DP+TFA+ +  E+ + R A     G
Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFG 214

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  116 bits (290), Expect = 1e-26
 Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
 Frame = +1

Query: 169 RITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPET 339
           R T ++ + + P++   +YGPDR K+LGPFSE  TP YLTGEFPGDYGWDTAGLSADP+T
Sbjct: 16  RQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQT 75

Query: 340 FAKNRELEVIHSRWAMLGALG 402
           FA+ RE+E+IH+RWA+LGALG
Sbjct: 76  FARYREIELIHARWALLGALG 96



 Score = 31.2 bits (69), Expect = 0.61
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  113 bits (283), Expect = 9e-26
 Identities = 59/86 (68%), Positives = 66/86 (76%), Gaps = 5/86 (5%)
 Frame = +1

Query: 166 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 330
           GR++MR+T   AP+++     WYGPDR KYLGPFS + PSYLTGEF G        LSAD
Sbjct: 30  GRVSMRKT---APKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSAD 78

Query: 331 PETFAKNRELEVIHSRWAMLGALGCV 408
           PETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 79  PETFAKNRELEVIHSRWAMLGALGCV 104

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  110 bits (275), Expect = 8e-25
 Identities = 50/54 (92%), Positives = 51/54 (94%)
 Frame = +1

Query: 247 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           PFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGCV
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCV 54

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  108 bits (270), Expect = 3e-24
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +1

Query: 229 RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           R KYLGPFS + PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIHSR AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 42/71 (59%), Positives = 49/71 (69%)
 Frame = +1

Query: 196 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 375
           S+  + +YGPD          Q P   TGEFPGDYGWDTAGLSADPETF + RELE+IH+
Sbjct: 51  SSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 109

Query: 376 RWAMLGALGCV 408
           R  +LGALG V
Sbjct: 110 RCGLLGALGMV 120



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
 Frame = +1

Query: 214 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 384
           WYGPDR  +L        + P YL GE  GDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 385 MLGALGCV 408
           MLGA G +
Sbjct: 122 MLGAAGFI 129

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 29/60 (48%), Positives = 38/60 (63%)
 Frame = +1

Query: 223 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           PDRP +        P +L G  PGD+G+D  GL +DPE+   N + E++HSRWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = +1

Query: 223 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           PDRP +        P +L G  PGD+G+D  GL++DPE+   N++ E++H RWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 120

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = +1

Query: 259 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           + P+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+
Sbjct: 195 EPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCI 244



 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +1

Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGAL 59



 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = +1

Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           P YLTGE  GD G+D AGL+ADP TF + +  EV H R +ML  +GC+
Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCL 428

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 29/69 (42%), Positives = 36/69 (52%)
 Frame = +1

Query: 196 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 375
           +AP+  W     P   G  +   P +L G  PGD+G+D  GL  DP      RE E+IH 
Sbjct: 54  AAPKKSWI----PAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHG 109

Query: 376 RWAMLGALG 402
           RWAML  LG
Sbjct: 110 RWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +1

Query: 163 GGRITMRR--TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 336
           GG  T +R   + +A +  W     P   G  +   P +L G  PGDYG+D  GL  DP 
Sbjct: 36  GGAATPKRFTVLAAAAKKSWI----PAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 337 TFAKNRELEVIHSRWAMLGALG 402
                RE E+IH RWAM   LG
Sbjct: 92  FLKWYREAELIHGRWAMAAVLG 113

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = +1

Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           PSYL G  PGD+G+D+ GL   P    + +E E+IH RWAML   G +
Sbjct: 56  PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGII 103

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +1

Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 22/50 (44%), Positives = 34/50 (68%)
 Frame = +1

Query: 259 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 408
           Q P++LTGE+P D G+D   ++ADP  +A+ R  EV H+R +ML  +G +
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSI 216

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 22/47 (46%), Positives = 29/47 (61%)
 Frame = +1

