ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 44 7e-05
214KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 42 5e-04
3HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 39 0.004
4CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 37 0.009
5XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... 28 5.3

>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 22/48 (45%), Positives = 25/48 (52%)
 Frame = +3

Query: 252 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCT 395
           D LKLGAC +                   CC LLGGL DL+AA+CLCT
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCT 309



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>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 23/48 (47%), Positives = 25/48 (52%)
 Frame = +3

Query: 252 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCT 395
           D LKLG CA+                   CCSLL GL +LEAAVCLCT
Sbjct: 57  DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCT 102



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 333 DKCCSLLGGLADLEAAVCLC 392
           D CC+L+GGL D+EA VCLC
Sbjct: 26  DDCCALIGGLGDIEAIVCLC 45



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 252 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCT 395
           D LKL  CA                  ++CC LL GL DL+AA+CLCT
Sbjct: 51  DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCT 93



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>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase|
           B) (1,4-beta-D-xylan xylanohydrolase B)
          Length = 592

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +3

Query: 27  TTSASQLKQPGAMAPRTFSAACLLALLVANTFLAGDAC 140
           T SAS  + PG    RT +  C+   L A  F A  AC
Sbjct: 2   TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,426,884
Number of Sequences: 219361
Number of extensions: 232279
Number of successful extensions: 856
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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