ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 75 4e-14
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 57 9e-09
314KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 51 6e-07
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 32 0.51

>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = +1

Query: 148 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADPDAALCLCTTIKAKALNVSL 327
           CP+D LKL ACVD               +TCCPLL G+ D DAA+CLCTTI+ K LN+++
Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINI 320

Query: 328 VLP 336
           +LP
Sbjct: 321 ILP 323



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 29/63 (46%), Positives = 33/63 (52%)
 Frame = +1

Query: 148 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADPDAALCLCTTIKAKALNVSL 327
           CP+D LKL  C                 E CCPLL G+ D DAALCLCT IKA  L + L
Sbjct: 48  CPIDALKLKVCAKVLGLVKVGLPQY---EQCCPLLEGLVDLDAALCLCTAIKANVLGIHL 104

Query: 328 VLP 336
            +P
Sbjct: 105 NVP 107



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>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 26/63 (41%), Positives = 32/63 (50%)
 Frame = +1

Query: 148 CPVDVLKLVACVDXXXXXXXXXXXXXXSETCCPLLSGVADPDAALCLCTTIKAKALNVSL 327
           CP D LKL  C D              +  CC LL G+ + +AA+CLCT IKA  L  +L
Sbjct: 54  CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNL 113

Query: 328 VLP 336
            LP
Sbjct: 114 NLP 116



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +1

Query: 232 ETCCPLLSGVADPDAALCLCTTIKAKAL-----NVSLVL 333
           + CC L+ G+ D +A +CLC  ++A  +     N+ L+L
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLIL 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,321,837
Number of Sequences: 219361
Number of extensions: 189186
Number of successful extensions: 358
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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