Query: 262 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G
Sbjct: 63  SPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAG 109

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
 Frame = +1

Query: 253 SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCV 408
           S+Q+ SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+AMLGA G +
Sbjct: 59  SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAI 115

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 30/104 (28%), Positives = 36/104 (34%), Gaps = 43/104 (41%)
 Frame = +1

Query: 226 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------- 351
           DRP +      ++P YL G   GDYG+D  GL    E             AKN       
Sbjct: 51  DRPLWFP--GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIG 108

Query: 352 -------------------------RELEVIHSRWAMLGALGCV 408
                                    RE E+IH RWAML  LG +
Sbjct: 109 TRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAI 152



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG   +D  GL++DP   A+ +  E+ H+R AM+G LG
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 280 GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHSRWAMLGALG 402
           G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G
Sbjct: 146 GYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAG 187

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 402
           +PG   +D  GL+ADPE  A+ +  E+ H+R AM+  LG
Sbjct: 217 YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 34.7 bits (78), Expect = 0.055
 Identities = 35/116 (30%), Positives = 42/116 (36%), Gaps = 44/116 (37%)
 Frame = +1

Query: 193 KSAPQSIWYGPDRPK-YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE----------- 336
           KSA +++    DRP  Y G  S   P +L G   GDYG+D  GL    E           
Sbjct: 45  KSAKKTVT--TDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQ 99

Query: 337 TFAKN--------------------------------RELEVIHSRWAMLGALGCV 408
             AKN                                RE E+IH RWAML  LG +
Sbjct: 100 NLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGAL 155

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 27/93 (29%), Positives = 31/93 (33%), Gaps = 45/93 (48%)
 Frame = +1

Query: 265 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 351
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 352 --------------RELEVIHSRWAMLGALGCV 408
                         RE E+IH RWAML  LG +
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGAL 151

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +1

Query: 352 RELEVIHSRWAMLGALGCV 408
           RE E+IH RWAMLG LG +
Sbjct: 138 RECELIHGRWAMLGTLGAI 156



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 399
           +PG Y +D  GL+ADPE     +  E+ HSR AM+  L
Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>FTSZ_AGRTU (O30992) Cell division protein ftsZ|
          Length = 583

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 19/130 (14%)
 Frame = -3

Query: 408 HAPEGSEHRPPRVDHLQLPVLGEGLWVSRQSRGV--------PPVVAGELAGQVR-RGLL 256
           HAPE      PR+   Q PV  E   V RQ   V        PPVV  E+  + R   + 
Sbjct: 437 HAPEQVAVPAPRMQQAQAPVYQEPAPVGRQPEPVRMPKVEDFPPVVKAEMDHRDRATPVA 496

Query: 255 GERAQVLGTVRAVPDALGR---------ALDGPAHGXXXXXXXXXXXXVIAP-RGGAEEA 106
            E    +G ++ + ++LGR          +D P+              + AP RG  ++ 
Sbjct: 497 QEERGPMGLLKRITNSLGRREEEEVPSDMMDAPSMAPQRRAPLSPEASLYAPRRGQLDDH 556

Query: 105 GRLVQRRRGH 76
           GR       H
Sbjct: 557 GRATPSSSSH 566

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>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast|
           precursor
          Length = 212

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 304 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 402
           WD  GL   AD E F + R +E+ H R AML  +G
Sbjct: 49  WDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVG 83

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>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast|
           precursor (Fragment)
          Length = 182

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 304 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 402
           WD  GL   AD E F + R +EV H R AML   G
Sbjct: 19  WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 53

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>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast|
           precursor
          Length = 217

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 304 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 402
           WD  GL   AD E F + R +EV H R AML   G
Sbjct: 54  WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 88

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>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast|
           precursor (Fragment)
          Length = 211

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 304 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 402
           WD  GL   AD E F + R +EV H R AML   G
Sbjct: 48  WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 82

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>MCPH1_HUMAN (Q8NEM0) Microcephalin|
          Length = 835

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 167 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 48
           PPK    R RS+RR  +PR  +  C ++  +  VAG A E
Sbjct: 366 PPKEKCKRKRSTRRSIMPR--LQLCRSEGRLQHVAGPALE 403

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>GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 139 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 297
           LV + G   G + +   + + P  I  G   PK+LG     TPS+L  + P D
Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218

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>GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 139 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 297
           LV + G   G + +   + + P  I  G   PK+LG     TPS+L  + P D
Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218

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>ACK2_BOVIN (O02742) Activated CDC42 kinase 2 (EC 2.7.10.2) (ACK-2)|
          Length = 747

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = -3

Query: 363 LQLPVLGEGLWVSRQSRGVPPVVAGELAGQVRRGLLGERAQVLGTVRAVPDALGRALD 190
           L+ P L  GLW+++ S  VP   AG   G+V     GE   V       P     A+D
Sbjct: 552 LRKPGLPRGLWLAKPSARVPGTKAGRGGGEVTLIDFGEEPVVPAPRPCAPSLAQLAMD 609

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>RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 235

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 8/118 (6%)
 Frame = -3

Query: 408 HAPEGSEHRPPRVDHLQLPVLGEGLW----VSRQSRGVPPVVAGEL----AGQVRRGLLG 253
           H    +EH   R +  +L  LG+ +      +      P +  GEL    A  V    L 
Sbjct: 34  HTTYANEHPRARANE-RLEFLGDSVLGMVIAAHLYERYPDLPEGELTKIRAAVVCEPSLA 92

Query: 252 ERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIAPRGGAEEAGRLVQRRRG 79
           ERA+VLG  R +    G A+ G                 +   GG E A R V R  G
Sbjct: 93  ERARVLGIGRHMRFGRGEAVSGRDRDSTLSDAFEAVVGALYLDGGLEAAQRFVLRELG 150

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>MCPH1_MACFA (Q5IFK1) Microcephalin|
          Length = 842

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 167 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 48
           PPK    R RS RR  +PR  +  C ++ ++  +AG A E
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQCMAGPALE 403

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>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 47  ARRQPQPPAKWPRRRC---TRRPASSAPPR 127
           A RQP PP   P RR    + RP S +PPR
Sbjct: 67  ASRQPWPPLPTPLRRTSSRSSRPPSPSPPR 96

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>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast|
           precursor
          Length = 217

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 304 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 402
           WD  GL   AD + F + R +EV H R AML   G
Sbjct: 54  WDPLGLLADADQDGFERLRYVEVKHGRIAMLAIAG 88

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>MCPH1_PANTR (P61593) Microcephalin|
          Length = 835

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 167 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 48
           PPK    R RS RR  +PR  +  C ++  +  VAG A E
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGRLQHVAGPALE 403

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>MCPH1_PONPY (P61594) Microcephalin|
          Length = 839

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 167 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 48
           PPK    R RS RR  +PR  +  C ++ ++  VAG A +
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQHVAGPALQ 403

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>MCPH1_COLGU (P61590) Microcephalin|
          Length = 841

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 167 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 48
           PPK    R RS RR  +PR  +  CS++ +   +AG A E
Sbjct: 365 PPKEKCKRKRSIRRSIMPR--LQLCSSEGSRQHMAGPALE 402

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>GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose transporter|
           member 6 (Glucose transporter type 6) (Glucose
           transporter type 9)
          Length = 507

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 294 AGELAGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHG 175
           AG L+  +   LLG +  ++ +  AVP A G AL   AHG
Sbjct: 94  AGGLSAMILNDLLGRKLSIMFS--AVPSAAGYALMAGAHG 131

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>PIV6_ADES1 (Q8JN68) Minor capsid protein 6 precursor (Minor capsid protein VI)|
           [Contains: Protease cofactor]
          Length = 223

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 33/98 (33%), Positives = 40/98 (40%)
 Frame = -3

Query: 309 VPPVVAGELAGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIA 130
           VPP+V G   GQ+       R +VL   R V  ALG  ++ P                 A
Sbjct: 149 VPPLVTGVRPGQM-------RPEVLPPDRGV--ALGPLIEEP-----------------A 182

Query: 129 PRGGAEEAGRLVQRRRGHFAGGWGCLRAQ*DQLEDGVC 16
           PR  A    R  +R+R     GWG   A  D L DGVC
Sbjct: 183 PRPIAVPGSRPRKRKR---VRGWG--SALEDMLGDGVC 215

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>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)|
           (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24
           (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein
           VP22A; C-terminal peptide]
          Length = 605

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -1

Query: 266 GVCSENGPRYLGRSGPYQMLWGALLTVRRMVMRPPKSPT 150
           G C + GP Y   SGPY         V R V  PP  PT
Sbjct: 470 GYCPQQGPCYT-HSGPYGFQPHQSYEVPRYVPHPPPPPT 507

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>PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a (OsPIN3a)|
          Length = 618

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 170 RPPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAG 60
           RPPK P   T +    A    + VW S+ + +S V+G
Sbjct: 301 RPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSG 337

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>HBL1_CAEEL (Q9XYD3) Hunchback-like protein|
          Length = 982

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 220 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 357
           G + P++LGPF   + + LT + PG+      G  +  E   K+ E
Sbjct: 65  GSEIPQHLGPFGNSSLTMLTAQQPGEKIHPDGGYVSPKEDGRKSSE 110

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>LGRC_BREPA (Q70LM5) Linear gramicidin synthetase subunit C [Includes:|
            ATP-dependent valine adenylase (ValA) (Valine activase);
            ATP-dependent D-valine adenylase (D-ValA) (D-valine
            activase); Valine racemase [ATP-hydrolyzing] (EC
            5.1.1.-); ATP-dependent tr
          Length = 7756

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 209  LWGALLTVRRMVMRPPKSPTL 147
            +WGALL   ++V+ PP  P+L
Sbjct: 1735 IWGALLNGAKLVLMPPDLPSL 1755



 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 209 LWGALLTVRRMVMRPPKSPTL 147
           +WGALL   ++V+ PP  P+L
Sbjct: 670 IWGALLNGAKLVLMPPDLPSL 690

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>DUT_HHV11 (P10234) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC|
           3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 371

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
 Frame = -3

Query: 234 GTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIAPRGGAEEAGRLVQRRRGHFA----- 70
           G +   PD+LGR  DG  H              +A RGG      LV RR   F      
Sbjct: 7   GAILVQPDSLGRGYDGDWH------------TAVATRGGGVVQLNLVNRRAVAFMPKVSG 54

Query: 69  -GGWGCLRAQ*D 37
             GW   R   D
Sbjct: 55  DSGWAVGRVSLD 66

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>AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic subunit alpha-1|
           (EC 2.7.11.1) (AMPK alpha-1 chain)
          Length = 548

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 181 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 273
           R T+K   +  W+  D PKYL P   + PSY
Sbjct: 256 RATIKDIREHEWFKQDLPKYLFP---EDPSY 283

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>YG22_YEAST (P53235) Hypothetical 71.3 kDa protein in SCM4-MUP1 intergenic|
           region
          Length = 642

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = -1

Query: 176 VMRPPKSPTLRTRSSRRGAVPRKLVVWCSADAAIS 72
           ++ P + PT+ T +  +G  P +L++W  ++  I+
Sbjct: 188 LISPAEHPTICTFTPEKGGKPAQLIIWALSEGKIT 222

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>ASB13_MOUSE (Q8VBX0) Ankyrin repeat and SOCS box protein 13 (ASB-13)|
          Length = 278

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +1

Query: 91  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 270
           LH+T        +  DL+  + +FGG I  R      P    +    P     + E+TP 
Sbjct: 181 LHETALHHAAKVKNVDLIEMLIEFGGNIYARDNRGKKPSDYTWSSSAPAKCFEYYEKTPL 240

Query: 271 YLT 279
            L+
Sbjct: 241 SLS 243

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>ASB13_HUMAN (Q8WXK3) Ankyrin repeat and SOCS box protein 13 (ASB-13)|
          Length = 278

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +1

Query: 91  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 270
           LH+T        +  DL+  + +FGG I  R      P    +    P     + E+TP 
Sbjct: 181 LHETALHHAAKVKNVDLIEMLIEFGGNIYARDNRGKKPSDYTWSSSAPAKCFEYYEKTPL 240

Query: 271 YLT 279
            L+
Sbjct: 241 TLS 243

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>G6PIB_ORYSA (P42863) Glucose-6-phosphate isomerase, cytosolic B (EC 5.3.1.9)|
           (GPI-B) (Phosphoglucose isomerase B) (PGI-B)
           (Phosphohexose isomerase B) (PHI-B)
          Length = 567

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 238 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 375
           ++G    Q P YL GE   ++    +   A P+  A  +  E +HS
Sbjct: 407 FIGVVKSQQPVYLKGEIVSNHDELMSNFFAQPDALAYGKTPEQLHS 452

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>G6PIA_ORYSA (P42862) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9)|
           (GPI-A) (Phosphoglucose isomerase A) (PGI-A)
           (Phosphohexose isomerase A) (PHI-A)
          Length = 567

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 238 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 375
           ++G    Q P YL GE   ++    +   A P+  A  +  E +HS
Sbjct: 407 FIGVVKSQQPVYLKGEIVSNHDELMSNFFAQPDALAYGKTPEQLHS 452

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>DHE4_SACBA (Q8TFF6) NADP-specific glutamate dehydrogenase 1 (EC 1.4.1.4)|
           (NADP-GDH 1) (NADP-dependent glutamate dehydrogenase 1)
          Length = 454

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 175 TMRRTVKSAPQSIWYGPDRPKYLG 246
           T R T  +  +S+WYGP +   LG
Sbjct: 353 TARATASTLKESVWYGPPKAANLG 376

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>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 277 TGEFPGDYGWDTAGLSADPET--FAKNRELEVIHSRWAMLGALGCV 408
           +G F G   WD   L+A        + RE E+ H R AML ALG V
Sbjct: 67  SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFV 110

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>GCST_STRAW (Q82JI2) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage|
           system T protein)
          Length = 372

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 393 SEHRPPRVDHLQLPVLGEGLWVSRQSRGVPPVVAGELAGQVRRG 262
           +E  PPRV    + ++ EG  V R   G P VV GE+ G+V  G
Sbjct: 284 AEKNPPRV---LVGLIAEGRRVPRA--GYPVVVGGEVIGEVTSG 322

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>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking|
           protein) (P41)
          Length = 369

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 292 GDYGWDTAGLSADPETFAKNRELEVI 369
           G YG D A ++ D  +FAK+R ++V+
Sbjct: 234 GKYGADPASVAFDAISFAKSRNIDVV 259

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>AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic subunit alpha-1|
           (EC 2.7.11.1) (AMPK alpha-1 chain)
          Length = 550

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 181 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 273
           R T+K   +  W+  D PKYL P   + PSY
Sbjct: 258 RATIKDIREHEWFKQDLPKYLFP---EDPSY 285

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>AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic subunit alpha-1|
           (EC 2.7.11.1) (AMPK alpha-1 chain)
          Length = 550

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 181 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 273
           R T+K   +  W+  D PKYL P   + PSY
Sbjct: 258 RATIKDIREHEWFKQDLPKYLFP---EDPSY 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,854,850
Number of Sequences: 219361
Number of extensions: 1062390
Number of successful extensions: 3803
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 3656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3789
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result